#exon_chrom exon_from exon_to exon_strand exon_genes alu_chrom alu_from alu_to alu_name alu_strand exon_nsamples exon_samples* nleft_samples left_intron_readcounts* nright_samples right_intron_readcounts* nsamplesPSI maxPSI min10reads #(ordered) list of sample for intron readcounts: SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602 chr10 101017253 101017615 - PDZD7, chr10 101017491 101017826 h38_mk_AluSq2 + 52 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1331579,SRR1337098,SRR1341763,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1367943,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1418127,SRR1432123,SRR1434526,SRR1439873,SRR1440986,SRR1442571,SRR1453341,SRR1457482,SRR1468514,SRR1468955,SRR1474553,SRR1485459,SRR595926,SRR600361,SRR601500,SRR607337,SRR613627,SRR657635,SRR658307,SRR662233,SRR663633,SRR814967,SRR818033, 61 1,0,6,3,3,2,2,3,3,2,4,1,5,0,0,0,1,1,0,0,3,0,5,0,2,0,7,0,1,0,3,3,2,2,0,2,0,2,0,8,0,2,0,3,5,3,0,1,2,2,1,0,0,2,0,0,4,0,4,2,0,0,0,3,3,2,0,0,0,3,2,0,2,2,0,0,2,7,0,0,2,0,0,3,0,0,0,0,0,0,3,0,3,2,0,0,0,0,0,6,0,1,0,0,11,0,0,3,0,0,4,0,4,6,11,2,0 117 1,2,16,27,13,9,31,17,32,16,20,8,17,10,14,8,3,27,4,5,17,3,109,16,22,9,26,18,36,20,12,46,5,44,20,10,23,14,7,38,24,39,23,22,42,14,22,18,10,23,3,13,11,17,17,11,16,8,9,43,24,43,37,40,26,12,1,6,13,19,14,23,35,18,5,13,36,38,22,19,13,52,8,27,35,4,4,13,1,14,34,1,19,10,17,28,17,11,10,12,1,9,4,27,8,6,1,5,14,16,62,21,18,35,32,46,10 118 0.996800 1 chr10 102452066 102452187 + RPARP-AS1, chr10 102452034 102452352 h38_mk_AluSx - 2 SRR1455925,SRR613627, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 9,4,4,24,11,16,11,5,16,10,19,13,11,11,23,13,4,22,3,10,16,10,47,11,11,16,19,14,20,12,11,18,6,19,11,17,21,15,5,17,16,15,12,11,8,22,21,11,8,11,13,7,6,10,10,2,16,4,10,26,15,18,9,22,22,8,6,10,14,12,23,9,21,11,11,21,18,15,21,5,11,21,8,23,11,18,13,9,13,13,16,3,8,14,6,18,21,11,20,29,2,14,10,12,19,26,3,8,15,40,28,24,11,22,16,20,5 118 0.525202 1 chr10 102452090 102452187 + RPARP-AS1, chr10 102452034 102452352 h38_mk_AluSx - 105 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 111 4,1,2,9,4,4,8,1,5,4,5,5,3,4,6,4,3,4,3,3,3,6,17,2,5,1,7,3,10,3,0,5,2,9,1,2,3,2,3,6,4,11,9,8,1,4,1,4,7,2,5,2,1,3,3,4,6,2,6,5,7,1,3,7,7,5,3,6,2,2,7,3,3,2,4,5,6,2,6,5,8,8,5,13,6,5,1,1,6,1,8,0,2,6,4,1,4,3,0,12,0,3,3,0,2,1,3,0,5,10,5,7,3,9,5,6,1 117 9,4,4,24,11,16,11,5,16,10,19,13,11,11,23,13,4,22,3,10,16,10,47,11,11,16,19,14,20,12,11,18,6,19,11,17,21,15,5,17,16,15,12,11,8,22,21,11,8,11,13,7,6,10,10,2,16,4,10,26,15,18,9,22,22,8,6,10,14,12,23,9,21,11,11,21,18,15,21,5,11,21,8,23,11,18,13,9,13,13,16,3,8,14,6,18,21,11,20,29,2,14,10,12,19,26,3,8,15,40,28,24,11,22,16,20,5 118 0.985103 1 chr10 102455337 102455385 + RPARP-AS1, chr10 102455326 102455462 h38_mk_AluJb - 2 SRR1356619,SRR1437538, 117 20,5,20,57,31,30,36,13,34,20,41,19,24,20,37,39,18,61,8,14,35,12,111,19,25,20,38,36,43,24,30,39,6,40,13,29,63,24,9,40,33,33,24,29,24,34,46,16,12,26,16,22,17,18,19,18,44,9,22,48,24,39,13,53,50,18,8,21,23,24,49,47,47,24,17,41,44,26,25,21,24,42,17,52,37,48,19,13,22,20,37,5,25,30,26,50,45,16,30,63,2,34,15,14,53,47,10,10,32,59,57,52,20,55,65,71,13 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr10 113725817 113725890 + CASP7, chr10 113725785 113726104 h38_mk_AluSz - 1 SRR1487362, 8 0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,5 58 0,0,1,0,0,1,2,1,1,1,1,0,2,2,0,1,6,0,0,0,1,2,0,0,1,2,1,0,0,11,1,0,1,1,1,0,0,0,0,0,2,2,1,2,0,2,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,1,0,0,0,2,0,0,0,1,1,1,5,0,0,0,0,1,0,1,1,4,2,1,4,0,1,0,1,0,2,1,0,3,1,1,0,1,0,0,4,0,0,5,0,6,0,0,0,1,2,1,5 71 0.838950 0 chr10 119105311 119105495 + FAM45A, chr10 119105268 119105506 h38_mk_AluJb - 47 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1356444,SRR1357478,SRR1367943,SRR1368772,SRR1387264,SRR1387809,SRR1389979,SRR1414897,SRR1416477,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1468514,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1487685,SRR595926,SRR602314,SRR602516,SRR602704,SRR604456,SRR657635,SRR818033,SRR818210, 77 0,0,2,6,1,0,2,1,2,2,4,4,0,4,2,3,0,1,1,0,0,0,10,1,1,3,2,0,1,2,0,5,0,0,0,2,3,0,0,0,1,1,1,0,0,0,0,0,1,1,1,3,1,1,2,6,1,0,0,1,4,0,1,4,3,0,2,1,1,1,1,4,4,5,1,1,2,0,2,3,1,5,2,5,2,0,2,0,1,0,3,0,1,0,1,6,6,4,2,1,0,0,0,0,2,7,0,0,1,1,1,0,0,1,2,5,0 92 4,0,1,3,7,2,2,1,5,4,6,2,0,1,3,3,3,0,1,1,2,0,11,2,7,4,6,4,3,3,7,2,2,1,2,8,4,0,0,0,5,2,3,6,2,0,4,0,0,3,0,6,6,2,0,0,5,3,1,2,7,4,1,9,3,1,0,3,2,3,2,0,8,5,1,4,8,1,1,1,0,3,3,8,5,0,2,0,1,0,3,0,1,6,2,3,5,0,3,5,0,3,1,22,2,1,1,0,4,4,9,5,0,2,6,8,0 118 0.160411 1 chr10 124762300 124762558 - EEF1AKMT2,FAM53B, chr10 124762317 124762616 h38_mk_AluJb + 116 SRR1084649,SRR1102055,SRR1316940,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337412,SRR1340508,SRR1348159,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1408208,SRR1414897,SRR1415234,SRR1418127,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1474777,SRR1476571,SRR1485459,SRR1487685,SRR1488651,SRR599510,SRR601500,SRR602314,SRR602516,SRR604262,SRR604456,SRR613627,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602,SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1328895,SRR1336548,SRR1337098,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1360563,SRR1381673,SRR1386708,SRR1402900,SRR1408368,SRR1413562,SRR1416477,SRR1416754,SRR1418837,SRR1421177,SRR1433796,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1468955,SRR1471943,SRR1474553,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602704,SRR607337,SRR614802,SRR662534, 117 34,23,35,52,30,47,51,27,44,37,41,28,38,32,59,33,33,41,25,10,37,27,126,29,45,36,44,17,43,39,48,55,24,42,32,33,51,40,16,48,38,35,31,56,32,44,32,18,37,44,31,39,34,32,34,24,71,25,40,33,40,30,31,47,57,41,32,14,37,27,32,29,46,45,21,26,61,40,39,34,42,62,27,22,43,45,37,24,36,28,51,11,25,43,44,30,27,32,33,44,2,33,19,20,73,68,38,47,36,82,84,57,16,65,60,52,28 117 20,17,20,44,26,36,31,27,32,25,37,19,19,17,42,30,31,60,16,11,28,22,97,18,44,25,24,13,29,27,36,36,17,29,18,24,50,25,4,45,21,35,30,28,32,26,31,24,29,33,25,34,20,16,20,32,45,11,32,23,39,12,11,45,50,18,18,9,33,32,32,15,44,38,13,35,49,29,35,35,24,33,21,30,41,36,18,14,22,30,35,7,20,31,23,13,28,11,24,23,1,17,35,11,67,48,29,19,46,91,70,41,31,68,47,60,26 118 0.786879 1 chr10 124762476 124762558 - EEF1AKMT2,FAM53B, chr10 124762317 124762616 h38_mk_AluJb + 17 SRR1084649,SRR1340508,SRR1368772,SRR1387809,SRR1437538,SRR1464373,SRR663633,SRR1077405,SRR1328895,SRR1337098,SRR1348159,SRR1348360,SRR1408208,SRR1414897,SRR1453341,SRR1455925,SRR1500868, 30 0,1,1,2,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,2,0,2,0,0,0,1,1,0,1,1,0,0,0,0,0,2,0,0,2,0,2,0,1,0,1,2,0,0,2,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,2,0,0,1,0,0,1,4,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1 117 20,17,20,44,26,36,31,27,32,25,37,19,19,17,42,30,31,60,16,11,28,22,97,18,44,25,24,13,29,27,36,36,17,29,18,24,50,25,4,45,21,35,30,28,32,26,31,24,29,33,25,34,20,16,20,32,45,11,32,23,39,12,11,45,50,18,18,9,33,32,32,15,44,38,13,35,49,29,35,35,24,33,21,30,41,36,18,14,22,30,35,7,20,31,23,13,28,11,24,23,1,17,35,11,67,48,29,19,46,91,70,41,31,68,47,60,26 118 0.617299 1 chr10 125709498 125709567 - FLJ37035, chr10 125709454 125709594 h38_mk_AluJb + 91 SRR1072367,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1476571,SRR1487362,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 114 8,3,6,12,4,10,9,6,11,6,12,9,11,9,15,8,8,12,8,1,10,8,27,7,6,4,16,17,5,13,13,12,5,12,12,6,12,2,4,7,14,15,5,9,5,15,12,9,9,13,14,8,9,10,10,4,14,4,12,12,9,13,3,15,13,8,3,4,17,4,7,6,19,8,7,13,17,13,16,11,11,12,10,7,14,5,1,6,7,4,13,0,6,8,12,7,20,12,6,12,0,7,4,0,18,18,7,9,13,15,34,11,3,13,15,14,1 107 5,1,2,10,3,3,2,2,3,2,2,8,9,7,14,0,4,3,2,0,5,3,14,5,5,3,5,2,7,7,8,4,0,6,5,7,9,1,5,4,6,6,2,8,0,6,6,4,4,3,6,5,3,1,3,0,7,2,5,7,6,3,2,5,8,0,2,2,4,7,4,6,11,3,5,7,11,1,5,7,3,1,7,0,1,4,1,1,3,3,5,0,2,3,6,1,8,2,4,5,0,2,1,17,18,9,2,1,5,7,15,4,1,9,12,6,0 116 0.992194 0 chr10 130068276 130068608 - LINC00959, chr10 130068320 130068643 h38_mk_AluSq2 + 7 SRR1085495,SRR1102055,SRR1340508,SRR1408368,SRR1432123,SRR1457482,SRR1487194, 38 0,2,0,0,2,1,1,4,0,1,0,0,0,0,1,0,0,0,0,1,0,0,2,0,0,0,1,0,0,1,0,0,0,0,0,0,3,0,1,0,0,0,0,0,0,0,0,2,1,2,0,0,0,0,0,0,4,0,1,0,1,0,1,0,1,0,0,0,0,2,2,0,0,1,0,1,0,0,1,1,0,2,0,2,2,1,0,0,0,0,1,0,0,0,0,0,1,2,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,2,0,0 98 1,0,4,2,3,1,2,5,5,5,1,5,4,2,3,2,0,0,0,1,1,1,12,1,1,3,3,1,5,5,3,1,0,1,1,1,8,2,0,2,3,0,2,1,3,1,5,3,2,3,0,1,2,0,1,0,7,2,3,2,2,4,0,4,3,2,1,6,2,3,6,2,1,2,2,2,6,1,4,1,4,4,1,2,8,2,2,0,4,5,7,0,0,4,2,7,5,0,1,5,0,1,3,3,0,4,3,3,2,7,1,3,0,1,3,1,0 117 0.366834 0 chr10 130101094 130101211 - LINC00959, chr10 130100926 130101242 h38_mk_AluSx + 57 SRR1072367,SRR1085495,SRR1099499,SRR1314163,SRR1316940,SRR1317344,SRR1326179,SRR1328895,SRR1333741,SRR1337412,SRR1340508,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1414897,SRR1416477,SRR1418127,SRR1421177,SRR1432123,SRR1435293,SRR1435775,SRR1442571,SRR1447693,SRR1455925,SRR1468514,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR602314,SRR602516,SRR607337,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210, 98 2,1,5,2,3,1,4,3,6,5,5,3,0,2,5,6,0,1,0,2,2,4,8,0,2,1,2,3,3,5,2,4,0,2,0,3,5,1,0,6,2,1,4,2,1,5,4,1,1,2,3,4,1,4,4,1,3,0,0,2,11,4,10,1,1,2,2,1,3,1,2,3,4,1,1,5,6,1,1,1,4,6,0,1,2,2,2,0,2,2,1,0,8,2,3,1,1,1,1,6,0,0,4,0,1,6,0,3,3,2,8,0,0,2,3,5,0 103 3,2,4,4,3,3,2,3,1,2,3,3,2,0,5,10,4,3,1,1,0,3,9,5,7,3,5,3,5,4,5,2,1,3,0,2,2,1,2,1,3,2,7,4,0,3,5,1,3,1,3,3,2,6,1,3,2,1,0,2,4,5,3,5,3,2,1,1,2,2,2,0,4,0,1,1,6,3,4,5,0,2,2,7,4,3,2,3,3,2,2,0,4,3,1,1,4,1,1,2,0,3,0,0,12,11,0,0,1,5,13,2,3,4,4,8,1 112 0.939602 0 chr10 130180113 130180321 + GLRX3, chr10 130180086 130180352 h38_mk_AluJb - 1 SRR1387264, 117 10,10,20,13,13,15,8,10,9,13,13,13,9,5,20,12,28,14,20,5,13,13,45,9,21,13,18,13,14,13,9,20,6,18,3,6,19,9,9,15,13,7,14,15,27,5,18,16,3,10,13,6,4,13,5,10,25,14,10,17,12,23,16,15,16,13,9,5,18,5,20,13,9,10,2,17,12,18,15,6,7,23,13,10,12,15,10,10,20,7,17,3,10,11,5,9,11,12,22,15,1,13,7,17,40,15,3,14,16,31,23,13,5,25,14,25,22 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr10 15102218 15102336 + RPP38, chr10 15102185 15102495 h38_mk_AluJb - 106 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 114 9,5,5,10,16,7,9,7,9,8,11,6,7,2,6,5,9,4,5,5,7,5,33,7,8,5,17,9,9,7,11,8,2,10,3,14,15,5,0,6,3,12,2,9,4,9,11,4,2,10,5,6,1,6,4,1,9,2,5,5,12,9,2,10,10,5,8,7,5,7,5,12,12,1,3,6,7,4,7,8,8,6,1,12,11,12,7,2,4,2,7,3,7,16,8,12,7,7,6,4,0,5,4,22,22,6,4,0,5,11,18,11,1,12,8,10,1 117 11,7,11,19,8,11,14,14,12,15,10,7,5,8,10,10,15,10,4,2,6,18,33,7,15,8,3,14,11,11,16,13,5,8,12,13,15,13,6,16,16,19,8,9,12,11,7,10,2,10,6,8,5,6,7,7,10,4,7,16,7,15,6,14,10,8,10,4,9,10,6,14,13,17,2,7,15,12,2,7,15,19,3,11,18,14,5,10,12,4,9,1,15,20,18,22,10,7,8,5,1,14,5,26,19,15,8,10,7,11,14,10,5,26,12,18,5 118 0.995421 1 chr10 26648951 26649048 + FAM238B, chr10 26648902 26649218 h38_mk_AluSz - 1 SRR818210, 37 1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,1,0,2,0,1,0,0,1,2,0,2,0,1,1,2,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,1,0,2,2,0,1,0,0,0,0,0,1,0,0,2,1,1,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,2,0,1,2,1,0,0,0,1,0,3,0,0,1,1,0 26 0,0,0,0,0,2,0,0,0,1,1,0,1,0,2,0,1,0,0,0,1,1,0,2,1,1,0,0,0,0,0,2,2,0,3,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,2,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0 . . . chr10 35335928 35336076 - AL117336.3, chr10 35335919 35336121 h38_mk_AluJ + 1 SRR814967, 14 1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,1,0,2,3,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0 16 0,0,3,0,4,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,1,1,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0 . . . chr10 37873893 37874010 - ZNF25, chr10 37873744 37874038 h38_mk_AluJo + 1 SRR1348360, 66 0,0,5,0,0,0,0,4,1,0,0,0,2,3,1,0,0,1,0,0,2,0,7,6,0,0,5,2,3,3,5,8,3,6,3,3,3,0,0,0,0,0,0,0,0,1,4,0,0,2,0,1,2,3,1,5,0,1,0,1,2,4,1,2,0,1,0,0,0,8,2,0,4,6,2,2,9,6,0,0,0,3,1,5,0,0,0,2,12,0,6,0,0,0,1,0,3,2,3,5,0,0,1,0,2,3,0,1,6,1,1,0,1,3,2,1,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr10 37956838 37956908 - ZNF25, chr10 37956625 37956944 h38_mk_AluSp + 2 SRR1315970,SRR1368772, 7 0,0,0,1,0,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 22 0,0,0,0,1,0,3,0,2,0,0,2,0,0,0,0,0,0,0,0,3,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,3,1,0,0,0,0,0,0,1,0,0,3,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,3,0,1,0,0,0,4,0,0,0,0,0,4,0,2,2,0,0,0,0,0 118 0.008424 1 chr10 38039413 38039492 + ZNF33A, chr10 38039205 38039532 h38_mk_AluJb - 6 SRR1314163,SRR1340508,SRR1439873,SRR1447693,SRR1487685,SRR814967, 42 0,0,0,0,1,0,1,1,0,1,0,0,2,0,3,3,0,0,1,0,1,1,1,1,0,2,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,3,0,1,0,0,2,1,0,0,0,2,0,0,0,0,0,1,1,0,0,0,0,1,1,0,0,1,2,0,1,0,0,2,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,1,0,2,1,1,0,0,1,1,1,0,1,1,0,0,0,0,0,0,0,0,0,0,1,2,0,0 18 1,0,0,1,0,0,1,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0 103 0.187156 0 chr10 38039413 38039571 + ZNF33A, chr10 38039205 38039532 h38_mk_AluJb - 1 SRR1340508, 42 0,0,0,0,1,0,1,1,0,1,0,0,2,0,3,3,0,0,1,0,1,1,1,1,0,2,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,3,0,1,0,0,2,1,0,0,0,2,0,0,0,0,0,1,1,0,0,0,0,1,1,0,0,1,2,0,1,0,0,2,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,1,0,2,1,1,0,0,1,1,1,0,1,1,0,0,0,0,0,0,0,0,0,0,1,2,0,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 115 0.068252 0 chr10 38435130 38435253 + AL133216.2, chr10 38435107 38435420 h38_mk_AluJ - 70 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1356444,SRR1356619,SRR1361567,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR602314,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967, 116 20,6,9,28,14,14,20,34,8,29,11,15,5,10,41,38,30,9,7,10,13,20,20,10,12,9,67,21,29,28,38,10,13,25,11,9,4,8,5,29,17,47,14,17,40,26,15,8,17,22,39,14,3,25,18,19,43,16,17,11,3,8,4,13,15,14,12,6,13,27,6,28,13,11,5,8,42,6,3,23,25,10,7,60,37,34,23,3,21,8,8,6,8,48,9,10,22,10,6,57,5,11,11,0,33,69,19,16,29,73,82,23,10,84,64,59,16 101 8,2,8,4,3,5,3,9,1,4,2,3,2,3,2,5,8,1,1,0,3,4,5,3,3,2,5,0,1,5,6,0,1,0,2,1,1,4,2,4,2,5,0,8,3,2,1,1,3,1,5,6,2,5,3,2,5,1,0,5,0,0,0,1,2,2,1,0,4,6,1,1,2,4,1,2,8,2,0,3,3,6,1,6,8,6,4,0,5,1,6,1,5,4,3,1,4,0,3,3,0,4,2,0,2,2,5,0,6,20,7,5,2,6,1,1,5 . . . chr10 38437090 38437206 + AL133216.2, chr10 38437060 38437370 h38_mk_AluJb - 70 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1356444,SRR1356619,SRR1361567,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR602314,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967, 101 8,2,8,4,3,5,3,9,1,4,2,3,2,3,2,5,8,1,1,0,3,4,5,3,3,2,5,0,1,5,6,0,1,0,2,1,1,4,2,4,2,5,0,8,3,2,1,1,3,1,5,6,2,5,3,2,5,1,0,5,0,0,0,1,2,2,1,0,4,6,1,1,2,4,1,2,8,2,0,3,3,6,1,6,8,6,4,0,5,1,6,1,5,4,3,1,4,0,3,3,0,4,2,0,2,2,5,0,6,20,7,5,2,6,1,1,5 106 6,2,5,3,6,3,5,3,0,6,4,3,1,2,9,2,8,2,3,4,3,0,4,3,8,0,6,2,1,6,7,2,1,2,4,2,1,2,4,7,1,9,3,5,1,12,3,1,9,4,5,2,1,4,1,2,3,3,5,4,1,0,1,3,6,5,5,1,7,5,2,1,3,2,0,5,7,5,3,3,3,2,0,5,4,6,6,0,5,2,4,3,4,3,5,1,0,1,6,6,0,6,3,0,6,19,4,4,9,16,4,3,0,5,3,1,3 . . . chr10 38445417 38445607 + AL133216.2, chr10 38445377 38445586 h38_mk_AluJb - 110 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 16,2,10,17,14,18,19,8,16,8,12,15,9,8,18,13,34,11,14,3,6,13,26,7,11,5,14,14,12,8,15,12,1,8,5,8,5,5,6,14,14,20,12,9,23,7,10,8,14,6,11,9,7,8,15,5,20,8,21,8,4,1,9,11,17,17,8,3,14,17,15,6,17,9,3,17,33,22,1,12,13,14,11,14,9,18,17,4,18,7,20,5,13,18,14,17,20,6,17,25,1,16,10,10,19,25,14,19,23,61,25,15,9,21,21,26,13 115 28,13,16,46,31,62,20,26,21,26,23,28,10,28,40,25,61,22,20,7,26,16,41,22,26,7,41,14,33,30,57,9,8,22,14,13,4,9,9,21,10,35,7,33,32,38,25,10,21,15,26,25,11,29,41,18,38,22,35,14,5,6,7,29,30,27,21,7,26,45,17,14,34,16,9,32,79,29,0,44,17,48,13,24,38,47,40,9,41,7,21,7,18,52,25,36,34,19,37,49,8,31,23,0,52,52,39,55,63,131,62,48,18,45,24,61,36 . . . chr10 43647112 43647209 + ZNF32-AS2,ZNF485, chr10 43647052 43647383 h38_mk_AluJ4 - 19 SRR1320963,SRR1341763,SRR1360563,SRR1387809,SRR1415234,SRR1416477,SRR1418127,SRR1421177,SRR1440986,SRR1453341,SRR1464373,SRR607337,SRR657635,SRR661973,SRR662233,SRR1102055,SRR1360128,SRR1408208,SRR1474777, 42 0,1,0,1,0,1,1,0,0,1,0,0,0,1,1,0,0,1,0,0,1,1,0,0,2,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,1,0,2,0,0,0,1,2,1,1,0,1,0,0,0,0,1,0,1,0,1,0,0,0,2,2,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,2,0,1,0,0,0,1,0,0,1,0,1,0,1,2,0,7,1,0,0,1,1,1,0 72 1,0,0,0,0,0,3,0,0,0,1,0,1,2,0,1,0,0,1,0,0,0,6,2,1,1,2,1,3,0,1,1,3,4,0,2,0,1,1,3,2,4,2,0,0,1,3,0,1,0,2,3,0,2,1,4,3,0,0,0,1,0,2,2,3,2,0,0,2,1,0,1,4,0,1,1,3,2,1,1,0,3,1,1,1,3,0,1,0,0,5,3,1,0,2,0,1,1,0,1,0,0,0,0,3,5,3,0,2,4,2,8,0,4,2,0,1 . . . chr10 46002361 46002484 + TIMM23, chr10 46002180 46002478 h38_mk_AluJb - 5 SRR1416754,SRR1468514,SRR1468955,SRR1476571,SRR1487362, 68 0,0,2,2,0,1,0,1,1,1,2,1,0,1,1,1,0,0,0,1,2,0,2,1,1,0,3,1,1,0,0,3,0,1,1,1,3,0,0,4,1,2,1,0,2,1,1,1,0,0,0,0,2,1,1,0,1,1,1,1,4,3,0,2,0,0,0,0,1,1,1,0,1,0,0,0,4,2,1,1,0,1,2,0,5,3,0,0,2,1,0,0,0,1,0,1,2,1,0,1,0,1,0,4,2,0,0,0,1,0,1,0,0,2,0,2,0 104 0,2,2,12,1,3,4,3,3,2,1,0,3,1,5,3,6,1,4,0,3,2,8,4,3,0,2,1,4,1,3,6,0,6,1,6,8,4,1,3,6,6,2,4,3,9,7,2,2,4,0,1,3,6,3,2,6,2,0,2,3,2,2,6,3,2,1,2,3,5,4,1,1,0,0,4,5,3,4,4,4,4,2,5,8,12,6,0,2,3,3,1,2,6,3,1,5,7,0,8,0,2,7,26,2,4,2,10,11,3,7,2,2,7,5,6,0 118 0.024679 1 chr10 49943235 49943358 + TIMM23B, chr10 49943194 49943528 h38_mk_AluJ - 37 SRR1084842,SRR1099499,SRR1102055,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1367943,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1416754,SRR1432123,SRR1435020,SRR1442571,SRR1447693,SRR1453851,SRR1464373,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1498550,SRR595926,SRR601500,SRR602516,SRR602704,SRR613627,SRR657635,SRR657754,SRR662233,SRR662534,SRR814967, 44 0,0,0,5,2,2,4,0,0,0,0,0,0,0,0,2,3,0,1,0,2,0,3,0,1,0,3,1,0,0,0,0,0,0,2,1,0,0,0,4,0,2,0,3,5,2,0,0,0,0,0,0,1,0,0,0,2,0,0,3,0,0,0,0,0,1,0,2,4,0,1,0,0,0,0,3,0,0,0,2,2,0,0,7,1,0,0,0,4,0,2,0,0,2,0,2,4,0,0,0,0,3,2,0,3,2,0,8,0,0,6,1,0,9,0,0,0 101 2,0,3,4,6,4,6,4,5,3,11,3,2,6,3,2,4,3,0,0,6,0,8,3,3,1,8,0,3,7,2,5,5,2,1,3,2,3,3,7,1,3,0,4,7,10,11,1,0,4,2,1,1,2,4,4,5,1,4,3,1,4,2,8,6,9,1,1,10,4,4,3,6,2,2,2,11,4,0,9,7,7,1,7,3,5,0,0,9,2,8,3,5,4,4,3,11,1,2,7,0,3,5,0,6,10,0,0,6,7,5,4,0,11,0,11,1 115 0.498383 0 chr10 5924751 5924801 + FBXO18, chr10 5924560 5924875 h38_mk_AluSx1 - 11 SRR1315970,SRR1360128,SRR1361567,SRR1386708,SRR1387264,SRR1435775,SRR1437538,SRR1453851,SRR1468514,SRR613627,SRR821602, 71 0,0,3,2,0,2,0,1,3,3,1,0,1,0,0,0,0,2,0,0,3,1,3,1,1,0,2,0,1,1,1,0,7,2,2,2,3,0,0,3,5,1,0,1,0,0,1,1,1,2,1,1,1,1,0,1,2,3,4,3,0,2,5,0,2,2,0,0,1,0,6,0,0,4,2,1,7,0,0,0,0,3,0,2,0,2,1,1,2,0,1,0,4,2,1,1,2,0,0,0,0,2,0,0,1,0,4,0,0,0,3,2,0,2,1,3,2 71 0,1,0,1,2,1,0,0,2,4,0,1,0,1,0,2,0,0,0,1,2,0,1,2,1,3,0,3,2,8,2,2,4,1,1,0,0,3,0,2,3,1,3,0,1,1,1,3,4,0,0,1,0,2,0,2,2,1,1,0,0,1,2,1,1,0,0,0,1,0,6,3,1,0,1,0,3,1,1,0,1,1,1,2,2,0,0,2,0,2,1,0,0,0,0,0,1,0,0,1,1,2,1,0,0,4,3,9,0,0,0,0,6,2,3,0,1 118 0.039655 1 chr10 63150134 63150356 + NRBF2, chr10 63149933 63150261 h38_mk_AluSx1 - 5 SRR1102055,SRR1315970,SRR1318163,SRR1340508,SRR1487194, 40 0,0,2,1,1,1,2,0,2,0,2,3,2,0,1,0,1,0,1,0,0,0,3,0,0,0,0,1,0,0,0,0,0,2,1,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,1,0,0,1,0,0,0,1,0,0,1,1,0,0,1,2,0,0,0,1,0,0,2,0,1,0,0,0,0,0,0,0,0,3,0,0,4,0,3,0,1,2,3,0,1,0,1,0 59 0,1,0,2,0,0,2,3,1,1,1,2,1,0,1,2,2,0,1,0,1,0,9,1,0,0,0,2,0,0,1,1,1,0,0,0,1,6,2,0,0,0,0,2,2,0,1,0,0,0,0,2,0,1,0,0,3,0,1,0,0,2,0,1,0,3,0,1,2,0,2,1,2,0,0,0,0,0,0,2,1,0,0,0,3,2,0,0,3,0,4,0,2,2,1,0,1,0,2,1,0,1,0,0,5,2,0,0,2,0,1,0,1,1,1,0,1 118 0.055665 1 chr10 70128860 70128962 - AIFM2, chr10 70128704 70128998 h38_mk_AluJo + 1 SRR1389979, 16 0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,3,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr10 72102850 72102967 - ASCC1, chr10 72102683 72103004 h38_mk_AluSq2 + 104 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 12,1,2,10,4,2,6,5,5,3,5,4,3,6,8,3,5,4,1,5,1,7,24,3,11,4,5,4,2,8,6,9,5,6,4,1,7,2,5,10,9,10,7,8,8,8,10,5,9,5,2,3,3,6,5,3,7,2,7,12,3,3,1,8,12,4,8,4,2,3,9,5,2,15,5,11,4,5,7,5,6,11,8,11,4,6,6,3,5,3,9,0,3,2,15,8,9,8,5,8,1,12,5,10,9,7,0,12,6,6,7,7,7,3,15,8,10 115 4,3,10,6,4,1,2,3,4,4,10,1,7,3,2,6,5,2,2,3,3,11,15,3,6,5,2,1,6,10,5,3,2,4,4,1,9,5,4,5,3,7,3,5,9,3,5,4,8,1,2,4,3,11,4,3,2,4,4,6,5,3,1,2,5,2,4,1,3,7,7,1,6,9,2,7,6,4,8,4,2,5,9,4,7,7,7,1,7,4,4,0,0,5,7,4,3,3,11,6,1,5,2,15,4,3,2,4,3,11,2,2,1,6,14,8,4 118 0.214314 1 chr10 73077721 73077813 - P4HA1, chr10 73077691 73078025 h38_mk_AluJo + 8 SRR1315970,SRR1336548,SRR1360128,SRR1413562,SRR1471943,SRR600361,SRR657635,SRR818033, 50 1,0,0,0,0,0,0,1,2,0,2,0,0,1,0,0,2,0,0,5,1,0,2,1,1,0,0,0,0,0,0,0,2,0,0,1,1,0,1,0,2,2,0,0,0,0,1,2,1,0,1,0,1,0,0,0,1,1,0,1,0,0,0,1,0,0,0,0,0,0,1,1,2,0,1,0,1,0,1,3,0,0,1,2,0,1,1,0,9,2,0,0,2,1,0,1,1,1,2,2,0,2,0,0,3,0,0,0,0,2,0,0,0,0,3,0,0 25 0,0,0,0,0,0,0,0,2,0,1,0,1,0,0,2,1,0,0,4,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,2,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,1,0,2,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,2,0,0,0,0,0,0,1,0,0,5,0,0 114 0.096121 0 chr10 73408195 73408403 - ANXA7, chr10 73408027 73408355 h38_mk_AluJb + 1 SRR1455925, 23 0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,4,0,3,2,0,5,0,1,0,4,0,0,0,0,0,0,2,0,2,0,1,0,0,0,0,0,4,0,0,0,0,0,0,0,1,2,0,3,0,0,0,0,0,4,0,0,0,2,0,0 75 0,0,1,2,7,0,0,0,1,1,2,2,2,1,6,2,2,3,1,0,0,3,8,2,1,2,4,1,6,0,2,0,0,2,1,0,5,3,0,2,2,4,4,0,4,1,0,1,0,0,3,0,5,2,0,0,1,0,2,1,4,0,0,2,1,3,0,0,3,0,6,0,5,2,1,1,5,0,0,0,1,3,1,6,0,0,2,0,2,0,2,0,1,3,0,4,2,2,0,1,0,1,2,0,5,2,0,3,0,12,3,3,0,2,3,2,0 118 0.023111 1 chr10 73499595 73499687 + PPP3CB-AS1, chr10 73499582 73499718 h38_mk_AluJo - 7 SRR1335446,SRR1348159,SRR1381673,SRR1402900,SRR1474777,SRR604262,SRR657635, 30 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,0,2,0,0,0,2,1,1,0,1,2,0,0,0,0,0,2,0,0,0,0,0,1,1,0,1,2,0,0,0,0,1,1,0,0,0,0,0,0,0,0,2,0,0,0,0,1,1,0,1,0,0,0,0,0,2,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0 81 1,0,1,0,0,0,3,0,2,2,2,2,1,1,1,0,1,1,3,0,0,2,3,2,3,3,4,0,2,1,3,0,2,1,1,1,0,3,3,3,4,4,0,0,1,3,2,1,5,4,1,0,0,3,2,2,2,3,1,1,0,3,0,2,2,0,2,0,2,2,1,0,0,5,2,0,1,0,4,0,1,8,2,0,0,1,5,3,6,3,1,0,1,0,0,0,1,4,1,2,2,2,0,0,5,11,0,0,2,4,0,3,3,3,0,1,1 . . . chr10 74138806 74138927 - AP3M1, chr10 74138640 74138969 h38_mk_AluJo + 1 SRR1389979, 110 21,0,7,18,4,20,13,14,5,8,23,5,9,0,19,11,25,11,6,6,4,5,31,4,6,16,9,13,8,6,7,4,7,8,3,8,7,11,0,4,13,8,9,9,2,5,9,5,11,5,6,6,5,4,4,6,7,0,3,13,7,2,2,16,6,8,4,11,11,3,13,6,7,6,6,8,21,3,5,16,8,9,7,14,18,9,8,3,9,5,12,3,12,7,7,36,31,12,16,15,0,10,18,0,8,5,2,17,13,25,14,18,0,18,7,17,3 26 0,0,0,1,0,0,2,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,1,0,0,0,1,2,0,4,0,0,0,0,1,0,2,0,0,0,0,0,0,1,1,0,0,0,2,2,0,0,0,0,5,0,0,0,0,1,4,0,0,0,0,0,4,0,0,0 115 0.672371 0 chr10 74138806 74138931 - AP3M1, chr10 74138640 74138969 h38_mk_AluJo + 103 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 110 21,0,7,18,4,20,13,14,5,8,23,5,9,0,19,11,25,11,6,6,4,5,31,4,6,16,9,13,8,6,7,4,7,8,3,8,7,11,0,4,13,8,9,9,2,5,9,5,11,5,6,6,5,4,4,6,7,0,3,13,7,2,2,16,6,8,4,11,11,3,13,6,7,6,6,8,21,3,5,16,8,9,7,14,18,9,8,3,9,5,12,3,12,7,7,36,31,12,16,15,0,10,18,0,8,5,2,17,13,25,14,18,0,18,7,17,3 113 8,3,11,18,2,6,10,8,3,2,14,6,5,6,23,5,11,5,6,3,8,4,24,6,8,18,11,9,9,5,11,3,4,3,2,10,4,7,1,7,14,10,0,6,4,9,8,4,6,4,2,5,2,7,4,5,5,1,7,8,8,1,0,9,9,8,7,4,4,1,9,3,20,4,5,16,10,0,3,12,5,7,5,11,14,9,14,2,8,2,6,2,13,10,10,14,15,8,7,8,1,9,15,0,21,7,1,5,16,10,12,15,3,9,16,11,2 117 0.792287 0 chr10 7753952 7754069 - KIN, chr10 7754038 7754365 h38_mk_AluJo + 25 SRR1072367,SRR1084649,SRR1084842,SRR1340508,SRR1357478,SRR1386708,SRR1408368,SRR1418127,SRR1435020,SRR1435293,SRR1442571,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1471943,SRR1485459,SRR595926,SRR601500,SRR602516,SRR604456,SRR662233,SRR662534,SRR818210,SRR821602, 81 5,0,4,3,0,0,6,0,1,1,0,0,2,1,0,1,0,3,2,0,1,0,3,1,1,1,1,3,2,1,0,1,0,4,1,1,0,3,0,6,0,0,0,2,3,1,0,1,2,1,1,4,1,1,2,0,2,1,1,2,1,2,1,1,0,2,0,0,2,2,1,0,7,3,2,2,1,0,0,3,3,0,2,2,1,1,0,2,2,2,4,0,1,2,0,2,4,2,1,4,0,0,0,0,1,0,1,0,1,1,2,1,0,4,3,1,1 51 3,5,4,3,1,1,0,2,0,0,0,0,0,0,2,0,0,0,0,0,0,1,4,0,0,0,0,1,1,0,0,5,2,0,0,3,0,0,0,1,0,2,0,0,0,0,0,1,0,0,3,0,0,1,0,0,1,0,0,1,2,0,0,0,4,1,0,0,1,2,2,3,2,1,1,0,2,0,0,1,0,0,0,1,0,5,0,0,1,0,1,0,0,2,1,1,0,1,1,0,0,2,0,0,0,0,0,0,0,3,2,11,0,1,1,1,4 64 0.856771 0 chr10 78279399 78279494 + LINC00595, chr10 78279209 78279526 h38_mk_AluJb - 2 SRR1367943,SRR663633, 19 1,0,0,0,0,0,0,1,0,0,0,1,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,3,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0 97 2,4,0,4,1,2,0,0,1,2,2,2,4,3,5,0,0,2,1,6,2,3,12,2,2,0,5,3,1,5,6,2,2,3,1,2,1,0,2,7,1,5,2,1,3,4,4,2,7,1,0,0,4,7,1,0,1,4,2,4,8,0,1,5,4,0,3,2,3,2,2,5,6,4,1,10,4,4,4,1,0,5,8,3,3,1,4,2,8,4,5,0,3,4,5,6,3,8,2,1,1,3,0,0,2,1,0,1,5,0,7,3,9,1,0,0,1 . . . chr10 87246115 87246212 - NUTM2A-AS1, chr10 87246039 87246273 h38_mk_AluJo + 22 SRR1072367,SRR1077405,SRR1316940,SRR1356619,SRR1357478,SRR1399779,SRR1408208,SRR1416754,SRR1435775,SRR1437538,SRR1442571,SRR1444622,SRR1453851,SRR1457482,SRR1468514,SRR1468955,SRR1487194,SRR1487685,SRR600361,SRR613627,SRR661973,SRR663633, 48 2,5,1,0,1,0,0,3,0,2,0,1,0,0,0,1,0,1,0,0,0,0,1,1,2,0,0,0,2,0,1,4,0,0,0,2,0,0,0,1,0,0,0,3,1,0,3,0,1,1,0,0,2,0,1,0,1,0,0,1,1,1,4,0,0,1,1,1,0,0,1,0,0,1,3,0,2,1,0,0,0,0,0,0,1,0,4,0,0,0,1,2,3,0,0,0,0,4,0,0,0,1,0,0,0,1,0,0,0,5,4,0,2,0,0,0,0 117 31,8,37,6,18,14,26,28,17,49,13,12,16,14,28,4,20,40,11,6,19,5,62,44,49,6,32,29,16,6,18,35,5,2,16,26,37,5,12,26,13,19,13,15,15,6,25,11,15,23,7,1,6,22,8,9,37,23,5,43,27,25,24,15,33,15,9,20,24,19,35,24,16,23,14,16,32,23,35,17,10,28,22,37,32,31,12,11,25,8,24,3,18,26,35,15,20,18,14,34,3,13,22,39,59,59,10,32,24,40,44,36,13,65,54,30,27 118 0.993418 1 chr10 89337425 89337542 + IFIT3, chr10 89337374 89337707 h38_mk_AluJb - 1 SRR1487362, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.002601 0 chr10 90902243 90902344 + RPP30, chr10 90902200 90902535 h38_mk_AluSz6 - 112 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 2,5,10,32,13,11,9,15,10,17,17,3,7,4,16,9,16,9,5,3,12,7,26,9,10,6,16,9,10,8,11,20,6,11,10,4,10,17,1,18,8,8,12,14,3,10,10,7,3,13,6,11,4,7,3,11,17,2,12,16,7,14,8,7,14,6,3,4,10,2,23,7,13,11,3,11,13,9,4,16,3,13,3,19,8,5,1,1,3,5,17,5,7,12,9,15,25,9,5,15,3,11,2,10,19,20,6,11,7,21,25,9,0,30,19,21,11 116 5,7,11,16,16,9,14,16,14,21,18,12,11,7,12,15,14,20,7,6,11,10,59,10,13,5,16,6,17,10,10,34,8,8,10,10,15,15,8,18,7,13,9,16,11,11,16,13,7,15,10,14,4,8,13,14,18,5,13,15,10,15,10,20,22,5,9,5,16,7,32,6,15,9,6,15,6,12,12,13,5,16,5,17,19,10,1,0,3,4,31,5,11,16,9,19,15,7,8,12,2,17,6,41,38,26,6,33,34,34,25,14,3,27,22,23,7 118 0.998060 1 chr10 95386991 95387119 - SORBS1, chr10 95386820 95387152 h38_mk_AluJ + 14 SRR1072367,SRR1077405,SRR1326179,SRR1356619,SRR1361567,SRR1421177,SRR1439873,SRR1464373,SRR1468514,SRR1487685,SRR599510,SRR601500,SRR602314,SRR613627, 106 7,4,1,4,4,7,1,2,1,2,1,1,2,4,10,1,2,4,3,1,5,6,9,4,1,1,3,2,4,0,11,0,6,4,3,2,5,10,2,2,1,6,2,3,1,4,2,6,7,2,1,5,1,6,3,8,1,2,4,2,6,0,4,10,3,3,3,1,3,1,4,2,2,2,2,5,17,0,0,1,4,0,3,2,2,4,10,0,6,3,7,3,3,4,9,0,3,2,9,10,0,11,0,0,3,6,2,5,7,2,4,2,1,4,2,3,2 96 4,1,0,4,0,5,0,3,1,2,3,1,3,2,7,1,2,2,0,1,4,4,8,3,4,3,4,2,1,1,6,0,3,1,3,0,5,1,2,2,2,3,0,5,0,7,2,3,5,2,1,0,5,4,4,10,4,0,1,1,6,1,0,3,3,3,3,1,2,3,6,0,2,2,3,7,4,0,1,2,5,2,1,0,5,0,6,0,1,4,1,3,2,3,4,0,4,1,5,4,2,9,3,0,7,9,6,1,4,8,0,0,1,5,0,2,12 117 0.270754 0 chr10 98162883 98162975 + R3HCC1L, chr10 98162704 98163007 h38_mk_AluJb - 41 SRR1072367,SRR1077405,SRR1084842,SRR1102055,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1337412,SRR1340508,SRR1341365,SRR1354446,SRR1367943,SRR1368772,SRR1387264,SRR1390601,SRR1416754,SRR1434526,SRR1435020,SRR1439873,SRR1447693,SRR1453851,SRR1468514,SRR1485459,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818210, 85 4,7,2,6,0,0,3,0,1,0,3,2,0,0,2,0,2,5,1,1,2,3,1,1,1,2,0,0,3,0,1,0,0,2,0,5,3,3,2,2,2,1,1,3,1,0,4,2,1,0,1,1,3,2,1,0,0,3,1,3,1,1,0,2,0,3,1,1,3,1,3,0,2,1,1,0,2,0,4,2,0,3,0,5,1,3,1,0,2,0,6,1,1,1,1,1,0,0,3,3,1,2,0,0,5,4,2,3,4,6,4,2,0,3,3,4,0 98 4,2,1,5,3,1,4,0,4,0,3,7,1,7,8,3,2,2,1,0,5,3,6,4,1,5,4,2,5,5,5,0,3,1,1,6,7,3,0,1,5,2,1,4,0,4,7,1,3,3,6,1,1,1,4,2,2,0,4,8,0,0,0,2,4,2,4,4,6,1,3,0,2,3,3,4,3,1,0,4,0,1,1,5,5,3,4,0,2,1,5,0,2,3,5,5,3,3,4,3,3,2,0,0,6,13,1,0,9,7,3,5,0,8,1,7,3 107 0.954290 0 chr1 100179653 100179721 - LRRC39, chr1 100179564 100179752 h38_mk_AluJb + 1 SRR1317344, 12 0,0,0,2,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,1,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0 4 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 1060280 1060393 + AL390719.1, chr1 1060077 1060385 h38_mk_AluS - 26 SRR1084649,SRR1085495,SRR1102055,SRR1317344,SRR1326179,SRR1331579,SRR1337098,SRR1340508,SRR1341365,SRR1354446,SRR1387809,SRR1390601,SRR1402900,SRR1432123,SRR1433796,SRR1435775,SRR1440986,SRR1453341,SRR1453851,SRR1468514,SRR1471943,SRR600361,SRR602516,SRR607337,SRR657635,SRR662534, 60 0,0,1,2,1,1,3,2,1,0,1,1,1,1,4,0,2,2,2,0,2,0,2,2,0,0,0,0,3,0,0,1,0,0,0,0,1,0,0,2,0,1,0,3,1,2,1,1,0,1,1,1,0,0,0,1,2,1,0,0,0,2,1,1,2,1,0,1,0,1,1,0,0,0,0,1,1,1,0,2,0,2,0,1,3,0,1,0,1,0,2,0,1,0,3,5,0,0,0,4,0,0,1,0,2,0,0,0,0,0,0,5,0,5,0,0,0 104 1,0,4,15,2,2,13,5,15,4,14,4,10,3,4,5,7,16,1,1,14,2,36,7,6,3,11,6,13,5,9,14,0,3,1,2,12,15,1,5,2,10,3,15,8,2,7,5,5,10,4,2,0,3,3,11,9,8,0,6,3,2,1,16,1,3,0,6,3,8,1,12,2,6,0,5,14,7,0,9,4,9,0,16,12,3,3,2,1,7,6,1,6,4,13,22,5,3,8,17,0,7,6,3,4,0,0,3,4,4,11,24,0,12,16,16,0 102 0.989583 0 chr1 1092566 1092812 - C1orf159, chr1 1092797 1093058 h38_mk_AluJ + 3 SRR1414897,SRR1416477,SRR1432123, 56 0,0,0,4,0,2,0,0,0,0,4,2,3,1,3,1,0,2,0,0,3,0,4,0,1,0,0,0,0,1,2,2,0,0,1,0,0,0,0,0,0,0,1,2,8,0,4,2,0,3,2,4,1,3,0,0,3,0,4,0,0,0,2,0,8,0,0,2,2,0,1,1,0,2,1,3,6,4,0,4,0,1,3,2,2,2,0,0,0,1,0,0,2,0,0,2,2,0,2,0,0,0,0,0,2,0,0,2,0,0,5,6,0,0,6,0,1 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 62 0.870027 0 chr11 10690265 10690369 - LYVE1,MRVI1, chr11 10690099 10690395 h38_mk_AluSz6 + 101 SRR1084842,SRR1421177,SRR600361,SRR602704,SRR1072367,SRR1077405,SRR1084649,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1356444,SRR1356619,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR601500,SRR602314,SRR602516,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR821602, 107 14,3,19,6,4,10,0,8,5,23,7,6,11,22,13,4,22,8,5,6,9,21,30,7,3,13,4,0,0,18,15,0,11,5,10,7,2,7,13,4,26,17,2,9,3,19,11,13,24,11,4,2,10,13,15,11,13,6,11,5,15,0,2,11,13,9,29,13,6,5,10,10,3,5,11,18,31,0,2,0,4,13,16,16,13,9,25,2,22,8,15,3,10,12,39,3,6,4,31,23,9,23,6,0,12,10,6,11,5,15,4,2,0,4,24,0,1 112 18,6,16,9,5,14,1,8,4,19,10,2,25,13,11,4,13,6,2,11,9,19,20,6,11,13,12,5,2,16,21,0,7,0,7,10,5,7,9,0,17,11,3,8,5,18,7,15,28,5,4,3,9,15,13,14,17,9,7,12,25,0,1,9,13,6,28,14,10,4,12,1,2,17,13,16,33,2,10,2,3,6,23,21,7,19,27,6,28,15,14,5,9,7,29,4,18,6,47,34,2,20,4,0,16,6,3,5,2,36,9,8,5,5,19,2,13 111 0.990189 0 chr11 112229442 112229486 + PTS, chr11 112229374 112229701 h38_mk_AluSq2 - 1 SRR1498550, 10 0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0 19 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,8,0,0,0,1,0,2,0,0,0,0,1,1,0,2,0,0,0,1,2,5,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,5,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0 118 0.007029 1 chr11 118560275 118560418 - IFT46, chr11 118560121 118560444 h38_mk_AluJo + 1 SRR1418837, 17 0,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,2,2,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,0,0,0,0 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,3,0,2,0 118 0.006972 1 chr11 119123568 119123684 + ABCG4,HINFP, chr11 119123528 119123716 h38_mk_AluSz6 - 103 SRR1331579,SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 1,1,7,6,1,3,1,6,2,3,3,7,5,4,4,3,2,5,2,3,5,1,16,3,5,2,8,5,6,3,5,4,1,3,2,2,10,3,1,6,4,3,3,6,5,4,9,4,3,6,2,2,3,3,5,2,5,1,7,5,4,1,2,9,4,2,3,3,4,3,4,4,7,4,2,10,10,4,1,5,3,1,2,4,6,2,1,1,1,4,8,0,6,4,3,8,11,2,5,7,1,3,7,2,6,9,1,1,7,6,10,10,1,8,10,7,1 111 6,0,10,15,4,4,6,9,6,2,11,3,7,4,9,1,7,5,3,7,8,3,21,4,5,4,7,6,6,2,12,4,0,5,2,3,7,5,0,15,5,4,6,2,4,2,6,6,5,7,3,3,1,2,3,6,10,4,3,10,5,8,2,15,7,3,9,2,5,5,7,8,10,2,2,10,5,3,1,9,5,4,3,6,7,6,4,2,7,2,15,0,6,10,4,14,15,4,3,10,1,8,2,0,4,10,0,6,9,3,17,7,1,9,17,12,7 118 0.536964 1 chr11 125575803 125575931 + EI24, chr11 125575775 125576099 h38_mk_AluSx - 1 SRR604262, 30 2,0,1,0,2,0,2,0,0,1,0,0,1,1,0,0,0,1,0,1,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,2,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,1,1,0,0,0,0,1,0,2,0,2,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0 23 0,0,0,0,0,0,0,0,1,0,2,1,0,0,0,0,0,0,0,0,1,0,5,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,2,0,2,2,7,0,0,0,0,1,0,0,0,2,0,0,3,0,2,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,3,2,0,0 118 0.005300 1 chr11 127335024 127335145 + AP003481.1, chr11 127334999 127335317 h38_mk_AluSz - 64 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1335446,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1468955,SRR1474777,SRR1487362,SRR1487685,SRR1488651,SRR595926,SRR600361,SRR601500,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR662233,SRR662534,SRR814967,SRR818210,SRR821602, 94 6,0,0,11,2,6,0,0,1,3,5,8,0,1,1,3,4,1,5,0,7,2,10,2,6,21,11,1,6,0,2,9,2,4,3,13,21,2,0,2,6,3,1,1,1,5,9,0,3,11,0,2,2,6,1,1,6,2,8,6,7,7,1,2,3,4,2,1,3,0,7,0,1,18,4,1,0,2,1,7,3,13,1,0,2,7,2,1,0,0,3,1,7,2,4,1,3,0,12,5,0,1,6,0,12,0,1,0,0,1,3,11,0,5,4,2,5 100 8,0,1,5,5,6,3,1,2,2,5,9,0,3,6,0,5,0,2,1,0,4,11,3,7,19,15,1,9,0,1,11,1,4,6,5,17,9,0,2,7,2,4,5,2,10,9,2,8,14,0,4,7,8,2,2,5,1,5,3,10,5,3,7,6,3,1,4,12,0,7,1,4,13,2,4,5,2,1,1,2,10,2,0,0,6,5,3,0,1,7,1,7,2,2,2,6,0,6,3,0,0,6,7,8,10,0,8,1,1,7,5,0,7,2,3,16 . . . chr1 113048423 113048561 - AL357055.3, chr1 113048277 113048599 h38_mk_AluSp + 26 SRR1099499,SRR1318163,SRR1326179,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1356619,SRR1367943,SRR1375571,SRR1390601,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1435293,SRR1444622,SRR1468514,SRR1474553,SRR1487194,SRR1498550,SRR600361,SRR602704,SRR604456,SRR607337,SRR613627, 76 0,1,0,0,2,2,0,0,2,3,0,4,0,0,5,0,0,2,0,0,0,2,5,2,2,1,2,2,0,0,2,0,0,1,1,2,2,4,0,0,0,2,0,1,0,3,1,4,2,2,3,1,1,2,1,1,0,1,0,2,3,0,0,0,3,1,5,4,0,0,4,1,0,4,2,1,4,1,1,1,3,0,3,1,6,1,1,1,6,2,1,1,3,0,5,0,2,2,2,5,0,5,1,0,3,2,2,0,1,0,0,0,0,3,4,1,0 75 2,0,0,0,2,1,2,2,2,1,2,3,1,0,4,1,2,1,1,0,0,0,1,1,1,1,2,1,0,1,1,1,0,1,0,1,0,2,0,0,2,5,1,1,1,0,0,3,1,1,2,2,1,1,0,0,0,0,1,1,3,0,1,0,1,0,2,1,2,1,3,1,0,1,0,0,3,0,1,0,2,0,1,1,1,0,1,3,1,1,2,0,1,0,4,1,3,0,3,7,1,4,0,0,0,0,1,0,1,13,0,1,0,0,0,2,0 . . . chr11 134467865 134467987 + AP004608.1, chr11 134467831 134468159 h38_mk_AluSq2 - 12 SRR1328895,SRR1337098,SRR1348360,SRR1354446,SRR1387809,SRR1389979,SRR1439873,SRR1455925,SRR1464373,SRR1471943,SRR601500,SRR602704, 63 0,1,1,3,3,0,0,1,2,0,3,0,0,0,0,2,0,2,0,0,1,0,7,0,3,0,2,2,3,0,3,4,1,4,1,4,0,0,0,5,1,1,3,3,1,1,2,1,0,0,1,0,1,0,0,0,0,0,3,1,2,2,0,3,3,0,1,2,1,0,1,0,2,0,0,4,0,1,0,3,0,0,1,1,5,1,1,0,1,0,0,0,1,8,0,1,1,0,0,0,0,0,0,0,3,5,0,1,7,1,3,9,0,0,0,0,0 46 1,1,1,0,0,2,0,1,1,0,0,1,0,0,1,1,0,0,0,0,2,0,0,0,0,0,2,2,1,2,0,0,0,1,0,1,2,0,0,0,2,5,2,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,2,0,5,0,0,1,2,0,1,2,0,0,2,3,1,0,1,0,0,0,3,0,2,3,0,2,3,0,0,4,0,0,0,0,1,0,3,0,1,0,0,0,1,2,0,2,0 . . . chr1 114778932 114779050 - SIKE1, chr1 114778887 114779081 h38_mk_AluJb + 8 SRR1084842,SRR1085495,SRR1326179,SRR1340508,SRR1354446,SRR1390601,SRR1487194,SRR814967, 27 4,0,0,2,2,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,4,0,0,0,0,0,3,1,0,0,0,0,0,0,2,0,0,0,0,2,0,3,0,1,3,0,0,0,0,0,0,1,1,0,1,0,3,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,3,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,3,0,0,0 48 1,0,0,2,1,0,1,0,0,0,2,1,1,0,3,1,0,1,0,0,1,0,3,2,2,1,0,0,1,0,0,3,0,0,0,1,0,1,0,0,4,0,0,3,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,2,1,1,4,2,0,0,1,1,0,3,4,1,0,0,2,0,0,1,0,1,3,0,2,1,1,1,1,0,0,2,0,0,0,0,0,0,0,0,1,0,0,1,0,2,0,0,0 117 0.094415 0 chr1 114778932 114779054 - SIKE1, chr1 114778887 114779081 h38_mk_AluJb + 6 SRR1387809,SRR1418127,SRR1432123,SRR1434526,SRR1468514,SRR661349, 27 4,0,0,2,2,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,4,0,0,0,0,0,3,1,0,0,0,0,0,0,2,0,0,0,0,2,0,3,0,1,3,0,0,0,0,0,0,1,1,0,1,0,3,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,3,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,3,0,0,0 32 0,0,0,0,0,1,0,0,0,0,1,2,0,2,0,2,1,2,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,1,0,2,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,0,0,3,0,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,2,0,0,0,0,2,0,0,0,2,0,2,1,0,0,1,1,0 117 0.074893 0 chr11 18324236 18324296 + GTF2H1, chr11 18324043 18324273 h38_mk_AluSq2 - 2 SRR818033,SRR821602, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2 40 0,0,0,5,0,2,1,1,0,0,1,0,1,0,1,0,2,0,2,1,1,0,2,0,0,2,0,0,2,0,0,1,1,0,0,0,0,2,0,0,0,0,0,1,0,1,1,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,2,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,2,0,0,0,1,0,0,0,0,2,0,0,1,1,0,0,2,1,1 117 0.018680 0 chr11 1903104 1903256 + LINC01150, chr11 1903201 1903455 h38_mk_AluJo - 5 SRR1331579,SRR1435020,SRR1487362,SRR604456,SRR821602, 24 0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,8,0,5,0,0,1,0,0,0,3,1,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,2,0,0,0,0,1,1,1,0,0,2,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2 46 1,0,1,1,0,1,2,0,0,0,1,0,0,0,2,0,2,0,1,0,0,1,0,1,1,1,1,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,1,2,0,0,2,0,1,0,0,2,0,1,0,1,3,0,2,1,0,2,1,0,3,0,0,1,2,0,0,1,1,0,1,0,1,0,0,0,0,0,1,0,0,0,1,2,0,1,0,0,1,0,0,2,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,6 . . . chr1 120970811 120970940 + LINC00623, chr1 120970608 120970932 h38_mk_AluSx - 1 SRR1389979, 3 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 14 0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 1264783 1264830 - UBE2J2, chr1 1264616 1264902 h38_mk_AluSx + 21 SRR1084649,SRR1326179,SRR1333741,SRR1356444,SRR1356619,SRR1361567,SRR1416477,SRR1416754,SRR1435020,SRR1442571,SRR1455925,SRR1457482,SRR1468955,SRR1471817,SRR1476571,SRR1487194,SRR1487685,SRR602516,SRR604262,SRR604456,SRR661973, 97 0,0,3,1,1,3,0,5,4,1,0,6,1,1,4,0,3,2,0,1,2,1,12,4,1,2,1,1,0,2,3,1,0,1,2,2,2,2,1,0,1,0,1,3,3,1,2,1,1,1,1,3,2,1,3,2,3,1,1,5,1,3,2,2,3,3,2,0,0,4,2,4,4,2,2,3,1,1,3,4,2,5,2,2,5,2,2,0,3,2,2,0,6,1,0,2,5,2,4,5,0,1,0,0,4,0,3,3,4,6,5,3,0,3,4,5,2 86 0,0,2,4,1,1,0,2,2,3,2,0,1,2,3,0,1,2,1,0,1,1,2,2,3,1,2,0,5,4,3,3,2,2,2,1,4,3,0,2,2,0,0,1,1,2,0,2,1,1,3,2,1,0,2,0,1,0,0,2,1,0,2,1,1,3,1,1,0,2,0,1,2,2,0,4,3,1,3,1,2,0,2,5,5,1,2,0,1,0,3,1,4,0,1,3,3,2,2,1,0,3,0,0,1,2,0,0,4,8,0,3,0,1,3,4,0 118 0.063916 1 chr11 27338098 27338235 - CCDC34, chr11 27338027 27338264 h38_mk_AluJo + 3 SRR602704,SRR818033,SRR818210, 15 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0 25 0,0,0,2,0,0,0,3,0,0,0,1,1,0,0,0,0,0,0,0,2,0,15,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,8,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,1,0,0,2,0,2,0,0,0,0,0,0,0,0,0,3,7,7,2,0,0,5,0,0,0,0,0,0,2,0,0,0,0,0,3,2,0 . . . chr11 27338098 27338239 - CCDC34, chr11 27338027 27338264 h38_mk_AluJo + 2 SRR1375571,SRR1455925, 15 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 33056588 33056723 + TCP11L1, chr11 33056559 33056752 h38_mk_AluSx - 5 SRR1072367,SRR1435775,SRR1471943,SRR1485459,SRR661349, 36 4,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,2,0,0,0,0,1,3,0,0,0,2,0,0,0,1,0,1,1,1,0,0,2,0,1,0,0,1,1,0,2,1,0,1,1,0,0,1,0,0,0,0,0,0,0,0,2,0,1,0,1,0,1,0,0,0,0,2,0,0,0,0,0,0,2,0,0,0,2,1,3,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,1,0,0,0,1,0,0,0 38 2,0,0,0,0,0,0,0,1,0,1,0,0,0,0,3,0,0,0,0,0,1,3,0,0,2,0,0,0,0,0,0,4,2,0,1,0,0,0,0,1,1,1,1,2,0,0,0,0,0,1,0,0,2,0,1,1,0,2,0,0,2,2,0,0,1,0,3,0,1,0,0,0,0,0,0,2,0,0,2,0,1,0,1,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,4,1,0,1,0,0,5,0,0 116 0.063543 0 chr11 3361743 3361889 - ZNF195, chr11 3361765 3362076 h38_mk_AluJb + 108 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602704,SRR604262,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 114 8,2,18,27,29,15,17,22,12,12,17,12,10,11,21,19,12,13,14,6,19,6,71,14,18,15,29,12,15,7,14,11,9,19,6,14,11,13,2,14,11,11,12,11,13,24,26,8,11,11,14,13,13,15,8,11,26,14,26,21,13,12,12,34,16,10,7,11,24,13,13,15,35,4,0,21,18,17,5,25,7,18,3,15,27,14,12,1,12,12,21,0,19,30,13,0,28,8,5,22,1,15,12,27,30,19,7,32,15,43,44,20,2,32,23,29,12 113 8,2,14,23,8,6,17,5,11,4,10,3,5,4,15,10,8,12,5,3,10,8,35,3,6,3,14,3,9,3,2,4,4,8,3,12,14,9,2,12,6,4,10,11,11,11,11,1,7,5,3,5,6,5,7,7,16,3,3,9,3,3,3,17,2,2,4,5,8,4,8,4,13,11,2,18,9,8,5,12,5,12,1,13,6,23,5,0,8,1,15,1,9,19,5,4,17,6,0,10,0,6,6,0,33,9,2,11,20,34,21,11,2,29,11,9,5 118 0.836161 1 chr11 3361743 3362032 - ZNF195, chr11 3361765 3362076 h38_mk_AluJb + 1 SRR1333741, 114 8,2,18,27,29,15,17,22,12,12,17,12,10,11,21,19,12,13,14,6,19,6,71,14,18,15,29,12,15,7,14,11,9,19,6,14,11,13,2,14,11,11,12,11,13,24,26,8,11,11,14,13,13,15,8,11,26,14,26,21,13,12,12,34,16,10,7,11,24,13,13,15,35,4,0,21,18,17,5,25,7,18,3,15,27,14,12,1,12,12,21,0,19,30,13,0,28,8,5,22,1,15,12,27,30,19,7,32,15,43,44,20,2,32,23,29,12 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 3361743 3362073 - ZNF195, chr11 3361765 3362076 h38_mk_AluJb + 10 SRR1314163,SRR1337098,SRR1340508,SRR1341763,SRR1360563,SRR1439873,SRR657635,SRR661973,SRR662233,SRR662534, 114 8,2,18,27,29,15,17,22,12,12,17,12,10,11,21,19,12,13,14,6,19,6,71,14,18,15,29,12,15,7,14,11,9,19,6,14,11,13,2,14,11,11,12,11,13,24,26,8,11,11,14,13,13,15,8,11,26,14,26,21,13,12,12,34,16,10,7,11,24,13,13,15,35,4,0,21,18,17,5,25,7,18,3,15,27,14,12,1,12,12,21,0,19,30,13,0,28,8,5,22,1,15,12,27,30,19,7,32,15,43,44,20,2,32,23,29,12 13 0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,2,3,1,0,0,0,0,0 . . . chr11 3361797 3361889 - ZNF195, chr11 3361765 3362076 h38_mk_AluJb + 20 SRR1072367,SRR1320963,SRR1337098,SRR1354446,SRR1387809,SRR1389979,SRR1413562,SRR1414897,SRR1435775,SRR1440986,SRR1447693,SRR1454803,SRR1474777,SRR1487362,SRR1500868,SRR602314,SRR607337,SRR613627,SRR657777,SRR658307, 39 1,0,0,2,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,0,3,2,1,1,0,0,1,0,1,0,0,0,0,0,1,1,1,1,0,0,0,1,1,0,0,1,0,0,1,1,0,0,0,1,0,0,0,0,2,0,0,1,0,2,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,1,1,0,0,1,2,0,4,0,0,4,0,1,1,0,0,0,1,0,0,1,0,0 113 8,2,14,23,8,6,17,5,11,4,10,3,5,4,15,10,8,12,5,3,10,8,35,3,6,3,14,3,9,3,2,4,4,8,3,12,14,9,2,12,6,4,10,11,11,11,11,1,7,5,3,5,6,5,7,7,16,3,3,9,3,3,3,17,2,2,4,5,8,4,8,4,13,11,2,18,9,8,5,12,5,12,1,13,6,23,5,0,8,1,15,1,9,19,5,4,17,6,0,10,0,6,6,0,33,9,2,11,20,34,21,11,2,29,11,9,5 116 0.646058 0 chr11 3361797 3362073 - ZNF195, chr11 3361765 3362076 h38_mk_AluJb + 1 SRR1084842, 39 1,0,0,2,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,0,3,2,1,1,0,0,1,0,1,0,0,0,0,0,1,1,1,1,0,0,0,1,1,0,0,1,0,0,1,1,0,0,0,1,0,0,0,0,2,0,0,1,0,2,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,1,1,0,0,1,2,0,4,0,0,4,0,1,1,0,0,0,1,0,0,1,0,0 13 0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,2,3,1,0,0,0,0,0 . . . chr11 33733495 33733610 - CD59, chr11 33733325 33733644 h38_mk_AluSz6 + 1 SRR1498550, 112 3,1,7,2,1,12,7,4,8,14,3,3,5,3,8,9,23,0,13,5,3,1,21,4,7,8,6,3,2,1,4,2,10,3,3,11,6,3,1,12,14,4,2,1,1,10,6,5,4,2,2,3,3,7,3,6,7,3,6,9,5,7,2,5,8,4,9,0,2,4,8,7,7,6,6,10,18,3,2,8,5,4,5,7,7,10,21,2,28,4,9,5,9,4,7,1,4,3,9,3,0,11,5,0,16,12,1,3,4,6,4,10,0,20,5,11,5 56 1,1,0,2,0,1,1,2,0,2,1,1,0,1,2,0,1,0,1,2,1,0,3,0,0,1,1,0,1,3,0,0,4,0,0,0,1,0,0,1,1,0,0,0,2,0,1,0,0,0,0,0,1,3,1,0,1,1,0,0,2,2,0,2,1,0,0,0,1,0,0,0,0,2,2,1,1,0,2,0,0,4,2,0,1,2,2,0,15,0,0,3,1,0,0,0,0,0,5,0,1,0,0,3,1,0,0,0,0,0,1,1,0,0,4,0,0 118 0.062244 1 chr1 1388626 1388743 - AURKAIP1,CCNL2, chr1 1388603 1388804 h38_mk_AluSx1 + 113 SRR1432123,SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 20,8,17,21,20,24,29,26,22,22,16,13,6,23,28,12,18,7,7,14,12,27,18,17,10,6,28,24,10,58,21,22,10,14,7,6,6,8,25,28,12,43,15,15,18,23,30,16,29,12,25,14,8,15,24,17,22,20,13,20,5,4,17,13,31,15,14,7,24,32,13,21,7,26,8,12,35,26,2,16,14,29,24,34,17,43,27,12,24,13,14,2,21,11,19,20,20,18,12,33,3,30,6,0,38,47,10,30,10,45,15,10,15,15,36,9,6 115 35,0,20,25,20,23,12,14,15,23,8,6,4,15,26,13,19,17,11,2,9,25,25,10,17,2,19,17,11,72,18,26,6,11,8,6,7,15,22,29,8,40,14,21,27,23,12,13,16,15,22,16,12,13,19,21,25,22,14,16,5,4,13,13,33,19,15,6,32,23,11,19,11,21,9,16,28,10,8,10,11,25,13,22,12,47,30,12,16,13,16,0,21,6,20,4,17,12,18,17,3,19,10,4,49,50,16,25,15,76,26,14,19,20,28,15,7 118 0.139460 1 chr1 144459366 144459483 - NBPF15, chr1 144459199 144459516 h38_mk_AluJb + 83 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1408208,SRR1414897,SRR1415234,SRR1416477,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435775,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 6,6,9,13,16,8,15,6,8,8,11,9,1,2,8,9,10,15,4,2,11,9,17,10,9,6,14,1,17,8,11,8,5,9,7,11,6,11,2,8,7,15,5,10,4,4,8,4,5,6,11,5,3,3,4,5,15,2,10,9,3,6,1,6,11,8,5,1,7,2,11,3,28,3,2,10,9,5,2,11,10,7,1,14,9,6,13,1,5,3,7,2,5,10,3,11,14,1,11,12,2,13,9,0,14,15,5,6,17,16,18,15,1,13,9,13,5 112 3,1,3,15,7,13,12,5,9,8,9,5,5,3,8,10,9,5,3,5,6,6,21,8,1,6,11,3,5,4,9,8,3,5,2,9,6,5,0,3,1,9,5,9,8,7,6,4,3,5,3,5,5,3,3,8,9,1,8,8,6,11,4,2,7,2,4,4,7,3,10,3,13,4,3,11,9,1,0,15,11,4,1,6,12,9,6,2,3,0,7,4,1,10,3,6,12,2,10,8,0,3,2,0,18,12,2,3,5,17,9,9,1,8,9,10,8 . . . chr11 45528970 45529061 - AC103855.2, chr11 45528940 45529230 h38_mk_AluJo + 1 SRR1315970, 16 0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0 11 0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 . . . chr1 146533285 146533384 + AC245407.1,HYDIN2, chr1 146533346 146533533 h38_mk_AluJ - 46 SRR1102055,SRR1084649,SRR1084842,SRR1315970,SRR1317344,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1354446,SRR1356619,SRR1360563,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1418837,SRR1432123,SRR1439873,SRR1440986,SRR1457482,SRR1485459,SRR1487362,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 97 3,0,4,9,2,9,10,6,5,4,14,1,0,5,1,8,8,8,0,3,11,9,15,2,8,1,5,0,6,1,4,6,3,3,1,2,1,2,0,11,11,7,8,1,7,5,6,3,2,5,1,2,1,1,2,0,3,3,5,0,2,0,0,4,10,1,1,1,1,4,0,2,1,2,3,7,1,3,0,0,1,0,1,10,1,4,9,0,0,0,7,3,2,10,6,9,20,2,0,8,1,18,1,0,4,9,4,0,9,26,21,9,0,5,8,13,1 89 6,0,2,16,4,11,12,10,10,4,15,8,2,0,6,0,6,10,0,0,11,11,27,0,8,1,13,2,12,3,14,0,2,7,5,6,0,6,2,13,10,16,8,12,0,10,9,0,4,16,1,8,0,1,8,4,11,0,3,5,3,0,0,8,6,0,3,0,7,1,4,1,17,3,3,0,19,5,1,5,3,0,0,20,11,12,3,0,4,4,12,0,7,15,10,27,9,0,8,16,0,16,0,0,10,26,0,0,10,31,14,12,1,10,8,17,0 . . . chr1 146533311 146533384 + HYDIN2, chr1 146533346 146533533 h38_mk_AluJ - 1 SRR1447693, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 89 6,0,2,16,4,11,12,10,10,4,15,8,2,0,6,0,6,10,0,0,11,11,27,0,8,1,13,2,12,3,14,0,2,7,5,6,0,6,2,13,10,16,8,12,0,10,9,0,4,16,1,8,0,1,8,4,11,0,3,5,3,0,0,8,6,0,3,0,7,1,4,1,17,3,3,0,19,5,1,5,3,0,0,20,11,12,3,0,4,4,12,0,7,15,10,27,9,0,8,16,0,16,0,0,10,26,0,0,10,31,14,12,1,10,8,17,0 . . . chr11 46629907 46630100 + ATG13, chr11 46629962 46630128 h38_mk_AluJb - 1 SRR1498550, 41 2,0,0,0,1,2,1,2,0,1,0,0,0,0,0,0,1,0,1,1,2,0,2,0,1,0,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,4,0,1,1,1,0,1,1,0,0,0,0,1,2,0,0,1,0,0,0,3,0,0,1,0,2,0,2,0,0,0,0,1,1,1,0,0,1,1,0,0,3,0,0,1,1,4,0,0,0,0,0,0,0 117 45,5,23,81,41,36,59,22,28,33,47,39,25,27,66,47,38,42,24,11,50,12,130,26,39,35,40,18,42,23,33,18,14,25,14,30,41,50,10,26,44,34,32,51,39,32,23,28,23,18,17,29,12,22,20,22,33,12,29,31,32,27,2,60,34,29,21,30,23,32,39,14,55,31,33,68,55,14,16,52,25,43,17,51,62,34,17,6,28,21,61,8,39,34,18,57,75,11,34,29,3,38,31,12,84,57,17,25,66,124,87,60,5,96,75,102,14 . . . chr11 46630045 46630100 + ATG13, chr11 46629962 46630128 h38_mk_AluJb - 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 56,9,19,86,48,43,71,23,34,34,59,37,21,23,68,45,42,68,24,14,54,13,139,27,54,51,52,20,56,32,42,21,20,35,13,37,45,39,16,26,42,43,39,53,30,43,40,30,25,17,18,24,16,24,25,32,37,15,33,36,40,30,10,69,40,20,12,27,32,31,48,11,86,31,23,64,69,18,25,56,30,39,13,59,61,36,21,5,32,18,65,5,29,40,27,57,86,7,36,51,7,42,33,18,83,83,16,33,79,167,99,53,19,108,77,103,18 117 45,5,23,81,41,36,59,22,28,33,47,39,25,27,66,47,38,42,24,11,50,12,130,26,39,35,40,18,42,23,33,18,14,25,14,30,41,50,10,26,44,34,32,51,39,32,23,28,23,18,17,29,12,22,20,22,33,12,29,31,32,27,2,60,34,29,21,30,23,32,39,14,55,31,33,68,55,14,16,52,25,43,17,51,62,34,17,6,28,21,61,8,39,34,18,57,75,11,34,29,3,38,31,12,84,57,17,25,66,124,87,60,5,96,75,102,14 118 0.923098 1 chr1 148199995 148200094 - AC239809.3, chr1 148199846 148200033 h38_mk_AluJ + 16 SRR1072367,SRR1102055,SRR1331579,SRR1340508,SRR1348159,SRR1354446,SRR1387264,SRR1390601,SRR1414897,SRR1432123,SRR602314,SRR602516,SRR602704,SRR607337,SRR661973,SRR818210, 89 6,0,2,12,4,10,12,8,8,4,12,5,2,0,4,0,5,7,0,0,10,6,23,0,7,1,17,2,11,3,13,0,1,7,6,5,0,6,2,11,9,13,6,12,0,9,9,0,3,14,1,8,0,1,8,4,9,0,3,4,2,0,0,9,6,0,2,0,5,1,4,1,16,1,1,0,19,5,1,5,4,0,0,16,13,11,3,0,4,4,7,0,6,12,8,27,5,0,6,16,0,11,0,0,10,23,0,0,8,22,10,10,1,6,6,17,0 69 4,0,1,2,0,6,9,0,0,4,5,0,0,1,0,5,4,5,0,1,6,3,7,0,1,2,7,0,5,1,2,2,0,2,0,0,0,1,0,6,4,3,1,2,1,2,3,0,0,5,1,1,0,1,0,0,1,2,3,0,0,0,0,1,3,0,1,1,0,0,0,1,1,0,1,1,1,2,0,0,1,0,0,3,0,1,1,0,0,0,0,1,0,2,6,4,7,0,0,5,0,7,0,0,0,9,1,0,4,9,9,4,0,3,3,5,0 . . . chr1 148369318 148369426 - LINC01138, chr1 148369341 148369621 h38_mk_AluJo + 7 SRR1102055,SRR1317344,SRR1418837,SRR1464373,SRR1487362,SRR600361,SRR607337, 24 0,0,3,3,0,0,1,0,0,1,3,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,3,0,1,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,1,3,0,0,0,0,1,0,0,0,1,6,0,0,0,0,0,0,2,0,0,6,0,0,0,2,0,0,2,0,0,0,0,0,2,0,0,0,0,0,2,0,0 16 0,0,1,0,0,0,1,1,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 58 0.281221 0 chr1 148434440 148434561 - AC245100.4,LINC01138, chr1 148434260 148434592 h38_mk_AluSx3 + 107 SRR1316940,SRR1488651,SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 113 10,2,2,6,4,1,12,6,3,6,2,9,5,2,9,4,10,11,3,3,2,11,12,1,2,5,3,2,4,3,10,0,6,10,6,3,6,3,6,3,4,13,3,8,4,6,7,1,8,2,6,7,6,6,4,6,4,5,6,5,9,4,1,4,11,2,6,4,5,9,4,7,6,9,5,6,11,0,9,0,2,2,5,7,9,23,10,2,7,5,5,6,6,4,11,6,6,5,13,12,0,12,2,1,6,10,3,7,5,21,7,6,3,11,3,5,2 116 12,2,7,9,6,6,10,8,8,13,5,8,4,3,13,2,18,7,5,3,9,9,18,10,4,9,5,2,11,2,16,4,11,6,14,3,6,6,3,5,6,12,8,17,5,6,12,4,14,4,9,6,5,5,15,11,9,9,5,7,8,8,2,9,8,4,8,6,3,4,5,13,4,11,3,8,16,3,8,2,4,13,10,18,7,41,11,3,28,10,6,9,14,11,19,9,8,15,12,18,1,15,5,0,10,14,5,12,6,7,9,17,1,7,6,6,2 . . . chr1 149101262 149101379 - NBPF9, chr1 149101095 149101413 h38_mk_AluJb + 66 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1408208,SRR1414897,SRR1415234,SRR1416477,SRR1418837,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1439873,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1468955,SRR1474553,SRR1485459,SRR1500868,SRR600361,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 112 6,5,7,12,12,7,12,8,5,9,13,5,3,4,8,6,8,14,3,1,7,8,13,10,9,6,6,0,15,7,7,7,5,6,6,7,5,11,2,8,6,17,4,11,5,4,7,4,3,5,8,5,1,3,4,5,10,4,9,6,3,3,1,9,7,6,3,4,4,3,10,3,14,5,4,3,10,4,2,7,8,4,0,12,4,3,7,1,4,3,3,2,2,6,4,9,17,1,11,11,0,11,8,0,13,16,4,6,15,12,16,15,0,15,9,13,2 109 4,2,5,11,2,8,9,9,2,9,5,1,1,6,8,3,6,10,1,3,7,6,17,8,3,6,11,0,6,3,5,7,0,3,0,2,3,2,0,8,7,10,2,7,1,3,9,2,3,6,6,6,3,2,6,4,5,3,7,5,6,4,1,7,3,1,1,5,14,9,1,3,6,9,7,2,13,4,0,6,7,7,2,7,6,8,3,0,1,7,7,1,7,2,6,12,16,0,3,6,1,5,11,10,14,11,2,1,7,6,11,6,0,9,9,9,4 . . . chr11 49882485 49882574 + AC136759.1, chr11 49882438 49882729 h38_mk_AluS - 1 SRR818210, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0 . . . chr1 150142838 150142931 + VPS45, chr1 150142671 150142961 h38_mk_AluSq2 - 12 SRR1102055,SRR1320115,SRR1320963,SRR1348159,SRR1361567,SRR1402900,SRR1415234,SRR1433796,SRR1444678,SRR1453341,SRR1468955,SRR818033, 96 1,0,3,3,1,0,4,2,2,1,2,1,2,3,0,5,2,2,5,0,0,1,5,1,3,3,4,6,0,2,1,1,0,2,2,1,3,0,1,3,1,0,1,5,4,3,1,4,1,0,3,1,1,0,1,1,3,3,1,5,1,2,3,2,0,1,3,3,2,3,3,2,6,1,4,1,6,3,1,1,8,4,2,3,2,3,2,0,2,0,5,0,2,3,3,1,2,0,2,1,0,1,0,0,7,0,2,0,2,1,2,2,3,3,7,2,1 89 0,0,1,0,0,2,3,2,2,3,2,2,2,2,6,1,0,3,1,1,1,5,4,2,1,1,4,1,3,4,2,0,0,1,3,0,2,0,1,1,1,4,0,1,0,3,2,1,5,0,3,2,3,0,0,0,7,2,1,2,2,3,2,1,3,1,4,3,1,2,0,2,1,4,1,2,1,3,0,1,0,2,3,2,1,2,0,3,3,0,2,0,3,1,1,0,1,4,0,0,1,3,1,15,2,0,0,0,1,1,2,2,0,1,5,3,1 118 0.026685 1 chr1 150142838 150143066 + VPS45, chr1 150142671 150142961 h38_mk_AluSq2 - 1 SRR1341763, 96 1,0,3,3,1,0,4,2,2,1,2,1,2,3,0,5,2,2,5,0,0,1,5,1,3,3,4,6,0,2,1,1,0,2,2,1,3,0,1,3,1,0,1,5,4,3,1,4,1,0,3,1,1,0,1,1,3,3,1,5,1,2,3,2,0,1,3,3,2,3,3,2,6,1,4,1,6,3,1,1,8,4,2,3,2,3,2,0,2,0,5,0,2,3,3,1,2,0,2,1,0,1,0,0,7,0,2,0,2,1,2,2,3,3,7,2,1 11 0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0 118 0.014747 1 chr1 150861247 150861302 - ARNT, chr1 150861200 150861315 h38_mk_AluJo + 18 SRR1085495,SRR1102055,SRR1337098,SRR1348159,SRR1389979,SRR1390601,SRR1416477,SRR1435020,SRR1453851,SRR1487194,SRR595926,SRR600361,SRR602516,SRR602704,SRR614802,SRR814967,SRR818033,SRR818210, 55 0,0,0,1,2,1,2,0,1,0,1,1,0,0,0,0,0,0,0,0,2,0,0,0,0,1,1,0,1,0,1,0,0,4,0,1,0,2,0,0,1,0,1,2,0,0,1,0,0,0,0,1,0,0,0,0,1,0,2,1,1,1,1,0,1,0,0,0,1,0,2,1,0,0,0,1,2,0,0,1,0,1,0,2,2,0,1,0,0,0,1,0,1,2,2,2,5,1,0,1,0,1,1,0,3,0,1,0,1,0,1,1,0,5,3,2,0 31 0,0,1,2,1,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,3,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,1,0,1,0,3,1,1,3,2,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,2,2,1,0 116 0.118342 0 chr1 151284855 151285101 + ZNF687, chr1 151284793 151285084 h38_mk_AluJb - 1 SRR1408208, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 11 0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,2,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 151454962 151455103 - POGZ, chr1 151454822 151455130 h38_mk_AluS + 1 SRR602516, 94 9,0,2,10,5,2,3,1,1,1,7,5,1,1,7,1,4,4,0,3,2,2,8,8,3,3,4,1,9,5,1,0,1,3,1,2,0,4,0,3,1,9,2,3,1,4,9,0,4,1,2,2,0,0,2,5,6,0,2,8,1,2,2,4,4,2,1,0,3,4,3,1,4,0,2,5,9,1,0,7,2,2,1,10,8,0,4,1,6,2,1,0,3,7,6,4,6,3,0,3,0,4,0,0,0,0,0,3,5,13,7,5,0,5,10,6,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 152341087 152341210 + FLG-AS1, chr1 152341072 152341342 h38_mk_AluJ - 65 SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1331579,SRR1333741,SRR1340508,SRR1341365,SRR1342045,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1413562,SRR1418127,SRR1421177,SRR1432123,SRR1435020,SRR1435293,SRR1435775,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1500868,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 97 1,0,2,0,3,3,4,1,0,6,4,1,0,2,2,1,7,1,0,2,1,1,14,3,2,2,0,1,5,3,7,1,2,2,2,2,2,9,0,4,5,3,5,2,4,0,1,2,3,0,2,2,6,2,0,2,6,0,1,9,4,5,0,0,5,1,1,4,2,0,1,0,2,5,1,5,3,1,0,4,2,1,3,2,3,1,2,1,1,2,3,2,0,5,4,9,4,2,1,2,0,5,5,2,6,3,0,1,6,4,13,2,0,1,5,2,1 103 1,0,0,3,3,4,8,3,2,2,3,7,3,6,2,0,10,6,2,2,3,0,22,6,3,3,3,1,0,7,8,0,2,4,3,0,2,2,3,5,2,3,11,3,3,5,3,3,4,1,1,0,0,4,2,4,7,3,1,9,1,4,1,2,9,6,5,5,11,0,1,2,9,4,1,2,4,1,1,4,2,1,3,4,8,3,1,3,0,3,4,0,2,6,10,12,8,1,7,5,0,10,3,0,1,10,3,6,6,9,7,3,1,4,5,7,1 . . . chr11 539580 539726 + LRRC56, chr11 539375 539705 h38_mk_AluY - 90 SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR657635,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 103 1,0,3,7,8,3,6,2,5,3,6,7,5,3,3,6,0,11,1,3,6,0,17,3,5,11,2,5,7,6,7,2,3,5,6,2,4,7,2,6,8,8,6,8,3,3,5,1,2,7,4,3,1,3,9,1,5,3,3,7,4,3,1,14,9,2,2,4,3,0,7,0,8,11,1,1,8,8,2,9,3,5,1,4,11,5,3,0,2,1,7,0,0,6,1,4,5,4,2,8,0,5,1,0,8,0,0,5,7,6,10,10,0,9,8,7,0 116 1,2,2,9,14,5,8,4,11,12,7,7,5,10,9,8,3,17,5,4,10,7,20,5,7,9,6,8,8,3,7,15,2,9,7,3,6,7,3,8,10,10,4,7,8,10,8,7,2,9,5,5,2,8,6,3,19,3,9,4,4,8,5,14,24,9,2,3,8,7,9,2,7,13,2,10,6,13,1,10,9,10,5,8,12,1,3,4,4,7,11,2,1,13,1,7,5,1,2,6,1,5,2,2,9,4,8,7,7,6,15,15,0,14,11,16,5 . . . chr1 155204025 155204184 + AC234582.1, chr1 155203832 155204146 h38_mk_AluSx3 - 1 SRR1316940, 2 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 3 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 105 0.005012 0 chr1 155244095 155244233 - GBA, chr1 155244108 155244411 h38_mk_AluSx3 + 24 SRR1099499,SRR1326179,SRR1341763,SRR1361567,SRR1367943,SRR1368772,SRR1386708,SRR1399779,SRR1416477,SRR1418837,SRR1435293,SRR1439873,SRR1440986,SRR1447693,SRR1453851,SRR1464373,SRR1468514,SRR1471943,SRR1487194,SRR1488651,SRR1498550,SRR602314,SRR602704,SRR661973, 106 3,0,1,5,1,7,5,3,1,2,2,6,6,5,4,3,1,1,2,0,2,5,12,2,3,6,5,0,4,3,2,1,0,3,5,4,4,1,2,4,1,2,0,7,5,4,3,1,7,2,1,2,1,3,5,2,6,1,1,3,2,2,4,3,8,4,6,1,2,6,4,1,1,1,4,8,6,1,3,4,4,0,1,1,5,1,8,2,4,2,1,0,3,3,5,4,4,1,3,2,1,4,5,0,2,9,0,0,2,17,9,3,0,3,3,5,2 73 0,0,1,1,0,2,0,0,1,1,0,1,2,1,3,0,2,0,0,0,1,2,3,2,3,0,0,0,1,1,2,0,1,0,2,2,3,3,3,2,0,0,0,1,4,2,0,1,1,0,0,3,4,1,4,2,2,0,0,0,1,0,0,5,3,1,0,0,2,1,4,0,1,1,1,3,6,1,0,2,1,0,3,1,4,0,0,2,2,0,2,0,0,2,2,0,4,0,1,1,0,1,0,0,1,2,0,1,1,7,3,2,1,2,0,2,0 114 0.458245 0 chr1 155679928 155680008 - YY1AP1, chr1 155679896 155680208 h38_mk_AluJb + 20 SRR1084649,SRR1315970,SRR1320115,SRR1328895,SRR1337098,SRR1337412,SRR1341763,SRR1354446,SRR1360563,SRR1386708,SRR1413562,SRR1415234,SRR1418127,SRR1435775,SRR1453341,SRR1464373,SRR1474553,SRR1487362,SRR595926,SRR814967, 81 2,0,1,4,4,3,1,1,2,0,1,1,3,0,1,2,0,1,1,0,4,1,5,1,3,0,1,0,2,2,2,0,1,2,1,0,4,0,0,5,0,1,1,0,0,2,1,0,3,0,3,1,1,1,1,2,1,1,0,4,0,1,2,1,2,2,0,0,1,2,0,0,3,1,0,3,1,1,0,1,2,2,2,2,1,4,1,0,1,0,3,1,0,1,0,0,2,0,0,1,0,2,1,2,1,2,0,0,1,2,3,4,0,3,3,0,1 56 1,2,1,1,0,1,0,0,3,0,1,1,2,0,0,1,1,1,0,0,2,1,2,0,3,1,0,1,2,0,0,0,0,3,2,0,1,0,0,4,0,1,0,1,0,1,0,0,2,1,3,0,0,1,2,0,0,0,0,0,0,2,0,0,1,0,1,0,1,1,0,0,1,0,0,3,0,1,1,1,1,1,0,0,0,3,0,0,0,0,2,0,0,2,0,0,2,0,0,1,0,1,1,0,0,0,0,0,1,2,1,1,0,2,0,0,2 118 0.050524 1 chr1 155709033 155709125 + DAP3, chr1 155708991 155709157 h38_mk_AluSz - 42 SRR1072367,SRR1084649,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1326179,SRR1331579,SRR1337098,SRR1341365,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1381673,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1421177,SRR1439873,SRR1440986,SRR1453341,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1476571,SRR1487362,SRR1487685,SRR600361,SRR601500,SRR602314,SRR602516,SRR604262,SRR661349,SRR662233,SRR814967,SRR818033, 92 3,0,4,1,2,1,2,2,5,3,5,0,0,1,5,3,10,0,1,0,2,1,2,2,4,1,0,0,0,1,2,5,5,1,3,6,1,1,1,6,6,2,5,4,1,6,2,1,0,4,1,0,1,1,1,3,1,1,2,2,0,5,0,7,2,2,0,0,0,4,2,2,2,4,3,5,4,2,1,3,5,2,2,3,1,6,4,0,2,0,2,0,2,3,2,3,1,2,1,3,0,0,0,0,14,2,0,2,4,0,5,2,4,7,4,5,0 100 5,0,7,9,0,4,2,4,3,3,2,0,0,4,5,1,6,1,2,0,3,2,3,7,0,1,1,1,8,1,4,4,2,2,2,3,3,6,2,5,6,1,5,4,1,9,4,2,0,1,6,1,1,1,1,3,4,3,1,3,6,3,2,8,5,1,1,0,0,4,1,0,3,5,0,5,7,4,3,3,0,4,2,1,3,12,8,1,0,2,5,0,3,6,2,3,3,5,5,3,0,3,2,6,4,1,0,1,6,1,9,4,3,4,4,4,0 117 0.137303 0 chr11 559779 559860 + AP006284.1, chr11 559761 559934 h38_mk_AluJ - 4 SRR1102055,SRR1317344,SRR1354446,SRR1387809, 75 2,0,2,0,1,1,5,1,0,4,1,1,1,0,2,2,1,2,0,5,1,0,0,0,0,0,4,0,1,2,3,3,0,2,2,0,0,0,0,1,0,1,0,2,4,0,0,2,1,0,1,1,3,1,0,1,0,1,2,0,0,0,0,2,2,2,1,1,1,1,1,3,1,1,0,0,1,3,0,3,1,2,1,2,0,1,2,0,1,0,0,3,0,0,1,5,2,3,0,5,0,2,1,2,3,0,0,6,0,3,2,2,3,0,5,1,3 30 0,0,0,0,0,0,2,1,0,0,1,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,1,2,1,1,0,0,0,2,0,0,0,0,1,0,1,2,0,0,0,0,1,0,0,0,1,0,0,1,0,1,0,0,2,0,0,0,0,1,2,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,1,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0 . . . chr11 58571257 58571332 - LPXN, chr11 58571050 58571352 h38_mk_AluJb + 1 SRR1418837, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 74 0.039189 0 chr11 59139957 59140167 - AP001258.1, chr11 59139925 59140198 h38_mk_AluSx + 21 SRR1077405,SRR1316940,SRR1335446,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1360563,SRR1413562,SRR1416754,SRR1440986,SRR1455925,SRR1468514,SRR1474553,SRR1474777,SRR1487362,SRR1498550,SRR602704,SRR607337,SRR661973,SRR662534, 89 3,6,2,2,1,4,2,1,1,4,2,2,1,2,5,1,7,1,1,0,3,1,6,0,2,4,0,0,2,3,4,2,3,2,3,2,2,0,2,2,0,3,0,1,1,2,3,3,2,2,3,4,4,0,0,2,4,0,0,0,2,0,0,1,4,1,0,4,2,0,1,0,8,0,1,1,1,0,4,0,2,4,3,1,1,8,2,0,4,1,0,1,0,2,2,3,6,2,2,5,1,1,0,0,2,2,0,0,3,6,4,5,0,2,2,5,4 91 2,5,0,0,2,1,1,1,1,5,1,1,2,1,1,1,0,3,2,1,5,1,6,0,3,7,3,0,2,0,2,0,2,4,1,2,0,0,0,1,1,1,1,2,1,1,2,5,2,2,1,1,2,3,2,2,1,0,0,0,3,0,0,4,3,1,0,4,2,3,2,0,3,3,1,2,5,1,1,1,2,1,2,1,4,6,2,0,4,1,0,4,2,2,1,3,3,1,1,1,2,2,6,0,1,0,0,0,3,1,0,5,0,3,0,1,1 . . . chr11 61265604 61265785 - VWCE, chr11 61265756 61266080 h38_mk_AluSz6 + 1 SRR1447693, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 62871577 62871669 + SLC3A2, chr11 62871555 62871680 h38_mk_AluJ - 92 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1488651,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 113 2,0,5,64,6,15,69,14,38,7,41,8,16,9,36,24,12,16,4,2,29,1,129,19,10,8,32,9,39,8,5,22,8,42,4,20,22,13,2,34,18,11,13,23,16,22,18,2,4,12,0,12,3,9,19,19,20,1,24,32,2,18,8,24,7,7,2,7,10,23,18,7,44,21,3,23,40,20,2,52,37,18,0,28,37,7,3,2,5,2,39,2,18,25,7,37,31,1,5,7,0,8,12,2,19,29,1,17,54,31,44,25,1,32,43,39,8 114 7,0,3,67,20,13,50,13,48,4,63,12,15,14,46,23,18,27,1,2,40,2,163,17,13,13,59,25,40,5,9,22,8,42,5,35,29,15,1,26,20,19,16,23,24,20,26,5,7,18,2,15,3,11,16,14,30,2,32,43,3,25,15,33,18,8,1,12,6,25,14,22,52,18,3,36,36,26,5,61,32,19,2,33,38,16,3,1,9,6,41,0,22,24,11,48,42,3,4,6,0,15,22,4,20,25,10,16,47,43,84,38,1,41,47,43,2 117 0.805709 0 chr11 62876784 62876879 + SLC3A2, chr11 62876579 62876908 h38_mk_AluSq2 - 5 SRR1340508,SRR1354446,SRR1360563,SRR1455925,SRR662233, 63 1,0,0,2,3,1,1,1,3,0,1,0,1,2,3,0,3,1,0,0,2,1,19,0,0,2,0,2,5,0,1,1,0,4,0,0,1,0,0,3,1,0,1,0,0,0,2,0,0,3,0,0,0,1,0,1,1,0,1,4,0,0,1,3,1,0,0,1,1,0,0,0,3,3,0,2,1,0,0,1,2,1,0,1,2,0,0,0,1,0,2,0,0,2,0,1,1,1,1,0,0,0,0,0,0,1,0,0,1,2,6,2,0,3,1,2,1 113 