Drosophila Matrices

 

 3end - AAGGAG
 
A 0.72 0.85 -0.13 -0.14 1.28 -0.14
C -0.06 -0.13 -0.13 -0.09 -0.13 -0.13
G -0.11 -0.07 1.15 0.91 -0.07 0.97
T -0.09 0.05 -0.12 -0.07 -0.11 -0.10

 3end - AGAAGC
 
A 0.77 -0.14 0.59 1.16 -0.14 -0.14
C -0.13 -0.12 -0.03 -0.11 -0.12 1.19
G -0.13 1.00 -0.09 -0.09 1.18 -0.14
T -0.07 -0.10 -0.07 -0.07 -0.10 -0.11

 3end - AGAAGG
 
A 0.91 -0.14 0.82 1.05 -0.12 -0.14
C -0.13 -0.08 -0.05 -0.11 -0.13 -0.09
G -0.09 0.91 -0.13 -0.07 1.12 0.80
T -0.05 -0.10 -0.07 -0.01 -0.09 -0.10

 3end - AGCTGG
 
A 0.74 -0.14 -0.14 -0.14 -0.10 -0.14
C -0.13 -0.13 0.92 -0.12 -0.12 -0.05
G -0.12 0.78 -0.14 -0.11 1.55 0.75
T -0.03 -0.05 -0.11 1.49 -0.11 -0.12

 3end - AGGAGA
 
A 0.59 -0.11 -0.14 1.28 -0.12 0.74
C -0.13 -0.13 -0.09 -0.13 -0.11 -0.08
G -0.12 1.36 1.09 -0.07 0.72 -0.14
T 0.12 -0.11 -0.07 -0.11 -0.12 -0.11

 3end - AGGAGC
 
A 0.67 -0.14 -0.14 1.25 -0.14 -0.14
C -0.13 -0.13 -0.06 -0.12 -0.11 0.92
G -0.12 1.09 0.94 -0.09 1.06 -0.14
T 0.06 -0.11 -0.07 -0.10 -0.09 -0.10

 3end - CAAGAA
 
A -0.10 1.02 1.13 -0.14 0.72 0.96
C 1.53 -0.13 -0.11 -0.06 -0.12 -0.12
G -0.14 -0.13 -0.14 0.75 -0.05 -0.14
T -0.09 -0.09 -0.10 -0.11 -0.11 -0.07

 3end - CAAGGA
 
A -0.12 0.91 1.08 -0.14 -0.09 1.22
C 1.44 -0.12 -0.11 -0.10 -0.12 -0.13
G -0.14 -0.12 -0.11 0.78 0.75 -0.12
T -0.09 -0.07 -0.05 -0.10 -0.11 -0.12

 3end - CCAAGG
 
A -0.13 -0.10 1.47 1.05 -0.13 -0.09
C 0.76 1.60 -0.09 -0.13 -0.12 -0.13
G -0.14 -0.13 -0.14 -0.12 0.52 0.67
T -0.08 -0.09 -0.07 -0.09 -0.04 -0.11

 3end - CCACCA
 
A -0.14 -0.14 1.05 -0.10 -0.11 1.31
C 0.87 1.34 -0.07 0.36 0.98 -0.07
G -0.12 -0.14 -0.14 0.00 -0.13 -0.13
T -0.09 -0.11 -0.09 -0.11 -0.09 -0.12

 3end - CCTGGA
 
A -0.14 -0.13 -0.08 -0.10 -0.14 1.19
C 0.55 0.78 -0.11 -0.13 -0.06 -0.13
G -0.08 -0.11 -0.11 1.48 0.97 -0.12
T -0.06 -0.12 1.20 -0.10 -0.09 -0.11

 3end - CGAGAA
 
A -0.11 -0.04 1.31 -0.14 0.74 1.31
C 1.13 -0.09 -0.11 -0.12 -0.10 -0.11
G -0.10 0.57 -0.12 0.91 -0.09 -0.12
T -0.12 -0.09 -0.12 -0.12 -0.09 -0.11

 3end - CTGCAG
 
A -0.14 -0.14 -0.11 -0.14 1.13 -0.10
C 0.90 -0.12 -0.13 0.95 -0.13 -0.13
G -0.14 -0.12 1.21 -0.01 -0.11 0.83
T -0.10 1.46 -0.12 -0.04 -0.10 -0.12

 3end - CTGGAA
 
A -0.14 -0.13 -0.11 -0.13 1.13 0.54
C 0.90 -0.12 -0.13 0.00 -0.11 -0.12
G -0.12 -0.11 1.42 0.91 -0.13 -0.05
T -0.12 1.33 -0.11 -0.07 -0.09 -0.11

 3end - CTGGAC
 
A -0.14 -0.14 -0.08 -0.14 0.85 -0.12
C 0.78 -0.11 -0.12 -0.09 -0.09 0.50
G -0.11 -0.09 1.58 1.00 -0.14 -0.03
T -0.11 1.52 -0.09 -0.10 -0.12 -0.11

 3end - CTGGAG
 
A -0.13 -0.13 -0.10 -0.14 1.13 -0.12
C 0.68 -0.13 -0.13 0.00 -0.13 -0.12
G -0.11 -0.11 1.52 0.83 -0.09 0.78
T -0.11 1.33 -0.10 -0.04 -0.12 -0.11

 3end - GAGAAG
 
A -0.14 1.05 -0.12 0.77 1.31 -0.12
C -0.06 -0.13 -0.09 -0.04 -0.09 -0.13
G 0.83 -0.12 0.75 -0.13 -0.07 1.15
T -0.09 -0.11 -0.11 -0.07 -0.10 -0.11

 3end - GAGCAG
 
A -0.12 0.99 -0.14 -0.14 1.11 -0.13
C -0.05 -0.13 -0.13 1.13 -0.09 -0.12
G 0.70 -0.12 1.09 -0.13 -0.11 1.03
T -0.10 -0.06 -0.11 -0.04 -0.04 -0.12

 3end - GAGCTG
 
A -0.11 1.02 -0.14 -0.14 -0.09 -0.12
C -0.01 -0.13 -0.12 1.13 -0.11 -0.13
G 0.62 -0.11 0.91 -0.13 -0.12 1.27
T -0.09 -0.07 -0.07 -0.12 1.20 -0.12

 3end - GCCAAG
 
A -0.14 -0.12 -0.14 1.41 1.11 -0.13
C -0.13 1.01 1.34 -0.13 -0.12 -0.08
G 0.86 -0.13 -0.14 -0.13 -0.13 0.52
T -0.08 -0.12 -0.09 -0.07 -0.10 -0.08

 3end - GCTGGA
 
A -0.14 -0.14 -0.13 -0.10 -0.14 0.99
C -0.12 0.95 -0.13 -0.12 -0.01 -0.10
G 0.70 -0.13 -0.11 1.55 0.80 -0.13
T -0.06 -0.12 1.30 -0.09 -0.09 -0.11

 3end - GGACGA
 
A -0.12 -0.13 1.02 -0.13 0.01 1.41
C -0.12 -0.12 -0.12 0.70 -0.11 -0.13
G 1.00 1.18 -0.14 -0.10 0.52 -0.09
T -0.11 -0.10 -0.11 -0.11 -0.11 -0.11

 3end - GGAGAA
 
A -0.10 -0.14 1.16 -0.14 0.77 1.02
C -0.10 -0.05 -0.12 -0.08 -0.05 -0.12
G 1.15 1.03 -0.07 0.78 -0.14 -0.12
T -0.11 -0.07 -0.12 -0.12 -0.10 -0.06

 3end - GGAGCG
 
A -0.12 -0.14 1.41 -0.14 -0.14 -0.05
C -0.13 0.00 -0.12 -0.12 0.98 -0.13
G 1.21 0.78 -0.07 1.09 -0.13 0.29
T -0.12 -0.07 -0.12 -0.09 -0.09 0.00

