Li Song's Homepage
Johns Hopkins University
Computer Science Department
Email: lsong10@jhu.edu
Research Interest:
- Computational biology
- Algorithms
- Parallel Computing
Education Background:
- BS: Computer Science & Technology, Tongji University. Shanghai, CHINA. 2005~2009
- MS/Phd: Computer Science, Michigan Technological University. 2009~2012
- Phd: Computer Science, Johns Hopkins University. 2012~present
Softwares:
CLASS: Constraint-based Local Assembly and Selection of Splice variants
PsiCLASS: Reference-based Transcriptome Assembler for Single or Multiple RNA-seq Samples
Lighter: Fast and Memory-efficient Sequencing Error Correction without Counting
Rcorrector: Efficient and Accurate Error Correction for Illumina RNA-seq Reads
Rascaf: Scaffolding with RNA-seq read alignment