2,2,11,16,5,4,12,7,8,4,9,8,6,4,22,6,19,4,3,4,8,2,50,5,10,7,6,5,7,4,5,10,9,15,2,5,16,3,3,12,8,12,4,12,8,9,7,6,6,3,1,7,3,3,9,5,5,1,9,6,1,5,3,9,11,5,9,0,2,7,8,5,12,7,8,7,15,7,1,5,8,18,7,16,12,2,7,7,43,4,7,0,1,9,5,10,7,18,1,8,0,4,4,3,14,2,2,0,4,2,10,6,3,9,7,13,4 116 0.351890 0 chr11 62882667 62882807 + SLC3A2, chr11 62882479 62882728 h38_mk_AluSx3 - 9 SRR1340508,SRR1356444,SRR1375571,SRR1413562,SRR1433796,SRR1444678,SRR1471817,SRR1485459,SRR663633, 60 0,0,5,1,0,1,0,6,2,0,0,0,0,0,4,0,0,0,0,0,0,0,12,0,4,0,1,0,0,11,2,0,0,0,0,0,1,4,0,1,0,1,0,0,0,2,0,3,5,2,0,4,3,2,2,0,0,5,4,0,1,0,0,1,0,2,8,2,0,0,3,0,0,2,5,1,6,2,7,0,0,3,5,5,3,2,2,2,3,7,0,0,2,0,3,2,0,8,0,3,0,4,0,0,0,0,1,0,1,4,0,8,3,1,1,1,0 75 4,0,16,0,1,4,0,7,0,0,1,0,3,0,6,0,2,0,0,3,0,0,10,0,1,0,2,10,0,13,1,3,5,3,1,0,2,4,1,0,2,0,0,0,0,6,0,5,7,2,0,2,3,0,4,1,3,4,2,3,5,0,0,4,3,2,6,4,2,2,3,0,0,7,4,2,3,2,12,0,0,8,3,6,3,2,0,6,10,3,1,1,2,4,2,0,0,9,0,4,1,4,1,0,8,4,0,0,0,6,0,3,7,2,0,0,0 118 0.018276 1 chr11 62882667 62882999 + SLC3A2, chr11 62882479 62882728 h38_mk_AluSx3 - 4 SRR1340508,SRR1413562,SRR1444622,SRR1500868, 60 0,0,5,1,0,1,0,6,2,0,0,0,0,0,4,0,0,0,0,0,0,0,12,0,4,0,1,0,0,11,2,0,0,0,0,0,1,4,0,1,0,1,0,0,0,2,0,3,5,2,0,4,3,2,2,0,0,5,4,0,1,0,0,1,0,2,8,2,0,0,3,0,0,2,5,1,6,2,7,0,0,3,5,5,3,2,2,2,3,7,0,0,2,0,3,2,0,8,0,3,0,4,0,0,0,0,1,0,1,4,0,8,3,1,1,1,0 117 260,101,355,309,220,280,213,522,253,453,178,160,289,239,419,152,1014,146,229,257,194,279,825,124,258,211,283,210,162,460,316,220,345,196,116,177,263,199,178,303,349,301,128,246,361,385,223,181,316,145,119,167,195,206,356,193,314,146,261,317,235,117,190,281,350,231,322,133,190,143,242,272,210,393,278,244,507,220,177,183,152,301,375,288,343,399,526,233,1728,232,217,85,189,229,289,239,258,956,217,315,52,278,125,185,661,478,199,484,242,566,266,295,185,299,359,288,229 . . . chr11 65043025 65043164 + SAC3D1, chr11 65042834 65043102 h38_mk_AluJo - 91 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657127,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818210, 105 2,1,1,3,9,0,1,2,4,5,2,2,1,7,2,5,2,0,0,0,4,3,15,3,2,1,9,0,2,1,4,1,0,3,1,1,8,2,0,2,2,4,2,2,4,6,6,0,2,2,3,3,4,1,2,2,6,2,5,5,3,6,3,3,5,1,3,1,0,3,4,3,3,3,2,1,4,2,4,3,5,4,1,3,7,1,1,1,2,2,2,3,2,3,2,1,1,1,3,4,0,1,0,3,15,4,1,1,3,2,7,2,2,4,1,5,0 107 5,2,3,5,6,8,1,7,6,8,2,6,5,1,2,7,4,10,2,0,2,8,13,2,7,3,6,4,2,2,5,2,1,7,4,8,3,4,2,13,6,7,2,5,8,16,4,2,3,3,6,6,2,8,3,2,6,4,4,6,6,7,7,5,10,1,3,0,5,3,4,7,7,2,2,6,6,7,1,9,9,4,1,4,3,0,3,4,3,5,8,0,1,3,0,2,8,3,4,4,0,2,0,3,0,5,0,3,8,1,2,6,1,14,1,4,0 118 0.274580 1 chr11 66756353 66756505 + C11orf80, chr11 66756328 66756511 h38_mk_AluSx1 - 74 SRR1084842,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1416477,SRR1421177,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 95 0,0,0,8,1,1,9,3,3,2,4,4,0,0,5,3,2,6,2,2,8,2,14,8,1,2,4,1,6,2,3,6,0,4,2,7,4,4,1,4,5,4,4,5,1,1,3,2,0,0,0,2,1,0,5,4,1,2,3,6,3,2,0,6,6,0,0,1,4,1,6,5,13,6,2,7,4,0,2,3,2,3,0,6,5,0,0,0,3,1,2,2,6,7,1,5,8,0,2,5,0,4,2,10,9,2,1,0,4,3,4,6,0,8,8,6,3 110 0,0,4,9,2,2,11,1,12,3,6,2,3,2,5,7,6,7,3,2,6,0,24,5,11,9,7,1,12,2,5,8,1,5,1,5,7,5,3,14,8,4,5,11,7,4,5,3,1,7,1,9,1,3,1,2,11,3,11,4,2,9,2,6,5,2,0,2,7,6,8,9,21,2,1,12,14,2,1,6,4,9,1,9,9,8,2,0,1,3,17,1,5,6,2,4,8,1,3,5,0,5,3,0,22,16,2,3,5,10,14,8,5,18,18,6,6 113 0.846444 0 chr11 67009879 67010009 + SYT12, chr11 67009817 67009917 h38_mk_Alu - 1 SRR1342045, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,5,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 67009879 67010122 + SYT12, chr11 67009817 67009917 h38_mk_Alu - 1 SRR1356444, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,5,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0 45 0,0,0,0,0,0,0,2,1,0,2,1,0,2,3,1,1,0,1,0,0,0,1,2,0,0,0,0,0,4,2,0,0,0,1,0,0,0,2,0,0,4,0,2,0,7,0,1,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,4,0,2,0,0,0,0,1,0,0,1,3,5,0,2,1,2,3,3,1,1,3,0,1,8,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,5,4,0,1,2,0,2,0,0,1,0,1 . . . chr11 68072732 68072825 - CHKA, chr11 68072700 68073011 h38_mk_AluJ + 1 SRR1367943, 40 1,0,0,0,0,1,0,3,0,0,0,0,2,0,0,1,0,0,0,0,2,0,1,0,0,0,6,0,0,0,0,1,0,0,1,1,1,2,2,0,3,0,0,0,3,3,5,0,0,0,0,0,0,3,0,0,2,0,0,0,0,2,0,1,0,0,0,0,0,3,0,0,0,2,0,3,4,0,0,2,0,5,0,1,5,0,3,0,0,1,1,0,4,1,1,0,3,0,0,0,0,0,0,0,1,0,0,0,5,0,0,2,0,0,0,0,0 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0 118 0.008966 1 chr1 168114456 168114549 - GPR161, chr1 168114292 168114580 h38_mk_AluS + 61 SRR1084842,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1390601,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444678,SRR1453341,SRR1454803,SRR1455925,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR657754,SRR661349,SRR662233,SRR662534,SRR663633,SRR818033,SRR818210, 101 2,3,1,9,4,4,8,2,1,2,7,4,4,1,4,4,15,1,2,0,5,0,11,2,3,3,5,4,3,1,2,2,2,2,0,2,2,6,1,4,5,1,0,5,7,2,4,3,2,2,1,2,1,3,1,1,3,0,1,8,1,2,2,3,3,1,0,4,3,1,3,4,7,0,0,4,3,5,1,2,4,4,0,8,2,3,3,0,4,1,7,1,0,4,0,9,8,1,4,8,0,0,1,0,6,3,3,0,3,2,9,2,2,8,8,6,1 90 1,1,0,6,3,0,2,1,1,5,2,1,3,0,4,3,7,0,0,0,5,1,6,1,0,3,1,3,4,4,4,3,0,2,2,2,1,4,1,1,4,0,1,4,1,1,7,2,2,1,0,3,0,0,0,2,0,0,0,8,0,3,3,1,2,1,2,1,1,1,1,1,4,0,1,1,1,2,0,2,3,2,0,2,2,4,5,1,3,0,5,0,1,6,2,5,2,0,3,1,0,1,0,0,6,2,0,1,5,3,2,2,2,3,9,6,2 104 0.960752 0 chr1 168114456 168114553 - GPR161, chr1 168114292 168114580 h38_mk_AluS + 2 SRR1085495,SRR1421177, 101 2,3,1,9,4,4,8,2,1,2,7,4,4,1,4,4,15,1,2,0,5,0,11,2,3,3,5,4,3,1,2,2,2,2,0,2,2,6,1,4,5,1,0,5,7,2,4,3,2,2,1,2,1,3,1,1,3,0,1,8,1,2,2,3,3,1,0,4,3,1,3,4,7,0,0,4,3,5,1,2,4,4,0,8,2,3,3,0,4,1,7,1,0,4,0,9,8,1,4,8,0,0,1,0,6,3,3,0,3,2,9,2,2,8,8,6,1 2 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 108 0.788168 0 chr1 16964226 16964272 + CROCC, chr1 16964094 16964382 h38_mk_AluSz - 1 SRR1468514, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 40 0,0,1,0,1,0,3,1,0,0,0,0,0,2,1,1,0,0,0,0,2,0,0,0,0,0,2,1,0,1,3,1,0,0,1,1,0,0,2,1,0,2,2,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,1,0,0,0,3,0,0,0,1,0,0,0,0,1,0,0,1,4,0,0,3,0,2,0,1,2,1,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,1,0,3 118 0.038221 1 chr11 71480186 71480274 + NADSYN1, chr11 71480141 71480482 h38_mk_AluSq2 - 7 SRR1317344,SRR1333741,SRR1354446,SRR1437538,SRR1442571,SRR1447693,SRR1453341, 12 0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 108 25,9,9,17,11,13,14,10,18,27,8,15,2,9,12,10,9,15,8,4,7,13,21,23,12,9,18,6,10,11,17,8,0,7,12,10,4,9,6,20,8,24,3,7,12,11,13,0,13,2,8,9,0,5,10,10,19,22,9,8,1,0,3,11,19,11,0,1,20,13,20,7,11,16,3,7,19,8,3,12,5,6,7,16,5,20,13,0,0,0,13,0,10,10,10,15,10,14,23,10,2,18,12,8,7,24,2,8,9,15,10,10,2,18,18,9,4 118 0.399481 1 chr11 71480219 71480274 + NADSYN1, chr11 71480141 71480482 h38_mk_AluSq2 - 1 SRR1487685, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 108 25,9,9,17,11,13,14,10,18,27,8,15,2,9,12,10,9,15,8,4,7,13,21,23,12,9,18,6,10,11,17,8,0,7,12,10,4,9,6,20,8,24,3,7,12,11,13,0,13,2,8,9,0,5,10,10,19,22,9,8,1,0,3,11,19,11,0,1,20,13,20,7,11,16,3,7,19,8,3,12,5,6,7,16,5,20,13,0,0,0,13,0,10,10,10,15,10,14,23,10,2,18,12,8,7,24,2,8,9,15,10,10,2,18,18,9,4 118 0.396421 1 chr11 71520808 71520909 + NADSYN1, chr11 71520673 71520941 h38_mk_AluJ - 16 SRR1084842,SRR1099499,SRR1315970,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1387264,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1471943,SRR1487362,SRR602704,SRR814967, 35 0,1,0,2,0,1,0,0,4,2,1,0,0,0,0,0,0,2,1,0,0,0,1,0,0,0,1,1,2,3,3,1,0,0,0,0,0,2,0,0,1,0,0,0,2,1,3,2,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,1,0,1,0,1,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,3,0,0,0,0,4,0,0,1,0,0,0 64 2,0,0,2,2,4,0,1,4,0,0,2,0,1,0,0,0,2,0,0,0,0,2,3,5,1,2,3,3,0,4,5,0,0,3,1,0,0,0,6,6,0,0,1,6,3,5,1,3,0,0,3,0,3,0,1,0,1,1,0,0,0,4,0,2,0,2,0,0,1,2,3,0,0,1,1,1,0,0,6,2,2,1,2,0,4,1,0,0,0,2,0,3,1,2,0,1,0,0,0,0,1,2,0,0,0,0,4,0,3,4,3,0,4,1,4,3 104 0.371775 0 chr11 71962152 71962289 + RNF121, chr11 71961957 71962272 h38_mk_AluYi6 - 58 SRR1084842,SRR1099499,SRR1316940,SRR1317344,SRR1326179,SRR1333741,SRR1337098,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1375571,SRR1387264,SRR1390601,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1453341,SRR1453851,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR602516,SRR602704,SRR607337,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR818033,SRR818210, 85 6,1,0,7,0,3,0,0,3,2,2,3,0,1,4,0,1,5,0,0,5,0,7,5,4,2,2,4,6,3,2,1,0,1,0,0,3,4,1,0,5,2,2,2,1,1,4,0,2,3,2,1,1,1,0,2,1,1,1,3,0,3,1,6,4,1,0,1,1,2,3,0,3,2,3,2,5,2,0,3,1,5,0,1,2,5,2,0,3,3,2,0,2,1,0,1,4,1,0,2,0,0,0,0,3,0,0,3,3,7,3,6,0,1,4,6,0 102 1,1,1,4,2,5,2,0,2,3,5,1,0,5,2,4,3,3,0,0,5,1,10,4,6,0,4,2,6,4,4,3,2,3,3,0,3,1,4,1,1,1,2,3,3,2,10,1,2,7,1,2,1,3,3,5,5,0,5,5,2,4,5,9,7,2,3,3,0,5,5,3,3,1,3,2,11,3,2,10,1,3,1,2,9,6,5,1,4,2,8,0,2,4,1,3,3,0,0,4,0,1,3,0,4,0,4,6,7,9,9,4,0,7,10,8,3 118 0.217597 1 chr1 173462324 173462454 - AL022310.1,AL645568.1,TNFSF4, chr1 173462157 173462492 h38_mk_AluSz + 31 SRR1421177,SRR1084842,SRR1085495,SRR1316940,SRR1326179,SRR1331579,SRR1341763,SRR1348360,SRR1357478,SRR1367943,SRR1368772,SRR1387264,SRR1390601,SRR1399779,SRR1416477,SRR1432123,SRR1435020,SRR1440986,SRR1471817,SRR1474553,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR661973,SRR818210,SRR1402900,SRR1408208,SRR1453851,SRR1464373,SRR1471943, 77 1,0,2,5,2,2,1,0,1,1,1,0,1,0,4,0,1,0,0,0,0,1,5,1,4,1,1,1,0,0,2,5,0,0,1,7,3,1,0,1,3,2,1,2,2,3,3,1,1,1,3,4,0,3,1,5,3,0,1,6,1,0,1,0,2,2,0,0,2,0,3,0,1,0,2,3,1,0,1,2,4,0,1,3,4,3,1,0,4,1,0,1,0,0,1,1,1,2,0,0,2,2,0,0,4,0,0,0,0,7,0,6,0,1,0,3,1 112 5,3,2,6,4,7,5,0,1,6,1,5,5,5,7,7,2,5,1,2,7,1,28,4,8,1,5,3,1,3,5,4,4,2,3,8,8,5,3,5,11,3,2,6,7,4,4,3,2,3,4,2,1,4,10,4,3,2,6,7,4,8,1,8,5,4,0,5,5,3,5,5,4,1,3,9,8,4,1,4,5,2,6,4,4,2,8,0,6,7,5,3,1,5,5,5,7,2,2,9,0,1,0,7,11,3,3,4,11,5,11,6,3,3,7,10,1 113 0.965097 0 chr11 73789335 73789490 + MRPL48, chr11 73789306 73789363 h38_mk_AluJb - 82 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1414897,SRR1415234,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1442571,SRR1444622,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 93 10,12,8,4,4,5,5,6,13,2,4,4,0,1,4,3,0,3,1,6,0,5,17,6,2,4,5,1,3,0,3,9,0,3,0,7,11,0,0,1,5,2,8,1,4,7,10,2,0,4,21,0,0,0,3,0,8,10,3,9,6,2,0,8,0,2,7,0,6,2,5,4,4,6,1,0,3,1,1,8,4,4,0,2,9,3,2,0,3,4,8,0,6,3,2,9,6,5,0,7,0,8,1,10,5,6,0,0,4,14,6,3,2,6,11,16,8 107 19,15,5,7,11,8,7,4,12,7,1,6,3,0,5,6,2,8,3,0,12,20,39,7,10,10,10,3,8,1,0,6,6,13,3,7,13,2,5,14,8,8,5,5,7,9,17,4,6,3,43,5,4,5,6,9,11,29,5,30,9,15,10,14,6,4,2,6,12,1,9,5,16,10,0,10,10,5,13,7,3,9,3,6,11,5,4,2,5,0,9,2,7,9,7,11,12,6,2,9,0,8,3,13,13,7,0,0,15,8,14,14,0,13,26,18,0 118 0.216864 1 chr1 173806439 173806576 - CENPL, chr1 173806294 173806619 h38_mk_AluJo + 1 SRR1331579, 12 0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0 12 1,0,0,0,0,0,0,1,0,0,0,1,0,0,1,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 104 0.110970 0 chr11 76403660 76403921 + AP002360.1, chr11 76403458 76403784 h38_mk_AluJ - 1 SRR602704, 57 0,0,1,5,1,1,4,1,1,1,1,0,0,0,0,0,0,0,0,0,0,1,4,2,0,0,2,0,1,1,2,0,0,3,1,1,2,2,0,2,1,2,1,2,0,2,0,0,0,1,0,0,0,2,1,3,3,0,0,1,0,1,3,2,0,0,0,0,1,3,0,2,1,1,0,1,0,2,2,2,1,0,2,3,0,2,0,0,0,0,2,0,0,1,0,0,2,0,0,1,0,2,0,0,1,0,0,0,2,0,0,0,0,0,1,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 778113 778218 + AP006621.3, chr11 778075 778389 h38_mk_AluSz - 108 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 6,4,2,8,7,13,5,2,2,14,18,15,5,14,12,7,3,11,2,4,10,11,22,15,10,6,22,5,9,7,10,9,6,4,2,9,9,5,15,7,8,17,7,11,9,10,17,2,7,11,4,10,6,10,13,11,8,9,11,11,12,15,7,6,27,7,2,1,7,14,6,4,16,4,5,10,12,7,6,16,12,11,8,19,18,12,13,6,8,5,20,1,5,5,11,4,8,7,1,6,1,6,2,0,9,10,5,8,8,19,11,11,2,13,6,15,8 113 2,7,4,4,7,10,3,0,6,9,8,7,3,7,7,5,5,6,1,2,5,9,12,2,14,0,7,5,12,7,7,8,3,7,5,9,9,7,8,11,3,13,3,1,11,5,8,7,12,8,7,4,1,10,8,8,4,6,4,6,9,11,5,6,13,6,10,3,6,8,5,13,14,9,7,2,2,9,8,5,8,4,9,11,9,8,9,3,18,2,4,1,2,5,3,1,7,4,5,5,0,10,5,0,13,6,3,13,3,11,6,14,2,3,8,5,3 117 0.998481 0 chr1 178024404 178024753 - AL359075.1,AL359075.2, chr1 178024645 178024799 h38_mk_AluJb + 2 SRR1474777,SRR1474553, 67 3,13,0,7,5,2,2,2,2,6,0,0,6,2,4,0,0,3,3,0,0,7,3,0,5,1,3,0,4,2,1,2,0,2,0,0,1,0,0,3,0,6,0,6,0,0,0,0,2,8,16,0,0,3,0,0,3,0,2,1,3,0,1,0,0,1,0,2,0,2,2,0,7,0,0,3,6,6,2,2,3,5,0,1,2,6,4,0,3,0,0,0,5,0,2,4,4,0,0,6,0,0,0,0,6,4,0,0,4,17,7,0,0,8,4,9,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr11 78102874 78102948 - ALG8, chr11 78102661 78102979 h38_mk_AluSp + 95 SRR1072367,SRR1077405,SRR1084649,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602704,SRR604456,SRR613627,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 114 9,5,26,9,2,8,16,12,10,17,6,5,5,11,6,2,16,12,4,5,8,12,30,20,8,3,5,7,5,12,11,35,4,9,9,6,12,13,8,6,10,10,3,12,4,20,21,8,14,22,4,7,7,9,9,10,10,14,12,10,7,9,19,13,10,3,11,4,7,9,10,23,5,6,6,6,4,19,19,5,8,20,26,3,9,12,4,9,7,6,10,0,11,6,15,8,10,6,10,4,0,2,0,12,7,8,2,3,18,24,18,10,8,11,9,11,4 111 6,2,12,5,1,4,12,5,5,16,3,2,3,10,11,2,7,11,6,3,3,12,13,15,8,4,4,3,5,2,5,10,2,12,7,2,7,1,6,9,6,5,0,12,3,10,9,6,6,19,5,5,2,6,5,3,5,9,10,12,6,23,15,5,8,4,6,7,4,11,8,11,3,7,3,4,9,4,22,4,5,14,19,4,5,9,2,6,4,4,4,0,2,3,7,3,7,14,7,3,0,2,0,0,28,8,2,11,14,3,12,8,0,8,9,9,6 118 0.251958 1 chr11 78148977 78149093 + KCTD21-AS1, chr11 78148946 78149260 h38_mk_AluSz - 7 SRR1084842,SRR1340508,SRR1432123,SRR1435775,SRR1447693,SRR1474777,SRR602516, 47 0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,3,0,0,1,0,2,0,4,0,0,1,0,1,0,1,0,2,0,2,0,4,0,1,0,2,0,1,0,1,1,3,3,0,0,2,0,1,0,0,0,0,3,0,1,1,0,4,0,1,0,0,0,0,2,0,2,1,3,0,0,1,3,1,3,1,2,2,0,0,2,0,0,0,0,0,0,0,0,0,2,2,2,0,0,2,0,0,3,0,0,2,0,0,0,0,5,0,0,2,0,5,0 75 2,0,3,3,1,2,0,0,3,3,1,1,1,0,4,0,3,3,1,0,1,0,5,0,1,2,5,1,0,0,1,3,0,3,1,0,3,0,1,0,0,1,0,0,3,2,0,0,2,0,0,1,1,0,1,3,1,0,1,1,1,3,0,0,0,0,1,1,1,0,2,1,4,1,0,0,3,1,0,1,3,1,1,6,3,2,0,0,5,0,3,0,1,1,1,7,1,5,3,1,1,2,1,0,1,0,0,0,1,1,0,3,0,2,1,3,0 80 0.884583 0 chr1 179877239 179877373 - TOR1AIP2, chr1 179877249 179877576 h38_mk_AluJ + 104 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 113 4,3,5,28,8,8,8,4,5,9,20,7,11,10,13,8,19,7,3,2,14,7,32,3,10,10,14,8,11,5,7,3,6,9,3,9,11,10,2,5,15,3,14,7,5,13,10,2,5,4,5,4,2,7,10,10,8,7,12,10,4,0,1,19,4,3,9,4,8,0,15,1,25,8,5,18,15,2,4,11,5,11,2,17,13,3,10,2,10,5,11,6,6,14,4,10,21,3,10,7,8,8,5,1,12,15,7,27,12,36,37,16,0,20,13,23,0 115 6,0,7,17,5,8,11,3,9,5,10,7,3,7,11,17,22,4,2,5,10,4,31,5,13,7,13,5,10,7,7,7,6,6,3,12,7,17,1,12,10,7,4,10,3,7,9,7,7,9,5,6,2,1,8,10,7,2,8,6,4,1,3,11,7,1,9,5,3,2,14,1,15,7,4,10,10,1,4,5,6,9,3,13,15,9,9,1,15,5,18,1,3,9,12,8,21,3,6,11,2,7,5,0,13,14,2,7,6,20,12,10,1,20,18,25,1 118 0.959260 1 chr1 1852570 1852680 - GNB1, chr1 1852520 1852710 h38_mk_AluJ + 1 SRR1077405, 25 1,2,3,0,1,2,0,0,0,1,0,0,3,0,2,0,0,2,0,0,0,0,8,0,0,0,0,0,1,0,0,0,0,1,0,2,0,0,0,0,0,0,2,2,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,2,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,2,3,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,3,0,3,0,0,0 43 0,2,0,4,1,0,0,0,0,0,2,0,0,0,0,0,1,6,0,0,3,0,10,1,4,4,2,1,4,0,0,0,0,0,0,0,2,0,0,0,3,1,0,1,0,1,3,0,0,2,0,3,0,1,0,1,2,0,2,2,2,0,0,0,0,2,0,3,0,0,1,0,1,0,0,0,4,0,0,1,0,1,0,5,0,1,0,0,1,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,3,0,5,4,1,0 . . . chr1 193027875 193027955 - UCHL5, chr1 193027831 193027992 h38_mk_AluJb + 26 SRR1314163,SRR1315970,SRR1320963,SRR1335446,SRR1337412,SRR1340508,SRR1342045,SRR1356444,SRR1357478,SRR1368772,SRR1386708,SRR1399779,SRR1402900,SRR1408208,SRR1414897,SRR1418127,SRR1447693,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1487362,SRR613627,SRR657635,SRR662233,SRR818210, 113 3,0,9,32,10,22,19,10,14,2,25,14,10,5,27,25,10,14,2,1,12,8,99,7,22,16,29,7,25,10,15,18,11,23,7,19,19,20,0,21,24,12,11,25,9,25,24,7,3,10,1,9,1,9,5,15,24,3,10,16,15,15,9,22,21,8,4,8,6,2,25,13,45,11,2,18,35,9,2,18,21,15,5,17,31,14,3,1,5,5,23,0,7,22,4,19,34,4,5,17,0,10,12,19,21,15,5,7,16,46,45,22,1,18,23,37,3 112 4,3,7,25,7,14,20,7,12,4,25,6,12,5,24,17,11,12,4,0,22,4,75,14,9,14,21,11,25,17,8,9,10,15,4,14,17,16,5,20,18,13,5,18,11,15,22,5,4,6,1,9,3,8,6,11,25,3,5,14,14,17,1,27,8,3,1,8,10,9,22,5,43,9,3,17,27,8,7,14,8,19,0,24,30,12,4,0,2,2,19,0,13,21,17,17,31,4,3,11,0,7,7,11,24,32,6,7,23,47,27,28,1,18,27,38,4 118 0.000000 1 chr11 95882374 95882496 - MTMR2, chr11 95882206 95882545 h38_mk_AluSc8 + 71 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1360563,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1421177,SRR1432123,SRR1434526,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1468514,SRR1468955,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR657635,SRR658307,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 102 5,3,2,5,5,4,6,1,2,2,7,3,3,0,10,2,6,5,0,0,4,3,11,3,3,9,7,2,5,2,4,2,1,2,0,8,5,4,0,1,2,2,3,4,6,5,1,3,5,5,5,8,1,2,3,5,6,2,3,3,2,0,0,9,7,3,1,2,3,0,5,1,8,4,0,3,10,5,0,1,6,7,1,4,6,4,4,1,3,1,3,3,2,8,4,8,7,0,4,1,0,3,8,0,6,4,0,2,5,15,14,10,0,16,8,9,6 101 0,2,3,6,10,2,5,1,4,3,2,5,1,0,8,6,4,2,0,0,5,3,11,7,2,5,4,2,3,1,5,2,3,1,0,3,1,4,0,2,4,2,3,5,3,4,3,4,6,2,3,3,1,1,1,2,5,0,4,2,5,3,0,8,6,2,3,4,4,4,4,0,9,4,3,4,5,2,4,8,5,2,1,2,6,2,4,0,5,1,1,0,2,4,7,4,5,3,2,3,0,2,0,0,7,1,0,12,1,12,9,6,0,18,4,7,7 115 0.523273 0 chr1 19600787 19600971 + MINOS1, chr1 19600596 19600910 h38_mk_AluJb - 44 SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1341365,SRR1341763,SRR1342045,SRR1354446,SRR1360563,SRR1361567,SRR1367943,SRR1387809,SRR1390601,SRR1416477,SRR1421177,SRR1434526,SRR1435293,SRR1442571,SRR1468955,SRR1474553,SRR1474777,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR601500,SRR607337,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR814967, 116 1,4,7,21,4,7,6,8,15,6,9,11,11,8,12,9,11,18,5,2,9,13,35,8,13,8,14,4,12,12,4,13,5,11,8,15,8,7,4,13,9,10,3,15,9,2,7,11,5,11,7,7,6,5,5,16,9,4,9,13,13,9,7,12,5,12,5,5,5,6,12,14,9,12,3,6,16,9,5,9,8,13,5,10,14,32,8,2,11,6,12,2,8,10,7,10,16,4,8,11,0,7,4,3,19,10,8,14,7,23,25,6,5,29,9,10,6 116 3,8,10,25,4,14,8,13,12,6,9,13,3,14,19,10,10,15,16,1,11,8,28,8,17,15,8,10,12,12,8,10,16,15,12,15,7,9,2,17,17,15,5,9,9,8,8,8,5,14,5,7,8,3,5,11,13,12,10,7,29,18,12,21,15,8,3,5,9,6,10,8,14,8,5,7,8,12,10,7,9,19,8,5,19,36,15,7,14,4,16,3,9,13,4,14,7,9,6,14,0,5,6,18,18,28,10,9,8,16,28,7,5,19,10,13,14 118 0.024425 1 chr1 200371046 200371165 - LINC00862, chr1 200370882 200371188 h38_mk_AluJ + 5 SRR1072367,SRR1328895,SRR1337412,SRR1415234,SRR1433796, 31 2,5,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,1,0,0,1,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,1,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,2,0,2,0,1,0,0,2,0,0,1,0,0,1,1,0,2,0,0,0,0,0,0,0,0,0,3,0,1 33 3,3,0,0,1,1,0,0,0,4,0,0,0,0,0,5,2,3,0,1,0,2,0,0,0,2,0,1,1,0,0,0,0,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,4,0,0,2,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,0,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,1,0,0,0,1,0,0,4,0,0,0,0,0,0,0 . . . chr1 200690309 200690430 + AL445483.1, chr1 200690275 200690596 h38_mk_AluSx - 60 SRR1314163,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1336548,SRR1337412,SRR1340508,SRR1341763,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1402900,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1437538,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1457503,SRR1468514,SRR1471817,SRR1474777,SRR1476571,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR601500,SRR604262,SRR604456,SRR657127,SRR657635,SRR661349,SRR661973,SRR662534,SRR814967,SRR818210, 86 0,0,0,0,0,1,3,4,2,0,1,2,3,2,9,0,1,3,0,3,0,1,12,2,2,0,1,0,1,4,2,3,0,7,3,2,4,3,4,3,5,11,1,0,1,4,0,3,2,3,1,2,4,1,5,1,4,1,2,6,8,0,4,1,0,4,4,2,1,2,4,4,0,0,6,0,4,1,4,1,0,3,3,0,4,1,3,4,8,2,1,0,0,3,4,1,1,3,6,1,0,1,0,8,7,0,1,0,1,3,0,1,0,4,0,3,0 89 3,3,3,0,1,1,1,6,3,1,2,3,3,4,41,0,0,1,0,1,0,5,27,0,4,0,1,0,1,10,2,14,4,9,2,0,0,3,3,4,10,6,3,0,1,6,0,13,4,2,0,11,3,5,9,3,3,5,0,2,7,0,3,0,0,2,6,1,2,2,3,3,1,0,5,4,2,1,5,3,2,3,9,3,13,6,1,1,18,2,0,0,2,7,0,1,4,3,3,2,0,0,2,2,11,1,0,2,1,5,0,1,0,2,0,3,0 . . . chr1 201467486 201467583 - PHLDA3, chr1 201467319 201467645 h38_mk_AluSx1 + 14 SRR1320963,SRR1326179,SRR1368772,SRR1386708,SRR1399779,SRR1402900,SRR1413562,SRR1435020,SRR1454803,SRR1455925,SRR600361,SRR602704,SRR604262,SRR607337, 116 8,1,13,11,6,6,3,13,8,15,4,10,5,10,14,6,4,14,2,4,5,16,33,10,9,2,9,7,9,4,15,9,7,9,4,11,9,8,4,20,9,10,5,9,8,11,13,5,9,9,8,3,2,8,6,4,11,24,7,9,7,6,13,17,11,7,6,4,7,6,13,15,15,4,9,7,13,8,6,9,7,14,13,8,28,4,5,4,2,2,8,2,11,8,2,10,10,4,3,11,4,7,0,15,15,6,2,13,9,26,5,3,6,16,14,6,3 115 9,2,11,8,7,1,2,8,4,5,8,5,6,4,10,5,10,2,3,2,7,7,15,10,9,7,10,4,9,3,6,13,7,4,4,3,13,2,2,8,2,19,5,8,19,7,4,4,11,7,6,4,1,9,3,6,5,16,6,5,3,4,6,15,7,5,2,7,6,6,9,15,11,5,5,4,5,12,9,6,9,6,4,5,12,2,4,2,2,5,6,0,4,3,8,7,12,5,7,10,0,1,4,10,21,2,1,2,7,9,6,8,3,7,12,12,1 118 0.054472 1 chr1 20378311 20378432 - LINC01141, chr1 20378142 20378461 h38_mk_AluJo + 29 SRR1084842,SRR1085495,SRR1315970,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1354446,SRR1390601,SRR1408208,SRR1414897,SRR1435775,SRR1439873,SRR1447693,SRR1455925,SRR1487194,SRR1500868,SRR595926,SRR602704,SRR604456,SRR657635,SRR657754,SRR658307,SRR661973,SRR662534,SRR818210,SRR821602, 62 1,0,1,3,1,0,0,0,4,0,0,1,0,2,0,0,1,2,2,0,1,0,3,1,2,0,1,0,2,0,0,1,2,0,1,1,0,1,2,0,2,0,0,2,1,2,1,2,1,5,0,1,0,1,0,0,1,0,0,0,1,1,4,1,2,0,0,1,4,0,0,0,3,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,2,4,0,1,0,0,1,3,1,7,0,0,0,1,0,2,4,0,7,1,1,0,3,0,3,1,2,1 89 6,0,3,2,4,2,4,2,6,2,2,0,0,1,1,0,3,5,1,0,9,0,6,1,8,5,3,3,5,0,2,4,0,2,1,0,4,1,0,5,1,2,2,3,1,0,5,1,0,1,2,2,2,0,3,1,9,1,1,5,0,2,2,2,1,1,0,0,7,0,5,2,8,0,0,1,3,1,0,4,1,5,0,2,3,1,0,0,0,1,4,1,1,2,2,0,2,1,7,1,0,3,1,2,9,2,1,13,3,2,2,3,0,1,0,5,6 71 0.800704 0 chr1 205558167 205558301 - MFSD4A, chr1 205558118 205558338 h38_mk_AluJo + 2 SRR1439873,SRR818210, 44 0,0,0,4,1,0,0,1,1,1,1,0,0,0,9,1,0,2,0,0,0,1,4,1,0,0,0,0,2,1,0,0,3,0,0,2,0,1,0,0,0,1,0,0,2,4,3,0,0,1,0,2,0,0,4,0,0,0,0,2,1,0,0,8,2,0,0,0,1,2,0,0,2,0,0,2,0,2,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,0,0,0,0,1,0,2,0,0,0,13,3,0,4,2,7,0 26 0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,14,0,2,0,1,0,0,0,3,0,0,0,0,5,0,0,0,0,2,0,3,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,8,0,0,8,0,0,0,0,2,2,0,0,0,0,0,0,0,0,0,0,0,3,3,5,0,0,0,0,0,0,5,2,0,6,0,7,0,0,0,0,0,0,10,0,0,0,1,0,0,1,0,0,0,8,0,11,0 . . . chr1 205558451 205558550 - MFSD4A, chr1 205558500 205558571 h38_mk_AluJo + 5 SRR1439873,SRR1474777,SRR1485459,SRR602516,SRR818210, 28 0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,14,0,2,0,1,0,0,0,3,0,0,0,0,5,0,0,0,0,2,0,3,0,0,2,0,0,0,6,0,0,0,0,0,0,0,0,0,0,8,0,0,8,0,0,0,0,2,2,0,0,0,0,0,0,0,0,0,0,0,3,3,5,0,0,0,0,0,0,5,2,0,6,0,7,0,0,0,0,0,0,10,0,0,0,1,0,0,1,0,0,0,8,2,11,0 27 0,0,0,0,0,0,0,1,0,0,3,0,0,4,6,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,1,0,0,3,3,0,0,0,0,0,0,2,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,1,8,0,0,0,0,0,0,0,0,7,0,0,0,3,0,2,0,0,2,0,3,0,0,0,0,0,0,0,0,0,0,0,5,7,0,0,0,0,0,0,0,1,1,0,0,0,0,5,0,0,0,0,9,0 . . . chr1 207340391 207340508 + CD55, chr1 207340344 207340676 h38_mk_AluJ - 100 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1440986,SRR1444622,SRR1447693,SRR1453341,SRR1454803,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 63,13,9,9,12,20,38,9,10,28,4,6,21,5,21,7,16,9,20,9,10,10,51,16,13,15,11,11,11,11,11,13,7,8,7,6,12,8,5,26,20,19,2,15,18,3,13,7,21,5,21,16,2,3,4,8,10,89,9,9,7,5,7,11,8,4,4,6,17,17,20,23,13,11,3,5,12,12,21,7,5,7,8,11,22,33,14,5,75,3,8,7,12,7,12,20,9,11,7,12,0,31,13,42,12,9,3,15,22,9,20,14,8,19,52,6,22 106 18,5,1,2,3,5,16,7,3,4,3,2,2,1,10,2,7,4,2,7,4,7,12,4,4,13,4,4,3,2,4,3,3,2,4,2,4,4,0,3,0,6,1,1,9,0,5,1,3,3,0,3,0,2,3,3,4,16,0,6,2,1,3,0,1,1,5,0,3,2,1,6,9,0,2,2,9,5,2,3,4,1,8,4,10,14,8,1,33,4,4,0,2,2,4,9,4,5,4,5,1,5,2,16,5,3,0,1,3,3,4,9,5,7,21,8,9 118 0.404784 1 chr1 209965893 209966013 + SYT14, chr1 209965865 209966176 h38_mk_AluSc - 2 SRR1387264,SRR1439873, 21 0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,1,0,3,0,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 15 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,2,3,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 . . . chr12 10125087 10125173 - CLEC7A, chr12 10124907 10125209 h38_mk_AluJb + 8 SRR1072367,SRR1085495,SRR1331579,SRR1348159,SRR1487362,SRR1498550,SRR604456,SRR814967, 23 2,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,1,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,4,1,0,2,0,1,0,0,0,0,1,1,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,3 56 6,1,3,0,1,1,0,0,0,0,0,2,1,0,3,0,3,1,2,0,1,0,1,0,1,4,4,0,1,0,0,0,1,1,0,2,1,2,2,0,3,0,0,0,0,0,5,0,1,0,0,2,0,0,1,1,6,1,1,0,0,0,0,0,0,2,0,0,1,0,0,0,1,1,3,0,0,0,0,2,0,2,0,1,0,12,1,0,2,0,1,0,1,1,0,0,2,0,5,0,0,0,7,0,0,0,1,1,1,0,0,1,0,3,1,1,0 79 0.644445 0 chr12 101756420 101756566 - GNPTAB, chr12 101756416 101756590 h38_mk_AluJb + 15 SRR1320115,SRR1337412,SRR1340508,SRR1348159,SRR1360128,SRR1408208,SRR1408368,SRR1413562,SRR1421177,SRR1435775,SRR1453851,SRR1455925,SRR1457503,SRR1468955,SRR613627, 25 0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,3,8,0,0,2,2,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,1,0,3,0 117 3,1,13,24,12,9,3,10,19,15,10,4,12,9,11,9,14,11,4,9,14,20,45,7,7,14,22,4,19,11,8,18,16,21,7,7,10,11,5,19,24,21,7,13,15,12,9,18,12,11,20,9,7,6,15,13,20,10,14,11,18,17,10,19,20,17,2,5,5,4,20,8,20,15,5,17,24,14,15,13,4,13,8,20,21,9,13,8,14,12,11,4,11,11,11,13,12,19,6,25,1,20,17,3,15,27,7,5,20,18,17,21,15,18,21,10,2 118 0.212747 1 chr12 102050518 102050639 - WASHC3, chr12 102050483 102050677 h38_mk_AluJb + 1 SRR1498550, 10 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 23 0,4,0,0,0,0,0,0,0,0,0,4,3,3,0,5,0,1,0,0,0,0,10,0,0,0,0,3,0,0,2,0,1,0,0,0,2,0,0,0,0,0,1,0,0,2,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,0,10,0,5,0,0,0,0,0,1,0,0,0,0,0,4,0,0,0,0,0,4,0,0,0,0,0,0,5,0 . . . chr12 10374035 10374136 + AC022075.1, chr12 10373996 10374322 h38_mk_AluSz - 34 SRR1072367,SRR1077405,SRR1316940,SRR1326179,SRR1331579,SRR1335446,SRR1337412,SRR1341763,SRR1357478,SRR1360128,SRR1368772,SRR1387264,SRR1399779,SRR1408368,SRR1413562,SRR1416754,SRR1432123,SRR1435020,SRR1435293,SRR1437538,SRR1440986,SRR1447693,SRR1471817,SRR1471943,SRR1476571,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR604456,SRR657754,SRR661349,SRR661973,SRR663633, 84 3,10,0,0,1,0,1,2,1,14,1,2,4,1,1,0,4,1,5,0,1,3,1,1,3,1,0,0,0,1,2,4,1,1,1,2,1,1,0,1,3,0,0,1,1,0,2,4,3,1,1,0,2,3,1,0,1,2,2,1,5,1,5,1,1,1,1,0,3,2,2,0,1,0,0,0,1,0,6,1,0,0,2,1,0,2,2,1,2,2,2,1,0,1,0,1,0,3,2,4,0,0,1,0,0,3,1,0,1,1,2,0,2,1,1,0,1 80 3,12,0,0,0,0,3,0,1,16,0,2,1,1,3,0,2,0,1,1,1,9,2,3,1,1,1,0,0,0,1,3,5,1,0,4,5,0,2,0,4,4,0,3,10,2,0,4,3,3,9,0,1,2,5,0,6,3,0,1,5,2,5,0,3,2,0,3,8,5,2,1,0,1,1,0,1,0,10,2,1,0,4,1,1,6,4,0,5,3,3,0,2,1,0,1,0,2,5,3,0,0,3,0,17,2,1,0,3,3,0,0,4,7,0,4,0 99 0.990180 0 chr12 10412496 10412616 - AC068775.2, chr12 10412495 10412750 h38_mk_AluJb + 1 SRR1415234, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 22,23,7,17,5,9,30,10,14,56,6,13,17,17,20,5,3,16,44,24,15,18,23,43,4,22,25,6,3,12,20,27,6,5,17,19,36,22,8,19,50,51,3,15,24,7,11,29,39,23,38,5,14,9,16,10,26,20,18,23,22,19,13,19,14,13,13,18,20,31,22,9,7,18,15,3,13,5,25,7,9,22,19,6,9,26,5,20,12,13,15,19,19,16,6,10,6,25,6,25,0,5,10,65,26,23,8,13,18,24,7,15,16,14,13,8,33 . . . chr12 10667289 10667455 - STYK1, chr12 10667334 10667659 h38_mk_AluJb + 1 SRR1326179, 14 0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0 5 0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 76 0.045484 0 chr12 108594337 108594545 - TMEM119, chr12 108594264 108594592 h38_mk_AluJb + 3 SRR1337098,SRR1368772,SRR821602, 28 1,0,0,1,2,1,0,0,0,0,0,1,0,0,2,0,0,0,3,0,1,1,0,0,0,1,1,0,1,0,0,0,1,0,0,0,4,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,2,0,1,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1 46 1,0,1,1,2,1,1,1,0,0,0,2,0,0,0,0,4,0,0,0,3,1,0,0,1,2,4,0,1,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,2,2,0,0,1,0,1,0,0,0,0,2,0,1,1,2,0,1,0,0,1,0,1,2,0,0,0,0,0,0,0,1,2,3,1,0,0,1,1,1,0,0,0,2,1,3,1,0,0,1,0,0,0,0,3,0,0,0,2,0,0,0,0,4 95 0.295550 0 chr12 108594447 108594545 - TMEM119, chr12 108594264 108594592 h38_mk_AluJb + 1 SRR604456, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 46 1,0,1,1,2,1,1,1,0,0,0,2,0,0,0,0,4,0,0,0,3,1,0,0,1,2,4,0,1,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,2,2,0,0,1,0,1,0,0,0,0,2,0,1,1,2,0,1,0,0,1,0,1,2,0,0,0,0,0,0,0,1,2,3,1,0,0,1,1,1,0,0,0,2,1,3,1,0,0,1,0,0,0,0,3,0,0,0,2,0,0,0,0,4 92 0.215972 0 chr12 110167871 110168241 + IFT81, chr12 110167818 110168166 h38_mk_AluJo - 2 SRR1341763,SRR661349, 83 1,0,3,6,0,0,1,1,0,1,3,1,0,2,2,5,2,4,0,0,2,0,12,1,2,0,4,1,4,0,3,6,0,4,0,3,1,4,0,2,3,3,2,2,2,2,4,2,2,4,0,3,1,1,3,0,3,0,4,3,4,1,1,0,2,0,0,0,0,2,4,0,8,2,2,4,0,3,0,2,5,4,2,2,1,1,0,2,0,2,0,0,1,3,2,2,2,2,1,2,0,0,0,0,4,4,1,2,2,7,6,3,0,6,2,6,0 13 1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0 118 0.082256 1 chr12 11034782 11034885 - AC018630.6,PRH1,PRR4,TAS2R14, chr12 11034623 11034890 h38_mk_AluJ + 105 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1414897,SRR1415234,SRR1416477,SRR1418837,SRR1432123,SRR1435775,SRR1437538,SRR1447693,SRR1453851,SRR1455925,SRR1464373,SRR1468955,SRR1471817,SRR1471943,SRR1474777,SRR1476571,SRR1487194,SRR1487362,SRR595926,SRR600361,SRR601500,SRR602516,SRR607337,SRR614802,SRR657127,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR818033,SRR818210,SRR1375571,SRR1387809,SRR1413562,SRR1418127,SRR1440986,SRR1444622,SRR1077405,SRR1314163,SRR1328895,SRR1337098,SRR1354446,SRR1368772,SRR1381673,SRR1399779,SRR1416754,SRR1421177,SRR1433796,SRR1435293,SRR1439873,SRR1442571,SRR1457482,SRR1457503,SRR1468514,SRR1474553,SRR1485459,SRR1500868,SRR604262,SRR613627,SRR657777,SRR1072367,SRR1084649,SRR1316940,SRR1317344,SRR1333741,SRR1335446,SRR1360128,SRR1434526,SRR1435020,SRR1453341,SRR1487685,SRR602314,SRR602704,SRR604456,SRR657635,SRR814967, 110 6,2,3,12,1,2,3,3,3,4,1,4,4,8,10,5,6,5,2,0,3,3,22,4,6,9,7,5,7,1,0,9,3,6,5,5,3,2,5,6,2,5,2,6,5,5,6,1,6,2,8,6,6,4,5,6,4,4,6,3,5,8,5,9,7,2,2,0,4,3,12,0,9,3,2,3,11,8,4,2,9,6,4,6,5,9,1,1,1,2,7,0,3,1,4,4,1,1,3,5,1,3,4,28,9,8,6,0,6,13,12,7,1,18,6,11,0 114 8,5,2,16,6,9,11,8,10,3,8,6,7,9,5,7,10,9,4,0,5,5,33,7,14,10,15,6,10,5,3,20,9,7,8,9,12,5,4,17,8,15,4,8,14,7,14,4,12,8,8,7,6,5,2,10,18,4,10,5,15,10,8,13,13,4,3,4,12,9,15,6,13,6,3,8,16,14,12,9,3,7,6,9,10,24,8,4,6,2,15,1,3,7,8,7,10,2,10,10,0,6,3,6,15,4,8,11,11,25,28,8,0,17,13,19,10 118 0.375290 1 chr12 110616277 110616352 + TCTN1, chr12 110616241 110616555 h38_mk_AluJb - 5 SRR1326179,SRR1498550,SRR601500,SRR657754,SRR662233, 34 0,0,0,2,0,0,1,0,0,0,0,0,0,0,1,1,0,1,0,0,2,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,1,0,0,1,0,0,1,0,0,0,0,0,0,0,4,1,0,0,1,0,1,3,0,0,0,0,0,0,2,1,0,0,0,0,0,2,0,1,1,0,1,0,0,0,0,0,2,2,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,1,1,0,2,4,4,0,0,0,0,0,0 22 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,2,0,0,0,0,5,0,0,2,0,0,0 114 0.055706 0 chr12 111710273 111710365 + ACAD10, chr12 111710069 111710396 h38_mk_AluJo - 5 SRR1342045,SRR1447693,SRR607337,SRR613627,SRR614802, 