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GeneModelType Class Reference

Purpose:
Interface - defines the behavior of an idividual exon model type. More...

#include <GeneModelType.h>

Inheritance diagram for GeneModelType:

Inheritance graph
[legend]
List of all members.

Public Member Functions

virtual void print (std::ostream &, const string &) const=0
virtual const string & getTypeStr () const=0
 Postcond:
returns a string identifier that identifies type (for printing)


virtual const int getScoreIdx () const=0
 Postcond:
returns a unique integer id representing the model type that can be
used to access a unique location in an array.



Detailed Description

Purpose:
Interface - defines the behavior of an idividual exon model type.

e.g Terminal, Initial, etc.
Important note that GeneModelTypes are really not used to improve gene prediction at the moment at the moment. Currently elements are considered coding, and model infromation is not used, if at sometime important information becomes available to incorporate gene model information, we'll be ready... interface


The documentation for this class was generated from the following file: