Prediction.h

// Copyright (c) 2003, The Institute for Genomic Research (TIGR), Rockville,
// Maryland, U.S.A.  All rights reserved.
#ifndef PREDICTION_H
#define PREDICTION_H

#include "SeqLoc.h"
#include "AnnotationScore.h"
#include <dsu.h>
#include <list>

class RegionPrediction;

class Prediction : public SeqLoc {
public:
  typedef std::list<Prediction*> DataStorageType;

  Prediction(const SeqLoc& sl, AnnotationScore d, int modelId, const string& str) : 
    SeqLoc(sl), _modelId(modelId), _source(str), _score(d) { }

  Prediction(const Prediction& pred) 
    : SeqLoc(pred), _modelId(pred._modelId), _source(pred._source), _score(pred._score) { }

  virtual ~Prediction() { }

  virtual void del() = 0;
  AnnotationScore getScore() const;

  void setScore(const AnnotationScore& s) { _score = s; }

  int getModelId() const { return _modelId; }

  const string& getDataSource() const { return _source; }

  virtual DataStorageType* makePlaceHolders() const  = 0;

  virtual void print(std::ostream& os, const string& str) const; 

private:
  int _modelId;
  string _source;
  AnnotationScore _score;
};

#endif // PREDICTION_H