55 0,0,0,0,1,1,0,0,1,0,0,2,1,0,1,0,2,2,0,0,0,0,2,0,0,2,0,2,0,1,1,0,0,0,0,0,1,0,2,1,1,0,1,2,0,1,0,0,0,0,1,0,1,1,0,1,1,0,0,1,0,1,0,1,0,0,0,3,1,0,2,0,0,0,0,1,0,1,0,3,1,2,2,2,1,0,1,0,1,1,0,1,0,0,2,4,2,4,1,4,0,3,2,0,3,0,0,0,2,4,2,0,0,0,0,0,0 28 0,0,0,0,0,0,0,0,2,1,0,0,0,0,2,0,0,0,0,0,0,1,2,0,0,1,0,0,1,0,1,0,0,1,0,0,0,0,0,1,1,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,1,0,0,0,4,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,1,0,2,2,0,1,0,0,0,1,0,5,0,0,0,0,2,0 114 0.133141 0 chr12 111710273 111710437 + ACAD10, chr12 111710069 111710396 h38_mk_AluJo - 1 SRR613627, 55 0,0,0,0,1,1,0,0,1,0,0,2,1,0,1,0,2,2,0,0,0,0,2,0,0,2,0,2,0,1,1,0,0,0,0,0,1,0,2,1,1,0,1,2,0,1,0,0,0,0,1,0,1,1,0,1,1,0,0,1,0,1,0,1,0,0,0,3,1,0,2,0,0,0,0,1,0,1,0,3,1,2,2,2,1,0,1,0,1,1,0,1,0,0,2,4,2,4,1,4,0,3,2,0,3,0,0,0,2,4,2,0,0,0,0,0,0 16 0,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,2,1,5,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 114 0.108629 0 chr12 111730773 111730894 + ACAD10, chr12 111730741 111731100 h38_mk_AluSz - 1 SRR1399779, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.005310 0 chr12 111840134 111840477 - MAPKAPK5-AS1, chr12 111840354 111840655 h38_mk_AluJb + 25 SRR1316940,SRR1318163,SRR1341365,SRR1354446,SRR1356444,SRR1360563,SRR1386708,SRR1387264,SRR1413562,SRR1414897,SRR1416477,SRR1418837,SRR1439873,SRR1440986,SRR1454803,SRR1457482,SRR1468955,SRR1485459,SRR1487362,SRR1487685,SRR595926,SRR602314,SRR657635,SRR661349,SRR662534, 39 0,0,0,0,0,0,0,1,0,1,1,1,0,0,0,0,0,0,0,0,0,0,2,3,1,0,0,0,3,2,0,3,0,4,0,2,1,0,0,1,1,0,0,0,0,0,1,0,1,3,0,2,0,0,1,0,0,0,0,0,0,0,2,3,4,0,0,0,0,0,0,6,2,1,0,0,0,2,1,0,0,0,0,2,0,1,1,0,0,0,4,0,0,0,3,0,0,0,0,2,0,0,0,0,5,0,0,0,3,0,4,3,0,0,1,0,0 117 44,20,70,116,48,73,70,86,70,64,81,35,46,55,102,56,64,88,25,25,49,44,237,66,85,49,71,62,118,58,59,129,40,91,38,71,97,68,17,109,82,64,41,78,52,45,96,33,29,60,41,81,30,53,39,75,67,77,48,102,98,74,54,83,90,42,27,29,63,61,85,146,97,52,31,56,73,79,40,56,52,105,33,90,69,82,30,33,90,26,90,7,50,76,46,101,64,84,54,69,7,60,35,102,114,84,29,98,77,79,101,93,31,78,139,101,23 118 0.812923 1 chr12 111840333 111840477 - MAPKAPK5-AS1, chr12 111840354 111840655 h38_mk_AluJb + 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 31,4,36,43,39,26,36,59,33,44,43,12,33,33,51,23,26,40,10,12,37,25,128,40,36,23,49,40,47,39,29,67,29,49,21,36,51,25,16,58,39,46,18,28,35,35,56,27,21,35,23,21,25,34,21,32,53,25,21,55,59,47,38,61,52,21,16,10,28,37,41,60,37,36,20,25,47,54,34,22,23,37,21,44,48,25,21,25,38,25,38,4,41,34,25,39,24,25,32,44,2,33,22,114,37,36,17,30,29,20,59,35,24,52,66,48,9 117 44,20,70,116,48,73,70,86,70,64,81,35,46,55,102,56,64,88,25,25,49,44,237,66,85,49,71,62,118,58,59,129,40,91,38,71,97,68,17,109,82,64,41,78,52,45,96,33,29,60,41,81,30,53,39,75,67,77,48,102,98,74,54,83,90,42,27,29,63,61,85,146,97,52,31,56,73,79,40,56,52,105,33,90,69,82,30,33,90,26,90,7,50,76,46,101,64,84,54,69,7,60,35,102,114,84,29,98,77,79,101,93,31,78,139,101,23 118 0.957872 1 chr12 111840333 111840699 - MAPKAPK5-AS1, chr12 111840354 111840655 h38_mk_AluJb + 1 SRR1433796, 117 31,4,36,43,39,26,36,59,33,44,43,12,33,33,51,23,26,40,10,12,37,25,128,40,36,23,49,40,47,39,29,67,29,49,21,36,51,25,16,58,39,46,18,28,35,35,56,27,21,35,23,21,25,34,21,32,53,25,21,55,59,47,38,61,52,21,16,10,28,37,41,60,37,36,20,25,47,54,34,22,23,37,21,44,48,25,21,25,38,25,38,4,41,34,25,39,24,25,32,44,2,33,22,114,37,36,17,30,29,20,59,35,24,52,66,48,9 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr12 111965595 111965759 - TMEM116, chr12 111965633 111965975 h38_mk_AluSz + 2 SRR1432123,SRR818033, 95 4,0,0,2,0,2,3,0,2,1,6,1,6,4,6,1,2,2,1,2,4,0,5,4,1,0,4,3,1,7,4,0,0,1,0,0,3,7,1,3,2,3,2,0,1,2,3,2,2,2,1,1,0,4,4,1,5,5,4,2,4,1,0,3,2,0,4,1,1,1,6,1,3,0,1,2,6,1,2,1,3,2,2,3,6,2,2,0,3,4,3,0,0,3,9,2,5,7,3,7,0,2,2,0,5,7,2,0,1,15,3,0,3,8,10,4,2 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0 117 0.213658 0 chr12 112410320 112410405 - RPL6, chr12 112410365 112410436 h38_mk_AluSz6 + 12 SRR1077405,SRR1340508,SRR1348159,SRR1390601,SRR1408208,SRR1415234,SRR1474777,SRR1488651,SRR657754,SRR814967,SRR818210,SRR821602, 113 16,32,31,11,2,8,39,4,60,15,7,1,3,7,4,1,9,57,1,8,1,3,14,8,10,2,12,5,44,3,7,79,0,5,8,72,8,40,3,34,89,6,25,10,4,86,15,3,1,52,51,2,3,5,3,3,7,26,3,5,6,0,2,81,4,1,1,5,3,6,6,8,9,8,1,3,74,4,3,4,2,42,1,7,70,2,6,18,7,1,10,1,6,13,49,85,7,0,8,2,6,6,46,0,7,44,14,5,12,9,10,3,7,46,5,17,36 77 3,3,0,3,2,1,0,1,0,6,0,2,1,3,4,0,4,2,2,0,0,3,5,1,2,2,2,1,2,1,1,0,0,1,0,1,0,1,2,1,1,2,1,3,5,2,5,2,0,2,8,0,1,0,4,1,1,1,2,0,0,0,2,1,2,0,0,3,2,3,0,0,0,3,1,2,3,1,2,1,0,3,4,0,3,0,0,3,3,0,3,0,0,1,0,0,2,0,1,0,0,1,0,3,5,7,0,0,0,7,2,0,0,7,1,3,1 . . . chr12 113225244 113225336 + TPCN1, chr12 113225041 113225368 h38_mk_AluJ4 - 55 SRR1072367,SRR1084842,SRR1085495,SRR1316940,SRR1317344,SRR1320963,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1413562,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1474777,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602704,SRR604456,SRR613627,SRR614802,SRR661349,SRR662233,SRR662534,SRR818210, 84 5,0,3,1,3,1,0,0,4,2,1,0,0,3,1,0,0,0,1,0,2,4,7,3,3,0,2,1,2,3,5,0,1,0,1,0,1,2,3,5,2,1,0,3,1,1,3,1,2,0,1,2,0,2,5,3,0,0,3,3,0,1,2,3,0,5,3,1,1,2,4,2,0,8,2,2,4,1,2,0,0,3,2,1,6,0,5,0,2,2,1,2,0,5,0,1,4,0,3,1,1,1,2,0,1,0,1,0,1,0,3,1,0,1,1,3,4 103 7,0,0,8,3,7,2,0,1,3,4,2,6,6,5,1,1,2,0,1,2,4,11,0,6,2,3,1,2,2,9,2,1,2,0,4,0,3,2,5,3,6,3,7,5,7,1,3,7,2,2,2,0,3,11,2,1,1,7,5,1,3,3,3,2,2,9,0,1,7,3,2,2,6,7,4,9,0,2,1,1,2,1,5,7,3,13,0,4,1,2,0,2,8,4,1,7,5,2,6,1,4,3,0,5,10,1,3,3,17,6,2,0,5,3,7,1 117 0.482068 0 chr12 113294106 113294228 + TPCN1, chr12 113294073 113294337 h38_mk_AluJ - 6 SRR1320963,SRR1326179,SRR1442571,SRR1487194,SRR601500,SRR661973, 20 0,0,0,1,0,2,0,0,0,0,0,0,1,3,4,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,2,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,3,0,3,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,2,0,3,0,0,0 41 2,1,0,0,0,0,2,0,0,0,2,0,0,2,4,0,0,0,0,0,0,4,2,3,2,0,4,0,0,2,3,0,1,0,0,3,1,0,0,1,0,1,0,0,2,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,2,1,4,0,0,0,0,0,0,0,0,2,0,4,0,0,2,0,0,0,1,2,1,0,3,6,0,0,0,1,2,1,0,0,0,0,0,0,0,0,0,2,0,0,2,0,2,0,1,0,0,0,2,0 118 0.013432 1 chr12 113818103 113818186 - RBM19, chr12 113817938 113818251 h38_mk_AluSz + 5 SRR1415234,SRR1435293,SRR602516,SRR614802,SRR657777, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,6,0,0,0,0,0,0,1,0,0,0,6,0,0,0,0,1,0,0,0,0,0 116 10,2,3,15,8,7,17,12,25,13,26,13,6,5,15,9,7,9,6,7,13,4,27,16,14,7,15,12,13,9,28,13,1,12,5,4,1,5,15,11,16,14,11,14,18,8,6,6,6,8,5,11,11,13,7,11,9,4,16,11,3,7,11,5,8,3,6,3,9,15,19,7,11,16,2,12,20,7,4,13,3,36,5,19,21,16,8,10,8,2,13,2,17,7,9,5,15,10,5,14,2,9,5,0,14,7,6,6,16,52,44,15,2,12,22,18,1 . . . chr12 11549590 11549721 + LINC01252, chr12 11549548 11549890 h38_mk_AluS - 2 SRR595926,SRR607337, 14 0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1 85 1,1,3,7,3,2,6,4,6,2,9,1,2,2,2,9,0,4,1,0,2,0,2,1,0,1,2,4,2,1,4,1,0,2,0,4,2,0,0,3,0,2,0,3,0,0,3,0,0,3,0,5,0,4,4,1,6,0,2,3,2,3,2,2,2,0,0,2,1,0,2,1,4,1,0,2,2,2,0,5,5,3,0,6,2,2,0,0,0,1,5,0,2,1,3,7,4,4,0,4,0,5,8,0,7,1,1,0,2,3,13,5,3,7,5,4,0 . . . chr12 11552580 11552693 + LINC01252, chr12 11552512 11552721 h38_mk_AluSx - 41 SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1326179,SRR1328895,SRR1340508,SRR1348159,SRR1348360,SRR1356619,SRR1360563,SRR1368772,SRR1386708,SRR1387809,SRR1390601,SRR1408208,SRR1414897,SRR1416477,SRR1418837,SRR1432123,SRR1439873,SRR1455925,SRR1464373,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR595926,SRR600361,SRR602314,SRR602516,SRR602704,SRR607337,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 85 1,1,3,7,3,2,6,4,6,2,9,1,2,2,2,9,0,4,1,0,2,0,2,1,0,1,2,4,2,1,4,1,0,2,0,4,2,0,0,3,0,2,0,3,0,0,3,0,0,3,0,5,0,4,4,1,6,0,2,3,2,3,2,2,2,0,0,2,1,0,2,1,4,1,0,2,2,2,0,5,5,3,0,6,2,2,0,0,0,1,5,0,2,1,3,7,4,4,0,4,0,5,8,0,7,1,1,0,2,3,13,5,3,7,5,4,0 78 0,0,0,4,3,2,10,0,4,2,5,0,1,1,1,6,0,1,0,0,2,0,4,0,0,0,3,3,3,0,2,1,2,3,0,1,1,1,1,1,0,3,4,2,3,1,2,0,1,2,0,2,1,1,2,0,2,1,0,2,0,0,0,3,3,1,1,0,1,0,1,0,2,1,0,2,2,2,0,7,4,1,0,2,5,0,4,0,0,2,1,0,1,4,6,4,4,0,2,2,0,2,1,0,1,1,1,0,1,0,4,4,0,3,5,5,0 . . . chr12 11555255 11555414 + LINC01252, chr12 11555218 11555377 h38_mk_AluJ - 9 SRR1102055,SRR1348159,SRR1390601,SRR1408208,SRR1439873,SRR1464373,SRR1474553,SRR601500,SRR602516, 83 0,1,1,7,5,3,10,4,4,2,6,1,0,3,1,2,2,2,0,0,2,0,8,2,4,2,5,1,3,2,4,2,1,1,0,1,5,3,0,4,1,2,0,2,4,4,6,1,2,5,0,0,1,0,1,3,2,0,3,1,0,1,0,3,13,2,0,0,1,4,2,0,9,0,0,5,0,2,0,9,1,1,0,6,2,1,0,0,0,0,4,0,3,3,2,3,7,1,1,2,1,3,0,2,1,3,0,1,0,0,2,7,0,6,1,0,0 13 0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr12 11555255 11555459 + LINC01252, chr12 11555218 11555377 h38_mk_AluJ - 3 SRR1328895,SRR1375571,SRR600361, 83 0,1,1,7,5,3,10,4,4,2,6,1,0,3,1,2,2,2,0,0,2,0,8,2,4,2,5,1,3,2,4,2,1,1,0,1,5,3,0,4,1,2,0,2,4,4,6,1,2,5,0,0,1,0,1,3,2,0,3,1,0,1,0,3,13,2,0,0,1,4,2,0,9,0,0,5,0,2,0,9,1,1,0,6,2,1,0,0,0,0,4,0,3,3,2,3,7,1,1,2,1,3,0,2,1,3,0,1,0,0,2,7,0,6,1,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr12 118017690 118017815 + RFC5, chr12 118017666 118017841 h38_mk_AluJ4 - 9 SRR1072367,SRR1361567,SRR1381673,SRR1444622,SRR1498550,SRR602314,SRR604456,SRR614802,SRR818210, 95 1,0,0,6,1,5,10,1,4,1,7,2,2,0,6,5,3,8,0,3,2,1,13,3,0,1,5,0,8,1,3,2,1,6,3,2,4,2,3,4,3,2,3,7,1,2,4,0,0,4,1,3,1,4,6,2,6,2,3,3,3,0,0,4,4,1,2,1,3,2,3,2,7,1,0,8,6,3,0,3,5,0,0,8,4,2,0,1,3,2,6,0,6,7,3,11,15,1,6,4,0,4,2,0,9,3,0,0,12,15,3,6,0,11,3,10,0 81 2,0,1,2,0,0,3,0,2,3,2,2,2,2,3,2,0,3,0,0,1,0,3,1,0,0,1,0,2,3,1,0,1,1,1,1,2,1,2,3,5,1,1,3,0,1,3,2,0,0,1,2,1,2,1,1,2,1,0,2,0,0,1,6,2,2,4,1,0,2,2,1,1,0,0,0,6,0,0,2,2,0,1,2,0,0,3,2,2,1,0,0,0,2,4,0,2,2,4,7,1,2,3,0,5,0,0,0,1,4,8,2,2,3,3,1,0 116 0.600318 0 chr12 118017690 118018053 + RFC5, chr12 118017666 118017841 h38_mk_AluJ4 - 18 SRR1099499,SRR1102055,SRR1331579,SRR1340508,SRR1354446,SRR1357478,SRR1381673,SRR1418127,SRR1464373,SRR1485459,SRR602314,SRR602516,SRR613627,SRR614802,SRR661349,SRR661973,SRR814967,SRR818210, 95 1,0,0,6,1,5,10,1,4,1,7,2,2,0,6,5,3,8,0,3,2,1,13,3,0,1,5,0,8,1,3,2,1,6,3,2,4,2,3,4,3,2,3,7,1,2,4,0,0,4,1,3,1,4,6,2,6,2,3,3,3,0,0,4,4,1,2,1,3,2,3,2,7,1,0,8,6,3,0,3,5,0,0,8,4,2,0,1,3,2,6,0,6,7,3,11,15,1,6,4,0,4,2,0,9,3,0,0,12,15,3,6,0,11,3,10,0 98 0,0,0,7,6,7,12,2,3,1,6,4,0,4,3,11,2,6,1,2,4,2,18,4,3,3,6,3,10,4,5,1,2,3,1,10,8,1,2,4,2,4,1,7,3,3,7,0,0,5,1,6,1,4,2,9,6,0,4,2,0,8,4,8,4,2,0,2,2,5,7,0,8,5,0,11,6,2,0,5,7,6,0,7,6,3,1,0,2,1,8,0,2,12,7,11,6,3,5,2,0,11,8,0,6,11,1,0,9,22,21,12,0,17,10,12,2 114 0.691577 0 chr12 118032485 118032618 + RFC5, chr12 118032453 118032852 h38_mk_AluJo - 1 SRR1444622, 26 0,0,2,1,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,3,0,0,3,0,0,0,2,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,2,0,0,0,1,0,2,0,0,0,0,0,0,0,5,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,1,0,0,0,3,0 64 0,0,0,4,0,0,2,0,2,5,0,0,0,0,3,6,0,19,2,3,4,2,79,2,5,0,4,4,4,4,0,50,0,3,0,19,0,0,0,43,0,3,0,28,38,0,0,6,16,0,23,0,17,21,30,21,43,4,3,0,0,1,0,3,0,4,14,0,24,0,0,26,2,0,1,0,1,39,0,0,0,4,27,4,24,23,3,3,0,0,1,0,0,0,0,3,13,3,0,0,0,0,1,0,5,43,0,0,0,45,38,1,2,0,0,29,0 . . . chr12 118032513 118032618 + RFC5, chr12 118032453 118032852 h38_mk_AluJo - 1 SRR1316940, 1 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 64 0,0,0,4,0,0,2,0,2,5,0,0,0,0,3,6,0,19,2,3,4,2,79,2,5,0,4,4,4,4,0,50,0,3,0,19,0,0,0,43,0,3,0,28,38,0,0,6,16,0,23,0,17,21,30,21,43,4,3,0,0,1,0,3,0,4,14,0,24,0,0,26,2,0,1,0,1,39,0,0,0,4,27,4,24,23,3,3,0,0,1,0,0,0,0,3,13,3,0,0,0,0,1,0,5,43,0,0,0,45,38,1,2,0,0,29,0 . . . chr12 118261497 118261673 - TAOK3, chr12 118261504 118261640 h38_mk_AluJ + 12 SRR1317344,SRR1320963,SRR1337098,SRR1348360,SRR1408208,SRR1413562,SRR1435293,SRR1457503,SRR1487685,SRR657754,SRR814967,SRR818210, 60 0,2,0,2,1,1,5,0,0,0,2,4,3,2,0,0,2,0,0,0,3,2,3,2,2,0,2,2,0,0,0,0,1,0,1,1,0,1,0,1,1,0,0,1,1,3,3,0,1,1,0,0,0,0,1,3,2,0,0,1,2,0,0,1,2,2,2,1,0,0,0,1,2,0,1,1,0,0,0,2,1,4,0,0,1,0,6,0,0,0,2,2,1,0,0,0,1,0,1,1,0,0,0,0,1,8,0,0,3,0,2,0,0,3,0,4,0 66 3,1,0,0,2,3,0,0,4,0,4,3,2,2,4,0,0,0,2,1,2,1,1,1,1,1,4,2,2,3,1,0,1,0,2,0,0,0,0,2,0,2,0,3,0,2,2,0,2,0,4,1,0,1,2,0,4,0,1,0,7,0,0,0,1,0,5,2,3,1,2,0,0,0,4,4,3,1,0,0,0,0,1,0,0,0,3,0,3,2,4,0,0,0,0,0,2,0,0,2,1,1,3,0,1,7,0,0,0,3,9,0,0,8,2,6,5 117 0.147233 0 chr12 120454933 120455030 + GATC, chr12 120454895 120455192 h38_mk_AluSx - 13 SRR1084842,SRR1085495,SRR1337098,SRR1360128,SRR1375571,SRR1389979,SRR1418127,SRR1453341,SRR1464373,SRR1500868,SRR662534,SRR663633,SRR818210, 93 2,2,0,6,4,1,4,3,2,1,0,0,0,2,7,1,6,2,1,1,7,0,7,2,3,2,3,1,6,2,2,2,3,3,0,1,2,4,3,4,3,7,5,8,5,3,6,2,2,3,0,2,1,3,1,4,2,2,0,3,3,1,0,8,3,0,2,1,3,5,4,0,6,0,0,3,4,2,1,5,0,0,0,3,11,3,0,0,3,1,6,0,2,3,2,3,6,16,1,0,0,4,6,0,1,3,0,0,1,1,15,5,2,3,2,7,3 103 2,1,3,10,3,3,2,1,4,5,6,5,3,5,9,3,2,6,1,0,10,1,8,5,7,4,5,1,7,1,3,2,3,0,4,3,5,3,0,4,9,0,3,5,3,4,5,1,1,3,3,3,0,3,4,1,5,3,2,4,1,4,0,7,5,1,1,0,0,4,7,1,8,0,0,3,8,5,2,8,2,1,2,3,7,5,4,0,5,8,4,1,5,10,3,2,12,4,1,2,0,3,4,0,6,2,0,1,7,13,7,7,1,7,8,10,1 118 0.271401 1 chr12 121595424 121595554 + AC145422.1, chr12 121595208 121595545 h38_mk_AluY - 2 SRR1337098,SRR1340508, 77 0,0,1,2,0,2,2,1,1,2,1,0,2,1,2,3,0,0,0,1,1,0,7,0,2,0,1,0,0,0,1,1,0,1,0,1,2,1,0,1,1,4,2,1,2,5,1,2,3,1,1,2,1,5,1,2,2,1,3,2,4,3,1,0,2,1,0,2,0,1,0,0,1,2,0,0,3,1,1,1,0,3,1,1,1,1,2,1,3,2,3,0,2,1,1,1,0,0,0,0,1,1,0,0,5,2,0,0,1,0,0,0,0,2,0,0,0 22 0,0,0,0,2,1,0,0,0,0,1,2,0,2,0,0,0,2,0,0,1,0,6,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,5,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,0 95 0.724768 0 chr12 122513767 122513874 - RSRC2, chr12 122513830 122514046 h38_mk_AluJo + 72 SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1387264,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1415234,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1435293,SRR1440986,SRR1442571,SRR1444678,SRR1453341,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR599510,SRR601500,SRR602314,SRR604456,SRR607337,SRR612563,SRR613627,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR814967,SRR821602, 115 12,6,14,18,5,28,14,11,18,15,10,12,12,28,22,8,8,14,14,0,8,10,22,9,18,20,15,4,5,10,18,18,12,10,10,14,5,4,6,26,13,21,5,17,42,17,15,7,12,7,18,8,10,10,25,16,17,5,21,10,7,5,18,12,13,21,5,3,17,26,6,6,13,9,20,4,39,13,0,9,16,13,7,6,15,38,30,11,8,9,14,4,15,8,11,4,15,1,6,9,1,5,7,8,24,40,31,32,11,35,4,19,18,24,8,11,28 99 2,2,1,5,2,4,7,4,1,2,3,7,2,7,2,3,3,2,3,0,4,4,6,3,4,4,1,5,1,4,7,3,3,2,3,4,4,0,1,3,6,0,0,5,12,5,4,1,5,1,4,2,1,2,5,2,7,0,0,1,2,2,0,1,5,5,0,1,0,6,2,3,2,8,8,4,4,3,0,2,3,1,0,0,3,12,7,1,6,1,1,3,0,4,2,0,1,0,2,4,1,6,0,0,16,11,5,5,4,11,7,3,2,4,0,2,11 118 0.125837 1 chr12 123518382 123518494 - RILPL1, chr12 123518212 123518525 h38_mk_AluJ + 33 SRR1077405,SRR1084649,SRR1085495,SRR1318163,SRR1320115,SRR1331579,SRR1337098,SRR1341763,SRR1348360,SRR1356444,SRR1357478,SRR1360128,SRR1381673,SRR1387809,SRR1413562,SRR1416477,SRR1434526,SRR1447693,SRR1453341,SRR1457482,SRR1464373,SRR1476571,SRR1485459,SRR1498550,SRR1500868,SRR601500,SRR604262,SRR604456,SRR607337,SRR613627,SRR657127,SRR814967,SRR818033, 113 10,4,11,8,10,5,2,8,7,12,5,3,6,2,7,2,9,8,3,7,5,7,10,10,7,5,4,10,6,4,3,12,2,4,3,5,8,10,4,11,6,4,5,6,6,5,12,4,11,5,16,3,3,3,3,4,9,15,2,4,2,4,8,9,12,3,0,5,5,9,7,7,7,5,0,6,9,12,3,2,3,8,2,8,15,9,1,5,16,3,4,2,6,5,4,14,9,9,8,10,0,13,2,10,4,1,6,7,4,2,6,4,0,5,6,6,3 69 0,3,5,0,1,0,1,1,1,4,1,3,2,0,0,7,2,0,0,0,5,0,1,0,2,0,3,4,1,4,5,6,2,0,1,0,4,0,1,0,1,4,2,0,2,0,0,0,2,3,1,1,0,0,0,0,0,1,3,6,1,2,0,1,1,1,2,1,7,2,3,0,2,3,0,2,0,0,2,3,0,6,2,6,0,0,0,0,9,3,0,0,0,2,1,0,0,2,2,2,0,1,3,6,0,0,0,0,1,0,1,0,0,3,4,1,0 118 0.076672 1 chr12 123758800 123759198 + ATP6V0A2, chr12 123758514 123758831 h38_mk_AluSz - 1 SRR1314163, 1 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 113 4,0,2,6,6,10,4,11,6,7,4,1,8,6,6,4,7,2,12,5,5,5,13,5,9,7,10,5,9,5,5,2,7,11,2,2,4,8,4,4,3,16,6,3,6,7,7,3,5,5,5,4,3,9,10,3,8,4,5,4,3,4,3,4,5,2,2,4,7,4,4,5,7,0,3,8,6,4,3,2,1,11,4,5,5,10,8,6,3,4,2,5,7,12,7,4,10,15,9,12,1,4,6,0,7,13,4,20,9,50,15,7,0,23,3,12,19 . . . chr1 212854177 212854309 - FLVCR1-AS1, chr1 212854030 212854355 h38_mk_AluSp + 1 SRR1077405, 1 0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 32 1,1,0,6,0,0,2,0,1,0,0,0,0,0,2,0,3,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,2,0,0,1,0,0,1,0,1,2,0,0,2,3,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,3,0,1,0,4,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,1,3,2,0 . . . chr12 132733996 132734071 - ANKLE2, chr12 132734001 132734260 h38_mk_AluSx4 + 1 SRR657754, 14 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0 118 0.002746 1 chr12 132862333 132862425 - CHFR,GOLGA3, chr12 132862302 132862604 h38_mk_AluJo + 9 SRR1341365,SRR1356619,SRR1360128,SRR1453851,SRR1468514,SRR600361,SRR601500,SRR1331579,SRR657754, 99 3,2,1,2,2,0,3,2,4,0,3,3,4,1,4,5,1,2,0,0,1,2,7,1,4,1,6,2,1,0,3,1,2,1,2,1,1,2,0,4,2,3,1,1,2,5,2,1,0,2,2,5,2,2,1,1,5,1,3,1,0,1,1,3,2,0,0,1,0,2,2,0,2,1,2,1,4,1,2,2,2,3,1,2,5,4,3,0,6,1,1,0,6,4,1,1,2,1,2,5,1,1,0,0,0,6,1,2,2,9,5,5,0,7,1,5,1 18 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0 103 0.829802 0 chr1 2206515 2206667 - FAAP20, chr1 2206542 2206858 h38_mk_AluY + 4 SRR1439873,SRR1485459,SRR604262,SRR661973, 55 0,1,2,3,1,0,1,0,0,4,0,1,0,0,0,0,0,1,0,2,0,0,1,1,1,2,1,0,0,0,0,0,0,0,0,3,0,1,0,1,1,0,0,1,1,1,1,0,1,1,0,0,0,0,1,0,2,0,2,0,0,1,1,1,3,0,0,0,1,0,2,1,2,2,0,0,3,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,2,1,0,2,2,1,1,1,1,1,0,0,0,0,0,0,2,10,0,1,3,1,1,0,0 31 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,1,1,0,1,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,1,0,0,1,3,1,0,1,0,0,0,0,1,0,0,0,2,0,1,1,3,0,1,0,0,0,3,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,1,1,0,0,0,2,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 . . . chr1 22074094 22074219 + CDC42, chr1 22074057 22074384 h38_mk_AluSc8 - 49 SRR1084842,SRR1099499,SRR1316940,SRR1317344,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1418837,SRR1432123,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR601500,SRR614802,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR818033, 110 2,1,3,9,0,5,4,2,1,5,8,2,1,2,14,7,12,7,4,2,5,1,27,7,9,4,3,1,4,2,6,1,2,5,3,11,8,5,1,4,7,7,0,8,6,2,5,3,2,2,2,5,0,1,3,2,9,1,3,2,4,4,2,7,8,6,1,1,5,4,6,2,12,3,2,6,10,2,3,4,2,2,0,3,4,4,5,3,6,2,7,2,2,8,2,2,4,1,0,3,0,2,5,0,1,3,3,7,9,20,12,9,1,8,8,8,2 117 7,2,5,20,4,11,13,6,12,11,9,7,3,9,19,14,17,16,4,4,12,7,40,10,15,14,9,4,16,5,9,10,14,8,3,18,15,12,8,8,22,10,7,13,8,12,10,6,4,9,9,10,4,10,6,9,16,4,9,8,10,5,5,20,8,9,3,5,7,9,20,9,18,9,5,11,19,8,2,12,5,12,1,12,14,10,8,3,9,6,8,7,5,18,16,11,18,5,6,6,2,8,10,11,22,13,9,19,20,39,44,19,4,31,19,27,6 118 0.099497 1 chr1 223141648 223141763 - TLR5, chr1 223141481 223141790 h38_mk_AluSx1 + 3 SRR1335446,SRR1342045,SRR599510, 34 0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,3,0,0,2,0,0,1,3,2,0,1,0,0,0,0,0,0,1,0,0,0,0,2,2,0,0,0,0,1,0,0,0,0,1,0,0,0,1,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,1,0,0,1,0,1,1,0,2,0,1,0,0,0,1,0,0,0,0,14,0,0,1,5,0,0,4,1,1 36 1,0,1,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,1,2,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,2,0,0,1,0,0,1,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,2,0,0,1,0,1,1,0,4,0,1,2,0,0,2,0,2,0,1,3,0,0,4,0,0,1,0,0,0,0,3,1,0,0,2,0,0 61 0.814437 0 chr1 223818206 223818337 - TP53BP2, chr1 223818213 223818542 h38_mk_AluSc5 + 15 SRR1337098,SRR1342045,SRR1356444,SRR1367943,SRR1375571,SRR1387264,SRR1416754,SRR1418127,SRR1435020,SRR1439873,SRR1444678,SRR1453851,SRR1487685,SRR604456,SRR818210, 89 0,2,1,1,1,1,0,2,1,3,0,1,2,2,2,3,6,1,1,0,4,1,1,2,2,3,3,1,1,4,1,0,3,1,1,3,2,3,6,1,6,2,1,0,2,0,1,3,10,0,2,2,2,4,4,2,1,0,0,2,3,0,0,2,4,4,2,3,0,0,2,0,1,6,2,2,2,0,2,2,0,3,0,0,1,2,3,0,6,4,2,0,0,2,2,0,4,1,11,2,2,1,3,0,1,0,0,0,1,8,1,2,0,2,4,1,7 71 0,1,0,2,3,0,0,0,1,3,2,4,1,0,0,1,1,0,1,0,4,0,4,0,0,6,1,1,0,5,2,2,0,0,1,1,1,2,2,0,3,0,1,0,0,0,1,1,2,1,0,0,2,4,0,0,3,0,1,2,5,0,1,11,1,0,5,4,2,1,2,0,0,3,4,1,5,0,0,0,0,3,0,3,2,0,3,0,2,2,0,1,0,1,1,0,1,2,4,3,1,3,1,0,0,1,0,0,2,3,0,1,0,2,1,1,0 117 0.250066 0 chr1 223954477 223954667 - GTF2IP20, chr1 223954498 223954705 h38_mk_AluJb + 87 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602314,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 99 0,1,2,2,1,0,5,2,6,12,2,2,3,0,3,2,5,1,1,0,1,2,7,4,0,2,4,3,0,7,2,1,0,1,0,0,0,4,4,5,1,2,0,1,4,3,2,3,4,2,2,2,1,5,5,5,4,4,5,3,2,0,3,3,3,4,0,2,2,1,5,2,3,4,2,1,2,6,1,1,3,7,1,2,2,1,4,4,12,1,7,1,2,0,3,3,1,3,2,4,0,5,5,0,2,6,0,7,3,2,2,2,0,3,5,2,7 117 15,1,16,21,13,16,13,9,16,23,10,15,7,10,22,14,26,8,6,4,10,16,21,11,10,3,18,8,12,9,13,17,4,11,3,7,3,6,8,21,10,18,11,10,18,19,13,11,17,8,13,8,8,12,11,8,14,4,18,10,3,4,16,15,25,11,11,1,14,14,12,6,22,11,4,20,23,18,1,15,11,17,10,15,14,14,21,8,26,9,15,3,17,20,13,14,24,10,14,17,7,14,9,10,29,37,12,20,13,56,33,14,13,32,15,23,12 . . . chr1 224301691 224301771 - NVL, chr1 224301539 224301838 h38_mk_AluJb + 58 SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356444,SRR1357478,SRR1360563,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1440986,SRR1442571,SRR1444622,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR600361,SRR602314,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR658307,SRR661973,SRR814967,SRR818210, 98 7,0,1,4,3,2,8,2,6,5,2,1,3,3,10,4,4,0,2,0,4,0,10,6,3,2,5,1,5,2,8,5,3,7,2,1,0,0,1,8,0,5,2,3,3,1,5,0,2,2,3,7,3,2,6,1,7,1,2,1,0,2,0,2,13,2,3,0,3,5,3,1,2,3,0,3,5,2,0,7,4,3,0,1,5,4,4,2,1,3,2,2,2,4,3,3,8,2,0,3,0,11,2,0,10,10,0,7,6,8,4,2,2,5,0,12,1 88 0,0,3,3,1,0,4,1,1,1,4,0,1,3,3,2,6,0,1,0,1,1,11,1,3,1,4,2,0,1,1,5,0,4,0,0,0,0,0,4,1,2,1,1,0,2,3,1,1,5,4,1,2,1,1,0,2,0,3,3,0,1,1,0,7,1,4,2,4,0,3,0,3,2,1,3,1,1,0,2,0,3,1,1,4,1,0,1,3,0,0,1,3,1,2,1,6,1,3,1,2,3,0,0,4,9,0,1,1,1,4,1,0,4,2,8,1 118 0.355033 1 chr1 225600208 225600362 - ENAH, chr1 225600243 225600402 h38_mk_AluJb + 1 SRR1375571, 104 4,2,1,1,3,4,0,1,1,1,4,1,2,2,2,3,4,3,2,2,3,2,5,2,3,5,3,3,0,0,2,0,3,1,2,5,1,5,0,0,5,0,3,3,2,0,1,3,4,3,4,1,3,1,3,1,2,4,3,1,6,2,2,5,4,7,4,3,4,3,4,0,3,1,4,5,5,1,4,2,2,4,4,3,1,0,4,2,9,3,6,1,3,3,3,1,1,2,8,5,2,2,2,0,1,4,0,7,1,3,1,3,1,1,2,3,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.194183 1 chr1 225786862 225786985 + SRP9, chr1 225786836 225787142 h38_mk_AluJo - 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 93,56,51,102,57,80,80,47,44,98,80,64,70,78,141,55,103,101,56,19,80,80,255,75,109,82,96,47,51,83,128,42,70,79,77,66,91,66,36,70,160,161,66,84,32,156,74,106,70,79,89,78,54,66,112,104,80,29,64,78,214,41,27,104,74,76,91,52,87,57,91,47,55,72,92,86,202,33,115,56,46,112,83,106,112,138,204,31,157,73,76,27,49,103,92,65,87,61,108,119,8,103,80,24,153,173,97,95,64,224,99,118,43,120,105,93,72 117 120,56,77,105,56,95,98,60,53,135,59,65,97,75,151,60,129,114,83,38,63,78,244,46,118,86,95,56,52,74,148,39,77,84,72,76,130,71,43,81,162,135,77,68,53,163,64,122,94,72,72,78,38,79,111,118,100,36,51,102,195,49,51,73,110,56,110,76,92,51,100,55,59,86,113,86,195,46,116,64,53,97,80,107,94,146,194,38,146,73,84,24,63,82,97,73,70,140,101,122,6,117,56,27,145,208,96,103,66,347,98,84,47,115,130,68,96 118 0.316702 1 chr1 226909702 226909794 + COQ8A,PSEN2, chr1 226909507 226909826 h38_mk_AluJ - 31 SRR1084649,SRR1316940,SRR1317344,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1356444,SRR1357478,SRR1399779,SRR1408208,SRR1414897,SRR1416477,SRR1418127,SRR1421177,SRR1432123,SRR1435020,SRR1439873,SRR1440986,SRR1444678,SRR1454803,SRR1474553,SRR604262,SRR661349,SRR818210,SRR1085495,SRR1386708,SRR1455925,SRR602516, 99 1,3,4,5,8,3,1,2,6,6,2,1,3,8,4,2,1,3,0,4,7,4,8,0,5,1,6,3,5,2,1,12,3,1,1,4,2,0,2,8,0,2,1,1,7,6,7,1,0,6,3,3,4,1,0,1,7,1,4,2,0,1,0,6,5,8,1,4,2,0,1,4,3,1,1,4,2,3,0,2,2,4,2,9,2,0,0,0,0,5,8,3,4,2,4,8,6,3,0,2,0,3,2,15,1,8,1,1,5,2,5,0,1,10,3,4,0 62 0,0,1,0,4,0,2,0,1,2,2,0,0,0,3,1,1,1,0,1,1,0,5,0,3,3,1,2,2,3,1,3,0,0,0,2,0,0,0,5,3,0,3,0,5,1,4,0,0,1,0,1,0,4,0,2,2,1,1,3,1,1,0,1,3,3,0,3,0,1,1,3,4,1,1,0,0,0,0,0,4,0,0,1,0,1,0,0,0,0,1,0,0,0,0,4,0,3,0,2,0,0,1,0,3,0,0,0,2,0,3,1,0,1,0,3,0 . . . chr1 226910589 226910757 + COQ8A,PSEN2, chr1 226910611 226910740 h38_mk_AluSx - 14 SRR1317344,SRR1326179,SRR1340508,SRR1357478,SRR1414897,SRR1418127,SRR1432123,SRR1435020,SRR1454803,SRR604262,SRR661349,SRR662233,SRR818210,SRR1085495, 62 0,0,1,0,4,0,2,0,1,2,2,0,0,0,3,1,1,1,0,1,1,0,5,0,3,3,1,2,2,3,1,3,0,0,0,2,0,0,0,5,3,0,3,0,5,1,4,0,0,1,0,1,0,4,0,2,2,1,1,3,1,1,0,1,3,3,0,3,0,1,1,3,4,1,1,0,0,0,0,0,4,0,0,1,0,1,0,0,0,0,1,0,0,0,0,4,0,3,0,2,0,0,1,0,3,0,0,0,2,0,3,1,0,1,0,3,0 63 0,0,2,4,4,2,0,0,1,0,4,2,0,1,2,1,0,1,0,0,2,1,5,1,3,1,5,1,0,1,1,4,0,0,0,1,0,1,0,2,0,3,0,0,3,0,4,0,0,2,0,1,0,5,2,0,4,0,4,2,1,0,3,0,3,1,0,1,0,2,0,7,1,0,0,1,1,1,0,2,0,0,2,1,0,1,0,0,0,0,2,0,0,0,0,0,1,1,0,2,0,2,0,0,0,3,2,0,3,0,4,1,1,0,2,2,0 . . . chr1 226917527 226917660 + COQ8A,PSEN2, chr1 226917489 226917640 h38_mk_AluSq2 - 30 SRR1084649,SRR1084842,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1357478,SRR1386708,SRR1399779,SRR1408208,SRR1414897,SRR1418127,SRR1432123,SRR1434526,SRR1435020,SRR1440986,SRR1454803,SRR1476571,SRR595926,SRR604262,SRR607337,SRR613627,SRR661349,SRR662233,SRR818033,SRR1085495, 60 0,0,2,4,4,1,0,0,1,0,3,1,0,1,2,1,0,1,0,0,2,0,5,1,3,1,5,1,0,1,1,4,0,0,0,1,0,1,0,2,0,3,0,0,3,0,4,0,0,2,0,1,0,5,2,0,4,0,4,2,1,0,3,0,3,1,0,1,0,2,0,7,1,0,0,1,0,1,0,1,0,0,2,1,0,1,0,0,0,0,2,0,0,0,0,0,1,1,0,1,0,2,0,0,0,3,0,0,3,0,4,1,1,0,2,2,0 88 0,2,9,6,5,7,10,1,3,5,6,3,0,7,5,2,3,1,0,0,3,4,13,3,4,0,4,8,1,0,0,13,0,0,1,0,0,3,2,3,0,0,0,3,6,0,7,4,1,2,0,4,5,5,0,0,9,1,3,5,1,6,1,4,7,3,0,7,2,0,0,5,7,0,1,6,3,3,0,1,9,2,4,8,4,0,0,0,2,3,7,0,4,4,6,8,3,3,0,5,0,7,3,14,4,10,1,4,5,1,9,1,2,8,2,1,1 . . . chr1 226917552 226917660 + COQ8A, chr1 226917489 226917640 h38_mk_AluSq2 - 1 SRR1099499, 5 0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 88 0,2,9,6,5,7,10,1,3,5,6,3,0,7,5,2,3,1,0,0,3,4,13,3,4,0,4,8,1,0,0,13,0,0,1,0,0,3,2,3,0,0,0,3,6,0,7,4,1,2,0,4,5,5,0,0,9,1,3,5,1,6,1,4,7,3,0,7,2,0,0,5,7,0,1,6,3,3,0,1,9,2,4,8,4,0,0,0,2,3,7,0,4,4,6,8,3,3,0,5,0,7,3,14,4,10,1,4,5,1,9,1,2,8,2,1,1 . . . chr1 227582514 227582606 + ZNF678, chr1 227582322 227582638 h38_mk_AluJ - 15 SRR1084842,SRR1317344,SRR1326179,SRR1333741,SRR1340508,SRR1341763,SRR1387264,SRR1416477,SRR1421177,SRR1447693,SRR1464373,SRR1471943,SRR1485459,SRR602516,SRR662534, 66 1,1,0,2,3,2,1,0,0,1,3,0,0,0,3,1,1,4,0,0,1,1,3,1,2,1,0,0,1,1,2,0,2,3,0,0,0,0,0,0,3,0,1,0,0,1,1,1,1,0,1,3,1,0,2,1,0,1,0,0,1,1,0,2,0,0,1,1,1,1,2,0,0,1,0,2,1,0,1,1,0,0,0,1,1,2,1,0,1,0,0,0,3,1,2,4,0,1,0,1,0,0,1,0,1,0,0,0,1,1,1,2,0,1,0,0,0 66 0,2,0,3,1,2,0,0,1,0,2,1,0,0,2,2,1,2,0,0,0,6,4,0,3,0,0,1,0,0,1,0,1,0,1,0,0,1,0,1,3,1,1,2,1,2,0,0,0,2,1,3,2,0,1,2,0,0,0,1,2,0,0,2,0,1,1,0,1,0,1,1,0,0,0,5,0,2,0,3,1,0,1,3,3,1,1,0,4,1,2,2,0,0,4,1,0,2,2,2,1,1,0,0,2,0,0,0,0,7,0,3,0,3,1,2,0 102 0.702722 0 chr1 228164654 228164984 - IBA57-AS1, chr1 228164862 228165165 h38_mk_AluJo + 1 SRR1498550, 59 1,0,0,1,2,1,0,0,1,3,2,0,1,1,0,1,0,0,0,1,0,2,1,0,2,1,0,0,1,0,0,0,2,1,0,1,2,0,0,1,1,0,0,1,1,1,1,1,1,1,1,0,0,0,1,0,2,1,0,1,0,2,2,1,3,0,0,0,0,0,2,1,0,0,2,0,1,0,0,0,0,0,0,2,0,0,0,4,1,0,2,0,1,0,0,0,1,0,2,1,1,0,0,4,0,0,1,0,2,0,1,4,0,1,5,1,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 23192485 23192832 - HTR1D, chr1 23192550 23192869 h38_mk_AluSc + 1 SRR1340508, 6 0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 235363014 235363128 + TBCE, chr1 235362956 235363167 h38_mk_AluJ - 2 SRR1337098,SRR662534, 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0 67 0,0,1,3,0,2,2,1,4,0,2,0,1,3,1,0,0,2,0,2,2,3,5,2,0,0,0,4,2,0,5,0,0,1,0,0,3,1,1,0,2,0,0,0,0,2,4,0,0,2,7,1,1,2,3,2,3,0,0,0,4,2,0,2,4,0,0,2,1,0,0,0,3,1,0,4,7,2,0,4,3,3,1,8,2,0,0,0,0,0,0,0,0,2,3,9,0,2,2,3,0,1,0,0,0,1,1,5,3,0,4,2,0,3,11,4,0 . . . chr1 235496186 235496308 - B3GALNT2, chr1 235496020 235496335 h38_mk_AluSp + 21 SRR1315970,SRR1318163,SRR1340508,SRR1341763,SRR1342045,SRR1375571,SRR1387264,SRR1389979,SRR1390601,SRR1439873,SRR1464373,SRR1468955,SRR1474553,SRR1474777,SRR1487194,SRR1498550,SRR602516,SRR602704,SRR657635,SRR814967,SRR818210, 76 0,0,0,2,1,0,0,0,2,0,4,1,1,0,2,0,2,0,0,2,2,0,5,0,2,4,1,3,0,0,2,1,1,1,0,0,0,2,0,3,2,1,2,2,1,1,1,1,2,1,1,1,0,0,1,1,1,0,0,5,5,2,1,3,1,3,2,0,4,0,1,0,1,0,0,4,5,3,0,1,4,5,1,6,5,3,0,1,4,0,1,0,0,6,0,2,5,1,3,0,3,1,0,0,8,2,0,0,1,0,1,1,0,8,5,5,1 52 0,0,0,1,0,0,7,0,3,0,3,5,0,0,0,1,0,1,1,0,0,0,5,0,1,1,1,0,1,0,1,0,2,0,0,0,0,4,0,0,2,2,2,4,0,0,1,0,1,1,0,0,0,0,0,0,1,0,2,0,0,1,1,1,2,0,0,0,1,0,0,1,1,1,2,3,2,1,0,0,3,1,0,0,3,0,2,0,2,1,0,0,0,2,0,2,2,0,1,0,0,0,0,0,3,0,0,0,0,0,2,0,0,6,1,1,0 108 0.483175 0 chr1 235872661 235873025 - LYST, chr1 235872640 235872941 h38_mk_AluSz + 2 SRR1455925,SRR1487362, 43 2,0,0,3,3,0,0,0,0,0,4,0,1,4,0,0,0,0,0,0,0,0,3,0,3,1,0,1,1,0,0,0,0,0,2,0,2,0,0,2,1,0,0,0,0,0,2,0,0,0,0,2,1,2,0,1,0,0,2,4,0,2,0,1,3,0,0,0,0,3,0,0,3,0,0,2,3,0,0,0,0,2,0,0,0,11,4,0,0,0,3,0,4,3,3,0,0,0,2,3,0,0,1,3,0,5,0,0,0,0,0,2,0,1,0,0,0 21 0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,2,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,2,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,4,6,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1 96 0.207288 0 chr1 235872661 235873029 - LYST, chr1 235872640 235872941 h38_mk_AluSz + 1 SRR595926, 43 2,0,0,3,3,0,0,0,0,0,4,0,1,4,0,0,0,0,0,0,0,0,3,0,3,1,0,1,1,0,0,0,0,0,2,0,2,0,0,2,1,0,0,0,0,0,2,0,0,0,0,2,1,2,0,1,0,0,2,4,0,2,0,1,3,0,0,0,0,3,0,0,3,0,0,2,3,0,0,0,0,2,0,0,0,11,4,0,0,0,3,0,4,3,3,0,0,0,2,3,0,0,1,3,0,5,0,0,0,0,0,2,0,1,0,0,0 23 0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,2,1,0,0,1,0,2,0,0,0,0,2,0,0,1,1,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,1,0,0,0,0,2,0 97 0.222937 0 chr1 23628507 23628597 + MDS2, chr1 23628326 23628628 h38_mk_AluY - 1 SRR662233, 10 0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,0,1,0,0,0,0 10 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,1,0,0,0,0,0 . . . chr1 23771702 23771883 - ELOA-AS1, chr1 23771760 23772075 h38_mk_AluJb + 2 SRR1340508,SRR657635, 41 0,0,1,1,1,0,0,0,0,5,0,1,0,0,0,0,0,0,0,0,1,4,4,0,2,0,0,0,0,1,2,2,3,2,0,0,2,2,0,2,0,2,2,1,0,2,0,1,5,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,2,0,0,3,0,0,1,0,0,0,2,0,0,1,0,1,0,0,1,4,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,3,0,0,0,4,0,0,2,0,2,0,0,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 116 0.067883 0 chr12 42402044 42402118 + PPHLN1, chr12 42401841 42402148 h38_mk_AluJb - 1 SRR1432123, 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 23 3,0,1,3,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,3,0,3,0,0,0,0,3,0,0,0,1,0,2,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,8,0,0,0,0,0,0,0,1,0,0,0,0,0 118 0.004411 1 chr1 243059478 243059668 - LINC01347, chr1 243059499 243059705 h38_mk_AluJb + 111 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 28,6,13,33,12,25,40,16,20,9,28,23,5,30,33,21,30,6,29,3,32,15,30,22,18,11,31,10,20,19,32,9,7,31,18,14,4,9,14,29,13,22,8,18,36,25,15,5,23,16,21,19,16,16,28,26,50,8,21,13,7,6,8,14,39,24,5,6,32,30,17,13,36,17,12,20,70,16,4,31,10,21,15,23,22,24,37,5,25,17,19,12,20,27,18,23,30,18,28,33,2,29,20,15,44,63,42,63,26,88,48,46,12,61,45,33,47 