 3end - GGAGCT
 
A -0.13 -0.14 1.25 -0.14 -0.11 -0.08
C -0.13 0.01 -0.13 -0.11 0.87 -0.13
G 1.15 0.78 -0.07 1.09 -0.12 -0.14
T -0.12 -0.07 -0.11 -0.10 -0.09 0.93

 3end - GGCCAA
 
A -0.14 -0.14 -0.11 -0.12 1.60 0.77
C -0.08 -0.13 0.95 1.37 -0.07 -0.13
G 0.59 0.89 -0.13 -0.14 -0.11 -0.13
T -0.06 -0.11 -0.12 -0.09 -0.09 -0.08

 3end - TGGAGC
 
A -0.13 -0.08 -0.14 1.08 -0.14 -0.10
C -0.13 -0.13 -0.04 -0.13 -0.13 0.57
G -0.11 1.36 0.97 -0.09 0.91 -0.10
T 1.33 -0.12 -0.07 -0.11 -0.10 -0.11

 5end - AAGAAG
 
A 0.86 0.97 -0.14 0.59 1.00 -0.12
C -0.13 -0.14 -0.11 -0.08 -0.12 -0.14
G -0.10 -0.11 1.03 -0.05 -0.09 1.18
T -0.09 -0.06 -0.11 -0.09 0.00 -0.12

 5end - AAGGAG
 
A 0.80 0.78 -0.11 -0.14 1.18 -0.14
C -0.10 -0.14 -0.14 -0.10 -0.14 -0.14
G -0.10 -0.07 1.09 1.03 -0.07 1.00
T -0.09 0.10 -0.11 -0.07 -0.09 -0.11

 5end - ACGAGG
 
A 0.75 -0.14 -0.05 1.21 -0.14 -0.13
C -0.14 0.97 -0.14 -0.12 -0.11 -0.12
G -0.14 -0.13 0.89 -0.07 0.91 1.06
T -0.05 -0.11 -0.07 -0.07 -0.01 -0.11

 5end - AGCAGC
 
A 0.62 -0.14 -0.14 0.86 -0.14 -0.14
C -0.14 -0.13 1.09 -0.11 -0.11 1.27
G -0.13 0.89 -0.11 -0.11 1.27 -0.13
T -0.01 -0.10 -0.04 0.06 -0.12 -0.12

 5end - AGCTGG
 
A 0.75 -0.13 -0.14 -0.14 -0.07 -0.14
C -0.13 -0.14 0.94 -0.12 -0.12 -0.06
G -0.13 0.72 -0.13 -0.09 1.58 0.75
T -0.03 -0.05 -0.12 1.59 -0.10 -0.12

 5end - AGGAGA
 
A 0.52 -0.09 -0.14 1.27 -0.13 0.65
C -0.13 -0.14 -0.12 -0.14 -0.13 -0.06
G -0.11 1.33 1.18 -0.07 0.86 -0.14
T 0.15 -0.12 -0.07 -0.11 -0.12 -0.11

 5end - AGGAGC
 
A 0.67 -0.13 -0.14 1.24 -0.14 -0.13
C -0.14 -0.14 -0.10 -0.13 -0.12 0.86
G -0.11 1.06 1.03 -0.07 1.12 -0.14
T 0.12 -0.10 -0.07 -0.09 -0.10 -0.11

 5end - AGGAGG
 
A 0.57 -0.12 -0.14 1.15 -0.13 -0.13
C -0.13 -0.14 -0.13 -0.14 -0.13 -0.06
G -0.07 1.06 1.21 -0.05 1.09 0.54
T 0.17 -0.11 -0.07 -0.07 -0.09 -0.11

 5end - CAACAA
 
A -0.12 0.97 0.50 -0.14 1.00 1.15
C 1.36 -0.13 -0.13 1.06 -0.13 -0.12
G -0.14 -0.14 -0.08 -0.10 -0.06 -0.13
T -0.07 -0.10 -0.06 -0.09 -0.10 -0.09

 5end - CAAGGA
 
A -0.14 0.94 1.06 -0.13 -0.10 1.27
C 1.24 -0.13 -0.13 -0.10 -0.12 -0.14
G -0.14 -0.10 -0.09 0.83 0.80 -0.11
T -0.09 -0.07 -0.03 -0.10 -0.10 -0.12