116 12,0,5,13,9,15,18,1,5,11,5,15,2,9,17,15,19,4,3,3,7,11,18,10,7,5,15,5,9,9,14,11,6,10,4,4,1,7,5,6,6,25,3,17,8,5,10,4,8,7,10,6,9,11,8,15,15,8,15,11,2,4,4,9,12,6,4,5,10,12,14,2,10,2,7,5,37,7,2,6,9,16,7,10,13,14,12,3,7,7,11,2,11,8,10,5,15,5,10,8,5,12,14,15,11,17,7,5,13,32,37,26,3,20,8,14,11 . . . chr1 243060419 243060537 - LINC01347, chr1 243060286 243060573 h38_mk_AluJ4 + 3 SRR1498550,SRR600361,SRR604456, 116 12,0,5,13,9,15,18,1,5,11,5,15,2,9,17,15,19,4,3,3,7,11,18,10,7,5,15,5,9,9,14,11,6,10,4,4,1,7,5,6,6,25,3,17,8,5,10,4,8,7,10,6,9,11,8,15,15,8,15,11,2,4,4,9,12,6,4,5,10,12,14,2,10,2,7,5,37,7,2,6,9,16,7,10,13,14,12,3,7,7,11,2,11,8,10,5,15,5,10,8,5,12,14,15,11,17,7,5,13,32,37,26,3,20,8,14,11 37 0,0,1,0,0,0,2,1,2,0,1,0,0,0,1,0,0,0,1,0,2,1,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,1,0,0,2,2,1,0,0,0,0,0,1,0,0,0,1,3,0,0,1,0,0,1,0,0,0,0,0,0,0,2,0,0,2,0,3,0,1,0,2,1,1,0,0,0,1,1,0,0,0,0,0,0,0,4,0,2,2,1,0,0,0,1,0 . . . chr1 243067625 243067722 - LINC01347, chr1 243067467 243067771 h38_mk_AluJb + 68 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1348159,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1413562,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1434526,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR814967,SRR818210,SRR821602, 111 7,2,3,14,6,8,8,6,2,7,4,6,2,4,14,10,9,3,5,2,7,4,10,5,3,1,8,6,4,5,11,3,3,7,5,4,2,4,4,7,4,14,2,7,5,2,5,1,10,3,7,0,3,11,5,6,8,1,7,3,2,1,1,4,7,9,4,2,5,8,5,1,8,4,1,11,10,3,0,5,5,8,3,10,9,11,13,0,8,4,4,1,5,10,5,2,8,2,5,3,0,10,3,0,10,12,7,1,14,17,27,5,0,17,3,8,6 116 13,3,13,20,6,12,19,39,5,33,15,10,4,2,29,18,25,11,6,12,10,12,21,10,7,7,32,12,18,18,20,6,7,23,7,7,3,7,12,20,7,22,6,13,25,10,13,8,10,15,20,14,4,12,5,4,19,5,15,10,6,8,2,10,16,10,4,3,16,10,15,14,13,8,1,14,32,9,0,9,20,9,9,46,25,20,22,4,21,9,10,2,8,25,7,6,14,7,13,50,4,17,16,1,15,18,18,18,35,40,67,11,2,35,52,30,9 . . . chr1 243069581 243069704 - LINC01347, chr1 243069414 243069727 h38_mk_AluJ + 111 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 13,3,13,20,6,12,19,39,5,33,15,10,4,2,29,18,25,11,6,12,10,12,21,10,7,7,32,12,18,18,20,6,7,23,7,7,3,7,12,20,7,22,6,13,25,10,13,8,10,15,20,14,4,12,5,4,19,5,15,10,6,8,2,10,16,10,4,3,16,10,15,14,13,8,1,14,32,9,0,9,20,9,9,46,25,20,22,4,21,9,10,2,8,25,7,6,14,7,13,50,4,17,16,1,15,18,18,18,35,40,67,11,2,35,52,30,9 117 13,4,12,20,3,10,17,31,5,23,10,15,4,7,23,20,19,5,13,11,12,6,12,10,4,10,38,16,29,9,17,5,4,14,3,9,3,8,6,19,10,18,9,7,26,14,13,7,11,19,25,11,5,15,14,9,46,9,15,13,3,4,1,8,12,7,6,6,10,11,13,11,15,15,3,15,27,10,1,22,18,14,5,34,28,15,11,9,19,12,13,8,6,32,19,15,11,10,10,48,1,19,7,22,17,26,18,9,25,57,89,19,2,35,53,33,23 . . . chr1 243092041 243092194 - LINC01347, chr1 243091906 243092226 h38_mk_AluYh3 + 19 SRR1326179,SRR1337412,SRR1348159,SRR1356444,SRR1356619,SRR1360563,SRR1387809,SRR1399779,SRR1415234,SRR1418127,SRR1454803,SRR1474553,SRR1485459,SRR1487194,SRR657754,SRR661349,SRR661973,SRR662534,SRR814967, 91 4,0,5,3,0,1,1,2,3,8,2,4,2,0,7,8,1,2,0,5,0,5,3,2,2,0,16,6,4,4,10,0,3,7,3,0,0,1,1,5,1,7,8,3,5,5,4,0,3,0,12,0,3,11,3,1,24,1,1,3,3,1,0,1,4,3,2,0,1,1,5,6,4,5,2,1,3,5,0,1,6,1,1,13,4,3,7,0,4,2,0,0,5,4,3,1,5,0,3,23,0,3,0,0,0,4,4,0,11,13,29,5,0,20,12,20,0 76 1,1,2,1,1,0,1,1,3,0,3,0,2,5,5,2,1,3,0,0,3,2,6,4,1,1,6,1,1,1,1,0,1,2,0,0,0,0,0,0,0,3,0,6,2,1,1,1,2,1,2,0,0,1,1,0,1,1,0,1,1,0,0,2,3,0,1,1,1,2,1,1,1,1,0,0,5,0,1,4,2,4,4,2,1,6,4,0,3,0,0,0,2,3,0,2,5,0,4,0,0,3,0,0,4,6,0,0,2,7,0,6,0,5,0,0,0 . . . chr1 247105993 247106151 + C1orf229, chr1 247105906 247106037 h38_mk_AluJo - 27 SRR1085495,SRR1315970,SRR1320115,SRR1328895,SRR1337098,SRR1348159,SRR1360128,SRR1360563,SRR1367943,SRR1381673,SRR1387264,SRR1390601,SRR1399779,SRR1413562,SRR1414897,SRR1418127,SRR1435293,SRR1439873,SRR1455925,SRR1457482,SRR1457503,SRR1485459,SRR1487685,SRR600361,SRR602704,SRR661349,SRR814967, 109 2,2,4,5,2,5,6,1,6,2,4,1,2,4,7,2,1,4,1,2,1,2,13,4,9,1,8,4,9,2,5,2,4,7,0,7,5,3,3,3,1,4,2,6,5,8,7,2,4,2,1,1,2,4,2,2,1,2,4,3,6,8,1,6,6,1,1,1,5,1,4,4,8,4,4,1,1,3,2,2,4,2,3,3,3,3,2,1,7,2,5,0,5,2,2,4,5,1,3,3,0,3,0,0,6,1,0,0,11,4,3,8,3,5,16,10,0 111 0,3,5,8,1,4,11,2,12,8,4,4,7,4,6,5,3,5,2,0,7,3,13,1,12,2,5,5,10,1,9,5,7,7,5,8,8,4,9,9,5,2,5,8,7,2,9,4,6,7,0,5,6,8,9,4,5,1,5,8,7,3,1,12,8,3,3,4,10,5,7,1,7,9,7,8,12,5,3,4,5,8,4,9,8,5,3,5,7,4,12,0,6,5,2,5,12,4,4,7,0,3,6,0,11,11,3,15,9,11,10,10,6,15,12,7,4 . . . chr12 47209281 47209458 - PCED1B-AS1, chr12 47209264 47209504 h38_mk_AluSx + 2 SRR1342045,SRR604262, 38 0,0,0,0,0,1,1,0,0,0,2,0,0,0,0,0,4,1,1,0,0,0,1,1,0,2,1,0,0,0,0,7,0,0,2,0,16,0,0,2,0,0,0,0,0,2,3,0,0,1,0,0,0,0,0,7,1,0,2,1,0,0,0,1,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,2,1,3,2,3,0,0,0,1,5,8,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,6 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 46 0.396042 0 chr1 247393141 247393233 + NLRP3, chr1 247392937 247393265 h38_mk_AluJ4 - 2 SRR1084842,SRR1399779, 32 0,0,1,1,0,0,0,1,1,1,0,0,0,1,0,1,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,2,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,2,1,1,0,0,0,2,0,0,0,0,1,0,0,0,0,1,0,0,1,1,0,0,1,2,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0 32 0,0,1,1,0,0,0,0,0,1,3,0,0,2,3,0,0,0,0,0,1,1,2,0,0,0,0,1,0,0,0,5,2,1,0,1,3,0,1,0,0,0,2,0,1,0,0,2,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,2,0,0,0,0,0,1,3,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,2,0,0,0,0,0,0,0,7,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0 56 0.702381 0 chr12 49009309 49009389 + DDN-AS1, chr12 49009099 49009416 h38_mk_AluJo - 1 SRR661349, 24 3,0,0,0,0,0,3,0,0,0,1,0,0,0,4,1,0,2,0,0,0,0,0,0,0,0,0,3,2,0,0,0,0,0,0,0,5,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,3,0,2,0,0,4,0,0,0,0,0,0,0,0,3,0,3,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,5,2,2,0,0,3,0,0,0 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,4,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0 101 0.098692 0 chr12 50133933 50134068 - CERS5, chr12 50133782 50134099 h38_mk_AluS + 58 SRR1072367,SRR1084649,SRR1099499,SRR1314163,SRR1316940,SRR1320115,SRR1320963,SRR1331579,SRR1335446,SRR1337098,SRR1337412,SRR1342045,SRR1356444,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1368772,SRR1381673,SRR1413562,SRR1416477,SRR1416754,SRR1418837,SRR1421177,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1457482,SRR1457503,SRR1471817,SRR1471943,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR602314,SRR604262,SRR607337,SRR612563,SRR613627,SRR657635,SRR657777,SRR661973,SRR662534,SRR818033,SRR821602, 110 3,0,9,4,1,2,3,9,0,2,3,1,6,3,2,1,8,3,3,0,6,3,3,1,1,3,4,0,1,8,3,7,2,3,2,1,1,2,3,1,1,1,1,5,0,4,3,2,3,2,0,5,2,3,2,4,1,0,3,3,3,3,6,5,6,1,6,2,4,2,2,10,1,3,3,2,3,2,3,7,1,1,2,4,1,7,7,4,12,2,8,1,5,4,7,1,5,7,2,3,3,6,2,7,2,4,5,7,5,5,1,4,2,4,6,2,3 116 23,4,14,53,22,42,60,30,24,9,28,13,14,12,37,10,10,30,5,4,42,14,38,46,21,6,28,15,41,18,49,33,3,28,7,23,3,22,6,61,8,25,12,37,22,25,59,1,18,23,27,48,17,23,31,20,34,17,28,29,9,10,17,26,45,11,11,13,31,60,27,26,44,33,7,25,19,12,7,40,19,26,4,49,39,37,32,4,11,18,47,7,26,42,53,22,46,16,20,36,4,30,11,0,36,47,18,17,25,68,76,64,8,77,37,64,6 118 0.604110 1 chr12 50144769 50144969 - CERS5, chr12 50144845 50145189 h38_mk_AluSx3 + 27 SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1316940,SRR1320115,SRR1320963,SRR1328895,SRR1331579,SRR1337412,SRR1354446,SRR1389979,SRR1413562,SRR1416477,SRR1421177,SRR1432123,SRR1439873,SRR1455925,SRR1471943,SRR1487362,SRR1498550,SRR595926,SRR613627,SRR814967,SRR818033,SRR821602, 94 1,1,3,4,2,1,6,6,3,2,1,0,1,1,0,2,5,1,3,1,4,2,3,2,3,6,3,0,2,0,1,3,2,0,2,1,3,1,0,2,1,4,2,2,0,1,2,0,1,3,1,2,1,0,0,4,2,4,0,1,1,0,0,8,1,1,1,1,2,2,1,0,3,3,0,3,5,5,1,4,4,5,3,0,3,5,2,2,2,1,2,0,1,0,4,3,2,1,1,0,0,5,0,0,2,3,2,0,3,2,9,3,3,6,2,8,1 71 0,0,1,2,4,3,1,2,1,4,0,3,3,2,0,1,6,0,0,0,1,2,1,1,0,2,1,2,3,1,1,1,0,0,1,2,3,2,0,2,3,0,2,1,1,1,1,1,3,0,0,2,0,0,0,2,2,0,2,0,1,0,0,2,1,0,0,0,0,0,3,1,2,1,0,1,1,0,0,3,1,0,0,3,1,5,2,0,2,3,2,0,0,1,0,1,1,0,0,1,0,3,0,0,0,1,2,0,0,0,1,0,0,2,4,1,1 118 0.147555 1 chr12 53562518 53562607 - ATF7, chr12 53562348 53562658 h38_mk_AluSq2 + 1 SRR1413562, 98 1,1,1,0,4,4,0,0,2,2,3,1,4,1,3,0,3,2,1,1,2,2,5,1,3,4,4,0,1,4,3,3,1,2,0,2,1,1,2,3,2,5,0,2,4,4,2,2,10,0,5,0,4,2,0,1,5,2,2,0,2,1,3,2,1,0,4,2,5,3,0,1,2,4,4,1,5,2,7,4,3,0,4,2,5,5,5,1,11,1,0,0,2,1,4,2,1,1,2,10,1,3,1,0,2,5,1,2,2,7,0,3,4,4,5,0,4 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.145039 1 chr12 54186847 54187011 - SMUG1, chr12 54186890 54187037 h38_mk_AluJ + 1 SRR1399779, 12 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 76 1,0,2,2,3,0,2,5,0,0,2,1,0,1,2,1,1,1,0,0,2,0,3,2,3,0,2,2,1,0,1,2,1,2,0,6,4,1,2,2,0,2,2,1,1,2,4,0,0,0,0,1,2,2,0,1,2,0,2,2,1,0,0,4,0,1,0,1,3,1,0,0,5,1,0,5,0,1,1,5,2,1,0,1,2,3,1,1,0,0,2,0,0,1,2,2,2,0,1,0,0,0,2,0,2,3,0,1,1,0,8,0,2,6,0,3,0 117 0.126056 0 chr12 54186893 54187011 - SMUG1, chr12 54186890 54187037 h38_mk_AluJ + 48 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1337098,SRR1340508,SRR1341763,SRR1348360,SRR1354446,SRR1356619,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1442571,SRR1444678,SRR1447693,SRR1455925,SRR1464373,SRR1471943,SRR1474553,SRR1474777,SRR1487194,SRR1487362,SRR595926,SRR602314,SRR602516,SRR602704,SRR657635,SRR662233,SRR814967,SRR818210, 92 0,0,3,5,2,1,3,1,0,2,7,2,0,0,6,2,0,0,0,1,3,1,8,1,3,1,2,2,3,1,3,2,1,2,0,4,2,1,1,1,0,3,2,3,1,4,7,1,2,2,4,0,1,3,1,2,4,0,7,1,5,2,0,6,2,1,1,3,2,2,4,1,8,2,2,4,7,3,1,2,4,4,2,1,2,4,0,0,0,2,2,0,1,2,2,3,3,4,0,1,0,0,1,0,3,0,3,0,1,6,5,1,0,2,2,3,0 76 1,0,2,2,3,0,2,5,0,0,2,1,0,1,2,1,1,1,0,0,2,0,3,2,3,0,2,2,1,0,1,2,1,2,0,6,4,1,2,2,0,2,2,1,1,2,4,0,0,0,0,1,2,2,0,1,2,0,2,2,1,0,0,4,0,1,0,1,3,1,0,0,5,1,0,5,0,1,1,5,2,1,0,1,2,3,1,1,0,0,2,0,0,1,2,2,2,0,1,0,0,0,2,0,2,3,0,1,1,0,8,0,2,6,0,3,0 118 0.255463 1 chr12 54188511 54188596 - SMUG1, chr12 54188336 54188661 h38_mk_AluS + 32 SRR1084842,SRR1099499,SRR1317344,SRR1320115,SRR1328895,SRR1354446,SRR1356444,SRR1367943,SRR1375571,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1413562,SRR1416477,SRR1432123,SRR1455925,SRR1457482,SRR1468514,SRR1468955,SRR1471943,SRR1476571,SRR595926,SRR600361,SRR601500,SRR602314,SRR658307,SRR661349,SRR661973,SRR662233,SRR818033,SRR818210, 89 0,0,0,3,5,1,3,5,2,1,7,0,1,2,1,2,0,3,2,0,1,0,4,0,4,0,2,0,4,3,2,3,0,7,1,7,3,4,1,1,4,4,3,3,2,2,2,0,5,0,0,4,0,2,1,0,2,1,2,4,2,2,0,1,2,1,0,2,3,1,1,2,10,4,1,4,5,1,1,4,1,2,2,1,3,1,2,0,0,1,10,0,3,5,4,4,7,0,1,2,0,3,0,0,3,2,0,7,3,2,9,0,1,5,4,6,0 101 0,2,1,5,0,3,2,0,3,7,5,1,3,5,6,10,5,8,0,0,3,3,11,1,2,2,5,2,5,2,2,1,0,2,3,7,6,3,1,12,5,8,6,6,1,6,4,2,2,2,3,4,3,3,3,2,4,0,9,5,10,0,0,4,5,2,0,3,3,0,1,1,10,9,2,8,5,3,3,2,2,2,4,3,3,1,1,1,1,1,6,0,1,4,2,7,7,0,3,3,0,3,2,0,2,11,1,8,4,21,10,7,0,8,4,4,1 96 0.947369 0 chr12 54188515 54188596 - SMUG1, chr12 54188336 54188661 h38_mk_AluS + 39 SRR1102055,SRR1315970,SRR1316940,SRR1320963,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1361567,SRR1368772,SRR1386708,SRR1402900,SRR1408208,SRR1408368,SRR1418127,SRR1421177,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1457503,SRR1464373,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR602516,SRR602704,SRR604456,SRR613627,SRR614802,SRR657754,SRR662534,SRR814967, 88 1,1,0,2,1,0,2,2,4,8,2,0,0,2,1,1,4,3,0,0,4,0,5,2,2,0,2,1,3,1,3,0,0,2,2,5,5,1,1,3,2,1,1,1,0,2,6,1,2,1,0,1,2,2,2,5,0,0,4,4,8,1,2,5,3,2,1,0,4,0,3,0,6,2,1,5,4,1,0,2,1,11,2,3,5,2,0,1,0,3,0,0,1,0,2,3,7,0,2,3,0,1,6,0,7,9,0,0,2,1,8,5,0,8,2,3,1 101 0,2,1,5,0,3,2,0,3,7,5,1,3,5,6,10,5,8,0,0,3,3,11,1,2,2,5,2,5,2,2,1,0,2,3,7,6,3,1,12,5,8,6,6,1,6,4,2,2,2,3,4,3,3,3,2,4,0,9,5,10,0,0,4,5,2,0,3,3,0,1,1,10,9,2,8,5,3,3,2,2,2,4,3,3,1,1,1,1,1,6,0,1,4,2,7,7,0,3,3,0,3,2,0,2,11,1,8,4,21,10,7,0,8,4,4,1 111 0.563037 0 chr12 55834543 55834726 + TMEM198B, chr12 55834251 55834573 h38_mk_AluSz - 1 SRR607337, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 71 6,0,1,0,0,3,2,1,1,2,1,1,0,0,1,1,1,0,0,0,0,6,9,7,4,5,1,3,0,10,3,2,3,0,0,1,4,0,1,2,2,2,0,6,2,3,0,2,1,1,0,2,0,3,3,2,0,0,2,6,1,5,0,3,6,0,1,0,5,1,0,0,1,0,3,0,3,0,1,0,1,0,0,1,3,0,3,0,2,1,1,0,0,0,0,1,0,0,0,4,0,2,0,0,3,8,0,0,1,2,2,7,0,0,11,1,2 . . . chr12 55835305 55835615 + TMEM198B, chr12 55835271 55835576 h38_mk_AluJb - 2 SRR1361567,SRR595926, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0 98 1,4,3,3,2,5,0,3,4,4,1,3,10,3,13,1,0,0,11,7,5,15,2,3,9,4,4,9,0,2,8,9,3,7,3,2,4,0,0,18,4,12,4,0,4,17,8,2,4,3,5,6,4,7,3,0,9,8,0,8,2,3,5,0,10,6,11,0,0,3,4,4,2,4,0,1,12,5,2,0,2,0,11,0,4,11,13,11,6,4,6,2,10,1,4,4,3,14,5,14,1,3,0,0,9,10,3,11,4,11,0,2,7,16,6,2,3 110 0.578776 0 chr12 55999333 55999458 + SUOX, chr12 55999146 55999404 h38_mk_AluJ4 - 73 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1331579,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387264,SRR1389979,SRR1390601,SRR1408208,SRR1413562,SRR1416477,SRR1418837,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR658307,SRR661349,SRR662534,SRR814967,SRR818033,SRR818210, 99 3,0,7,3,2,4,3,0,4,2,5,2,2,2,3,4,3,3,2,1,4,3,17,1,0,3,6,7,5,1,3,0,1,0,1,3,2,5,6,0,2,1,1,2,4,3,5,1,5,2,0,1,4,3,3,1,0,4,3,2,4,0,0,3,6,0,5,3,3,2,1,2,4,6,3,6,6,2,1,0,4,3,6,4,5,5,6,0,6,3,3,0,2,3,1,2,5,14,8,6,0,7,0,0,7,3,0,1,3,2,1,5,4,8,8,5,1 103 5,0,7,9,6,1,4,3,3,2,4,0,5,3,6,2,6,0,0,5,4,1,21,2,1,3,7,7,2,2,6,3,1,4,1,4,8,6,2,2,4,0,5,2,0,6,6,3,9,0,3,3,1,3,5,2,4,1,3,5,12,3,0,4,0,3,4,2,3,4,1,5,2,4,11,2,9,5,5,1,6,4,8,10,6,11,6,0,7,1,5,1,1,2,4,8,6,4,8,12,1,4,1,0,8,1,1,1,2,5,0,6,0,3,18,5,0 117 0.466600 0 chr1 25802016 25802117 + SELENON, chr1 25801984 25802299 h38_mk_AluJb - 112 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 10,0,16,14,9,6,6,16,4,10,9,4,11,13,17,10,23,10,2,7,7,11,27,6,7,12,15,2,9,11,11,1,8,11,7,8,7,12,5,9,18,7,7,9,10,1,6,5,6,2,5,4,7,8,3,5,5,3,7,12,8,1,2,11,13,11,6,5,10,3,8,3,5,9,10,15,20,6,7,8,3,11,9,12,8,6,16,6,33,14,13,5,10,14,12,7,16,12,18,19,4,18,9,0,14,17,2,9,2,17,7,15,1,16,10,10,5 115 11,1,19,4,13,7,5,18,9,14,11,12,11,20,22,10,23,11,4,5,10,12,41,7,6,11,13,5,5,8,11,1,11,6,5,10,5,15,7,8,17,9,6,11,6,3,5,9,10,3,5,10,5,7,6,6,12,1,12,6,11,5,1,18,17,8,9,3,5,4,12,3,11,20,11,15,16,6,4,6,4,10,10,20,12,4,14,5,23,16,15,1,9,13,8,12,19,11,19,22,3,27,8,0,14,10,4,5,2,4,22,8,0,16,7,16,7 118 0.408568 1 chr12 64227874 64227985 + AC012158.1, chr12 64227671 64227995 h38_mk_AluJo - 2 SRR1320963,SRR1341763, 91 8,4,3,0,2,2,0,3,1,11,1,3,0,3,3,0,2,5,0,1,3,0,10,7,8,4,5,1,2,3,2,3,1,5,2,3,3,0,2,2,2,4,2,0,4,0,1,5,4,7,6,2,2,8,4,3,4,4,2,4,8,3,0,5,2,5,4,5,5,0,4,0,3,1,2,3,1,0,11,3,1,0,7,4,4,3,1,0,14,7,4,0,0,2,3,3,7,2,0,4,0,5,4,0,0,7,1,0,3,9,0,2,5,0,0,1,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr12 6446961 6447087 - CD27-AS1, chr12 6446801 6447126 h38_mk_AluJb + 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 61,26,47,69,41,77,70,43,78,58,43,38,47,52,82,48,43,35,22,21,32,44,124,50,53,31,61,52,28,44,51,83,14,51,37,51,45,35,24,77,25,77,37,66,53,42,81,23,50,35,105,85,24,36,34,58,57,81,49,101,51,49,63,61,96,45,34,23,76,77,37,49,77,43,22,41,101,51,57,50,37,67,44,49,53,103,37,26,60,40,42,6,45,39,54,50,63,52,40,91,3,68,48,84,50,96,65,34,45,160,91,75,44,82,115,82,22 117 60,53,37,77,31,46,46,36,76,50,30,30,14,48,82,36,43,52,8,9,27,37,156,51,55,45,52,36,33,38,44,71,19,40,17,42,41,37,26,54,27,101,29,71,34,56,95,30,53,49,83,72,17,35,43,53,55,57,41,86,49,15,42,46,55,43,26,22,66,55,47,34,85,41,19,48,112,54,44,46,43,66,31,32,65,102,40,22,44,24,27,5,36,43,27,21,50,40,27,69,11,53,30,70,53,96,47,24,34,101,57,64,50,44,43,70,24 . . . chr12 6448640 6448737 - CD27-AS1, chr12 6448489 6448795 h38_mk_AluSc8 + 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 141,125,93,271,138,141,146,78,225,130,200,108,139,95,223,127,65,186,58,52,163,153,505,126,193,76,162,112,262,107,121,179,76,180,90,148,278,104,70,236,140,182,98,156,121,162,150,141,81,163,209,149,80,72,92,94,231,169,127,236,143,218,95,179,217,80,80,89,159,142,193,161,169,130,83,112,209,124,128,226,146,195,107,166,194,138,90,65,115,70,198,23,124,118,116,173,184,99,116,147,16,122,83,196,199,212,68,126,208,278,312,165,100,265,311,234,77 117 15,25,11,31,15,22,18,8,27,18,23,25,14,17,34,19,11,29,8,4,26,27,71,17,20,10,18,9,29,14,20,30,7,22,5,20,35,6,10,43,14,23,11,21,15,30,27,10,11,19,43,16,7,16,14,16,41,16,23,22,11,33,12,30,33,14,14,7,19,24,24,18,33,18,11,13,27,25,13,31,16,30,12,10,20,16,11,13,10,4,28,1,18,18,8,25,22,8,17,17,2,27,7,18,25,20,13,36,31,44,50,20,9,46,33,26,4 118 0.997999 1 chr12 6448640 6448757 - CD27-AS1, chr12 6448489 6448795 h38_mk_AluSc8 + 9 SRR1389979,SRR1408208,SRR1415234,SRR1435020,SRR1435293,SRR1435775,SRR1453341,SRR1471817,SRR613627, 117 141,125,93,271,138,141,146,78,225,130,200,108,139,95,223,127,65,186,58,52,163,153,505,126,193,76,162,112,262,107,121,179,76,180,90,148,278,104,70,236,140,182,98,156,121,162,150,141,81,163,209,149,80,72,92,94,231,169,127,236,143,218,95,179,217,80,80,89,159,142,193,161,169,130,83,112,209,124,128,226,146,195,107,166,194,138,90,65,115,70,198,23,124,118,116,173,184,99,116,147,16,122,83,196,199,212,68,126,208,278,312,165,100,265,311,234,77 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,4,0,0,0,15,0,0,0,0,0,0,0,0,4,10,10,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0 . . . chr12 6558016 6558137 - NOP2, chr12 6557851 6558175 h38_mk_AluSz + 1 SRR1471943, 103 3,0,3,2,0,0,2,4,5,1,1,4,1,2,2,5,15,5,2,1,2,0,9,3,0,2,6,4,4,4,1,9,6,5,1,4,5,1,1,0,3,7,4,2,7,3,5,2,2,2,6,9,3,2,2,1,7,4,1,4,1,4,3,4,5,1,2,0,3,6,4,8,5,1,1,2,3,4,0,3,3,8,3,4,4,8,2,4,2,3,1,5,1,0,4,1,0,8,1,3,0,1,0,13,0,7,5,9,1,5,3,2,0,9,14,4,2 26 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,1,0,1,1,1,0,0,3,0,1,0,0,1,0,2,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,1,0,0,0,1,0,0,3,1,0,0,0,0,2,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 118 0.072429 1 chr12 70285400 70285586 + CNOT2, chr12 70285190 70285525 h38_mk_AluY - 16 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1337412,SRR1340508,SRR1387264,SRR1390601,SRR1435020,SRR1440986,SRR1468514,SRR1471943,SRR1485459,SRR1498550,SRR613627,SRR818033, 56 1,0,2,1,8,0,4,0,2,0,0,0,0,0,1,2,0,1,0,1,4,1,3,2,0,1,2,1,0,0,0,0,0,0,0,1,1,0,0,0,2,0,1,1,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,3,1,1,0,0,1,0,1,0,0,0,2,1,2,0,0,1,1,1,0,3,2,1,0,3,1,0,0,0,4,1,3,0,0,2,0,1,2,1,1,0,0,3,0,0,1,0,2,0,1,1,2,0,0,0,13,0,0 64 3,0,2,2,3,1,7,2,0,0,2,2,1,0,1,1,1,1,0,1,0,3,7,1,0,0,1,0,2,0,0,0,0,3,1,1,3,0,0,2,1,0,2,3,1,0,3,0,0,0,0,1,1,0,2,0,0,0,1,4,1,1,0,5,2,1,2,0,0,4,1,0,1,0,0,1,1,0,0,1,2,0,0,4,4,0,0,0,7,1,0,0,1,1,0,9,1,0,1,0,0,2,0,0,0,0,2,0,0,1,0,2,0,0,15,4,1 94 0.419175 0 chr12 75400308 75400474 + GLIPR1L2, chr12 75400100 75400431 h38_mk_AluY - 1 SRR1337412, 9 0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 12 0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0 54 0.185648 0 chr1 27895000 27895252 - RPA2, chr1 27895222 27895439 h38_mk_AluSx + 1 SRR1498550, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,2,1,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.002164 1 chr1 28506220 28506327 + SNHG3, chr1 28506178 28506494 h38_mk_AluSx - 26 SRR1099499,SRR1102055,SRR1314163,SRR1318163,SRR1326179,SRR1340508,SRR1341763,SRR1360128,SRR1386708,SRR1390601,SRR1408368,SRR1433796,SRR1435020,SRR1440986,SRR1453851,SRR1454803,SRR1455925,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR1488651,SRR595926,SRR607337,SRR658307, 51 0,0,2,1,0,2,1,1,1,1,0,2,0,0,2,1,1,0,0,0,0,0,4,1,2,0,0,0,1,0,0,0,2,2,0,0,0,2,0,1,2,0,0,4,1,0,0,2,0,0,0,0,1,0,2,0,0,1,0,3,0,0,0,1,1,0,0,0,1,0,1,1,2,0,0,0,2,0,0,1,1,0,0,3,1,4,0,1,1,2,1,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,0,2,0,1,5,0,0,0,0,2,1 69 2,1,0,1,0,2,2,2,1,0,1,1,2,0,3,0,4,2,0,3,1,1,3,0,3,2,0,0,2,1,0,0,4,0,0,2,0,0,0,3,1,2,0,1,0,1,3,2,0,4,0,0,0,0,0,2,3,1,1,2,1,1,1,0,4,0,2,0,0,3,3,3,1,3,0,0,1,0,1,1,0,1,0,1,1,4,2,2,0,0,5,2,0,2,0,2,0,1,0,2,0,2,0,0,1,5,0,1,0,0,0,2,0,2,4,3,0 81 0.810312 0 chr13 110056097 110056228 - AL355974.2, chr13 110056104 110056418 h38_mk_AluJ + 3 SRR1084649,SRR1314163,SRR818033, 7 0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 31 0,0,15,0,0,0,0,9,0,0,2,0,0,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,4,0,0,8,0,0,0,0,0,2,0,0,0,2,2,0,0,0,5,0,10,0,0,0,0,0,0,0,2,0,0,1,0,1,23,0,1,0,2,0,0,0,0,0,3,0,0,0,17,4,0,0,0,0,0,0,0,0,0,2,0,11,0,0,17,0,0,3,0,1,0,0,0,0,0,0,5,8,2,0 43 0.780446 0 chr13 110056110 110056228 - AL355974.2, chr13 110056104 110056418 h38_mk_AluJ + 6 SRR1314163,SRR1387264,SRR1433796,SRR1454803,SRR604456,SRR818033, 28 4,0,0,5,0,0,0,12,0,0,0,0,2,0,0,0,4,0,4,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,18,0,0,1,0,0,7,0,0,0,0,0,0,0,0,4,0,7,0,0,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,2,0,0,0,0,0,0,0,0,0,19,0,0,0,0,0,0,0,0,1,0,3,0,10,0,0,7,1,0,0,0,0,0,0,1,15,3,0,2,9,12,7 31 0,0,15,0,0,0,0,9,0,0,2,0,0,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,4,0,0,8,0,0,0,0,0,2,0,0,0,2,2,0,0,0,5,0,10,0,0,0,0,0,0,0,2,0,0,1,0,1,23,0,1,0,2,0,0,0,0,0,3,0,0,0,17,4,0,0,0,0,0,0,0,0,0,2,0,11,0,0,17,0,0,3,0,1,0,0,0,0,0,0,5,8,2,0 52 0.818888 0 chr1 31698750 31698929 - COL16A1, chr1 31698802 31699114 h38_mk_AluSx1 + 2 SRR1487685,SRR657754, 72 0,0,6,3,0,10,0,2,0,1,0,1,0,0,0,0,1,0,0,2,5,6,2,0,3,0,1,1,0,14,10,2,0,3,1,0,4,0,5,8,3,5,0,2,3,4,6,2,6,0,0,3,0,1,7,2,3,0,0,1,0,1,0,1,0,4,4,3,7,2,6,2,0,4,6,3,3,0,0,0,0,1,0,3,3,1,7,0,11,1,0,0,0,1,2,0,2,2,0,7,0,0,0,0,7,14,5,3,0,8,3,1,3,2,6,0,7 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,4,0,0,0,0,0,0,0,0 116 0.153880 0 chr13 19660152 19660320 + MPHOSPH8, chr13 19659946 19660277 h38_mk_AluYf1 - 8 SRR1072367,SRR1084842,SRR1085495,SRR1415234,SRR1418837,SRR1454803,SRR814967,SRR818033, 84 7,3,1,3,3,3,2,1,0,0,3,0,0,1,1,1,1,0,0,0,0,3,1,0,3,1,2,0,1,3,2,5,0,2,0,1,0,1,1,1,2,1,2,3,2,0,0,0,2,2,3,1,1,0,3,4,3,2,3,1,0,0,0,2,0,1,2,2,0,3,6,2,1,1,1,0,0,0,0,2,1,2,0,1,1,0,0,2,4,2,2,1,1,2,2,5,0,2,1,2,0,5,2,12,8,2,0,7,1,0,8,3,1,8,5,3,2 46 7,0,0,2,4,0,5,4,1,2,1,1,0,0,2,0,2,0,0,0,0,0,2,0,0,0,1,1,2,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,1,2,6,0,0,0,4,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,3,2,2,0,1,0,0,0,2,1,1,1,3,1,3,2,0,5,0,2,0,3,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,8,6,2,0 118 0.056589 1 chr13 19670840 19670914 + MPHOSPH8, chr13 19670811 19671088 h38_mk_AluJb - 1 SRR1360128, 117 39,15,27,27,37,34,48,35,39,31,21,13,15,15,31,22,14,21,13,25,15,7,82,12,14,10,25,58,26,23,26,48,11,40,20,16,26,15,9,30,41,36,21,51,37,26,43,15,18,16,6,32,9,30,8,25,56,13,19,35,15,29,29,37,39,22,13,18,17,26,24,46,19,26,10,19,36,22,21,17,14,46,19,49,29,37,9,10,8,15,24,5,37,31,49,74,28,37,21,41,2,47,14,33,37,17,6,28,29,33,53,19,24,44,50,29,18 13 0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,4,0,0,0,0,0,0,0,0,0,0,0,0 118 0.267295 1 chr13 19670840 19670964 + MPHOSPH8, chr13 19670811 19671088 h38_mk_AluJb - 10 SRR1333741,SRR1336548,SRR1342045,SRR1386708,SRR1408208,SRR1454803,SRR1455925,SRR1468514,SRR604262,SRR662233, 117 39,15,27,27,37,34,48,35,39,31,21,13,15,15,31,22,14,21,13,25,15,7,82,12,14,10,25,58,26,23,26,48,11,40,20,16,26,15,9,30,41,36,21,51,37,26,43,15,18,16,6,32,9,30,8,25,56,13,19,35,15,29,29,37,39,22,13,18,17,26,24,46,19,26,10,19,36,22,21,17,14,46,19,49,29,37,9,10,8,15,24,5,37,31,49,74,28,37,21,41,2,47,14,33,37,17,6,28,29,33,53,19,24,44,50,29,18 28 2,0,0,3,0,1,3,0,0,2,4,0,3,0,0,0,0,3,0,2,0,2,0,0,0,3,0,4,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,6,2,1,0,0,4,0,0,0,0,0,0,5,0,0,0,0,1,0,3,0,0,0,0,0,0,2,2,0,0,0,0,0,0,1,0,0,0,0,4,0,0,0,0,0,0 118 0.270458 1 chr1 32352712 32352802 + TSSK3, chr1 32352524 32352832 h38_mk_AluJb - 1 SRR1072367, 4 2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 37 2,1,0,2,0,2,0,1,0,1,0,0,0,0,5,2,1,0,0,0,3,0,0,0,2,0,0,0,0,2,2,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,1,0,2,3,0,0,0,0,1,0,0,1,0,4,1,0,2,0,0,0,0,0,1,1,0,1,0,0,0,2,1,0,1,1,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0 . . . chr1 32369230 32369338 - BSDC1,FAM229A, chr1 32369317 32369532 h38_mk_AluJ + 43 SRR1072367,SRR1315970,SRR1318163,SRR1320115,SRR1335446,SRR1336548,SRR1337412,SRR1341763,SRR1356619,SRR1381673,SRR1386708,SRR1408368,SRR1413562,SRR1415234,SRR1433796,SRR1435020,SRR1435775,SRR1442571,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1500868,SRR595926,SRR602314,SRR604456,SRR613627,SRR661973,SRR814967,SRR818210,SRR1085495,SRR1099499,SRR1102055,SRR1340508,SRR1387809,SRR1390601,SRR1432123,SRR1439873,SRR1440986,SRR1468514,SRR818033, 94 7,0,4,5,7,4,6,5,5,0,4,4,8,4,6,1,10,5,2,2,6,2,11,5,5,1,4,0,0,0,5,1,0,5,2,5,0,6,4,8,2,6,2,8,4,3,5,6,10,0,9,4,5,2,3,2,7,7,6,6,0,3,0,7,9,4,4,5,7,6,5,1,3,4,3,0,6,0,0,4,8,6,0,4,9,6,2,3,0,2,4,0,1,3,4,2,3,1,3,4,1,2,0,0,0,2,0,0,11,4,3,4,0,10,12,12,0 75 4,1,0,3,8,3,2,0,4,0,2,2,3,1,5,1,0,0,3,4,0,2,10,5,4,3,0,3,1,0,3,2,0,0,0,0,3,0,2,2,3,4,1,10,0,0,4,1,5,0,4,0,0,0,0,0,3,6,1,6,5,5,1,6,5,2,0,3,3,0,4,2,5,2,2,2,4,3,0,1,0,1,0,0,2,1,0,0,4,4,4,0,2,0,8,0,0,0,4,1,0,2,0,0,0,0,0,3,1,10,17,3,0,5,11,5,0 118 0.041358 1 chr13 23909098 23909241 - ANKRD20A19P, chr13 23909093 23909288 h38_mk_AluJb + 1 SRR661973, 34 0,0,0,0,2,5,0,1,1,0,8,0,0,0,0,0,1,0,1,0,0,0,4,0,0,0,1,0,0,0,2,0,0,0,5,0,0,0,1,0,1,0,0,2,0,1,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,0,0,0,1,2,0,0,1,0,0,0,0,0,0,0,1,0,3,3,0,0,1,2,0,0,0,0,0,4,0,3,3,2,0,0,0,6,8,0,0,0,3,2,0,0,0,0,0,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 . . . chr1 32633262 32633354 - ZBTB8OS, chr1 32633231 32633380 h38_mk_AluJ + 89 SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1442571,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 106 0,1,3,8,7,10,6,11,13,6,8,6,5,4,13,4,4,12,3,0,9,0,23,9,2,1,16,10,12,5,8,22,1,16,7,4,11,0,1,17,10,9,6,4,9,7,13,3,4,6,6,11,0,7,12,7,14,3,1,11,13,3,1,10,8,6,2,7,3,3,5,9,10,8,1,12,9,9,4,9,6,10,4,14,1,13,4,3,1,0,3,0,8,2,9,6,2,8,3,18,0,7,1,36,10,12,0,0,3,0,3,11,2,9,18,10,9 99 0,0,4,10,5,4,7,7,9,5,2,7,2,2,4,3,5,6,4,0,2,2,18,5,4,4,8,4,0,3,7,11,0,8,2,6,6,7,1,8,9,10,5,9,6,7,7,7,5,4,3,3,2,5,2,8,8,2,5,10,7,10,5,10,0,5,0,1,3,0,7,4,5,8,4,7,2,0,0,5,5,11,0,10,7,7,1,0,0,1,8,0,6,10,4,7,6,1,7,4,0,5,3,0,14,7,0,0,6,21,18,7,11,7,9,15,6 118 0.423845 1 chr13 30367601 30367717 - LINC00426, chr13 30367432 30367750 h38_mk_AluSx + 2 SRR1340508,SRR1487194, 37 0,0,0,3,0,1,1,0,0,0,2,1,0,0,0,0,0,1,0,0,2,0,3,0,1,1,0,0,2,0,1,0,0,1,0,0,1,1,0,0,0,0,1,1,0,1,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,2,1,1,0,0,1,0,0,0,0,0,0,3,0,0,0,0,0,3,0,0,1,2,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,0,0,0,5,1,1,0 42 0,0,0,1,2,0,1,1,1,0,2,0,1,0,0,0,0,0,1,0,2,0,3,0,0,1,0,0,1,0,0,0,0,0,1,0,1,0,0,0,2,2,1,1,1,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,1,0,0,0,1,0,0,2,0,0,1,1,0,0,0,1,1,1,0,0,3,1,1,0,2,0,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,0,1,4,0 63 0.889683 0 chr13 41227000 41227121 - MTRF1, chr13 41226999 41227308 h38_mk_AluSc8 + 2 SRR607337,SRR818033, 18 0,0,2,0,0,0,1,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,3,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,7,0,0 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 118 0.017289 1 chr13 41227000 41227245 - MTRF1, chr13 41226999 41227308 h38_mk_AluSc8 + 1 SRR602516, 18 0,0,2,0,0,0,1,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,3,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,7,0,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.018286 1 chr13 41227031 41227121 - MTRF1, chr13 41226999 41227308 h38_mk_AluSc8 + 1 SRR1390601, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 118 0.004161 1 chr13 41262048 41262331 - MTRF1, chr13 41262046 41262371 h38_mk_AluSx + 1 SRR1331579, 3 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 88 1,3,0,6,5,2,6,2,1,1,3,0,2,0,4,0,3,2,0,1,3,2,3,3,0,1,4,1,3,1,1,2,1,1,0,1,4,3,0,1,2,2,1,6,3,1,2,0,0,0,2,4,1,1,1,3,2,6,1,0,1,3,0,2,1,0,0,3,0,3,2,1,4,2,1,1,3,1,0,4,2,4,1,7,4,3,1,0,5,0,0,0,0,1,4,9,7,0,2,2,1,7,8,0,2,1,0,0,1,6,7,1,0,0,5,5,0 . . . chr13 41262215 41262331 - MTRF1, chr13 41262046 41262371 h38_mk_AluSx + 61 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1416477,SRR1418837,SRR1421177,SRR1433796,SRR1435775,SRR1453341,SRR1455925,SRR1457482,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR818033,SRR818210, 109 6,1,2,12,7,4,11,1,2,5,7,3,4,3,6,3,5,9,0,1,1,1,11,3,1,2,10,3,7,5,6,1,3,5,0,3,9,6,1,9,8,1,2,9,8,1,3,0,4,6,0,6,3,2,3,9,4,4,2,5,1,9,2,5,3,4,1,0,3,1,4,1,7,6,4,9,8,4,0,6,3,6,1,7,8,8,1,1,5,2,6,1,6,7,6,13,10,5,3,2,1,7,7,0,6,19,4,1,8,11,12,6,0,12,8,7,4 88 1,3,0,6,5,2,6,2,1,1,3,0,2,0,4,0,3,2,0,1,3,2,3,3,0,1,4,1,3,1,1,2,1,1,0,1,4,3,0,1,2,2,1,6,3,1,2,0,0,0,2,4,1,1,1,3,2,6,1,0,1,3,0,2,1,0,0,3,0,3,2,1,4,2,1,1,3,1,0,4,2,4,1,7,4,3,1,0,5,0,0,0,0,1,4,9,7,0,2,2,1,7,8,0,2,1,0,0,1,6,7,1,0,0,5,5,0 106 0.995283 0 chr13 41262215 41262335 - MTRF1, chr13 41262046 41262371 h38_mk_AluSx + 10 SRR1356444,SRR1408208,SRR1432123,SRR1439873,SRR1440986,SRR1444622,SRR1453851,SRR1468514,SRR600361,SRR662534, 109 6,1,2,12,7,4,11,1,2,5,7,3,4,3,6,3,5,9,0,1,1,1,11,3,1,2,10,3,7,5,6,1,3,5,0,3,9,6,1,9,8,1,2,9,8,1,3,0,4,6,0,6,3,2,3,9,4,4,2,5,1,9,2,5,3,4,1,0,3,1,4,1,7,6,4,9,8,4,0,6,3,6,1,7,8,8,1,1,5,2,6,1,6,7,6,13,10,5,3,2,1,7,7,0,6,19,4,1,8,11,12,6,0,12,8,7,4 36 1,0,0,4,0,0,1,0,0,1,0,0,1,0,1,0,1,0,0,0,0,0,2,0,1,0,1,0,0,2,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,2,1,0,1,0,0,1,2,0,1,1,0,0,3,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,1,1,1,1,0,0,1,0,0,1,0,0,0,0,0,0,0,2,1,0,0,1,0,0 107 0.990098 0 chr13 45344305 45344446 + TPT1-AS1, chr13 45344286 45344471 h38_mk_AluSx - 2 SRR1390601,SRR1500868, 7 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 102 2,3,2,5,4,5,1,7,2,6,3,2,0,0,6,1,2,5,4,1,10,3,7,4,2,2,2,4,3,5,1,0,1,3,4,0,2,7,0,2,4,1,4,4,3,5,3,2,5,1,0,5,1,2,1,2,5,0,2,2,1,3,0,1,7,0,2,1,2,2,3,2,3,1,2,5,3,0,0,4,3,1,3,3,3,0,2,3,3,1,5,2,4,8,5,4,4,3,1,2,1,3,3,0,9,2,0,4,4,5,3,3,0,5,3,5,6 . . . chr13 48422650 48422790 - LPAR6, chr13 48422586 48422826 h38_mk_AluJ + 2 SRR1348159,SRR662233, 31 0,0,0,0,0,2,4,0,0,1,3,2,0,0,0,0,0,0,0,0,0,0,0,0,1,4,1,0,1,0,0,0,1,1,0,1,2,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,6,0,0,0,0,0,4,0,0,0,0,1,0,4,2,0,0,3,0,0,0,0,0,1,0,1,0,0,0,0,1,3 19 0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,2,0,0,0,0,0,1,0,2,1,2,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,4,0,0,0,0,0,1 . . . chr13 49580505 49580584 - RCBTB1, chr13 49580293 49580613 h38_mk_AluJb + 111 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 34,31,18,33,23,36,39,15,8,56,21,24,16,12,33,22,34,16,21,16,21,11,75,15,36,21,23,13,15,24,23,9,7,6,6,18,14,17,15,19,41,18,16,33,7,11,17,11,34,15,25,18,12,19,20,6,19,9,16,16,26,13,6,25,22,14,18,18,14,13,25,1,36,16,16,34,39,7,10,23,14,15,10,30,20,13,20,3,24,17,27,6,16,28,24,29,47,7,23,27,1,22,17,0,29,26,13,1,43,46,23,26,7,50,36,38,14 116 16,23,12,27,10,15,25,4,3,25,20,13,13,5,28,22,19,8,13,9,21,7,40,18,20,19,15,9,17,10,15,2,4,7,6,12,8,8,11,17,32,14,4,22,10,11,11,10,17,6,13,10,14,17,9,12,15,7,15,10,17,5,3,19,14,2,5,13,14,15,23,2,24,15,5,36,30,0,7,8,8,7,5,26,21,8,13,2,23,8,15,2,13,11,15,18,30,4,10,19,2,12,18,9,25,25,14,8,18,36,29,17,5,30,22,22,12 