 5end - CAGCAA
 
A -0.13 0.75 -0.11 -0.12 1.09 1.09
C 1.24 -0.14 -0.13 1.45 -0.13 -0.13
G -0.13 -0.14 0.57 -0.14 -0.11 -0.14
T -0.09 0.00 -0.06 -0.07 -0.10 -0.11

 5end - CAGCAG
 
A -0.13 0.86 -0.14 -0.14 0.94 -0.10
C 0.94 -0.13 -0.13 1.12 -0.11 -0.13
G -0.10 -0.12 1.21 -0.11 -0.12 0.86
T -0.07 0.03 -0.12 -0.04 0.00 -0.11

 5end - CAGCTG
 
A -0.09 0.91 -0.13 -0.14 -0.13 -0.11
C 0.65 -0.14 -0.13 1.12 -0.11 -0.12
G -0.08 -0.13 0.83 -0.14 -0.13 1.45
T -0.09 -0.07 -0.09 -0.12 1.42 -0.11

 5end - CCTGGA
 
A -0.13 -0.12 -0.12 -0.07 -0.14 1.12
C 0.45 0.75 -0.12 -0.13 -0.10 -0.13
G -0.05 -0.12 -0.09 1.55 1.03 -0.12
T -0.06 -0.12 1.39 -0.10 -0.07 -0.12

 5end - CGAGGA
 
A -0.12 -0.03 1.06 -0.14 -0.13 1.39
C 0.89 -0.12 -0.13 -0.13 -0.11 -0.13
G -0.11 0.70 -0.07 1.03 0.97 -0.11
T -0.10 -0.07 -0.04 -0.10 -0.09 -0.11

 5end - CTGGCC
 
A -0.12 -0.13 -0.09 -0.13 -0.03 -0.13
C 0.62 -0.11 -0.13 -0.11 0.67 0.72
G -0.10 -0.07 1.45 1.00 -0.14 -0.10
T -0.11 1.79 -0.11 -0.12 -0.11 -0.12

 5end - GAAGAA
 
A -0.11 0.75 0.97 -0.14 0.91 1.03
C -0.01 -0.10 -0.13 -0.10 -0.10 -0.14
G 0.94 -0.09 -0.13 1.06 -0.14 -0.14
T -0.09 -0.09 -0.05 -0.09 -0.10 -0.10

 5end - GAAGGA
 
A -0.14 0.78 0.91 -0.11 -0.13 1.24
C 0.03 -0.10 -0.13 -0.14 -0.10 -0.13
G 0.67 -0.10 -0.09 1.24 0.91 -0.09
T -0.11 -0.07 0.00 -0.12 -0.10 -0.12

 5end - GAGAAG
 
A -0.12 1.06 -0.13 0.70 1.12 -0.12
C -0.13 -0.14 -0.10 -0.03 -0.11 -0.13
G 0.97 -0.11 0.89 -0.12 -0.07 1.06
T -0.09 -0.09 -0.10 -0.07 -0.01 -0.11

 5end - GAGCAG
 
A -0.11 1.03 -0.14 -0.13 0.94 -0.13
C -0.12 -0.13 -0.14 1.00 -0.11 -0.14
G 0.91 -0.12 1.12 -0.12 -0.09 0.97
T -0.09 -0.05 -0.11 -0.04 0.05 -0.12

 5end - GAGGAG
 
A -0.08 0.78 -0.12 -0.14 1.42 -0.13
C -0.10 -0.14 -0.14 -0.09 -0.13 -0.13
G 0.70 -0.07 1.18 0.97 -0.05 0.75
T -0.09 0.06 -0.11 -0.04 -0.12 -0.10

 5end - GCCAAG
 
A -0.13 -0.09 -0.13 1.36 0.97 -0.13
C -0.12 0.97 1.15 -0.13 -0.13 -0.09
G 1.03 -0.13 -0.14 -0.14 -0.12 0.62
T -0.10 -0.11 -0.07 -0.07 -0.05 -0.10