118 0.965827 1 chr13 50018823 50018920 + KCNRG, chr13 50018783 50019087 h38_mk_AluSp - 2 SRR1471817,SRR821602, 46 0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,3,0,0,0,0,0,6,0,1,1,3,0,0,1,2,0,0,1,0,5,0,1,1,0,0,0,0,1,0,2,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,1,0,0,1,0,0,0,2,1,0,1,1,1,1,0,0,4,1,0,1,0,3,2,0,0,0,1,1,1,0,1,1,0,6,2,1,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,1,1,2,2 43 0,3,1,1,1,0,2,1,0,0,1,0,1,1,1,0,0,1,1,0,0,0,0,0,0,0,0,0,1,2,0,1,0,0,1,2,0,0,0,1,0,0,0,1,0,0,1,1,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,3,3,0,0,1,1,2,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,3,0,0,2,0,0,2,0,0,2,4,3,8,0,0,0,0,0,2,1,0,2 . . . chr1 35093320 35093441 + ZMYM1, chr1 35093278 35093606 h38_mk_AluSz - 2 SRR1498550,SRR814967, 20 0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0 55 1,0,1,1,0,0,0,0,3,0,3,0,0,1,1,1,2,0,0,0,1,1,2,2,1,4,0,0,0,2,0,0,0,0,3,1,0,1,1,1,0,1,0,0,0,0,1,1,0,1,0,1,1,0,2,1,1,0,1,1,1,0,0,2,0,0,0,0,0,0,2,0,2,2,0,1,1,0,0,2,0,2,0,1,1,0,2,0,1,1,0,0,2,1,0,2,2,0,0,0,0,0,0,0,13,0,0,0,2,0,0,0,0,1,1,2,0 76 0.716103 0 chr13 52169184 52169304 - MRPS31P5, chr13 52169000 52169336 h38_mk_AluJ + 1 SRR1498550, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 92 13,16,4,4,7,11,6,0,3,14,1,8,7,3,5,0,12,5,0,2,9,11,12,6,7,9,5,2,8,3,8,2,1,0,5,0,0,3,4,8,8,21,3,3,8,0,3,0,5,3,10,5,0,0,0,0,14,5,11,6,0,5,4,2,6,0,1,6,8,8,9,2,11,0,0,7,0,2,7,10,1,9,0,7,14,5,8,2,7,1,8,0,15,0,6,1,8,8,4,4,0,5,11,0,15,15,3,0,0,19,9,0,3,14,13,13,17 . . . chr13 52661475 52661570 + SUGT1, chr13 52661297 52661602 h38_mk_AluSz - 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 32,11,25,45,30,15,40,32,30,29,30,12,22,15,36,31,53,38,11,34,29,29,127,25,44,30,25,42,36,25,31,37,10,36,23,31,31,24,11,51,46,28,29,14,17,20,41,22,19,29,22,23,10,22,16,25,29,23,21,39,45,38,23,46,29,17,14,26,24,23,40,49,35,30,18,27,38,25,27,37,31,34,32,61,35,30,15,18,94,14,44,5,26,22,25,60,34,91,39,25,3,42,20,27,69,33,6,48,47,83,41,21,9,74,105,42,34 117 22,23,48,63,58,28,54,52,50,34,37,14,33,15,61,48,103,54,13,65,31,18,145,32,44,48,46,46,48,34,41,64,26,55,16,32,50,45,16,68,53,45,37,24,29,34,52,31,25,35,41,21,16,30,22,40,60,31,30,80,47,46,34,61,54,25,23,39,36,25,61,70,44,34,31,37,38,30,21,49,43,45,39,84,82,40,10,23,125,30,44,14,38,45,41,103,47,100,54,28,8,66,45,21,45,50,28,31,47,68,49,43,6,77,158,60,13 118 0.658825 1 chr1 37456367 37456459 - LINC01137, chr1 37456336 37456655 h38_mk_AluJb + 65 SRR1072367,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1348360,SRR1354446,SRR1356619,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1390601,SRR1402900,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1418127,SRR1418837,SRR1435020,SRR1435775,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1457482,SRR1468514,SRR1468955,SRR1474777,SRR1476571,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR607337,SRR613627,SRR614802,SRR657635,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967, 103 6,4,3,10,2,1,3,4,1,8,3,3,2,5,4,1,0,1,1,0,4,4,10,3,6,2,1,2,3,0,2,5,1,0,4,5,2,3,1,1,6,4,1,2,2,2,0,4,4,4,8,1,1,1,10,3,3,5,2,3,2,7,0,3,2,0,3,6,3,4,5,1,2,7,5,3,4,2,9,3,4,7,2,1,1,9,4,0,6,0,3,0,5,3,2,2,4,0,3,2,0,1,7,11,3,0,3,8,4,4,4,3,1,8,5,4,0 101 1,2,0,5,5,2,1,4,2,7,0,1,2,4,2,1,0,1,0,2,3,4,12,4,0,7,4,2,3,5,2,1,0,2,1,2,4,1,1,4,3,1,2,2,0,1,0,2,2,6,5,2,3,7,5,0,3,1,1,5,1,1,0,2,3,1,1,2,6,4,1,4,6,7,2,0,3,2,0,3,1,5,2,2,2,1,4,1,2,2,4,0,3,2,1,1,1,4,3,3,0,1,5,2,4,0,1,3,3,7,10,4,4,6,1,1,0 112 0.927730 0 chr13 75873852 75873972 + LMO7DN, chr13 75873805 75874139 h38_mk_AluJ - 3 SRR1102055,SRR1454803,SRR602516, 38 0,0,0,4,0,0,2,0,0,0,1,0,0,1,0,0,0,1,1,0,0,0,0,0,0,2,2,0,0,1,0,3,0,1,0,0,1,0,0,2,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,1,0,1,0,0,1,0,0,0,1,0,0,3,1,0,0,0,1,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,0,2,0,0,2,0,0,0,1,0,4,1,0,2,3,3,1 12 0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,4,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 . . . chr1 3866284 3866398 + DFFB, chr1 3866243 3866547 h38_mk_AluSx - 66 SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356619,SRR1357478,SRR1360563,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1476571,SRR1485459,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR614802,SRR657635,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 86 3,2,2,7,3,5,8,0,1,3,3,3,0,1,3,1,4,3,0,0,4,0,16,0,3,3,5,2,1,0,3,4,0,1,1,0,2,0,0,6,2,3,0,4,4,0,5,0,1,4,1,7,1,1,3,3,3,1,4,4,0,0,0,3,4,1,0,1,2,1,1,5,2,2,0,4,7,0,0,4,3,1,1,10,0,1,3,0,6,2,4,0,0,6,3,8,7,3,2,2,0,2,1,0,9,0,0,0,3,2,6,9,3,7,8,2,0 98 3,0,1,7,6,3,6,1,3,1,2,1,4,2,2,2,2,1,1,0,3,0,13,4,2,3,6,6,3,2,4,6,0,1,1,2,2,0,1,1,5,3,2,4,6,3,5,2,2,3,2,5,0,2,2,3,5,3,5,3,1,0,0,7,3,3,0,2,0,2,2,5,4,0,0,5,5,1,0,7,6,0,2,11,3,2,1,0,2,2,5,0,5,5,3,13,12,4,1,3,0,7,1,0,3,1,0,3,3,1,10,5,2,5,3,7,1 112 0.596798 0 chr1 38876319 38876418 + AL139260.1, chr1 38876257 38876587 h38_mk_AluJb - 1 SRR1432123, 12 0,0,2,0,0,0,1,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0 . . . chr13 92705961 92706059 - GPC5-AS1, chr13 92705794 92706095 h38_mk_AluJo + 2 SRR1316940,SRR1342045, 22 0,0,0,0,0,2,0,0,0,3,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,5,1,0,0,0,0,3 18 0,0,0,0,0,1,0,0,0,5,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,1,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,7,0,0,1,0,0,0,1,0,0,0 29 0.959770 0 chr1 40723689 40723792 + NFYC, chr1 40723646 40723985 h38_mk_AluJb - 5 SRR1084649,SRR1333741,SRR1386708,SRR602314,SRR607337, 55 1,0,4,3,0,0,1,1,1,0,0,0,1,3,2,0,0,2,0,0,3,0,2,1,0,1,1,0,1,0,0,3,2,1,0,0,1,2,1,3,0,2,0,2,0,0,2,1,0,0,1,0,0,1,1,0,1,1,0,4,1,0,0,1,1,0,0,0,4,0,0,1,0,1,0,1,3,2,0,0,0,0,0,4,0,0,1,0,1,0,0,0,0,0,3,2,0,0,0,6,0,4,0,0,0,0,0,0,1,1,3,2,0,0,1,1,0 56 1,0,2,0,2,0,3,1,1,1,1,0,1,2,4,0,0,3,0,0,0,1,4,0,2,1,2,0,1,1,0,1,0,0,0,0,0,1,0,2,1,3,1,1,0,0,3,1,0,2,0,0,0,1,0,0,3,1,0,1,0,0,0,0,4,0,0,0,0,0,1,0,1,0,0,1,2,0,1,2,0,0,1,5,1,1,0,0,1,0,2,0,1,0,2,0,0,1,2,3,0,0,0,0,4,0,0,0,2,2,0,2,0,0,0,7,0 . . . chr14 100297024 100297157 - SLC25A29, chr14 100296918 100297127 h38_mk_AluSx + 1 SRR1341365, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 18 0,0,2,0,2,0,1,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,5,2,0,0,0,0,0,0 . . . chr14 21028446 21028534 + AL161668.3, chr14 21028211 21028523 h38_mk_AluJ - 1 SRR1498550, 15 0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,1,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 25 0,0,0,2,2,4,0,0,0,4,0,0,0,0,0,0,0,0,0,1,1,2,0,0,0,3,0,1,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,4,0,0,0,0,2,0,0,0,5,0,0,0,0,0,1,0,0,0,0,0,0,0,0,5,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1 31 0.914516 0 chr14 23564727 23564840 + AL135999.1, chr14 23564703 23564889 h38_mk_AluJb - 37 SRR1072367,SRR1077405,SRR1099499,SRR1314163,SRR1316940,SRR1326179,SRR1336548,SRR1340508,SRR1342045,SRR1348159,SRR1387809,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1432123,SRR1435020,SRR1440986,SRR1447693,SRR1455925,SRR1474777,SRR1487194,SRR1487685,SRR1500868,SRR602314,SRR604456,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR662233,SRR662534,SRR818033,SRR821602, 88 5,6,2,3,1,6,2,5,0,3,2,0,1,2,2,2,1,2,1,4,2,1,4,1,0,4,3,2,2,2,1,1,0,2,1,0,0,0,1,2,1,7,0,0,0,3,2,0,4,2,3,3,0,2,2,0,6,2,1,3,0,0,0,0,4,2,1,1,3,0,4,3,5,1,1,1,5,0,0,3,0,1,0,3,3,2,5,1,0,1,0,1,1,1,1,3,1,1,6,2,0,2,0,0,5,8,4,7,3,0,3,10,0,2,6,1,4 104 4,4,2,1,0,14,3,9,8,4,8,2,4,5,5,2,1,6,4,2,10,4,1,2,4,4,6,2,2,1,1,3,0,2,0,1,3,1,0,4,2,3,1,4,1,3,3,1,1,4,5,8,1,2,3,0,8,1,8,5,0,4,0,1,5,6,2,1,5,3,6,5,2,3,0,1,8,1,0,8,2,4,3,5,3,7,3,3,1,3,4,0,6,7,4,7,5,5,1,9,0,4,7,0,6,8,1,5,7,5,5,8,0,5,5,3,10 . . . chr14 23987156 23987273 + DHRS4L2, chr14 23987122 23987436 h38_mk_AluYm1 - 17 SRR1316940,SRR1318163,SRR1326179,SRR1340508,SRR1341365,SRR1354446,SRR1389979,SRR1440986,SRR1442571,SRR1444622,SRR1454803,SRR1471817,SRR1485459,SRR602516,SRR657635,SRR661973,SRR662534, 57 1,0,0,1,2,0,0,0,1,5,1,2,0,0,1,1,0,1,0,0,0,0,5,1,0,0,3,0,2,0,0,0,1,1,0,1,1,2,1,1,0,1,2,0,1,1,0,0,0,1,0,0,0,1,1,0,0,0,1,0,1,1,0,0,4,1,2,1,0,1,2,1,3,1,3,0,0,1,1,1,0,0,1,2,1,0,0,0,0,1,0,0,0,0,0,5,0,0,0,2,0,0,0,3,8,0,0,0,1,1,4,1,0,1,0,0,0 52 1,0,0,1,1,0,2,0,0,2,2,4,1,0,3,0,0,0,0,2,0,0,2,2,1,0,0,0,3,0,0,2,0,2,0,0,0,0,0,0,1,2,1,1,0,0,1,1,0,1,0,0,2,0,2,1,1,0,1,1,0,0,1,2,4,1,1,0,1,0,0,3,1,0,0,0,0,0,3,0,1,0,0,3,1,0,0,0,0,0,0,0,1,0,0,6,1,0,0,0,0,1,0,0,4,0,0,0,1,1,0,2,0,1,3,0,2 109 0.292460 0 chr1 42480461 42480566 + CCDC30, chr1 42480459 42480594 h38_mk_AluJb - 1 SRR1340508, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,5,0,0,0,0,0,0,3,0,0,0,0,2,0,0,0,0,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0 . . . chr1 42983125 42983311 + SLC2A1-AS1, chr1 42982919 42983241 h38_mk_AluSp - 1 SRR1418127, 74 1,0,0,2,1,1,0,1,3,0,2,2,1,1,3,2,0,1,0,2,0,0,1,4,2,3,2,2,2,5,0,1,0,1,0,0,0,3,1,2,3,1,1,2,0,1,5,0,0,5,1,0,3,2,0,0,0,0,0,2,1,0,0,1,0,2,4,2,3,0,5,1,2,0,2,0,0,1,1,1,1,5,1,1,0,1,1,0,1,1,4,2,0,0,3,0,0,2,2,2,0,3,1,0,1,0,0,0,3,0,3,1,3,0,3,4,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr14 31083526 31083647 + AP4S1, chr14 31083487 31083793 h38_mk_AluJo - 1 SRR814967, 14 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,4,0,0,0 25 0,0,0,2,1,0,0,0,0,0,0,0,0,1,1,0,0,3,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,1,0,0,1,1,1,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,5,1,0,0 99 0.157737 0 chr14 35106367 35106484 + FAM177A1, chr14 35106341 35106667 h38_mk_AluSx - 34 SRR1072367,SRR1316940,SRR1326179,SRR1328895,SRR1337412,SRR1340508,SRR1341365,SRR1356619,SRR1387809,SRR1399779,SRR1408368,SRR1413562,SRR1415234,SRR1416754,SRR1418837,SRR1433796,SRR1440986,SRR1447693,SRR1468955,SRR1471817,SRR1474777,SRR1476571,SRR1487194,SRR1487685,SRR1500868,SRR595926,SRR604262,SRR607337,SRR657754,SRR658307,SRR661973,SRR814967,SRR818033,SRR821602, 92 2,2,1,3,0,3,1,1,0,4,2,0,3,2,4,5,2,0,0,2,0,6,11,2,3,0,1,3,0,2,4,3,4,1,1,3,1,3,0,1,0,1,1,1,1,1,1,3,4,0,5,2,7,0,3,2,2,6,0,0,0,2,1,2,5,1,1,0,4,0,4,2,1,2,2,2,0,3,2,1,3,3,2,3,3,2,1,0,2,3,3,0,0,5,3,1,3,3,2,3,0,1,0,0,2,3,2,6,0,6,7,3,1,4,10,4,4 94 4,1,7,1,1,0,0,1,3,2,2,3,0,1,4,4,2,1,4,1,1,2,2,3,1,0,1,0,1,1,2,0,0,2,1,0,1,1,1,1,0,3,0,0,5,1,0,2,3,1,8,2,4,2,5,2,2,8,1,2,1,2,0,2,4,2,4,0,2,2,2,0,1,0,1,1,1,3,4,2,2,7,7,2,4,1,4,0,1,3,2,0,3,0,0,2,1,1,1,3,0,1,6,0,2,7,2,2,8,2,0,1,5,3,4,1,4 111 0.908175 0 chr14 35274168 35274291 + AL121594.3, chr14 35274133 35274405 h38_mk_AluJ - 1 SRR1487194, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 43700535 43700759 + KDM4A, chr1 43700554 43700731 h38_mk_AluJo - 2 SRR1331579,SRR1399779, 12 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,1,0,0,0,0 6 1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.010227 1 chr14 37219553 37219691 + MIPOL1, chr14 37219347 37219676 h38_mk_AluJo - 7 SRR1340508,SRR1439873,SRR1474553,SRR1498550,SRR602704,SRR661973,SRR662233, 43 0,0,0,1,0,2,1,0,0,0,0,0,0,0,3,0,1,1,0,0,0,0,2,0,0,1,3,0,0,0,1,0,0,1,0,1,3,1,0,0,1,0,0,1,1,0,0,0,1,0,0,3,0,0,0,0,2,0,0,0,1,1,0,4,0,0,1,0,0,1,0,0,0,0,0,1,1,1,0,0,2,0,0,2,2,2,0,0,2,0,2,0,0,1,0,0,1,0,1,0,0,0,1,0,0,1,0,0,0,5,2,0,0,4,0,0,1 57 0,0,0,0,1,1,1,1,0,0,1,1,1,0,0,0,3,1,1,0,0,0,1,0,2,3,1,1,1,1,0,0,0,2,0,2,1,0,0,0,1,1,1,3,0,1,0,0,2,1,0,1,0,1,0,0,2,0,0,0,2,0,0,1,1,0,2,0,0,0,1,0,0,2,0,1,1,0,0,1,2,1,0,0,1,0,1,0,3,0,1,0,0,0,0,3,2,4,1,2,0,0,0,0,0,0,0,1,4,5,5,1,0,1,6,0,0 91 0.397418 0 chr14 49603552 49603618 + LRR1, chr14 49603498 49603623 h38_mk_AluSx - 17 SRR1316940,SRR1318163,SRR1331579,SRR1340508,SRR1341763,SRR1348159,SRR1361567,SRR1402900,SRR1439873,SRR1440986,SRR1464373,SRR1487362,SRR1487685,SRR1498550,SRR601500,SRR602516,SRR662233, 57 1,0,0,0,1,0,1,0,0,1,0,1,0,0,0,0,3,0,0,1,0,2,1,0,1,1,2,0,1,1,1,0,0,0,1,0,0,1,1,2,3,0,0,1,1,1,2,0,1,1,1,0,2,1,0,2,0,0,0,0,0,0,0,2,1,0,2,0,0,0,1,0,0,0,1,2,1,0,0,0,0,1,0,0,1,4,2,1,3,1,0,0,1,2,0,2,2,0,1,4,1,2,0,0,1,0,7,0,1,0,1,0,0,1,0,0,0 69 2,0,0,2,1,1,2,1,0,5,1,2,0,0,3,1,3,1,2,1,1,1,5,0,1,1,3,0,0,2,2,0,1,1,2,1,1,0,0,2,0,1,4,1,0,2,1,1,2,2,1,0,2,2,4,0,0,0,1,0,1,0,0,4,3,0,1,2,0,0,0,0,0,0,0,1,0,1,2,0,0,0,0,0,0,1,4,1,3,0,1,0,3,2,1,2,1,2,1,0,0,1,1,0,1,0,0,0,0,6,3,0,0,2,0,3,0 111 0.550170 0 chr14 51348507 51348560 + LINC00640, chr14 51348472 51348557 h38_mk_AluJo - 1 SRR1487362, 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 20 0,0,2,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,1,0,1,1,0,2,0,0,0,2,0,0,0,2,0,0,0,0,1,3,4,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0 . . . chr14 54527784 54527883 + CGRRF1, chr14 54527743 54528050 h38_mk_AluJb - 1 SRR1471817, 13 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 9 0,0,1,0,3,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0 118 0.007781 1 chr1 45552436 45552563 + AKR1A1, chr1 45552164 45552514 h38_mk_AluJ - 115 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 8,5,3,30,7,12,23,4,19,17,28,14,8,8,35,21,18,15,16,0,22,11,96,20,25,13,24,11,31,14,10,24,6,24,11,30,37,10,5,30,13,17,17,15,22,20,31,6,11,19,8,15,11,10,14,19,30,9,25,21,18,18,14,39,20,11,5,15,11,14,24,14,57,12,6,26,34,23,8,40,24,23,4,12,34,24,10,3,19,2,40,3,20,30,20,34,38,2,20,19,3,10,9,16,26,30,8,13,29,22,61,26,6,45,35,39,11 117 8,4,2,45,8,28,30,18,27,15,26,9,11,13,28,31,28,24,14,7,31,8,91,17,22,13,25,11,34,14,9,33,15,22,9,29,54,19,10,41,21,19,22,21,17,13,27,6,3,18,12,16,17,8,17,17,42,7,15,25,18,16,18,37,26,11,13,13,22,19,26,7,45,7,6,29,21,14,11,44,21,53,9,23,27,26,9,7,14,5,41,6,15,25,13,16,29,4,14,15,3,13,11,15,36,45,13,8,37,25,61,26,18,44,42,47,24 118 0.391353 1 chr14 55601757 55601880 + KTN1, chr14 55601730 55602045 h38_mk_AluSz6 - 49 SRR1072367,SRR1084649,SRR1085495,SRR1099499,SRR1102055,SRR1317344,SRR1320963,SRR1326179,SRR1331579,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1360128,SRR1367943,SRR1375571,SRR1387264,SRR1390601,SRR1414897,SRR1418127,SRR1421177,SRR1433796,SRR1435020,SRR1435293,SRR1439873,SRR1444678,SRR1447693,SRR1453851,SRR1457503,SRR1464373,SRR1471817,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR595926,SRR599510,SRR601500,SRR602314,SRR602516,SRR613627,SRR614802,SRR814967,SRR821602, 108 10,6,5,4,4,5,3,1,0,6,9,1,1,4,11,4,5,2,3,2,5,8,11,1,2,8,10,2,5,4,1,1,2,3,1,7,0,3,1,3,15,3,1,5,4,1,3,6,2,2,5,4,4,5,2,3,5,4,2,4,8,2,0,4,1,2,1,6,5,2,6,0,2,5,7,4,2,0,9,6,2,1,1,6,7,2,3,2,11,1,3,2,1,8,3,4,0,1,2,3,1,5,5,0,1,2,0,0,3,4,1,4,4,5,3,3,10 115 21,16,7,7,9,9,10,6,2,15,3,7,6,5,12,7,11,7,7,10,8,12,22,5,8,13,10,2,6,1,3,2,4,3,2,4,6,8,4,2,14,8,4,3,1,6,4,8,3,7,24,2,2,7,8,7,3,10,4,5,10,4,1,4,4,5,9,10,12,3,6,1,8,5,15,5,8,3,8,11,4,10,1,11,8,3,6,2,25,8,11,4,4,7,8,4,7,5,7,20,0,11,8,0,2,4,1,8,7,13,7,13,8,13,5,14,16 117 0.523600 0 chr14 56619358 56619451 + TMEM260, chr14 56619173 56619472 h38_mk_AluJo - 1 SRR814967, 76 1,0,2,2,0,0,2,0,0,0,1,1,2,1,2,1,3,0,0,0,2,2,9,0,0,0,1,1,1,0,0,0,5,1,1,1,1,2,0,2,3,1,2,1,9,0,1,0,0,0,3,1,1,3,1,1,2,1,0,1,0,1,0,2,2,1,4,1,2,1,0,0,1,2,2,1,0,0,2,0,2,1,1,2,2,3,2,1,0,1,4,0,1,1,4,0,3,2,0,2,0,0,0,0,1,2,0,0,3,8,3,0,0,3,1,0,3 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 113 0.266705 0 chr14 58441221 58441343 + KIAA0586, chr14 58441178 58441510 h38_mk_AluJb - 2 SRR1439873,SRR1455925, 19 0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,0,1,1,0,0,2,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0 24 0,0,0,0,0,0,0,1,0,0,1,1,0,1,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,3,0,0,1,0,0,0,0,0,0,2,0,0,1,0,0,1,1,2,0,0,0,0,0,2,0,1,0,1,0,0,0,0,0 100 0.156378 0 chr14 61078806 61078927 + SLC38A6, chr14 61078792 61079094 h38_mk_AluJb - 3 SRR1314163,SRR1381673,SRR1485459, 4 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 23,17,60,38,29,25,33,30,43,80,25,20,32,23,30,18,26,16,31,34,18,29,69,28,35,17,49,37,28,34,36,92,8,43,36,21,8,6,24,71,26,24,23,39,28,34,44,36,52,40,35,34,34,44,22,19,45,30,23,32,14,13,42,33,53,17,22,15,21,28,21,41,38,18,16,17,45,32,8,27,27,43,41,44,30,23,13,43,29,52,40,12,38,35,29,41,35,59,27,39,9,41,12,46,40,50,40,28,26,31,32,14,35,55,26,35,25 . . . chr14 61078810 61078927 + MNAT1,SLC38A6, chr14 61078792 61079094 h38_mk_AluJb - 68 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1328895,SRR1336548,SRR1337098,SRR1337412,SRR1341365,SRR1341763,SRR1348159,SRR1354446,SRR1356619,SRR1360563,SRR1361567,SRR1386708,SRR1387264,SRR1399779,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1454803,SRR1455925,SRR1457503,SRR1468955,SRR1471817,SRR1471943,SRR1474777,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR1342045 82 2,0,2,3,1,1,4,1,0,2,0,1,2,1,1,1,0,0,0,5,2,2,0,2,1,1,2,0,1,1,1,0,0,2,4,1,0,0,0,2,1,0,1,1,1,0,1,1,3,0,4,2,0,0,3,0,1,0,1,3,1,2,3,2,2,1,1,0,2,0,0,5,2,0,1,0,0,1,3,2,0,3,0,0,2,3,0,2,1,2,4,0,2,1,1,2,1,4,1,3,0,1,1,0,2,2,1,3,1,0,2,2,2,1,1,1,0 117 23,17,60,38,29,25,33,30,43,80,25,20,32,23,30,18,26,16,31,34,18,29,69,28,35,17,49,37,28,34,36,92,8,43,36,21,8,6,24,71,26,24,23,39,28,34,44,36,52,40,35,34,34,44,22,19,45,30,23,32,14,13,42,33,53,17,22,15,21,28,21,41,38,18,16,17,45,32,8,27,27,43,41,44,30,23,13,43,29,52,40,12,38,35,29,41,35,59,27,39,9,41,12,46,40,50,40,28,26,31,32,14,35,55,26,35,25 . . . chr14 61078830 61078927 + MNAT1,SLC38A6, chr14 61078792 61079094 h38_mk_AluJb - 4 SRR1335446,SRR1386708,SRR1435293,SRR661349, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0 117 23,17,60,38,29,25,33,30,43,80,25,20,32,23,30,18,26,16,31,34,18,29,69,28,35,17,49,37,28,34,36,92,8,43,36,21,8,6,24,71,26,24,23,39,28,34,44,36,52,40,35,34,34,44,22,19,45,30,23,32,14,13,42,33,53,17,22,15,21,28,21,41,38,18,16,17,45,32,8,27,27,43,41,44,30,23,13,43,29,52,40,12,38,35,29,41,35,59,27,39,9,41,12,46,40,50,40,28,26,31,32,14,35,55,26,35,25 . . . chr14 61307068 61307235 - AL359220.1, chr14 61307107 61307254 h38_mk_AluJ + 1 SRR1335446, 22 0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,2,1,0,6,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,1,0,0,1,0,0,1,0,2,0,0,0,0,1,0,2,0,0,0,0,0,0,0,1,4 6 0,1,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr1 46571417 46571539 - MKNK1, chr1 46571253 46571579 h38_mk_AluJo + 32 SRR1084842,SRR1102055,SRR1317344,SRR1328895,SRR1333741,SRR1335446,SRR1340508,SRR1341763,SRR1348360,SRR1368772,SRR1390601,SRR1402900,SRR1408208,SRR1421177,SRR1432123,SRR1433796,SRR1435293,SRR1440986,SRR1453341,SRR1455925,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR602704,SRR604456,SRR607337,SRR613627,SRR657754,SRR662534,SRR818033,SRR818210, 82 0,0,1,4,6,1,8,0,0,0,8,2,0,3,0,3,1,2,1,0,0,0,4,0,3,0,2,4,2,2,0,1,0,2,0,1,1,1,1,1,1,1,0,2,1,5,5,3,0,0,2,2,0,0,1,3,4,3,2,0,1,1,1,1,3,3,0,1,2,2,2,3,3,2,0,4,1,0,0,4,0,2,0,1,6,7,2,0,3,1,3,0,2,2,3,2,5,3,4,6,0,2,0,0,1,12,0,0,1,5,8,6,0,1,5,2,4 78 0,0,0,4,2,0,3,1,4,0,3,2,0,2,1,1,1,2,1,0,1,0,5,0,1,0,1,2,2,1,2,0,1,1,0,0,2,1,0,2,2,2,3,2,1,2,2,0,0,4,0,1,2,0,0,2,1,1,2,1,3,0,0,1,2,1,0,0,4,3,0,1,1,0,1,0,2,0,0,2,2,0,1,3,1,2,3,1,4,1,2,0,0,2,1,0,3,2,2,3,0,2,0,0,2,3,0,0,0,1,1,3,0,2,3,2,4 118 0.071395 1 chr14 70810747 70811062 + AC004816.1, chr14 70810734 70810962 h38_mk_AluJb - 3 SRR1455925,SRR814967,SRR818033, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0 45 0,0,0,2,3,0,0,0,0,0,0,0,0,0,3,3,0,3,0,0,2,0,4,0,0,3,3,0,1,0,1,5,2,0,0,2,1,0,0,0,3,1,0,0,3,1,0,0,0,0,0,3,0,0,0,0,1,0,0,2,3,0,0,0,0,0,0,0,0,3,2,2,3,3,0,0,2,1,0,3,0,0,0,0,2,2,0,1,0,0,0,1,1,4,3,3,0,0,0,0,0,0,0,0,0,12,0,3,2,0,0,0,0,4,2,5,0 110 0.120704 0 chr14 73343020 73343202 + PAPLN, chr14 73342841 73343138 h38_mk_AluJo - 1 SRR1356444, 5 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,0 16 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,1,0,0,2,0,1,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 24 0.556250 0 chr14 73924702 73924819 + AC005520.1,PTGR2,ZNF410, chr14 73924655 73924986 h38_mk_AluSc8 - 29 SRR1415234,SRR1437538,SRR1084649,SRR1317344,SRR1387264,SRR1432123,SRR1468514,SRR1474777,SRR1487194,SRR602516,SRR818210,SRR1320963,SRR1326179,SRR1328895,SRR1360128,SRR1368772,SRR1375571,SRR1387809,SRR1399779,SRR1408208,SRR1439873,SRR1444678,SRR1453851,SRR1468955,SRR1471943,SRR1488651,SRR602704,SRR657754,SRR814967, 75 0,0,6,1,0,0,1,5,0,0,2,1,2,4,2,2,1,1,0,0,2,0,4,1,2,0,1,0,1,0,2,2,2,0,1,2,1,2,0,0,3,1,1,1,3,1,1,1,0,0,3,0,3,0,0,1,4,1,1,0,2,0,2,3,1,0,1,1,2,0,2,1,2,1,0,1,2,2,0,1,2,2,2,3,2,0,2,1,2,0,1,0,1,0,0,1,4,0,0,1,0,0,0,0,0,3,0,0,1,2,3,3,0,2,1,3,0 75 1,0,3,1,0,0,0,1,2,0,1,0,2,1,3,1,0,0,1,0,0,0,4,0,1,0,0,0,1,3,5,6,4,1,1,0,2,2,1,2,1,2,2,0,1,0,2,1,0,0,1,3,0,3,0,1,2,1,2,0,1,0,5,2,2,1,0,3,1,1,3,3,1,1,0,0,2,1,0,3,0,2,3,1,3,4,3,3,4,0,2,0,4,0,0,2,2,1,0,1,0,0,0,0,4,2,1,0,3,0,2,0,0,3,1,2,1 118 0.042962 1 chr14 73927107 73927228 + ZNF410, chr14 73927080 73927388 h38_mk_AluSx - 2 SRR1408368,SRR1487362, 24 0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,2,1,1,0,0,0,0,0,1,0,0,3,0,0,0,0,0,1,1,2,0,1,0,0,0,0,0,0,0,0,2,0,1,0,1,0,0,7,0,1,0,0,0,0,0,0,0,0,0,0 75 2,2,1,1,0,1,2,1,2,4,0,1,0,2,1,1,4,0,0,4,0,1,1,0,0,0,2,0,1,0,5,1,1,2,0,1,1,0,0,0,4,2,1,0,2,0,0,4,2,1,1,3,1,1,0,4,1,4,1,0,2,1,0,1,2,1,0,1,4,0,1,5,4,0,0,3,1,1,3,0,3,0,1,1,1,6,2,3,5,0,0,2,0,0,1,1,0,0,1,2,1,0,1,0,4,0,3,0,0,3,0,0,0,3,2,4,0 118 0.031588 1 chr14 73996650 73996776 - ENTPD5,FAM161B, chr14 73996652 73996961 h38_mk_AluJb + 6 SRR1314163,SRR1335446,SRR1337098,SRR1402900,SRR662534,SRR1316940, 37 0,2,0,1,0,1,2,2,0,1,0,0,0,1,0,0,3,1,2,0,1,0,3,3,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,1,1,1,1,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,2,2,0,0,1,0,0,0,0,0,0,0,1,2,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,2,1,1,0 26 0,1,0,0,1,0,0,1,1,1,0,0,1,0,0,0,1,0,1,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,3,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,0 104 0.196697 0 chr14 76810089 76810254 - VASH1-AS1, chr14 76810136 76810456 h38_mk_AluJ + 2 SRR1084842,SRR818210, 43 0,0,0,13,3,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,1,0,8,1,0,3,3,0,4,0,0,0,3,2,0,1,0,2,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,1,5,0,2,0,0,0,0,0,0,2,1,1,0,0,2,4,2,0,5,0,2,3,5,0,0,0,1,0,1,0,0,2,0,0,0,0,0,1,0,3,0,0,3,0,0,0,0,0,0,0,0,0,0,0,3,4,12,4,0,7,0,5,2 6 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0 115 0.055810 0 chr14 88547529 88547651 - PTPN21, chr14 88547357 88547676 h38_mk_AluJ + 1 SRR604456, 9 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 108 0.021856 0 chr14 92741062 92741179 - LGMN, chr14 92740895 92741216 h38_mk_AluSz + 30 SRR1085495,SRR1102055,SRR1314163,SRR1326179,SRR1331579,SRR1337098,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1367943,SRR1368772,SRR1387264,SRR1390601,SRR1399779,SRR1408208,SRR1421177,SRR1433796,SRR1464373,SRR1468514,SRR1485459,SRR1487362,SRR1498550,SRR595926,SRR600361,SRR657754,SRR661349,SRR661973,SRR662233,SRR818033, 115 7,1,6,12,14,6,14,8,5,10,5,2,7,8,5,3,17,6,8,3,7,5,8,3,13,12,21,2,17,5,10,5,5,4,5,9,10,3,5,8,8,3,2,8,13,12,14,5,4,4,4,4,2,5,10,5,16,6,5,3,1,2,3,5,9,2,2,1,8,4,5,10,6,8,5,8,12,3,2,6,5,8,5,13,7,18,5,2,4,7,12,0,12,10,8,14,11,14,7,9,5,13,9,12,13,9,1,7,10,23,22,5,0,7,9,5,8 60 1,0,1,1,3,0,8,4,1,0,1,0,0,1,3,3,11,0,0,0,2,0,4,0,2,6,4,0,2,0,1,0,0,0,0,2,3,0,0,2,2,0,1,3,2,1,3,0,0,0,0,1,0,0,1,2,0,4,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,3,3,0,0,1,0,1,0,2,1,8,1,0,2,1,3,1,2,0,0,0,0,0,0,0,0,1,0,0,2,2,1,2,2,5,3,1,0,2,2,0,3 118 0.230925 1 chr14 95158876 95159035 + DICER1-AS1, chr14 95158682 95159000 h38_mk_AluSc - 112 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657777,SRR658307,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 18,4,1,2,1,3,7,1,3,18,3,3,3,6,5,10,2,6,5,5,6,12,7,11,6,7,7,1,5,4,2,4,4,8,2,2,8,4,2,9,11,21,6,5,10,2,5,6,4,2,21,5,4,2,4,10,7,14,6,10,13,9,8,8,7,8,2,4,17,11,12,9,9,4,7,3,10,2,10,3,4,10,7,4,14,10,5,6,18,3,3,2,4,6,6,2,3,3,5,8,1,3,5,11,11,10,5,8,3,2,9,8,10,11,14,2,2 117 62,23,37,40,28,54,51,19,63,67,26,32,38,54,76,42,16,36,22,20,18,57,82,47,37,25,49,36,27,77,51,68,21,46,26,15,37,21,29,67,46,54,16,47,32,51,32,42,52,31,91,33,24,35,43,48,48,96,32,53,48,28,51,38,60,25,36,20,62,59,41,77,32,31,44,28,56,53,21,31,28,46,36,32,52,53,34,52,57,29,33,8,36,20,26,37,20,21,14,37,3,35,15,69,51,105,22,50,25,47,39,29,24,45,74,36,18 118 0.994111 1 chr14 95158876 95159046 + DICER1-AS1, chr14 95158682 95159000 h38_mk_AluSc - 20 SRR1077405,SRR1085495,SRR1320115,SRR1328895,SRR1389979,SRR1390601,SRR1402900,SRR1408368,SRR1414897,SRR1434526,SRR1435020,SRR1444622,SRR1464373,SRR1487362,SRR1488651,SRR1498550,SRR602314,SRR602704,SRR657754,SRR662534, 117 18,4,1,2,1,3,7,1,3,18,3,3,3,6,5,10,2,6,5,5,6,12,7,11,6,7,7,1,5,4,2,4,4,8,2,2,8,4,2,9,11,21,6,5,10,2,5,6,4,2,21,5,4,2,4,10,7,14,6,10,13,9,8,8,7,8,2,4,17,11,12,9,9,4,7,3,10,2,10,3,4,10,7,4,14,10,5,6,18,3,3,2,4,6,6,2,3,3,5,8,1,3,5,11,11,10,5,8,3,2,9,8,10,11,14,2,2 31 0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,4,0,0,0,0,1,0,1,0,0,0,1,0,0,1,0,0,1,0,4,1,2,0,7,0,2,0,1,0,0,0,0,0,0,0,0,2,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,1,0,2,3,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,4,0,0,0,1,0,2,0,0,1,3,0 118 0.964040 1 chr14 96262652 96262770 + AL355102.2,BDKRB1, chr14 96262598 96262937 h38_mk_AluJb - 4 SRR595926,SRR1340508,SRR1487362,SRR662233, 28 0,0,0,0,0,0,1,1,0,0,1,0,0,0,1,0,0,1,0,0,0,0,3,0,0,0,0,2,0,0,0,4,1,0,0,0,0,0,0,0,0,0,0,0,3,0,0,1,0,2,0,0,0,2,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,2,0,0,0,2,0,2,0,0,0,0,0,4,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,1,0,4,0,0,0,0,0,0 47 2,1,0,1,2,1,0,1,1,0,0,0,0,2,1,0,0,1,1,0,0,1,2,0,0,0,0,2,0,1,0,0,2,0,0,0,3,0,0,0,0,0,1,2,1,0,1,1,0,0,0,0,1,0,0,1,1,0,2,1,1,0,0,0,0,0,0,0,2,1,0,2,0,1,0,0,0,1,0,1,0,0,0,0,1,1,0,0,0,0,2,0,1,1,1,1,0,0,0,0,0,0,1,0,0,2,0,0,0,2,5,1,0,1,0,0,0 . . . chr15 101151720 101151846 - CHSY1, chr15 101151742 101152062 h38_mk_AluJo + 1 SRR1333741, 55 0,0,2,3,0,0,2,0,0,1,2,0,0,1,0,0,1,4,0,0,2,0,3,1,0,4,0,1,1,0,3,1,0,2,1,1,2,0,0,3,5,0,2,1,0,0,1,0,0,0,0,0,3,1,0,2,4,0,0,3,2,1,0,2,0,0,0,1,0,3,0,0,5,0,0,1,1,0,0,1,1,3,0,4,1,0,1,0,0,0,0,0,2,3,0,3,0,0,2,2,0,0,2,0,4,0,0,0,0,2,0,6,0,0,1,4,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 85 0.110228 0 chr15 22846949 22847046 + NIPA2, chr15 22846881 22847215 h38_mk_AluSp - 31 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1320963,SRR1328895,SRR1331579,SRR1333741,SRR1340508,SRR1354446,SRR1357478,SRR1360563,SRR1375571,SRR1390601,SRR1408208,SRR1416477,SRR1416754,SRR1418837,SRR1435775,SRR1453851,SRR1455925,SRR1464373,SRR1474553,SRR1487194,SRR602704,SRR604262,SRR657635,SRR658307,SRR814967, 67 0,0,0,7,1,1,3,0,1,0,4,1,0,2,0,6,2,3,0,1,1,0,9,3,2,0,1,0,4,0,0,1,0,5,1,2,3,1,0,0,0,2,1,2,0,0,8,0,0,1,0,2,2,1,1,0,0,0,0,1,1,2,0,2,0,0,0,1,2,0,2,1,4,1,0,3,5,0,0,0,1,3,1,0,4,2,1,0,0,0,0,1,2,3,2,2,2,3,1,0,0,0,1,0,4,0,0,6,0,0,4,2,0,4,5,2,0 76 0,1,1,3,3,1,5,0,2,1,1,0,1,2,1,3,2,3,1,0,5,2,6,1,2,1,0,0,3,1,0,2,0,2,5,1,1,3,0,2,0,2,0,1,3,0,4,0,2,1,0,2,2,0,2,0,5,1,1,2,3,2,0,1,3,0,0,1,1,0,2,0,3,0,0,2,2,1,0,1,2,0,1,0,2,0,5,0,3,2,4,0,1,0,2,0,3,2,0,2,0,2,0,0,2,0,0,8,5,0,1,1,0,6,0,1,0 116 0.154566 0 chr15 24473053 24473193 + PWRN1, chr15 24473022 24473164 h38_mk_AluSq2 - 1 SRR1072367, 3 3,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 34 3,0,0,1,0,0,1,1,0,2,0,0,1,0,0,1,1,0,1,0,2,2,1,0,0,0,0,0,2,0,2,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,3,0,1,1,7,0,0,0,2,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,2,3,0,0,0,0,2,0,0,0,1,0,1,0,2,0,0,0,0,2,1 . . . chr15 24513623 24513737 + PWRN1, chr15 24513599 24513905 h38_mk_AluJo - 1 SRR1102055, 11 0,0,0,3,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1 19 4,0,0,0,0,0,1,0,0,0,0,0,2,2,0,0,0,0,0,1,3,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,4,2,0,0,0,0,0 . . . chr15 25042798 25042910 + SNHG14, chr15 25042762 25043081 h38_mk_AluJ4 - 1 SRR607337, 31 0,0,0,0,1,2,3,0,0,0,1,0,0,1,0,0,0,2,0,0,0,0,3,0,0,0,1,0,1,2,0,3,0,0,0,1,0,3,0,0,3,0,0,0,3,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,1,0,2,0,1,1,0,3,0,0,0,1,2,0,0,0,0,1,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr15 26049125 26049242 + LINC02346, chr15 26049070 26049416 h38_mk_AluSx3 - 1 SRR661973, 5 0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,1,0,0,0 29 0,0,0,2,0,2,1,0,0,0,0,0,0,0,2,1,0,1,0,0,0,0,4,0,0,1,1,1,1,0,0,0,0,1,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,3,0,0,0,1,0,0,1,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,2,0,0,0,0,1,1,1 . . . chr15 28618219 28618378 + HERC2P9, chr15 28618025 28618344 h38_mk_AluY - 42 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1320115,SRR1331579,SRR1335446,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1360563,SRR1387264,SRR1387809,SRR1402900,SRR1408208,SRR1416477,SRR1432123,SRR1440986,SRR1447693,SRR1464373,SRR1468514,SRR1487194,SRR599510,SRR601500,SRR602516,SRR602704,SRR604456,SRR613627,SRR657635,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 111 13,5,15,17,9,4,9,3,3,4,19,1,3,3,6,1,8,1,3,5,8,5,9,5,12,3,8,6,7,3,6,1,7,2,3,4,2,2,0,3,9,12,1,7,5,4,6,3,3,0,5,12,3,7,7,5,6,0,6,3,3,1,1,5,12,12,2,3,6,3,3,2,7,8,3,9,10,3,2,8,7,7,2,12,11,0,4,3,9,1,10,5,2,17,9,26,16,3,10,9,1,7,8,14,1,10,0,2,9,17,34,14,0,27,17,4,5 102 6,12,4,8,5,10,10,3,1,11,5,1,7,0,3,3,2,0,5,1,4,2,6,3,5,3,5,8,0,4,2,1,2,3,4,5,0,4,3,2,11,6,2,2,3,4,11,0,2,2,1,8,6,4,1,0,6,6,0,1,2,3,0,3,14,3,1,2,11,2,6,0,6,3,2,6,9,1,3,1,5,0,1,6,7,1,5,1,5,0,0,2,5,5,3,14,9,4,7,2,0,6,2,0,9,11,1,6,7,16,5,11,0,15,15,7,8 114 0.744353 0 chr15 34391123 34391426 - GOLGA8A, chr15 34391136 34391467 h38_mk_AluSx1 + 111 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 34,1,43,196,50,134,162,34,60,29,133,42,29,40,96,68,42,69,41,5,125,28,71,70,70,22,127,30,123,32,100,52,14,30,47,39,14,44,18,84,37,88,59,100,73,57,105,21,44,65,40,104,16,48,73,82,129,6,68,49,12,18,19,48,112,36,23,27,68,87,48,14,148,38,7,100,171,48,8,115,73,77,16,64,64,62,54,12,17,24,87,18,52,93,81,48,160,17,8,78,12,72,63,1,95,193,43,77,84,299,245,181,9,216,78,210,76 117 41,10,45,285,74,194,206,36,69,56,163,60,38,52,135,71,52,87,49,5,168,42,112,79,86,31,130,66,120,41,111,82,22,27,44,47,6,96,17,131,52,114,68,146,87,92,110,28,54,72,51,114,44,74,85,106,177,14,108,65,13,19,40,73,131,53,23,25,87,87,54,17,190,33,20,131,231,67,4,150,78,116,19,117,69,95,60,21,17,34,120,34,54,140,100,66,178,22,15,126,14,57,80,24,153,392,50,131,147,493,308,262,11,286,110,297,98 . . . chr15 34537344 34537647 - GOLGA8A,GOLGA8B, chr15 34537357 34537688 h38_mk_AluSx1 + 110 SRR1084842,SRR1386708,SRR1433796,SRR1072367,SRR1084649,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 34,1,43,197,50,134,163,34,60,30,133,42,29,40,97,68,42,69,41,5,125,28,71,70,70,22,127,30,123,32,100,53,15,30,47,39,14,44,18,83,37,88,59,100,73,57,106,21,44,65,40,104,16,48,73,82,129,6,68,49,12,18,20,48,113,36,23,27,68,87,48,14,148,38,7,101,171,48,8,115,73,77,16,64,64,62,55,12,17,24,87,18,52,93,81,48,160,17,8,78,12,72,63,1,95,193,43,77,84,301,245,181,9,216,78,210,76 117 46,10,50,311,69,188,207,41,74,49,168,63,35,60,139,73,51,98,48,5,164,40,108,89,89,36,139,66,139,45,115,73,22,24,48,57,9,98,18,121,51,117,69,149,84,101,117,37,52,74,59,111,43,73,81,105,164,14,105,59,13,19,38,74,125,50,21,26,91,81,53,18,199,31,20,133,210,71,4,150,76,110,16,131,70,97,67,21,19,33,122,34,52,155,102,57,189,22,17,126,15,65,80,22,153,422,52,131,136,513,303,270,13,301,104,284,97 . . . chr15 43536135 43536254 - PPIP5K1, chr15 43536127 43536450 h38_mk_AluSx1 + 2 SRR1315970,SRR662233, 48 0,0,3,0,2,0,1,0,2,0,0,0,1,0,1,1,1,1,0,0,0,1,2,2,1,0,1,1,0,0,1,1,0,3,1,1,0,1,0,0,1,2,0,1,0,0,2,0,1,0,0,0,1,1,0,1,2,0,0,0,0,0,0,0,1,1,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,1,1,0,6,4,0,0,1,0,1,1,0,0,0,0,0,0,0,3,1,0,1,3,0,0 23 0,0,2,0,1,0,0,0,3,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,1,0,0,2,0,0,0,1,0,0,0,1,0,0,0,0,0,4,0,0,0,0,0,2,0,0,3,1,1,0 117 0.020629 0 chr15 43536135 43536411 - PPIP5K1, chr15 43536127 43536450 h38_mk_AluSx1 + 1 SRR613627, 48 0,0,3,0,2,0,1,0,2,0,0,0,1,0,1,1,1,1,0,0,0,1,2,2,1,0,1,1,0,0,1,1,0,3,1,1,0,1,0,0,1,2,0,1,0,0,2,0,1,0,0,0,1,1,0,1,2,0,0,0,0,0,0,0,1,1,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,1,1,0,6,4,0,0,1,0,1,1,0,0,0,0,0,0,0,3,1,0,1,3,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.014556 0 chr15 43785410 43785534 + SERF2, chr15 43785369 43785592 h38_mk_AluJ - 6 SRR1340508,SRR1457503,SRR1471817,SRR1488651,SRR1498550,SRR1500868, 70 0,0,1,2,3,2,1,1,0,2,1,1,2,1,0,0,2,2,2,0,0,0,5,0,0,0,0,2,1,1,1,1,2,0,0,0,0,3,2,1,3,2,0,3,1,1,1,1,3,0,1,0,0,0,1,0,0,0,0,0,2,0,0,1,4,1,4,0,1,0,1,2,0,1,3,1,2,0,5,0,0,1,1,2,2,2,0,2,2,3,0,3,2,0,1,0,2,2,0,1,0,0,0,0,1,1,0,1,1,0,0,2,0,2,2,1,1 52 0,0,0,0,2,2,0,0,0,1,1,0,1,0,0,1,0,1,0,0,1,1,3,0,1,0,2,1,0,2,2,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,1,1,0,0,0,2,0,0,0,1,2,0,1,1,0,0,1,0,1,1,0,2,2,1,1,2,5,0,0,2,1,1,4,1,1,1,1,3,0,0,0,0,1,1,0,1,1,0,0,0,0,0,0,0,1,1,2,0,0,0,0,0,0,0,0 . . . chr1 54659115 54659189 + MROH7,MROH7-TTC4, chr1 54659072 54659456 h38_mk_AluSp - 28 SRR1326179,SRR1328895,SRR1356444,SRR1356619,SRR1357478,SRR1381673,SRR1387264,SRR1387809,SRR1389979,SRR1408208,SRR1413562,SRR1414897,SRR1418127,SRR1434526,SRR1439873,SRR1442571,SRR1453341,SRR1457482,SRR1487194,SRR1487685,SRR1500868,SRR601500,SRR602314,SRR657635,SRR657754,SRR1335446,SRR1418837,SRR1488651, 111 7,1,5,7,3,8,2,3,3,8,5,8,4,14,10,5,3,11,3,3,3,17,6,2,3,1,11,11,2,8,11,2,1,7,6,1,3,3,7,16,7,21,4,6,6,12,14,8,11,8,5,7,4,12,8,2,12,1,5,15,3,2,0,11,8,15,4,5,12,12,4,4,6,3,6,6,9,7,1,5,4,9,8,9,7,7,18,5,15,10,4,0,9,6,11,3,11,7,7,10,2,8,9,0,10,5,0,4,6,10,3,4,4,7,8,0,0 73 0,1,0,0,1,1,0,0,0,1,1,0,0,2,4,3,0,0,1,0,1,1,3,0,1,1,0,1,0,2,4,2,0,0,1,1,0,0,3,1,3,2,3,1,2,1,3,3,2,4,1,0,0,1,2,0,1,1,3,1,0,0,3,5,2,5,0,0,1,3,1,0,1,3,0,1,2,0,0,2,0,1,1,0,2,1,1,1,2,2,0,1,1,1,2,0,0,1,0,0,2,1,0,0,2,3,1,1,0,4,0,0,0,1,0,1,0 117 0.445476 0 chr15 49318889 49319116 + GALK2, chr15 49318932 49319263 h38_mk_AluSx1 - 3 SRR1453341,SRR1471943,SRR600361, 22 0,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,1,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,2,0,0,0,2,0,0,0,3,1,1,0,0,0,0,1,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0 47 1,0,3,0,0,2,0,0,2,1,0,2,0,1,2,0,5,0,0,1,0,0,8,6,0,3,5,4,0,0,0,4,0,1,1,0,2,0,0,2,0,0,0,3,1,0,0,2,2,1,0,1,3,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,1,1,2,3,1,0,0,0,2,0,0,7,0,0,0,2,0,0,0,0,1,0,2,0,1,0,0,3,0,0,0,0,0,2,0,0,3,0,0,3,0,0,0,0,0,0,5,6,0 118 0.046554 1 chr15 50432338 50432499 + USP8, chr15 50432354 50432461 h38_mk_AluJo - 51 SRR1072367,SRR1084649,SRR1084842,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1356619,SRR1360128,SRR1360563,SRR1387264,SRR1387809,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1434526,SRR1435020,SRR1435293,SRR1442571,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR1498550,SRR601500,SRR602516,SRR602704,SRR614802,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818210, 87 1,1,1,2,4,1,0,0,1,1,2,3,1,1,3,0,3,4,2,0,1,2,5,0,3,2,2,1,0,2,1,0,2,1,1,1,2,0,0,0,7,4,1,1,1,2,1,2,2,2,0,2,2,3,2,1,1,1,3,1,5,1,0,2,2,2,1,0,0,1,2,0,5,6,2,1,4,0,0,5,1,4,0,1,2,0,3,0,10,0,2,0,0,4,0,3,2,0,2,0,2,0,4,0,1,6,2,0,7,8,9,3,0,3,2,5,1 102 2,0,1,6,1,3,3,1,3,5,5,3,1,1,4,3,7,2,1,0,7,4,12,4,6,8,9,1,5,1,4,0,7,2,3,1,4,1,0,1,3,6,0,3,2,5,2,3,3,2,4,5,3,3,3,2,0,8,1,5,13,1,3,7,1,3,1,4,2,3,3,0,4,1,4,6,8,1,0,5,3,6,0,7,4,3,1,0,7,1,2,3,3,12,4,8,10,4,3,7,0,3,8,0,6,4,4,0,6,32,6,5,0,6,0,11,5 113 0.596633 0 chr15 56890014 56890167 - ZNF280D, chr15 56890081 56890200 h38_mk_AluSz6 + 16 SRR1072367,SRR1077405,SRR1084842,SRR1102055,SRR1340508,SRR1341365,SRR1368772,SRR1413562,SRR1414897,SRR1415234,SRR1447693,SRR1464373,SRR1498550,SRR601500,SRR604262,SRR818033, 49 4,4,0,4,1,0,4,0,0,1,1,1,0,0,1,0,0,1,0,0,2,2,4,2,0,0,1,0,0,0,0,0,0,0,1,0,2,1,3,0,1,0,0,0,0,0,1,0,1,2,3,0,2,0,0,0,2,0,0,0,0,1,1,0,1,0,0,1,6,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,1,1,0,0,2,0,0,0,0,2,0,1,2,2,0,0,0,0,0,1,0,0,0,0,0,2,2,1,2,1,2,0,0 90 4,5,0,1,0,2,4,0,2,2,1,0,1,0,3,2,2,0,0,1,3,2,6,3,8,1,1,2,1,0,2,0,1,2,1,2,3,2,0,1,1,7,3,2,2,1,1,1,3,4,4,0,2,0,1,1,1,2,0,2,2,0,2,3,1,0,0,1,4,3,2,2,1,0,0,2,4,4,0,2,2,4,1,2,2,1,1,0,3,6,5,2,1,1,3,1,4,1,0,4,0,6,0,0,8,4,0,0,4,2,2,1,0,3,3,5,3 . . . chr15 64090198 64090315 - FAM96A, chr15 64090052 64090380 h38_mk_AluSx1 + 2 SRR1360563,SRR613627, 48 2,1,0,0,1,1,0,0,0,0,0,0,0,0,0,2,2,0,1,0,0,0,2,0,0,0,1,3,0,4,1,0,2,7,0,0,1,1,0,0,0,1,1,0,0,1,1,0,1,0,0,0,0,0,1,0,0,1,0,1,0,1,0,0,1,1,0,1,1,1,0,0,0,0,0,0,0,0,3,0,0,1,1,0,3,2,0,1,0,0,0,0,0,0,0,1,1,0,0,2,0,3,1,0,0,0,1,0,1,4,2,1,0,2,0,0,3 25 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,0,2,1,0,2,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,1,2,0,2,3,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,3,0,0,0,0,0,3,0,4,0,0,0,0,2,0,0 117 0.027750 0 chr15 65025057 65025228 - MTFMT, chr15 65025103 65025406 h38_mk_AluJ + 3 SRR1367943,SRR1455925,SRR1471943, 22 0,0,0,3,0,0,0,1,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,0,1,0,0,0,0,2,2,1,0,1,0,0,0,0,0,0,0,1,1,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0 19 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,1,0,2,0,0,0,0,2,0,0,1,0,1,0,2,1,4,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0 52 0.301282 0 chr15 65107209 65107326 - UBAP1L, chr15 65107266 65107373 h38_mk_AluSc + 1 SRR602516, 22 0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,5,1,2,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,1,0,0,1,0,1,0,0,0,0,1,0,7,0,0,0,1,0,4,0,0,0,0,0,0,0,0,1,0,0,0,3,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr15 68974729 68974832 + NOX5, chr15 68974695 68974773 h38_mk_AluJb - 4 SRR1317344,SRR1340508,SRR1485459,SRR661349, 33 0,0,0,4,0,1,0,1,0,0,1,1,0,2,0,0,0,0,0,0,1,0,4,0,1,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,1,0,0,1,0,0,1,0,0,0,0,0,4,0,0,0,0,1,1,1,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,5,0,0,2,0,0,0,1,0,3,4,0,2,0,3,1,1,0 35 0,1,0,0,0,0,1,0,0,0,2,1,0,0,0,0,0,1,0,0,0,0,2,0,1,0,3,0,0,1,2,0,0,0,0,0,2,1,0,0,0,0,1,1,1,0,0,0,1,2,0,0,0,0,0,2,1,0,0,1,0,0,0,0,0,1,0,0,1,1,1,0,0,0,0,2,0,0,0,1,0,0,0,2,1,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,1,0,0,3,1,0 . . . chr15 72798004 72798120 + ADPGK-AS1, chr15 72797971 72798143 h38_mk_AluJb - 1 SRR1487362, 98 2,0,15,7,2,1,1,2,3,2,0,5,7,10,3,2,9,3,0,4,2,2,9,1,5,0,5,4,0,4,10,3,3,2,3,3,5,1,2,11,1,3,2,4,1,4,1,7,2,2,0,0,4,4,4,2,3,4,1,8,11,2,4,3,6,7,4,3,6,0,5,6,0,5,1,1,0,11,7,1,2,9,9,5,2,43,2,4,14,4,3,0,2,3,0,2,2,9,2,7,2,1,2,0,4,3,0,0,3,0,0,4,0,1,4,0,3 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr15 74466036 74466130 + UBL7-AS1, chr15 74465971 74466297 h38_mk_AluSz - 34 SRR1072367,SRR1316940,SRR1320963,SRR1331579,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1360563,SRR1375571,SRR1381673,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1415234,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1435293,SRR1440986,SRR1444622,SRR1447693,SRR1471817,SRR604456,SRR607337,SRR657635,SRR657777,SRR661973,SRR662233,SRR818033, 70 5,0,0,0,2,0,0,0,0,2,1,1,0,2,1,0,1,1,1,0,0,2,4,3,1,2,3,0,0,1,2,0,0,2,0,1,0,2,4,0,1,2,1,2,1,3,0,2,0,1,2,0,0,2,4,2,4,2,1,1,4,1,1,0,2,1,1,0,1,3,1,0,1,0,2,0,0,0,4,1,1,2,0,0,3,0,0,0,0,0,1,1,0,0,0,0,1,1,2,2,0,0,1,0,2,1,1,0,1,4,2,1,0,0,3,0,8 91 1,5,0,2,5,5,4,1,0,4,1,1,0,3,0,1,5,0,1,2,1,0,6,4,5,4,4,1,2,0,2,0,0,1,2,0,3,1,4,2,2,2,2,3,2,4,1,3,0,0,4,4,1,4,2,0,2,4,3,0,2,1,0,3,3,2,5,2,2,0,5,0,0,3,2,0,4,1,10,2,2,1,1,0,1,2,1,1,4,3,1,0,1,1,3,1,5,1,2,2,0,0,0,0,8,9,2,2,2,2,6,1,5,6,2,0,1 92 0.990217 0 chr15 75007661 75007728 + SCAMP5, chr15 75007547 75007874 h38_mk_AluSc - 110 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 5,1,5,75,19,31,49,11,20,7,34,21,11,18,54,35,4,15,3,4,38,2,104,13,29,20,34,14,58,14,14,23,15,30,13,42,32,43,6,29,30,18,25,44,19,22,27,5,12,13,9,30,7,12,11,15,34,5,22,31,12,8,4,67,19,7,2,16,15,8,34,10,83,11,6,39,48,16,4,65,20,18,7,36,38,15,4,1,4,6,37,0,22,29,11,34,43,1,6,16,4,11,19,0,43,25,10,1,40,40,51,44,2,52,31,69,5 114 12,0,15,180,55,54,93,28,57,10,92,44,31,34,117,54,14,60,0,3,97,7,246,41,71,41,85,40,101,22,55,53,12,64,32,75,68,75,13,85,48,44,60,105,50,48,61,9,22,43,7,57,21,24,41,40,93,12,71,56,35,35,15,136,61,25,4,37,40,35,79,16,187,33,8,82,74,37,10,99,40,67,14,91,91,38,8,7,4,19,96,9,39,78,33,88,143,12,32,55,4,28,37,0,75,50,10,5,103,58,136,107,2,171,74,186,9 118 0.394222 1 chr15 75436346 75436443 - SIN3A, chr15 75436176 75436466 h38_mk_AluJo + 2 SRR1390601,SRR602516, 72 1,0,1,5,1,1,0,2,0,1,5,2,1,0,1,0,1,0,2,0,3,0,4,1,3,1,0,0,3,1,2,0,0,1,0,1,2,1,0,0,1,0,1,4,2,0,3,0,1,0,0,1,0,0,2,0,0,1,1,1,0,0,0,1,3,0,0,0,3,1,2,0,2,0,1,3,3,0,0,2,1,2,0,1,1,3,2,0,2,0,0,1,0,1,5,1,6,0,0,1,2,0,3,0,4,3,0,2,4,2,1,3,0,7,3,4,2 9 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0 113 0.258701 0 chr15 77284958 77285078 - PEAK1, chr15 77284923 77285107 h38_mk_AluSc8 + 62 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1316940,SRR1317344,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1360563,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1408368,SRR1415234,SRR1418127,SRR1421177,SRR1432123,SRR1434526,SRR1439873,SRR1440986,SRR1444678,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR614802,SRR657635,SRR657754,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 102 8,1,5,5,6,1,6,0,3,3,5,0,3,3,5,0,7,7,2,0,3,7,7,2,0,8,8,0,8,3,2,3,7,4,2,1,4,2,2,6,8,1,5,6,1,4,2,3,0,4,4,4,0,5,3,4,4,1,1,1,3,1,0,4,5,2,4,3,3,1,3,3,8,4,1,5,8,3,0,3,3,2,1,12,3,4,8,0,11,1,3,0,4,3,3,5,8,4,3,5,2,5,8,0,2,7,3,0,7,13,5,4,0,12,8,7,2 96 3,0,4,7,4,0,2,1,2,2,5,2,0,2,4,2,7,6,0,1,2,0,3,0,2,7,9,4,5,3,2,1,4,2,1,2,3,6,0,4,2,0,2,2,1,1,1,2,0,1,3,2,2,3,1,1,3,1,2,2,1,0,1,1,1,1,0,3,0,1,6,1,5,2,2,7,2,0,2,1,2,1,1,2,3,3,0,0,3,4,0,0,1,3,0,7,3,2,2,6,1,3,1,3,2,10,0,0,0,6,7,3,2,7,4,4,6 113 0.859181 0 chr15 79907629 79907684 - ST20, chr15 79907499 79907747 h38_mk_AluSx1 + 115 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 18,8,15,39,11,20,31,24,18,34,38,16,14,15,25,20,24,49,11,18,23,27,79,8,37,24,22,26,39,29,23,53,11,48,19,17,40,32,9,29,37,18,24,19,17,18,30,20,28,34,15,14,19,18,15,13,28,13,15,39,42,22,26,34,46,15,8,19,22,8,35,37,36,22,13,24,32,30,25,23,14,30,35,28,33,18,20,12,33,17,41,10,22,21,28,34,26,37,33,26,1,27,3,3,31,20,21,15,20,27,52,31,26,41,45,39,14 116 9,3,18,17,12,14,15,12,12,16,25,9,11,8,10,7,7,31,6,8,7,7,51,6,20,6,10,17,22,19,12,17,10,31,11,14,24,17,9,17,8,14,11,5,13,7,26,8,17,25,6,7,6,12,14,8,17,9,13,15,22,19,18,20,19,13,12,11,14,7,23,18,18,24,7,13,23,18,19,6,11,18,12,9,13,11,9,7,29,9,13,2,11,8,7,12,18,6,17,9,0,13,8,17,17,4,8,7,7,11,13,24,8,13,22,25,8 118 0.996863 1 chr15 79907629 79907706 - MTHFS,ST20,ST20-MTHFS, chr15 79907499 79907747 h38_mk_AluSx1 + 101 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1500868,SRR595926,SRR599510,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR658307,SRR661349,SRR662534,SRR814967,SRR818033,SRR818210,SRR1335446,SRR1375571,SRR1498550,SRR662233, 117 18,8,15,39,11,20,31,24,18,34,38,16,14,15,25,20,24,49,11,18,23,27,79,8,37,24,22,26,39,29,23,53,11,48,19,17,40,32,9,29,37,18,24,19,17,18,30,20,28,34,15,14,19,18,15,13,28,13,15,39,42,22,26,34,46,15,8,19,22,8,35,37,36,22,13,24,32,30,25,23,14,30,35,28,33,18,20,12,33,17,41,10,22,21,28,34,26,37,33,26,1,27,3,3,31,20,21,15,20,27,52,31,26,41,45,39,14 108 5,2,6,4,3,3,2,1,1,7,7,0,2,2,3,2,4,10,1,3,3,3,13,5,7,3,7,8,10,4,2,11,3,3,4,3,10,2,5,3,6,5,5,5,2,6,3,3,4,8,4,0,4,3,2,2,2,1,5,5,8,5,7,5,8,2,0,0,3,3,3,5,6,2,2,7,6,6,11,1,3,2,8,7,1,4,2,3,3,1,4,2,2,5,4,9,8,5,2,1,0,9,3,0,4,1,0,6,1,3,2,5,0,3,11,6,0 118 0.991649 1 chr15 82991932 82992046 - C15orf40, chr15 82991924 82992207 h38_mk_AluJ4 + 2 SRR1085495,SRR1418837, 87 5,4,4,1,1,1,0,2,0,2,1,1,1,0,1,2,5,1,2,1,1,9,6,0,3,1,1,2,1,1,0,4,0,2,0,3,0,3,0,1,0,2,0,1,3,8,3,4,0,0,5,0,1,0,1,2,3,2,2,1,0,0,3,2,2,1,0,0,4,2,2,0,1,0,0,2,3,3,4,1,3,6,4,4,4,1,3,1,7,0,1,0,1,3,4,3,2,2,0,6,1,1,0,0,6,1,0,7,1,5,2,0,16,3,3,5,0 34 6,5,14,0,4,0,0,0,1,1,0,0,0,0,0,1,3,0,1,0,0,2,0,0,11,0,0,0,1,0,0,0,0,0,0,7,1,0,0,0,1,0,0,0,0,2,0,9,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,7,0,5,0,1,0,0,8,1,0,0,0,0,1,0,0,0,0,6,0,0,9,0,4,0,0,7,0,6,0,0,0,1,0,1,0 . . . chr15 91023313 91023594 + AC068831.1, chr15 91023273 91023602 h38_mk_AluSz - 3 SRR1408368,SRR1498550,SRR661349, 59 0,1,0,0,0,1,3,0,1,2,1,1,0,0,4,0,1,3,0,1,0,1,8,0,0,0,0,0,2,0,0,2,0,0,1,1,0,2,0,2,0,2,2,0,0,1,1,3,0,2,0,1,0,0,4,0,1,0,1,2,2,0,0,0,2,0,1,1,1,0,1,0,0,1,1,1,0,1,0,0,0,3,1,3,0,1,0,0,5,1,0,0,1,1,0,0,0,0,1,2,0,0,0,9,0,3,2,1,1,1,0,3,1,0,1,0,0 18 1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,3,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,1,0 . . . chr15 99234988 99235080 - TTC23, chr15 99234956 99235278 h38_mk_AluJb + 4 SRR1316940,SRR1435020,SRR1457482,SRR818210, 34 0,0,0,0,0,2,0,0,0,1,0,0,0,0,1,1,0,0,0,0,1,0,2,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,1,0,1,1,0,0,1,0,1,0,1,0,1,1,1,1,0,0,2,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,1,1,0,0,2,2 31 3,0,0,0,0,1,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,1,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,1,0,1,0,0,0,1,0,0,1,1,0,0,0,0,0,1,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,1,0,2,1,0,4,0,0,0,0,0,0,0,1,0,2,2,0 106 0.247166 0 chr15 99245389 99245510 - TTC23, chr15 99245220 99245542 h38_mk_AluSz + 44 SRR1318163,SRR1320963,SRR1326179,SRR1331579,SRR1335446,SRR1337412,SRR1340508,SRR1342045,SRR1348159,SRR1356619,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1413562,SRR1416477,SRR1418127,SRR1418837,SRR1435020,SRR1435293,SRR1440986,SRR1444622,SRR1453851,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1476571,SRR1485459,SRR1487362,SRR1498550,SRR602516,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR658307,SRR662534,SRR818210,SRR821602, 95 0,2,0,1,0,4,3,3,1,7,0,1,3,3,4,0,3,1,3,1,1,6,4,0,1,3,4,1,0,3,1,3,0,1,1,1,3,1,3,3,3,3,0,2,1,1,1,2,4,1,2,2,1,2,3,0,4,0,2,1,2,2,1,3,1,1,4,2,1,1,2,2,2,6,4,3,3,0,0,2,0,1,1,4,2,6,4,0,3,1,1,4,0,1,3,2,1,3,10,6,0,3,1,0,5,2,6,5,4,9,0,3,0,0,0,1,2 83 2,1,0,1,0,1,0,2,0,0,3,1,1,3,3,0,2,1,1,0,1,2,6,0,1,5,5,0,0,0,1,0,3,0,1,0,3,0,1,1,3,4,0,2,1,0,1,2,3,1,0,2,1,5,4,1,1,0,1,1,2,1,1,2,4,0,3,1,1,3,3,0,1,4,5,4,4,2,1,0,3,0,6,3,1,6,1,0,4,2,0,0,0,0,0,1,2,5,6,7,1,7,0,22,2,5,1,5,0,0,0,2,1,1,0,1,3 99 0.942368 0 chr15 99620873 99621080 + MEF2A, chr15 99620834 99621154 h38_mk_AluSx1 - 13 SRR1085495,SRR1340508,SRR1341365,SRR1375571,SRR1457482,SRR1464373,SRR599510,SRR613627,SRR614802,SRR657754,SRR662534,SRR814967,SRR818210, 29 2,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,3,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,1,1,3,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,2,0,0,2,0,0,1,3,0,0,2,0,0,0,0,2,3,0,2,0,2,0 102 8,2,1,3,8,3,10,1,1,3,3,6,2,4,5,0,1,2,6,3,5,4,11,3,4,4,2,1,2,1,1,1,1,1,0,2,1,5,1,2,4,6,5,2,3,5,1,1,0,1,3,2,2,5,0,3,1,0,4,1,1,2,0,5,2,2,0,1,1,2,1,3,4,4,0,6,1,4,0,5,2,0,0,1,4,11,3,0,2,1,2,3,3,1,3,5,6,1,1,2,1,6,2,0,7,9,0,4,2,7,5,6,0,3,9,10,3 115 0.189803 0 chr1 60528919 60529249 - LINC01748, chr1 60528958 60529261 h38_mk_AluSz + 9 SRR1084842,SRR1317344,SRR1340508,SRR1440986,SRR1444622,SRR1485459,SRR602704,SRR604456,SRR818033, 81 1,0,1,2,6,2,2,0,3,5,2,0,1,0,1,5,3,2,0,2,1,2,5,1,4,0,0,0,1,13,1,1,0,1,0,0,3,6,5,1,2,8,1,1,0,0,4,0,6,2,2,0,1,5,1,0,4,4,5,5,0,0,0,0,6,4,3,1,0,1,0,0,3,7,0,7,3,0,0,2,0,5,1,3,1,0,2,2,0,4,5,0,2,2,0,0,5,1,5,4,0,7,0,0,11,1,3,2,4,2,0,2,1,6,2,1,3 16 0,0,0,1,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,1,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 . . . chr16 10428868 10429016 + ATF7IP2, chr16 10428867 10429037 h38_mk_AluJo - 38 SRR1084842,SRR1085495,SRR1317344,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1340508,SRR1354446,SRR1360128,SRR1368772,SRR1375571,SRR1387264,SRR1390601,SRR1399779,SRR1408208,SRR1416477,SRR1434526,SRR1440986,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1485459,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR602704,SRR604262,SRR604456,SRR613627,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210, 66 3,0,0,1,2,0,0,0,3,0,1,0,0,2,7,3,3,3,0,0,0,1,4,0,1,2,2,0,3,1,0,0,2,2,1,0,1,3,0,1,4,0,1,2,4,0,2,0,0,1,0,1,0,0,1,0,0,1,4,1,0,0,0,0,2,0,1,1,1,0,2,1,1,2,0,2,2,0,0,1,1,0,0,1,2,3,3,0,1,0,6,0,1,0,1,0,3,4,1,0,0,2,0,0,0,0,1,2,4,14,6,0,0,5,3,4,0 83 0,1,3,5,5,0,0,3,2,0,4,0,1,1,5,2,13,1,0,2,4,0,10,0,6,0,2,2,3,1,2,2,2,0,0,1,3,4,0,1,3,0,2,2,6,2,3,0,0,0,0,1,1,2,0,1,5,0,2,1,1,1,0,3,2,0,2,1,0,0,1,1,4,3,0,2,6,1,0,2,0,2,0,3,5,2,5,0,3,1,2,0,2,3,5,7,3,4,8,4,0,7,3,0,1,6,2,0,2,9,15,5,0,7,4,3,0 . . . chr16 11551707 11551804 - LITAF, chr16 11551551 11551857 h38_mk_AluJ + 2 SRR1102055,SRR600361, 23 3,0,0,0,0,1,1,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,1,2,2,0,2,0,0,0,4,1,0,0,1,1,0,1,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0 56 0,0,7,1,0,0,1,0,0,3,1,0,1,2,3,2,4,0,3,1,1,0,2,1,1,1,0,1,0,2,1,0,2,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,1,0,1,1,0,0,2,0,1,1,1,0,0,1,0,0,0,2,2,2,1,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,1,2,2,0,4,1,0,0,2,1,1,0,0,2,2,0,0,0,0,0,2,1,0,0,2,5,0,0,0,3,1,0,2 118 0.025044 1 chr16 124937 125073 - NPRL3, chr16 124785 125107 h38_mk_AluSx1 + 107 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 117 15,6,8,14,17,12,6,6,19,13,7,9,11,5,14,6,13,19,3,2,8,7,29,4,8,16,13,8,11,22,13,8,7,14,4,3,3,11,3,23,7,4,6,8,9,7,12,6,10,10,11,7,8,8,12,6,12,14,6,6,6,6,3,15,13,7,8,14,9,9,14,9,23,22,3,12,9,4,5,12,4,16,3,17,7,5,6,6,8,10,15,1,17,20,19,22,17,8,8,22,1,15,9,13,14,7,2,7,5,7,7,8,6,14,19,17,4 114 10,3,3,10,8,5,5,5,4,10,3,5,2,5,5,6,3,15,6,6,5,2,18,2,4,13,7,7,3,8,5,12,11,8,1,8,3,10,2,7,14,3,2,13,3,4,7,6,5,7,7,4,4,7,4,8,6,10,1,4,6,2,1,11,7,4,3,8,1,5,6,3,12,14,3,7,4,2,2,7,3,6,4,23,9,1,2,4,7,10,5,1,5,13,7,18,13,5,8,12,0,16,2,0,8,1,4,0,8,2,12,5,2,4,8,12,4 118 0.422857 1 chr16 1369934 1369988 - UNKL, chr16 1369690 1369983 h38_mk_AluS + 1 SRR661973, 15 0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,2,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,1,0 6 0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0 118 0.022510 1 chr16 15399431 15399548 + AC140504.1, chr16 15399394 15399631 h38_mk_AluJ - 53 SRR1072367,SRR1077405,SRR1084842,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1320963,SRR1326179,SRR1333741,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1360563,SRR1375571,SRR1386708,SRR1390601,SRR1402900,SRR1408368,SRR1413562,SRR1415234,SRR1421177,SRR1432123,SRR1435020,SRR1440986,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487685,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR602704,SRR604262,SRR613627,SRR614802,SRR657635,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 89 1,2,1,4,1,2,4,1,0,3,5,3,1,2,8,4,2,1,2,0,0,2,10,1,1,1,3,0,1,1,0,1,0,1,1,1,1,4,0,1,2,1,1,3,2,5,2,3,3,1,4,0,1,0,0,1,4,0,1,3,5,0,0,2,2,0,1,0,2,1,1,0,5,1,2,4,3,0,0,4,4,2,0,1,1,3,3,0,2,1,1,0,4,1,0,2,3,2,0,2,0,3,2,0,2,0,0,2,1,6,3,7,0,1,5,3,1 97 2,4,0,4,1,5,4,2,3,2,6,1,2,3,4,1,1,2,0,0,1,4,10,2,2,1,3,0,0,2,2,0,1,2,1,4,1,8,1,2,1,2,1,5,0,2,2,5,6,1,4,1,3,0,1,1,5,0,3,2,1,1,0,4,3,1,3,2,4,1,4,0,3,1,0,8,0,1,5,5,7,2,1,1,1,1,1,0,2,2,2,2,4,5,0,9,4,1,0,3,1,4,3,0,3,1,0,1,2,4,2,1,0,5,5,6,0 112 0.753151 0 chr16 15651931 15652050 + NDE1, chr16 15651917 15652206 h38_mk_AluSx4 - 1 SRR1315970, 1 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 67 4,6,0,2,2,2,1,1,1,0,1,0,1,1,6,3,2,1,0,0,0,2,1,1,0,1,1,2,0,1,3,0,1,0,0,1,3,0,1,0,0,1,0,1,0,0,0,1,2,1,1,0,0,1,3,0,0,0,0,2,1,0,0,2,0,2,1,0,0,1,1,0,0,5,0,1,2,2,0,0,1,3,0,0,3,0,1,0,3,0,0,1,1,0,2,1,4,0,1,2,1,0,3,0,1,0,0,0,2,2,1,0,5,1,0,2,0 115 0.175947 0 chr1 61686792 61686921 - TM2D1, chr1 61686806 61686944 h38_mk_AluJo + 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 14,8,24,32,24,24,11,27,21,28,24,14,26,20,34,17,27,24,6,13,24,18,93,15,23,27,36,16,27,29,16,45,28,32,18,34,25,26,12,26,54,48,27,30,26,26,33,25,21,22,22,20,12,22,17,21,46,12,29,21,44,23,22,36,20,21,28,20,17,25,43,15,25,22,18,28,43,22,41,32,29,29,23,29,49,38,29,13,25,14,27,3,25,22,33,26,17,20,17,25,4,24,18,23,61,43,9,12,43,47,33,30,9,51,48,27,22 116 13,2,10,36,20,17,9,25,10,18,16,10,25,19,32,15,22,23,10,7,24,16,92,13,25,18,22,7,13,24,19,21,14,23,17,25,32,22,9,30,28,50,12,25,27,30,24,14,22,25,11,10,7,14,12,18,34,9,18,19,39,12,8,23,32,13,29,12,21,15,33,6,19,25,12,27,38,13,23,23,10,29,28,24,35,18,20,14,21,15,20,3,19,19,27,25,26,12,16,27,2,21,11,0,34,26,8,29,9,19,32,25,9,34,23,21,14 118 0.280243 1 chr16 1783877 1784066 + NUBP2, chr16 1783690 1784002 h38_mk_AluY - 3 SRR1326179,SRR1399779,SRR1498550, 47 0,0,2,0,0,0,1,0,1,0,1,0,0,0,3,0,1,0,0,0,0,0,1,0,0,0,1,0,1,2,0,3,0,1,1,1,0,0,1,0,0,1,0,0,2,1,2,0,1,0,0,0,0,1,1,0,1,0,1,0,2,0,0,0,2,0,0,0,1,1,0,1,0,0,1,1,2,0,2,0,1,1,0,0,1,0,0,1,2,0,0,0,0,0,0,0,0,2,1,1,0,2,0,0,0,1,0,0,2,0,0,1,0,0,1,1,0 88 1,0,4,1,3,1,0,0,2,0,1,1,3,0,2,0,4,2,5,2,1,3,6,3,1,1,2,0,1,4,0,0,1,4,1,2,0,1,0,4,3,2,2,3,5,1,5,1,0,2,0,1,0,2,2,0,0,3,3,2,1,0,0,4,2,0,3,5,3,3,1,0,0,1,0,1,2,5,0,2,2,1,0,3,1,1,1,3,3,1,2,0,3,1,1,0,5,2,1,1,0,3,1,1,16,1,0,1,1,2,1,2,2,1,6,0,1 118 0.032520 1 chr16 1838016 1838134 + FAHD1, chr16 1837989 1838309 h38_mk_AluJ - 53 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1340508,SRR1341763,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1399779,SRR1408208,SRR1408368,SRR1414897,SRR1432123,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1487194,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210,SRR821602, 87 0,0,2,1,2,3,2,1,2,1,0,2,2,2,2,2,0,5,1,0,1,0,11,0,4,0,0,1,1,1,2,1,2,3,2,0,1,3,1,4,1,3,2,2,4,1,3,1,1,2,1,1,0,1,0,2,4,0,0,1,4,3,2,2,3,3,2,2,5,1,0,0,5,0,1,5,3,2,1,5,1,2,1,0,3,0,1,0,2,1,8,2,0,2,1,1,6,1,2,2,0,0,1,0,0,0,0,0,3,2,1,0,0,7,3,4,2 102 1,0,1,9,10,3,5,1,2,3,1,2,0,6,3,3,0,7,1,0,5,2,11,2,7,1,4,2,4,2,4,9,1,6,3,0,9,3,1,2,6,0,4,0,5,5,4,4,1,6,1,2,3,1,4,0,4,1,1,2,6,1,5,5,6,3,3,0,5,1,5,2,4,5,0,4,6,9,2,6,3,1,1,3,3,1,0,2,0,6,7,1,3,6,4,3,7,3,0,4,0,2,2,6,11,4,2,3,6,9,11,1,0,9,6,12,2 114 0.876519 0 chr16 2094889 2095086 - PKD1, chr16 2094983 2095087 h38_mk_AluJb + 2 SRR1320115,SRR1454803, 101 0,0,5,32,16,9,13,16,10,0,15,4,9,6,16,13,5,4,0,1,15,0,22,7,2,2,14,13,12,11,11,11,0,12,12,10,0,1,1,9,9,16,10,7,14,8,42,2,1,15,3,11,0,7,12,11,21,0,3,11,4,4,0,16,14,13,2,0,8,10,6,12,10,6,1,5,10,14,0,15,14,11,4,38,18,15,3,1,3,4,14,0,5,11,7,22,23,10,3,12,2,30,7,6,5,6,0,3,8,3,26,19,0,23,35,22,0 46 0,0,0,0,0,0,1,0,3,0,0,0,5,0,3,0,2,0,0,0,3,0,4,0,0,0,3,3,4,1,3,4,2,0,3,0,0,0,0,0,2,1,0,0,2,0,4,1,0,0,1,3,0,0,0,1,5,0,0,1,0,2,0,0,0,0,0,2,2,0,0,6,5,1,0,0,1,1,0,0,3,0,0,0,0,6,0,0,1,0,0,0,0,1,1,4,1,0,0,1,0,0,0,0,2,0,0,0,2,1,1,0,0,0,0,4,0 118 0.045355 1 chr16 2094889 2095090 - PKD1, chr16 2094983 2095087 h38_mk_AluJb + 3 SRR1314163,SRR1315970,SRR1447693, 101 0,0,5,32,16,9,13,16,10,0,15,4,9,6,16,13,5,4,0,1,15,0,22,7,2,2,14,13,12,11,11,11,0,12,12,10,0,1,1,9,9,16,10,7,14,8,42,2,1,15,3,11,0,7,12,11,21,0,3,11,4,4,0,16,14,13,2,0,8,10,6,12,10,6,1,5,10,14,0,15,14,11,4,38,18,15,3,1,3,4,14,0,5,11,7,22,23,10,3,12,2,30,7,6,5,6,0,3,8,3,26,19,0,23,35,22,0 59 0,0,0,4,4,0,4,8,7,0,5,3,1,4,6,2,0,5,0,1,5,0,8,4,0,0,5,3,2,1,5,0,0,0,3,0,0,2,0,3,1,6,4,1,4,4,8,0,0,0,0,4,0,0,0,4,5,1,0,0,0,0,1,0,0,0,0,3,8,0,0,0,0,3,0,3,3,0,0,4,0,0,0,8,0,4,3,0,0,4,2,0,3,3,4,8,7,0,0,7,0,4,0,0,0,0,0,1,0,0,9,4,0,0,7,1,0 118 0.048848 1 chr16 22854664 22854781 + HS3ST2, chr16 22854630 22854949 h38_mk_AluJ - 11 SRR1084842,SRR1314163,SRR1333741,SRR1360563,SRR1455925,SRR1471943,SRR601500,SRR602314,SRR602516,SRR607337,SRR818033, 62 0,0,2,4,0,0,8,45,0,1,3,0,0,0,3,4,0,2,0,0,0,0,14,0,1,0,2,4,4,1,0,3,0,4,0,0,0,0,0,10,3,2,2,0,3,1,2,0,0,1,1,0,0,0,1,3,0,0,5,0,0,4,0,2,0,0,1,1,2,3,3,0,9,1,0,0,4,0,1,7,0,2,0,0,3,1,0,0,0,0,0,0,2,4,2,5,3,0,1,2,1,3,3,0,0,3,0,0,1,3,9,0,3,5,10,0,3 20 0,0,0,2,0,0,0,42,2,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,2,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,7,0,0,0,3,0,0,0,0,0,0,0,0,0,6,2,12,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,2,0 37 0.453185 0 chr16 23657486 23657586 + DCTN5, chr16 23657455 23657751 h38_mk_AluSq2 - 36 SRR1099499,SRR1315970,SRR1320115,SRR1328895,SRR1337098,SRR1341365,SRR1348159,SRR1354446,SRR1356619,SRR1360563,SRR1387264,SRR1390601,SRR1399779,SRR1402900,SRR1414897,SRR1432123,SRR1433796,SRR1435293,SRR1439873,SRR1440986,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR600361,SRR602314,SRR602516,SRR602704,SRR657635,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967, 114 2,0,6,8,3,3,5,6,6,10,8,1,6,1,7,4,4,5,6,2,6,1,13,2,3,3,8,4,8,4,6,4,1,12,4,4,7,1,2,5,6,9,4,11,5,6,5,2,3,4,3,5,1,4,6,6,7,1,3,3,2,6,2,8,7,4,4,2,7,3,3,4,10,6,4,7,13,3,3,2,1,5,6,3,7,9,9,2,4,3,5,0,6,1,5,6,12,6,3,5,2,8,3,0,8,11,4,5,4,9,11,4,4,8,3,5,2 77 0,0,0,2,0,3,0,0,1,1,4,0,1,1,0,4,2,0,1,0,5,1,1,1,1,2,3,0,3,1,1,2,1,1,2,1,2,4,0,1,2,5,2,5,1,1,0,0,2,1,1,0,0,0,2,0,3,1,0,4,2,1,1,3,5,1,0,0,0,0,1,0,3,0,0,3,3,1,0,3,0,0,0,2,1,2,2,1,0,0,2,3,1,1,2,2,2,1,0,2,0,0,1,0,9,1,2,0,6,5,10,1,0,6,0,3,0 118 0.186856 1 chr16 28538526 28538654 - NUPR1, chr16 28538398 28538708 h38_mk_AluJo + 3 SRR1399779,SRR1437538,SRR1487362, 34 1,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,3,1,0,2,0,5,1,1,1,0,1,2,0,0,0,0,0,0,0,0,5,0,0,0,1,3,0,1,1,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,6,0,4,1,2,1,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,143,0,0,12,0,0,0,0,0,0,0,0,0,3,1,0,0,0,5,2,0,0,0,0,0,0,0,1,3,0,0,0 23 0,0,0,2,0,0,0,0,0,0,1,1,0,1,1,0,0,0,0,3,1,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,2,0,4,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,119,0,2,8,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 118 0.009545 1 chr16 29819012 29819202 + PRRT2, chr16 29818971 29819276 h38_mk_AluSx3 - 1 SRR1487362, 39 2,0,0,0,0,2,5,2,0,2,0,0,0,0,0,2,0,0,0,0,0,0,4,0,0,0,0,12,0,0,0,2,0,0,0,0,0,0,0,5,0,2,0,0,2,0,0,0,0,0,0,7,2,3,0,1,0,3,3,0,0,0,0,0,7,0,0,0,0,0,0,3,0,0,0,1,3,0,0,0,0,5,0,7,0,7,0,0,0,1,0,0,1,0,0,8,0,1,0,1,0,3,0,17,3,0,0,1,1,0,3,3,0,2,4,0,0 11 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,2,0,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,7,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.009831 1 chr16 31115718 31115869 + KAT8, chr16 31115516 31115836 h38_mk_AluJ - 2 SRR1402900,SRR1474777, 6 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 91 0,0,2,6,10,3,9,8,5,6,7,2,0,2,8,4,1,4,0,0,0,1,7,8,9,0,6,0,2,2,3,13,1,3,1,2,0,4,0,5,6,6,5,1,4,5,9,0,9,3,0,2,1,0,1,0,13,2,6,7,0,1,5,4,12,3,3,1,4,6,3,0,4,10,3,4,3,8,0,9,0,4,1,12,4,4,3,0,0,2,7,0,3,8,14,8,3,2,2,11,0,12,6,0,10,9,4,0,2,4,7,4,0,6,9,9,0 . . . chr16 31115721 31115869 + KAT8, chr16 31115516 31115836 h38_mk_AluJ - 1 SRR607337, 2 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 91 0,0,2,6,10,3,9,8,5,6,7,2,0,2,8,4,1,4,0,0,0,1,7,8,9,0,6,0,2,2,3,13,1,3,1,2,0,4,0,5,6,6,5,1,4,5,9,0,9,3,0,2,1,0,1,0,13,2,6,7,0,1,5,4,12,3,3,1,4,6,3,0,4,10,3,4,3,8,0,9,0,4,1,12,4,4,3,0,0,2,7,0,3,8,14,8,3,2,2,11,0,12,6,0,10,9,4,0,2,4,7,4,0,6,9,9,0 . . . chr1 63510065 63510181 - ITGB3BP, chr1 63509903 63510225 h38_mk_AluSq2 + 16 SRR1328895,SRR1331579,SRR1337098,SRR1356619,SRR1367943,SRR1386708,SRR1387264,SRR1387809,SRR1418127,SRR1435775,SRR1453851,SRR1454803,SRR1468514,SRR1485459,SRR613627,SRR661349, 50 0,0,1,0,1,0,5,1,0,0,0,1,0,0,0,1,2,2,0,1,1,0,1,0,0,1,1,1,0,0,2,0,0,1,1,1,2,0,0,3,1,1,0,0,0,1,3,2,0,0,0,0,0,2,0,0,0,0,0,0,1,2,0,2,0,0,0,0,0,0,2,2,0,0,1,0,2,0,1,0,0,0,1,5,1,0,1,0,0,1,1,0,1,1,1,1,0,0,0,2,0,1,0,0,1,0,0,3,1,0,0,0,0,0,0,2,0 54 1,0,0,0,0,0,2,1,2,0,1,0,0,1,1,1,2,1,0,1,2,0,2,0,2,1,0,1,0,0,2,0,1,0,0,1,1,0,0,3,1,3,0,0,0,1,0,2,0,0,0,0,0,2,0,1,0,0,0,2,0,1,0,1,0,0,0,0,0,0,2,5,2,0,0,1,3,0,0,1,1,0,0,4,3,1,0,0,3,0,1,0,0,0,1,1,0,2,0,1,0,3,1,16,0,0,0,0,3,0,1,1,0,0,3,3,0 118 0.091517 1 chr16 4325616 4325763 - GLIS2-AS1, chr16 4325636 4325966 h38_mk_AluJo + 1 SRR1442571, 37 0,0,0,2,0,0,3,0,2,0,1,0,0,0,1,0,0,0,0,0,0,0,6,2,2,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,6,1,0,0,2,0,2,0,1,2,0,1,0,0,3,3,0,1,0,0,1,0,1,0,1,0,0,1,1,0,0,2,0,0,1,0,0,1,0,0,0,2,0,0,1,2,0,0,0,0,0,0,0,0,0,0,1,0,0,6,2,0,0,0,0,0,1,0,0,0,1,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0 . . . chr16 4469504 4469698 - NMRAL1, chr16 4469673 4469892 h38_mk_AluSz6 + 64 SRR1084842,SRR1099499,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1367943,SRR1368772,SRR1386708,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1415234,SRR1416477,SRR1434526,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1455925,SRR1468514,SRR1468955,SRR1471943,SRR1474777,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR599510,SRR602314,SRR613627,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 108 0,9,3,5,0,5,2,1,5,27,2,6,3,4,7,7,1,13,10,0,6,3,18,1,4,3,8,4,9,4,7,17,12,9,1,6,8,1,1,10,2,13,4,7,6,8,5,4,1,8,4,13,2,3,3,4,5,7,6,0,9,5,4,10,16,3,2,3,5,3,4,2,5,3,1,1,25,4,2,9,2,8,4,2,2,12,7,6,6,1,3,4,8,1,3,0,3,0,0,1,0,3,0,1,3,15,10,7,12,21,12,4,9,18,6,11,11 97 0,1,1,3,0,7,0,0,7,14,1,7,8,2,10,2,5,3,7,0,4,2,13,2,8,2,8,1,2,1,4,5,7,2,7,4,4,0,0,3,0,2,0,6,10,1,4,4,0,2,3,2,0,1,1,2,2,2,3,3,4,3,3,15,10,0,1,3,1,1,2,2,3,1,3,4,14,3,0,6,3,4,1,0,4,5,6,2,2,2,3,2,1,2,4,0,4,1,0,1,0,2,0,0,0,13,4,5,5,3,7,4,7,8,11,9,11 116 0.891922 0 chr16 4469573 4469698 - NMRAL1, chr16 4469673 4469892 h38_mk_AluSz6 + 1 SRR661349, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0 97 0,1,1,3,0,7,0,0,7,14,1,7,8,2,10,2,5,3,7,0,4,2,13,2,8,2,8,1,2,1,4,5,7,2,7,4,4,0,0,3,0,2,0,6,10,1,4,4,0,2,3,2,0,1,1,2,2,2,3,3,4,3,3,15,10,0,1,3,1,1,2,2,3,1,3,4,14,3,0,6,3,4,1,0,4,5,6,2,2,2,3,2,1,2,4,0,4,1,0,1,0,2,0,0,0,13,4,5,5,3,7,4,7,8,11,9,11 118 0.049424 1 chr16 4471314 4471449 - NMRAL1, chr16 4471326 4471650 h38_mk_AluJb + 72 SRR1084842,SRR1102055,SRR1316940,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1457482,SRR1464373,SRR1468514,SRR1471817,SRR1474777,SRR1487194,SRR1487362,SRR1488651,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR607337,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661973,SRR662233,SRR662534,SRR814967,SRR821602, 106 4,3,1,9,2,2,13,0,1,6,0,3,1,1,4,2,3,2,2,0,2,2,7,9,4,2,4,1,11,3,5,5,0,8,5,4,3,3,0,0,5,17,4,6,6,10,5,3,11,3,2,4,3,3,2,2,5,1,5,5,4,3,1,5,11,1,3,2,7,6,2,2,2,5,1,6,13,2,6,7,1,3,3,1,4,7,0,3,0,0,2,1,7,2,2,5,3,1,0,6,0,3,3,8,19,7,1,6,4,6,7,4,1,7,10,1,7 108 