 5end - GCCAGC
 
A -0.13 -0.14 -0.14 1.18 -0.09 -0.14
C -0.14 1.03 1.42 -0.09 -0.14 1.15
G 0.75 -0.12 -0.11 -0.11 0.57 -0.13
T -0.08 -0.11 -0.07 -0.06 -0.06 -0.12

 5end - GGACGA
 
A -0.11 -0.14 1.15 -0.12 -0.03 1.39
C -0.11 -0.13 -0.13 0.54 -0.13 -0.14
G 0.91 1.18 -0.13 -0.08 0.67 -0.09
T -0.10 -0.10 -0.11 -0.11 -0.11 -0.11

 5end - GGAGAA
 
A -0.09 -0.14 1.12 -0.14 0.67 1.03
C -0.12 -0.10 -0.13 -0.09 -0.04 -0.14
G 1.12 1.09 -0.07 0.86 -0.12 -0.11
T -0.12 -0.07 -0.10 -0.11 -0.10 -0.06

 5end - GGAGCA
 
A -0.12 -0.14 1.24 -0.14 -0.10 1.03
C -0.11 -0.09 -0.13 -0.13 0.75 -0.14
G 0.89 1.00 -0.09 1.12 -0.09 -0.12
T -0.10 -0.07 -0.10 -0.11 -0.09 -0.08

 5end - GGAGGA
 
A -0.12 -0.13 0.91 -0.13 -0.12 1.24
C -0.06 -0.10 -0.14 -0.13 -0.06 -0.13
G 0.72 0.97 -0.05 1.24 0.72 -0.09
T -0.09 -0.04 0.01 -0.12 -0.10 -0.12

 5end - GGAGGC
 
A -0.13 -0.14 0.97 -0.14 -0.13 0.01
C -0.13 -0.14 -0.14 -0.13 -0.11 0.67
G 1.06 1.21 -0.05 1.00 0.83 -0.09
T -0.11 -0.07 -0.03 -0.07 -0.12 -0.10

 5end - GGCCAA
 
A -0.13 -0.14 -0.05 -0.14 1.55 0.78
C -0.10 -0.14 0.89 1.24 -0.07 -0.13
G 0.59 1.03 -0.13 -0.13 -0.13 -0.14
T -0.03 -0.11 -0.11 -0.07 -0.10 -0.08

 5end - GGCGGA
 
A -0.14 -0.13 -0.08 -0.13 -0.14 1.24
C -0.13 -0.12 0.57 -0.14 -0.13 -0.13
G 0.65 1.09 -0.05 1.12 1.09 -0.07
T -0.03 -0.11 0.03 -0.10 -0.09 -0.11

 5end - GGTGGC
 
A -0.13 -0.11 -0.13 -0.09 -0.14 0.00
C -0.14 -0.05 -0.13 -0.13 -0.11 0.83
G 0.65 0.52 -0.05 1.55 1.03 -0.11
T -0.05 -0.11 1.46 -0.10 -0.11 -0.11

 5end - GTGCTG
 
A -0.10 -0.04 -0.11 -0.14 -0.10 -0.11
C -0.09 -0.13 -0.13 1.15 -0.14 -0.13
G 0.42 -0.12 1.24 -0.13 -0.12 1.42
T -0.07 0.87 -0.11 -0.09 1.11 -0.11

 5end - TGCAGC
 
A -0.14 -0.09 -0.14 0.89 -0.14 -0.13
C -0.13 -0.14 0.83 -0.14 -0.12 0.89
G -0.14 1.33 0.00 -0.12 1.12 -0.13
T 1.30 -0.12 -0.07 -0.05 -0.11 -0.12

 5end - TGCTGC
 
A -0.06 -0.13 -0.14 -0.10 -0.09 -0.13
C -0.14 -0.14 1.12 -0.14 -0.11 0.72
G -0.14 1.03 -0.12 -0.12 1.58 -0.05
T 0.84 -0.09 -0.09 1.08 -0.10 -0.11

 5end - TGCTGG
 
A -0.05 -0.12 -0.14 -0.13 -0.09 -0.13
C -0.13 -0.14 0.94 -0.14 -0.12 -0.06
G -0.13 0.94 -0.12 -0.09 1.58 0.67
T 0.87 -0.07 -0.11 1.33 -0.10 -0.12

 5end - TGGAGG
 
A -0.14 -0.07 -0.14 0.94 -0.13 -0.09
C -0.13 -0.14 -0.12 -0.11 -0.13 -0.03
G -0.07 1.39 1.15 -0.07 0.72 0.42
T 1.56 -0.11 -0.07 -0.09 -0.08 -0.12

 5end - TGGTGG
 
A -0.13 -0.11 -0.14 -0.01 -0.09 -0.12
C -0.14 -0.14 0.00 -0.13 -0.13 -0.08
G -0.09 1.03 0.67 -0.05 1.45 0.67
T 1.23 -0.08 -0.11 0.90 -0.11 -0.12

 5end - GAAGAAGAA
 
A -0.14 0.75 0.91 -0.10 0.38 0.42 -0.14 0.89 0.78
C 0.03 -0.08 -0.13 -0.09 -0.01 -0.09 -0.04 -0.09 -0.13
G 0.76 -0.11 -0.12 0.60 -0.09 -0.12 0.84 -0.13 -0.13
T -0.11 -0.11 -0.09 -0.12 -0.11 -0.04 -0.11 -0.12 -0.08

 3end - GAAGAAGAA
 
A -0.16 0.60 0.83 -0.12 0.41 0.44 -0.15 0.91 0.91
C 0.03 -0.03 -0.12 -0.07 -0.04 -0.10 -0.01 -0.10 -0.12
G 0.77 -0.09 -0.11 0.56 -0.09 -0.11 0.69 -0.12 -0.12
T -0.13 -0.11 -0.09 -0.11 -0.11 -0.04 -0.13 -0.11 -0.11

 5end - CGATCAACG
 
A -0.10 -0.12 0.83 -0.10 -0.14 1.09 0.70 -0.12 -0.05
C 0.57 -0.05 -0.13 -0.13 1.07 -0.13 -0.13 0.73 -0.13
G -0.13 0.65 -0.12 -0.06 -0.12 -0.13 -0.08 -0.13 0.52
T -0.06 -0.13 -0.12 0.61 -0.11 -0.13 -0.12 -0.11 -0.05

 3end - CGATCAACG
 
A -0.09 -0.11 0.78 -0.16 -0.13 0.99 0.75 -0.13 -0.05
C 0.53 0.00 -0.12 -0.11 1.03 -0.12 -0.12 0.64 -0.12
G -0.12 0.53 -0.12 -0.08 -0.12 -0.12 -0.09 -0.11 0.53
T -0.06 -0.13 -0.12 0.79 -0.12 -0.13 -0.13 -0.08 -0.06

 5end - TGCTGCTGG
 
A -0.04 -0.13 -0.14 0.00 -0.13 -0.12 -0.12 -0.13 -0.12
C -0.12 -0.13 0.81 -0.09 -0.13 0.73 -0.12 -0.11 -0.13
G -0.13 0.81 -0.10 -0.13 0.81 -0.13 -0.13 0.92 0.81
T 0.68 -0.04 -0.11 0.41 -0.11 -0.08 0.88 -0.11 -0.12

 3end - TGCTGCTGG
 
A -0.09 -0.16 -0.16 -0.04 -0.15 -0.14 -0.14 -0.16 -0.12
C -0.11 -0.12 0.83 -0.10 -0.11 0.77 -0.12 -0.08 -0.12
G -0.12 0.80 -0.10 -0.12 0.66 -0.12 -0.12 0.77 0.83
T 0.77 -0.03 -0.11 0.50 -0.08 -0.06 0.88 -0.10 -0.12

SEE ESE is an OSI Certified Open Source Software .   

Acknowledgements

The project is supported in part by NSF Award MCB-0114792, "Arabidopsis 2010: Pre-mRNA Splicing Signals in Arabidopsis"

Contact Us

Feel free to send your comments or questions to us