0,1,2,6,1,1,9,1,2,5,2,6,3,4,3,5,4,1,12,0,2,1,8,6,7,3,4,0,7,5,2,7,2,4,4,5,1,6,0,8,4,8,6,7,5,5,5,2,2,1,6,4,0,2,8,4,3,4,4,2,3,8,3,8,12,2,7,2,3,4,3,4,3,3,3,3,12,5,3,1,0,4,1,1,4,6,2,4,5,1,3,3,4,3,0,5,3,1,2,3,0,0,5,4,12,7,3,4,1,8,13,6,3,7,2,2,2 118 0.108678 1 chr16 4483637 4483754 + HMOX2, chr16 4483598 4483921 h38_mk_AluSz - 105 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 6,3,5,18,14,8,8,9,14,19,19,1,8,6,16,8,8,9,2,2,13,4,59,12,14,6,13,6,12,3,8,8,8,13,4,3,24,13,3,14,9,13,14,21,14,7,10,8,6,9,3,7,2,3,7,14,17,7,12,20,12,13,15,18,8,6,6,4,11,3,18,10,18,12,5,20,8,7,13,16,14,13,4,12,9,11,6,2,1,8,18,1,13,8,6,16,24,1,9,8,0,11,8,7,21,4,4,8,9,18,27,24,4,22,12,24,4 115 8,4,12,24,10,6,11,13,15,13,22,7,9,10,13,5,14,12,3,2,19,7,77,9,17,11,9,9,17,6,7,11,2,16,2,22,16,19,4,20,14,6,9,19,16,12,23,5,7,6,7,7,4,4,5,12,17,10,9,17,14,10,11,14,10,7,1,3,13,10,13,7,28,12,4,21,12,12,12,25,20,24,3,10,22,6,7,0,4,6,29,4,14,17,9,25,23,4,10,17,0,15,9,7,10,11,5,9,15,31,37,20,3,32,14,35,5 118 0.148281 1 chr16 4496146 4496266 + HMOX2, chr16 4496108 4496433 h38_mk_AluSz - 1 SRR1341763, 70 0,0,1,3,1,1,7,0,2,1,3,1,1,1,1,0,0,0,0,0,1,0,9,2,6,3,1,1,1,3,0,2,1,1,1,0,4,0,0,0,1,1,1,1,1,0,3,0,1,0,0,0,0,0,0,2,2,0,0,2,1,4,1,3,3,5,0,1,1,2,3,0,4,1,0,2,2,0,0,2,2,1,0,0,4,0,1,0,1,0,2,0,0,2,0,2,1,0,0,3,1,0,0,0,2,0,2,0,3,0,12,0,2,6,0,4,1 83 0,0,1,5,0,1,4,0,4,2,4,0,2,2,2,2,1,0,0,0,3,0,10,1,8,1,1,1,4,2,1,0,3,1,1,3,5,0,0,2,1,1,2,3,5,2,4,0,1,3,1,0,1,0,2,2,7,0,1,1,0,2,1,1,2,0,2,1,5,2,2,0,9,4,0,3,4,1,1,3,1,3,0,2,7,1,0,0,0,0,2,0,3,1,0,3,1,0,0,0,0,0,1,2,2,2,2,2,4,1,6,3,4,5,0,4,0 118 0.022201 1 chr16 4502744 4502959 + HMOX2, chr16 4502709 4502868 h38_mk_AluSx - 1 SRR1439873, 4 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 116 9,1,13,23,9,12,10,11,8,6,11,10,2,7,16,11,6,6,9,1,11,8,45,9,11,6,9,8,22,8,9,8,2,9,3,17,11,12,4,16,14,4,4,13,11,10,14,5,5,12,2,7,2,10,1,9,15,11,14,14,3,10,11,19,9,4,8,5,7,8,7,10,20,6,5,10,10,12,4,8,11,11,1,7,15,9,3,4,11,6,15,0,16,9,5,26,19,5,7,10,2,14,1,30,7,21,2,9,14,23,22,13,4,20,21,18,4 . . . chr16 4502744 4502959 + HMOX2, chr16 4502849 4503123 h38_mk_AluS - 1 SRR1439873, 4 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 116 9,1,13,23,9,12,10,11,8,6,11,10,2,7,16,11,6,6,9,1,11,8,45,9,11,6,9,8,22,8,9,8,2,9,3,17,11,12,4,16,14,4,4,13,11,10,14,5,5,12,2,7,2,10,1,9,15,11,14,14,3,10,11,19,9,4,8,5,7,8,7,10,20,6,5,10,10,12,4,8,11,11,1,7,15,9,3,4,11,6,15,0,16,9,5,26,19,5,7,10,2,14,1,30,7,21,2,9,14,23,22,13,4,20,21,18,4 . . . chr16 53622219 53622356 - RPGRIP1L, chr16 53622073 53622389 h38_mk_AluSx3 + 57 SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1416477,SRR1418837,SRR1432123,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468955,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR601500,SRR602314,SRR602516,SRR602704,SRR613627,SRR657635,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 110 3,0,1,8,1,3,3,3,5,6,8,0,7,2,5,5,2,1,3,1,6,2,11,4,1,4,4,4,5,5,5,2,1,1,2,2,2,2,5,4,1,4,3,9,6,2,8,2,2,2,3,4,0,5,4,3,4,2,3,3,2,1,3,2,2,2,2,0,1,5,4,2,11,1,3,8,7,1,1,5,3,6,2,7,5,3,2,2,0,1,1,1,4,7,3,4,3,4,4,2,0,6,4,0,4,4,1,5,4,23,11,9,4,8,3,11,2 89 0,0,2,4,1,3,2,1,2,2,5,1,4,2,3,1,1,2,0,0,2,0,7,1,1,1,3,3,5,5,5,1,0,3,3,3,0,2,0,5,5,6,1,4,3,3,6,1,0,0,1,3,0,2,4,1,4,3,0,5,2,2,0,5,2,0,0,3,1,2,2,1,6,0,1,5,1,1,0,0,2,5,1,2,3,1,2,0,1,0,1,0,0,3,1,2,2,0,1,2,0,5,1,0,9,0,0,5,1,7,3,3,0,8,1,2,1 117 0.502585 0 chr16 56103694 56103838 - AC007495.1, chr16 56103541 56103876 h38_mk_AluJ + 3 SRR1435293,SRR1444678,SRR1464373, 57 2,1,0,1,0,0,0,0,2,1,0,1,3,0,1,0,3,2,1,0,5,0,9,2,0,0,2,0,1,1,2,4,0,0,0,4,2,0,0,0,2,4,0,0,1,0,5,0,2,1,5,0,0,4,0,0,2,0,0,5,2,4,0,4,7,2,1,3,1,0,3,0,0,0,2,2,1,0,0,0,1,0,6,0,0,0,1,0,1,0,0,1,0,0,1,0,1,1,1,2,0,3,0,0,0,0,0,0,0,0,5,0,4,1,0,0,0 25 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,5,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,2,1,1,0,1,0,0,2,1,0,0,0,3,0,0,1,0,0,0,3,0,0,0,0,0,0,0,0,2,0,0,0,1,2,0,0,0,0,0,1,0,0,0,0,0,0,2,0,1,1,0,0,0,0,0,1,0 45 0.941667 0 chr16 56187603 56187700 - AC007495.1, chr16 56187448 56187740 h38_mk_AluSz + 15 SRR1337098,SRR1341763,SRR1356619,SRR1368772,SRR1389979,SRR1416754,SRR1435020,SRR1435293,SRR1444678,SRR1453851,SRR1455925,SRR1471817,SRR1476571,SRR1487362,SRR662233, 53 0,0,1,0,0,1,0,1,0,1,0,1,0,0,1,0,1,1,2,0,1,1,1,0,4,1,0,0,0,0,2,0,1,0,1,1,3,1,0,2,0,1,1,0,1,0,0,0,0,0,1,0,1,0,2,0,0,2,0,3,1,1,0,0,0,1,0,1,1,0,1,2,1,1,1,3,0,0,1,0,0,0,2,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,1,0,0,0,0,1,0,1,0,2,1,0,0,0,0,1 95 1,1,0,2,0,0,0,2,0,8,8,0,1,1,3,2,4,1,0,3,3,0,8,0,2,0,2,1,3,0,3,1,2,5,0,3,4,6,1,0,5,1,6,6,1,2,3,1,1,1,0,7,2,2,2,2,2,1,1,3,3,1,4,5,2,0,3,6,1,2,5,3,5,5,3,4,5,2,1,4,2,4,2,4,2,1,0,1,1,5,2,1,1,1,3,2,3,2,1,6,2,1,0,0,8,0,2,0,1,1,3,5,0,6,1,2,0 . . . chr16 57174169 57174286 - FAM192A, chr16 57174004 57174317 h38_mk_AluS + 66 SRR1072367,SRR1084842,SRR1085495,SRR1102055,SRR1317344,SRR1318163,SRR1328895,SRR1331579,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1367943,SRR1375571,SRR1386708,SRR1387809,SRR1390601,SRR1408208,SRR1408368,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1471817,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR661349,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 116 21,13,12,23,16,10,13,22,21,12,15,8,11,11,16,12,11,16,4,6,13,8,42,12,16,15,22,20,17,10,7,18,3,18,7,8,24,10,7,25,15,27,6,18,7,9,25,11,15,12,11,11,3,16,9,8,17,19,20,24,9,22,6,26,12,7,4,7,14,13,17,14,30,23,4,12,18,11,11,17,12,22,6,31,16,16,9,7,11,6,12,3,21,22,16,24,18,5,11,24,1,20,12,0,5,12,4,5,15,14,24,15,7,26,29,27,6 106 13,2,2,11,9,2,6,1,1,2,7,4,0,2,3,3,4,3,1,2,3,3,13,3,2,1,6,9,3,4,3,6,2,7,1,5,3,3,0,4,3,8,2,7,2,0,8,5,1,5,7,4,3,4,2,4,3,3,3,17,7,3,1,6,5,2,0,3,2,6,4,5,15,11,0,8,2,2,4,5,8,2,0,11,4,4,0,2,6,1,6,0,6,5,2,6,9,1,9,6,0,3,6,0,1,3,2,4,5,1,9,5,0,6,6,10,1 118 0.708673 1 chr16 57641587 57641708 + ADGRG1, chr16 57641556 57641874 h38_mk_AluSz6 - 1 SRR1331579, 110 8,3,17,1,2,9,3,13,4,13,7,4,7,5,11,1,59,3,6,5,3,8,22,2,1,3,8,0,1,12,5,2,4,4,4,2,2,5,4,0,5,4,6,10,6,6,3,7,16,5,0,1,9,4,8,7,7,2,9,5,8,1,1,4,6,7,11,4,1,6,5,4,4,9,5,7,28,2,8,1,1,1,7,10,10,10,24,4,20,3,6,1,2,3,13,3,9,1,34,11,2,23,2,0,13,11,0,6,1,5,1,9,0,0,4,5,7 117 54,4,227,46,47,81,39,197,68,91,34,47,121,91,96,26,398,31,48,41,42,73,253,19,63,27,59,15,26,134,68,24,78,21,50,22,53,69,48,39,95,44,33,61,48,63,37,44,125,32,27,26,43,96,110,30,69,30,104,66,94,11,23,61,93,64,137,59,39,31,50,42,33,126,123,117,161,31,37,20,31,54,108,88,121,71,195,46,180,85,52,22,47,75,64,38,80,77,251,129,22,86,48,4,126,76,39,64,37,65,28,88,21,34,80,27,53 118 0.771159 1 chr16 57641591 57641708 + ADGRG1, chr16 57641556 57641874 h38_mk_AluSz6 - 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 65,10,164,50,41,53,31,125,44,62,29,22,81,56,85,29,254,28,44,30,26,47,215,12,49,24,56,14,20,87,49,25,68,19,22,27,34,61,36,33,69,23,20,52,40,42,30,26,80,29,19,17,31,55,70,26,46,21,63,49,64,10,20,41,67,58,85,40,31,19,37,27,15,67,70,66,102,17,33,19,16,57,69,62,70,43,140,33,154,66,33,19,24,53,48,28,63,57,201,112,16,84,30,0,105,40,28,45,33,33,20,62,11,33,51,21,41 117 54,4,227,46,47,81,39,197,68,91,34,47,121,91,96,26,398,31,48,41,42,73,253,19,63,27,59,15,26,134,68,24,78,21,50,22,53,69,48,39,95,44,33,61,48,63,37,44,125,32,27,26,43,96,110,30,69,30,104,66,94,11,23,61,93,64,137,59,39,31,50,42,33,126,123,117,161,31,37,20,31,54,108,88,121,71,195,46,180,85,52,22,47,75,64,38,80,77,251,129,22,86,48,4,126,76,39,64,37,65,28,88,21,34,80,27,53 118 0.970121 1 chr16 57790930 57791066 - KIFC3, chr16 57790943 57791256 h38_mk_AluSx + 6 SRR1348159,SRR1435293,SRR1444678,SRR1464373,SRR604456,SRR818210, 60 2,4,0,0,0,1,0,0,0,1,1,2,0,1,0,0,0,0,0,0,2,0,5,1,0,0,4,1,0,0,1,1,1,0,3,0,2,4,0,0,1,0,0,3,0,3,2,1,2,0,0,4,1,1,3,0,0,0,1,2,2,0,1,0,0,0,2,1,0,0,1,0,5,2,3,2,1,1,0,3,0,5,0,0,2,0,2,0,1,0,2,0,1,2,0,1,3,1,2,2,0,3,0,0,0,1,0,0,0,4,0,0,0,4,3,4,0 21 0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,2,0,7,0,0,0,2,0,0,0,0,3,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,2,2,0,1,0,4,0,0,3,0,0,0,0,0,0,0,2,0,0,4,0,0,0,0,3,0,0,0,3,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0 117 0.050780 0 chr16 58395102 58395218 + GINS3, chr16 58395067 58395266 h38_mk_AluJb - 5 SRR1102055,SRR1340508,SRR1440986,SRR602516,SRR818033, 30 0,0,0,0,1,0,2,0,0,1,1,1,0,1,0,2,0,0,0,0,0,0,2,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,2,0,1,0,1,0,0,0,0,0,0,1,2,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,1,1,0,1,0,0,2,0,0,0,0,0,0,2,0,0,0,2,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0 31 0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,1,0,2,0,1,0,0,1,1,0,1,1,0,1,0,0,1,1,0,0,1,0,1,0,0,2,0,0,2,1,1,0,0,0,0,0,0,2,0,0,0,1,0,0,1,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,5,0,0 92 0.367987 0 chr16 58527923 58528105 - CNOT1, chr16 58527824 58528135 h38_mk_AluSz + 7 SRR1348360,SRR1433796,SRR1454803,SRR1487685,SRR1498550,SRR602516,SRR604262, 72 1,0,1,2,3,2,1,1,2,1,0,1,0,0,0,1,2,1,0,0,0,0,2,0,3,1,3,2,1,1,1,1,0,4,0,0,1,2,0,0,0,3,2,1,1,3,1,0,0,0,0,0,0,0,1,3,0,9,0,0,1,2,0,1,2,0,0,0,0,0,1,3,1,3,1,1,2,0,0,1,0,1,2,1,1,1,1,0,5,0,3,0,1,2,0,2,0,4,3,5,1,3,1,8,1,2,2,1,0,0,0,2,3,1,4,0,0 50 0,0,1,0,3,1,1,1,0,0,1,0,0,1,0,2,1,0,0,2,0,1,2,0,1,0,1,2,2,0,1,1,0,1,0,0,0,0,0,2,0,2,0,1,2,1,1,0,1,0,0,1,0,0,1,0,1,7,0,0,2,0,0,0,0,0,0,0,1,1,1,3,1,3,3,0,0,0,0,0,0,0,0,3,0,2,2,0,11,0,1,0,0,0,0,2,0,3,0,1,0,2,0,0,0,0,0,0,1,0,1,0,0,0,1,0,0 118 0.027399 1 chr16 66805504 66805628 - NAE1, chr16 66805431 66805669 h38_mk_AluJ + 1 SRR1454803, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 23 0,0,0,0,0,3,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,2,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,3,0,6,0,0,0,4,0,0,0,0,5,1,0,0,0,0,0,0,2,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,2,2,0,0,1,0,0,0 118 0.003589 1 chr16 67835538 67835658 - CENPT, chr16 67835374 67835695 h38_mk_AluSz + 9 SRR1356619,SRR1416477,SRR1440986,SRR1474777,SRR1487194,SRR601500,SRR604456,SRR662233,SRR818210, 101 2,0,6,7,3,6,5,3,3,4,3,4,2,3,1,2,3,7,1,1,5,1,6,6,4,0,10,11,6,1,2,6,0,4,3,1,0,5,0,5,3,3,2,1,4,1,3,0,5,3,0,4,0,3,3,2,4,4,4,2,1,1,2,3,5,2,1,2,1,9,2,3,8,2,0,4,3,3,0,6,3,4,2,3,3,2,0,0,2,1,3,0,3,8,4,6,11,4,2,7,0,3,3,0,7,16,4,8,2,1,15,2,0,2,7,8,1 15 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0 . . . chr16 67940654 67940831 - LCAT, chr16 67940707 67941028 h38_mk_AluJ4 + 16 SRR1084649,SRR1337412,SRR1356444,SRR1408208,SRR1413562,SRR1418837,SRR1453851,SRR1454803,SRR1464373,SRR1474777,SRR1487362,SRR1487685,SRR607337,SRR662233,SRR662534,SRR814967, 26 2,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,3,1,0,0,0,1,0,0,2,0,3,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,3,1,1,0,1,0,0,0,1,0,0,0,3,3,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,3,2,0,1,0,0,0 78 6,6,1,0,0,4,0,0,1,10,0,0,4,0,2,0,5,1,0,5,3,12,3,1,4,0,3,1,0,7,4,2,2,1,0,1,2,0,0,5,2,7,0,2,0,2,4,2,5,2,2,0,0,6,7,0,5,3,0,4,6,1,3,3,0,2,5,0,7,1,2,5,4,2,1,2,4,0,0,0,2,4,0,3,3,1,5,4,8,3,0,2,0,1,0,0,4,3,2,2,0,0,0,0,3,0,0,8,1,0,1,4,3,1,2,0,0 118 0.135204 1 chr16 68273795 68273904 + SLC7A6, chr16 68273766 68274069 h38_mk_AluSc5 - 2 SRR1375571,SRR1387809, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0 89 2,0,1,6,3,3,7,1,2,0,5,2,1,1,5,4,9,2,2,0,8,0,9,0,2,4,2,1,5,2,3,7,2,4,3,4,4,3,1,1,3,4,1,6,2,3,4,0,1,2,1,1,0,2,2,0,5,1,1,1,0,2,0,4,0,0,0,0,1,0,2,0,11,0,1,4,10,5,0,6,1,3,0,4,4,3,0,0,1,0,3,1,3,4,7,4,15,0,1,2,0,6,2,0,5,1,0,0,5,8,9,8,0,5,4,13,2 107 0.504594 0 chr16 68273818 68273904 + SLC7A6, chr16 68273766 68274069 h38_mk_AluSc5 - 57 SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1418127,SRR1432123,SRR1434526,SRR1439873,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 79 0,0,10,5,0,2,4,3,2,2,3,0,1,1,3,2,4,1,0,0,4,0,4,1,3,2,5,1,5,3,0,4,0,2,0,2,4,0,1,1,2,1,2,6,3,4,1,0,0,1,0,1,1,2,2,3,3,1,2,5,0,0,0,6,2,2,0,0,0,1,2,0,7,0,0,3,8,0,0,4,0,2,0,2,5,4,0,0,0,0,2,0,2,2,2,5,10,0,0,4,0,4,0,0,1,4,1,2,1,8,8,6,0,8,5,8,6 89 2,0,1,6,3,3,7,1,2,0,5,2,1,1,5,4,9,2,2,0,8,0,9,0,2,4,2,1,5,2,3,7,2,4,3,4,4,3,1,1,3,4,1,6,2,3,4,0,1,2,1,1,0,2,2,0,5,1,1,1,0,2,0,4,0,0,0,0,1,0,2,0,11,0,1,4,10,5,0,6,1,3,0,4,4,3,0,0,1,0,3,1,3,4,7,4,15,0,1,2,0,6,2,0,5,1,0,0,5,8,9,8,0,5,4,13,2 108 0.622004 0 chr16 68312042 68312176 + PRMT7, chr16 68312005 68312190 h38_mk_AluJb - 112 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 115 12,3,8,30,9,23,27,12,10,14,18,16,6,12,28,9,17,20,4,12,24,9,41,24,23,10,20,4,18,13,18,14,3,11,10,8,14,8,4,15,7,22,19,25,19,18,19,9,9,13,6,27,4,5,13,12,32,5,19,18,12,12,4,20,27,10,5,4,14,20,19,9,24,15,7,30,30,18,4,18,21,16,6,16,18,16,9,11,12,14,23,0,22,16,15,14,50,4,10,22,0,6,13,1,31,45,3,8,19,41,40,22,3,50,18,52,5 114 13,1,8,47,13,32,46,16,25,17,24,16,14,19,46,21,26,24,6,8,30,15,58,27,25,16,44,12,26,19,25,17,7,22,21,13,17,12,10,23,13,17,28,33,19,15,43,12,18,17,10,36,8,9,10,18,37,4,20,26,12,11,19,30,43,17,7,8,26,13,23,15,46,17,9,36,47,21,12,30,15,26,10,26,25,14,14,8,10,17,37,0,18,28,23,26,65,9,14,18,2,21,21,0,21,45,0,11,47,39,62,33,10,65,35,66,8 115 0.968997 0 chr16 70317256 70317373 - AC012184.3, chr16 70317222 70317409 h38_mk_AluSz + 2 SRR1415234,SRR1474777, 58 1,1,0,1,0,0,1,1,1,5,0,4,0,0,2,1,0,0,0,0,1,3,2,2,1,0,2,0,0,0,1,2,1,0,0,0,1,1,2,0,2,2,0,1,1,0,1,0,1,1,3,0,1,0,0,0,1,1,1,0,0,0,0,2,0,1,1,1,2,7,0,1,0,1,3,1,1,0,1,0,0,3,0,0,0,0,1,0,7,2,0,0,1,0,0,0,3,1,2,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,2,2,0 41 0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,1,0,0,1,2,0,0,2,0,0,0,1,3,0,0,1,0,0,2,1,3,0,4,0,2,0,0,1,0,0,1,1,0,0,1,1,0,0,1,0,1,1,0,0,0,0,0,0,1,3,0,0,1,1,1,1,0,0,0,6,0,0,2,0,0,1,1,0,1,0,1,0,0,0,0,0,0,0,1,0,1,0,1,2,0,0,0,0,1,1,0,0,0,1,0,0,0,0 . . . chr16 70768846 70768943 + VAC14-AS1, chr16 70768793 70769124 h38_mk_AluSx - 32 SRR1316940,SRR1320963,SRR1326179,SRR1331579,SRR1336548,SRR1348360,SRR1356619,SRR1387264,SRR1399779,SRR1413562,SRR1418837,SRR1435293,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1476571,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR601500,SRR602314,SRR604262,SRR604456,SRR613627,SRR657635,SRR657777, 115 3,5,9,5,10,5,3,3,11,40,7,8,15,16,13,1,14,9,0,16,6,14,18,2,12,4,9,11,3,41,13,2,15,7,7,7,8,11,14,8,18,18,6,9,13,9,6,24,31,6,7,8,9,12,18,5,3,3,6,12,30,2,9,12,23,13,21,12,8,4,8,5,6,17,23,18,4,8,13,3,4,16,29,22,7,9,14,12,37,17,8,1,7,6,7,12,7,16,7,9,3,5,3,0,30,15,4,11,10,6,6,8,13,5,6,4,3 47 1,1,0,1,0,0,1,0,0,1,0,1,0,1,2,0,1,2,0,1,0,0,0,0,0,0,0,2,0,1,2,0,0,0,0,0,0,0,1,0,1,0,0,0,2,0,0,1,2,1,0,0,1,0,1,0,0,0,0,0,2,0,0,0,1,1,2,2,2,0,0,1,0,1,1,2,0,0,0,0,0,2,4,0,0,1,1,1,1,2,0,0,0,2,1,0,0,1,2,0,0,1,0,0,4,0,3,3,0,0,0,0,0,0,0,0,0 . . . chr1 67131142 67131227 - C1orf141, chr1 67131110 67131444 h38_mk_AluSz + 4 SRR1326179,SRR1387809,SRR662534,SRR663633, 82 1,1,1,2,0,4,1,0,4,3,0,0,3,3,5,0,1,0,2,1,0,3,5,0,2,1,1,0,1,0,1,1,1,0,0,2,3,2,2,0,2,3,2,1,2,6,1,2,2,1,0,0,1,1,3,0,1,0,0,1,1,0,1,1,4,1,1,1,2,1,1,0,2,0,3,0,5,0,2,1,1,0,0,5,2,0,1,0,4,3,2,1,0,1,0,1,2,1,4,3,1,1,3,0,2,7,0,0,0,0,0,4,2,2,2,1,5 65 0,0,2,2,0,2,0,0,0,1,0,0,1,1,3,0,0,3,1,0,0,1,1,1,1,1,1,0,0,0,0,1,1,1,1,0,1,0,0,0,1,4,1,0,0,2,2,1,1,1,1,1,1,0,3,1,1,0,0,0,1,0,0,0,1,0,1,0,0,1,1,1,1,1,0,0,1,1,1,1,0,3,1,1,1,0,0,0,1,0,1,1,0,0,0,1,0,0,0,1,1,1,2,0,0,2,1,0,0,0,0,3,2,1,1,2,0 . . . chr16 71894721 71894858 + ATXN1L,IST1, chr16 71894549 71894816 h38_mk_AluJb - 19 SRR1072367,SRR1356444,SRR1368772,SRR1468955,SRR1498550,SRR613627,SRR1084842,SRR1085495,SRR1317344,SRR1318163,SRR1333741,SRR1348159,SRR1354446,SRR1399779,SRR1432123,SRR1455925,SRR1468514,SRR657635,SRR818033, 43 4,0,0,3,5,0,0,0,0,0,1,5,2,0,1,0,4,2,0,2,0,0,1,0,0,0,2,0,1,2,0,1,2,0,1,0,3,0,0,0,0,2,1,1,2,0,1,1,0,1,0,0,3,0,0,0,1,1,0,0,2,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,5,6,0,0,0,0,1,0,0,0,0,0,4,0,1,0,0,1,1,0,0,0,0,0,1,5,0,0,1,0,0,0,0,0,0,0,0,1,5,0,0 108 3,9,3,3,5,8,9,2,3,7,3,2,2,6,1,4,2,9,0,0,2,2,7,5,1,2,6,2,2,2,7,1,2,5,2,5,4,3,3,8,5,2,7,7,9,3,6,4,3,4,7,5,4,1,6,4,3,6,3,4,0,2,2,4,5,1,4,0,2,2,1,2,4,0,2,4,3,3,2,5,5,3,4,5,6,4,1,1,3,0,7,1,3,4,2,5,3,1,6,4,2,4,1,0,5,12,1,2,8,3,6,11,0,9,10,3,0 . . . chr1 67387115 67387207 + IL12RB2, chr1 67386929 67387239 h38_mk_AluSq2 - 2 SRR814967,SRR818210, 12 0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,1,1,0 24 0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,2,0,0,1,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,4,0,0,0,1,0,2,0 87 0.098954 0 chr16 74299572 74299745 + PSMD7, chr16 74299379 74299703 h38_mk_AluJb - 1 SRR1413562, 9 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 63 0,20,1,3,0,0,5,3,1,0,0,0,0,0,6,0,0,2,0,1,0,1,5,0,0,2,1,0,4,3,0,2,4,0,1,2,0,0,1,0,0,3,1,1,7,4,1,2,5,2,6,0,2,0,0,0,5,2,0,0,2,10,0,2,4,0,1,0,1,0,1,0,0,4,0,0,5,3,0,3,0,4,0,0,1,7,0,3,0,1,0,1,0,2,0,0,2,0,1,2,0,0,0,0,4,3,0,0,2,1,2,0,2,1,10,1,0 . . . chr16 74664624 74664745 - RFWD3, chr16 74664459 74664784 h38_mk_AluSx3 + 3 SRR1326179,SRR602704,SRR818210, 43 1,0,0,0,1,0,1,3,0,0,1,1,0,0,3,2,3,0,1,0,0,0,3,1,2,1,2,0,0,0,1,1,0,1,0,0,1,2,0,0,2,1,0,2,0,0,0,1,2,0,1,1,0,0,1,0,1,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,1,0,0,1,2,0,0,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,1,0,1,0 54 1,0,1,3,1,2,0,2,2,1,1,2,0,0,2,0,0,0,0,0,2,0,1,1,0,0,1,1,1,0,0,1,0,1,1,2,1,1,0,0,2,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,4,1,1,1,1,0,0,0,1,1,1,0,2,1,0,0,1,0,0,0,3,0,0,0,0,0,0,1,0,0,2,2,2,3,1,1,0,0,2,2,0,2,1,0,0,0,0,0,0,0,1,0,5,1 77 0.760658 0 chr16 74959350 74959592 - WDR59, chr16 74959474 74959799 h38_mk_AluJ + 1 SRR602516, 23 0,1,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,1,0,0,0,1,0,0,0,1,1,0,0,0,0,1,0,0,0,0,1,1,0,0,0,1,0,0,0,0,3,0,1,0,0,0,0,0,0,1,0,3,0,0,1,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.022394 0 chr16 75159082 75159174 + ZFP1, chr16 75158883 75159205 h38_mk_AluJb - 1 SRR1084842, 7 0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 4 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 0.014360 0 chr16 80980770 80980879 - CMC2, chr16 80980598 80980923 h38_mk_AluJ + 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 112,82,134,161,120,95,109,189,193,125,120,91,110,80,133,107,109,112,64,60,120,93,400,97,115,67,145,120,124,123,114,209,80,174,71,127,171,138,47,238,145,167,93,112,131,142,175,89,108,109,127,115,78,126,93,113,187,157,97,174,141,142,190,151,181,76,66,69,141,121,143,121,168,84,63,113,161,153,93,118,91,162,90,134,173,212,96,54,101,106,113,15,126,104,101,119,125,123,75,129,8,116,51,262,206,190,91,150,145,188,212,158,61,163,239,185,49 117 98,78,93,135,125,99,137,156,189,103,115,88,98,93,120,106,86,131,53,53,110,100,456,106,142,83,164,97,132,84,121,200,53,164,60,130,209,116,39,210,121,141,87,125,120,132,195,92,82,150,133,131,61,87,72,92,168,146,91,160,132,143,121,173,143,77,55,87,117,125,112,119,158,89,54,92,140,137,98,136,89,188,72,141,147,158,74,46,83,71,109,22,105,115,86,154,103,95,78,128,5,78,58,164,242,178,78,122,144,178,238,174,71,187,222,213,58 118 0.964383 1 chr16 83803435 83803528 - AC009119.1, chr16 83803264 83803575 h38_mk_AluJb + 1 SRR1337098, 27 1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,4,1,2,0,0,0,0,1,1,1,0,0,0,0,0,0,0,0,3,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,3,4,0,0,0,0,1,4,1,0,0,0,0,5,0,0,1,0,0,1,0,0,1,0,0,0,0,0,1,4,0,7 12 2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr16 83803435 83803715 - AC009119.1, chr16 83803264 83803575 h38_mk_AluJb + 1 SRR1335446, 27 1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,4,1,2,0,0,0,0,1,1,1,0,0,0,0,0,0,0,0,3,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,3,4,0,0,0,0,1,4,1,0,0,0,0,5,0,0,1,0,0,1,0,0,1,0,0,0,0,0,1,4,0,7 8 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,3,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr16 84502721 84502862 - TLDC1, chr16 84502608 84502897 h38_mk_AluSz + 33 SRR1072367,SRR1099499,SRR1317344,SRR1328895,SRR1333741,SRR1340508,SRR1341763,SRR1342045,SRR1356619,SRR1357478,SRR1360128,SRR1367943,SRR1368772,SRR1375571,SRR1390601,SRR1402900,SRR1414897,SRR1418837,SRR1434526,SRR1435020,SRR1440986,SRR1444678,SRR1455925,SRR1464373,SRR1471943,SRR1474777,SRR1487194,SRR602314,SRR602704,SRR604456,SRR662534,SRR814967,SRR818210, 105 2,2,3,6,5,3,0,3,1,1,6,2,5,5,9,3,9,6,1,0,8,0,20,1,2,6,8,2,5,2,4,3,2,5,2,4,6,3,2,2,1,3,5,3,7,5,8,0,2,1,1,3,3,0,2,1,4,3,5,2,0,4,3,7,4,1,1,3,4,3,5,2,4,2,2,7,10,2,4,2,2,6,2,7,9,11,5,0,4,2,6,0,3,4,2,1,5,3,4,5,1,2,1,0,5,6,1,0,10,1,19,9,0,9,0,9,6 52 1,0,0,0,0,1,1,0,0,0,1,1,1,0,2,2,0,3,1,0,0,0,4,0,1,2,0,0,0,0,2,1,2,1,0,2,2,4,0,1,0,0,0,1,0,2,1,0,0,2,1,0,0,0,1,0,1,0,1,2,0,0,0,0,2,0,1,1,0,1,0,0,2,0,0,3,0,0,0,2,1,1,0,0,3,0,0,0,1,0,0,0,0,0,1,0,3,0,1,0,1,0,0,0,0,2,0,0,3,1,1,1,0,3,0,3,0 113 0.574442 0 chr16 88660520 88660637 - MVD, chr16 88660362 88660682 h38_mk_AluSz6 + 14 SRR1340508,SRR1368772,SRR1387809,SRR1399779,SRR1408208,SRR1418127,SRR1432123,SRR1434526,SRR1437538,SRR1444622,SRR595926,SRR602704,SRR658307,SRR814967, 117 24,9,24,95,21,27,44,56,54,26,59,22,38,44,40,28,37,52,7,8,35,13,157,45,48,33,47,33,48,17,35,67,12,67,31,29,37,26,8,79,45,59,37,98,57,41,86,17,43,57,25,45,34,44,42,29,75,13,48,49,17,44,31,46,85,34,14,8,33,34,49,51,80,43,13,36,63,53,24,53,41,46,11,53,31,28,26,17,24,27,54,5,35,37,20,44,55,20,13,33,3,31,25,29,53,40,6,45,50,59,111,77,15,102,65,71,10 48 1,1,0,2,0,0,1,3,1,0,0,0,0,1,1,0,0,0,0,0,1,2,10,0,1,1,0,0,0,0,0,1,0,1,0,1,5,1,0,0,0,3,0,1,3,0,2,0,0,3,0,0,0,2,0,0,6,0,2,2,0,1,3,0,1,0,2,0,0,0,0,0,3,0,0,0,1,1,0,0,1,0,0,2,1,0,3,1,0,0,3,0,0,2,0,0,3,2,0,1,0,0,0,0,0,0,0,4,0,0,2,1,0,6,0,0,0 118 0.504294 1 chr16 89545872 89545995 + SPG7, chr16 89545826 89546092 h38_mk_AluJ - 1 SRR1326179, 27 0,0,0,0,1,5,0,0,0,2,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,4,1,3,0,1,0,0,0,4,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,2,0,0,3,0,0,6,0,0,0,0,0,0,3,0,4,0,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,1,0,0,4,0,0,2,0,4,4,1,3,4,0,0 27 0,0,0,0,0,3,0,0,1,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,2,0,0,0,1,3,0,0,0,0,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,1,3,0,0,0,2,1,0,0,0,1,0,3,0,4,0,0,0,0,0,0,0,0,0,7,0,1,1,0,2,1,0,0,4,0,0,0 118 0.009619 1 chr16 89545872 89546030 + SPG7, chr16 89545826 89546092 h38_mk_AluJ - 1 SRR1418837, 27 0,0,0,0,1,5,0,0,0,2,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,4,1,3,0,1,0,0,0,4,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,2,0,0,3,0,0,6,0,0,0,0,0,0,3,0,4,0,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,1,0,0,4,0,0,2,0,4,4,1,3,4,0,0 19 0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,3,0,0,3,0,0,0,2,3,0,0,4,0,0,0,0,0,2,2,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.009190 1 chr16 89687449 89687815 + CDK10, chr16 89687550 89687736 h38_mk_AluJb - 3 SRR1381673,SRR1413562,SRR1476571, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 7,1,10,16,6,7,8,12,9,10,7,8,5,4,10,3,9,9,3,2,4,8,13,5,4,3,8,6,5,6,11,5,4,11,4,6,2,7,7,14,2,6,2,1,9,3,14,3,10,9,2,3,1,10,5,3,10,7,3,8,1,0,4,7,15,2,3,6,7,8,8,12,12,7,2,8,9,6,3,4,5,3,2,25,6,7,4,2,6,3,6,0,6,13,7,14,6,2,9,7,1,10,4,7,8,17,4,9,2,10,12,10,4,11,10,7,10 . . . chr17 11995558 11995679 - ZNF18, chr17 11995391 11995709 h38_mk_AluSx + 11 SRR1317344,SRR1340508,SRR1341365,SRR1390601,SRR1414897,SRR1421177,SRR1468955,SRR1471943,SRR1487362,SRR601500,SRR661973, 71 3,0,0,1,1,1,0,0,1,5,5,0,0,2,2,1,0,1,0,0,2,4,1,2,1,1,3,0,1,2,0,0,1,0,0,0,1,2,1,0,0,1,0,1,1,2,0,0,2,1,1,2,0,1,1,3,3,2,1,0,0,0,0,0,2,1,2,0,0,1,3,2,2,0,0,1,1,4,0,4,3,1,1,2,3,1,0,1,0,1,2,0,2,2,2,0,0,0,2,2,0,1,1,0,0,2,5,0,3,6,0,1,0,0,0,3,0 30 1,0,1,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,2,1,1,0,0,0,2,1,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,4,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,1,0,2,0,1,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,1,1,0,0,3,0,0,0,0,0,0,3,0,3,0,2,0,0,0 85 0.811699 0 chr17 15503098 15503232 - CDRT4,TVP23C,TVP23C-CDRT4, chr17 15503111 15503424 h38_mk_AluJo + 44 SRR1471817,SRR1433796,SRR1072367,SRR1084649,SRR1084842,SRR1316940,SRR1318163,SRR1326179,SRR1328895,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1360563,SRR1375571,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1408208,SRR1413562,SRR1415234,SRR1418127,SRR1434526,SRR1435020,SRR1440986,SRR1453851,SRR1457482,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487685,SRR601500,SRR602314,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818210, 98 6,0,6,11,7,12,8,5,2,2,7,11,0,9,6,7,6,14,2,0,3,3,12,6,15,0,15,7,13,6,6,6,2,8,3,0,2,3,2,15,2,13,2,8,9,9,10,3,3,0,8,11,5,4,7,7,18,7,5,12,0,9,0,1,10,8,2,0,8,10,4,0,9,8,0,2,16,4,3,5,6,7,3,11,9,13,6,2,0,0,15,0,11,9,8,6,14,0,0,10,0,6,10,0,9,25,0,3,8,22,10,10,6,22,7,9,6 59 2,0,1,3,0,2,0,0,0,3,0,4,2,0,7,2,2,0,1,0,1,0,8,3,1,0,0,0,0,0,0,0,0,1,2,0,0,1,0,1,0,3,5,3,0,0,2,0,1,0,1,0,0,2,0,0,0,1,1,1,2,0,0,2,4,0,0,0,0,0,2,1,0,3,1,0,1,0,1,1,1,0,0,1,1,1,3,0,1,1,0,0,0,2,4,0,0,0,2,0,0,0,1,0,0,1,0,4,6,2,3,7,1,3,0,2,0 102 0.895664 0 chr17 16198601 16198719 - NCOR1, chr17 16198434 16198750 h38_mk_AluSp + 57 SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1337098,SRR1337412,SRR1340508,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1367943,SRR1368772,SRR1386708,SRR1387264,SRR1390601,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1418837,SRR1432123,SRR1434526,SRR1435293,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457503,SRR1464373,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR661349,SRR662233,SRR662534,SRR814967,SRR818210, 100 4,2,1,5,8,3,6,3,2,3,4,3,0,2,6,6,9,4,1,1,5,4,7,0,4,2,4,0,3,1,1,0,3,7,0,3,1,6,1,3,4,0,1,6,0,0,1,2,3,4,3,3,1,2,5,2,5,6,2,9,3,0,1,5,1,1,1,2,1,1,3,1,4,1,1,3,1,0,0,4,2,2,0,5,5,6,2,0,7,3,0,1,2,7,4,4,7,3,2,3,1,1,0,0,1,2,1,0,3,7,4,5,2,5,4,8,2 87 3,2,0,4,2,3,11,0,0,3,12,1,1,3,4,0,4,0,0,0,4,3,14,0,0,2,5,1,3,1,3,2,1,1,1,3,1,0,1,2,3,1,0,4,1,4,5,0,2,2,0,2,0,1,2,1,4,0,4,2,2,0,2,1,2,0,3,4,2,0,2,4,4,1,2,3,3,1,0,0,0,0,0,8,4,3,4,0,4,2,2,0,1,2,2,7,7,1,2,2,0,3,0,0,1,1,1,1,7,1,10,6,0,4,2,3,0 116 0.524255 0 chr17 16786948 16787122 + AC098850.4,CCDC144A,USP32P1, chr17 16786918 16786992 h38_mk_AluYh3 - 25 SRR1072367,SRR1102055,SRR1314163,SRR1316940,SRR1341365,SRR1348159,SRR1361567,SRR1367943,SRR1402900,SRR1444622,SRR1455925,SRR1474553,SRR1498550,SRR1500868,SRR814967,SRR1337098,SRR661973,SRR1333741,SRR1354446,SRR1390601,SRR1416477,SRR601500,SRR602704,SRR657754,SRR662233, 56 3,1,0,6,0,0,7,3,1,2,3,1,0,0,0,0,0,4,0,0,6,0,0,2,0,0,5,2,1,0,5,0,0,2,3,2,0,1,0,0,0,0,0,7,1,5,7,0,0,0,0,7,1,0,0,0,0,0,1,0,1,1,0,0,0,0,1,0,0,3,0,5,2,0,0,1,3,1,0,0,2,0,0,3,4,0,0,0,1,2,1,0,1,2,0,8,2,0,0,2,0,0,0,0,2,6,0,1,5,11,5,6,0,6,0,2,0 115 19,3,4,39,23,14,52,16,14,26,23,9,23,7,21,12,1,35,26,4,46,12,17,10,17,3,36,9,13,25,25,15,6,28,11,12,9,6,12,10,11,28,13,33,22,41,73,6,6,5,22,34,22,28,10,14,24,9,34,11,6,4,4,19,13,5,12,3,41,22,7,7,50,16,1,35,42,12,2,22,29,5,7,26,15,26,8,4,17,16,29,6,40,17,5,14,22,3,0,17,0,51,12,28,18,44,6,10,15,69,53,53,9,52,14,11,37 112 0.309458 0 chr17 17973665 17973753 + DRC3, chr17 17973646 17973783 h38_mk_AluJo - 18 SRR1314163,SRR1317344,SRR1326179,SRR1331579,SRR1340508,SRR1356619,SRR1386708,SRR1418127,SRR1421177,SRR1434526,SRR1435020,SRR1439873,SRR1468514,SRR1485459,SRR600361,SRR613627,SRR614802,SRR662534, 49 0,0,0,1,1,0,2,4,0,1,3,0,0,1,4,1,1,0,0,0,0,0,4,1,1,0,1,1,0,1,1,1,0,0,0,0,0,1,0,1,0,0,0,2,1,0,3,0,0,0,0,1,0,1,0,2,0,1,2,2,2,0,0,2,0,1,0,0,0,0,0,3,1,0,0,0,1,1,0,2,0,0,1,3,3,0,0,1,0,0,0,0,3,0,0,0,0,0,2,0,0,3,2,0,0,0,0,1,0,0,0,2,0,0,1,1,0 62 1,0,0,0,0,0,1,4,0,0,2,1,1,1,1,1,2,0,0,1,0,0,6,1,0,0,3,0,1,0,3,0,0,3,0,0,0,2,0,2,1,1,1,2,0,0,1,1,1,0,1,0,0,3,0,1,1,0,2,2,2,0,0,1,0,1,2,0,1,0,2,1,1,0,0,2,2,0,0,1,2,1,1,1,0,1,0,0,1,1,4,1,1,1,2,5,4,0,0,0,0,4,4,0,0,0,0,0,0,0,0,2,0,2,1,0,0 104 0.557017 0 chr17 17973665 17973962 + DRC3, chr17 17973646 17973783 h38_mk_AluJo - 1 SRR1487194, 49 0,0,0,1,1,0,2,4,0,1,3,0,0,1,4,1,1,0,0,0,0,0,4,1,1,0,1,1,0,1,1,1,0,0,0,0,0,1,0,1,0,0,0,2,1,0,3,0,0,0,0,1,0,1,0,2,0,1,2,2,2,0,0,2,0,1,0,0,0,0,0,3,1,0,0,0,1,1,0,2,0,0,1,3,3,0,0,1,0,0,0,0,3,0,0,0,0,0,2,0,0,3,2,0,0,0,0,1,0,0,0,2,0,0,1,1,0 94 3,2,2,9,4,1,4,1,3,5,2,2,1,4,3,3,3,1,1,0,2,2,16,2,2,3,2,2,3,2,7,4,0,3,0,1,2,1,0,3,1,0,0,2,5,2,7,4,0,4,0,3,2,6,3,4,5,0,3,2,0,3,0,5,7,2,1,2,2,0,6,3,0,2,1,3,2,1,0,5,4,1,2,3,4,2,5,0,4,0,7,0,0,6,7,1,5,1,2,1,0,7,1,5,1,5,0,2,3,5,0,3,0,4,0,1,2 . . . chr17 18360414 18360552 - SHMT1, chr17 18360265 18360599 h38_mk_AluJb + 38 SRR1072367,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1326179,SRR1335446,SRR1340508,SRR1356444,SRR1356619,SRR1361567,SRR1368772,SRR1381673,SRR1387264,SRR1399779,SRR1402900,SRR1413562,SRR1415234,SRR1418837,SRR1435020,SRR1435775,SRR1444678,SRR1453851,SRR1454803,SRR1455925,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR604456,SRR613627,SRR661349,SRR814967,SRR818033, 87 5,0,2,3,1,1,1,2,3,4,0,1,1,2,4,2,2,1,1,0,1,2,5,1,3,0,1,0,0,1,3,1,1,0,1,2,2,2,3,0,3,1,0,2,2,2,0,2,3,1,2,0,1,0,1,4,3,1,0,1,1,2,1,0,0,1,0,2,1,1,1,3,1,1,1,0,3,0,1,2,1,1,0,5,1,7,3,0,5,0,0,0,3,1,1,1,3,1,4,0,1,4,0,1,2,2,0,0,1,2,0,0,1,4,4,1,0 78 1,0,0,0,0,5,1,4,3,2,1,2,1,1,2,0,1,0,2,0,1,1,2,2,1,0,0,0,0,2,4,1,0,0,1,1,3,1,2,0,3,1,0,1,3,1,0,0,5,2,1,2,2,1,1,1,0,0,0,2,1,1,0,2,2,0,0,1,1,1,2,3,1,2,1,0,2,1,1,1,0,4,1,3,1,2,1,0,0,2,2,0,1,1,0,2,2,0,3,1,0,2,2,0,0,0,0,0,1,0,0,1,0,2,4,1,3 115 0.396068 0 chr17 18360414 18360556 - SHMT1, chr17 18360265 18360599 h38_mk_AluJb + 1 SRR1328895, 87 5,0,2,3,1,1,1,2,3,4,0,1,1,2,4,2,2,1,1,0,1,2,5,1,3,0,1,0,0,1,3,1,1,0,1,2,2,2,3,0,3,1,0,2,2,2,0,2,3,1,2,0,1,0,1,4,3,1,0,1,1,2,1,0,0,1,0,2,1,1,1,3,1,1,1,0,3,0,1,2,1,1,0,5,1,7,3,0,5,0,0,0,3,1,1,1,3,1,4,0,1,4,0,1,2,2,0,0,1,2,0,0,1,4,4,1,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 0.272178 0 chr17 18528573 18528747 - AC107983.2, chr17 18528703 18528777 h38_mk_AluYh3 + 13 SRR1102055,SRR1340508,SRR1356619,SRR1375571,SRR1440986,SRR1455925,SRR595926,SRR602704,SRR604456,SRR607337,SRR657754,SRR658307,SRR661973, 116 18,1,4,27,16,13,25,6,15,9,13,8,16,9,16,14,6,12,8,2,15,11,17,10,23,8,26,8,6,16,10,6,4,9,8,6,4,8,3,8,12,20,10,19,18,15,26,3,1,7,8,18,13,11,15,18,28,9,14,14,5,2,2,17,12,10,12,3,22,11,6,2,19,7,3,12,25,4,2,5,17,7,2,25,19,25,10,1,6,13,14,5,13,14,11,28,18,1,4,25,0,21,12,28,18,40,9,24,16,55,44,22,4,39,15,19,20 38 1,0,0,4,0,0,7,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,5,0,0,0,3,0,0,0,3,0,0,0,1,1,0,2,0,0,0,0,0,2,0,3,6,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,1,0,2,4,0,0,1,1,0,0,0,2,0,0,2,1,0,0,0,0,0,4,0,0,0,0,3,2,0,2,4,0,0,0,0,2,17,0,2,4,7,4,3,0,2,0,0,0 56 0.696854 0 chr17 20415505 20415679 + USP32P3, chr17 20415475 20415549 h38_mk_AluYh3 - 5 SRR1408208,SRR1454803,SRR1498550,SRR661349,SRR661973, 51 2,0,0,5,0,0,6,2,1,0,3,1,0,0,0,0,0,3,0,0,1,0,0,0,0,0,4,2,0,0,5,0,0,2,2,1,0,1,0,0,0,0,0,6,1,4,7,0,0,0,0,5,1,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,3,0,5,1,0,0,1,3,1,0,0,2,0,0,3,4,0,0,0,1,1,1,0,1,1,0,8,1,0,0,2,0,0,0,0,2,5,0,1,5,10,4,6,0,5,0,2,0 115 18,5,16,21,10,19,33,7,19,13,16,15,11,14,23,13,10,11,6,6,21,14,25,14,27,10,22,15,14,13,17,4,3,12,6,6,0,7,5,15,12,20,13,29,15,16,26,4,9,10,9,18,8,11,10,22,28,7,7,14,5,9,7,21,15,6,7,4,22,12,11,5,19,14,8,19,25,4,2,20,17,10,5,36,17,17,12,2,3,8,17,0,15,15,13,45,24,2,4,32,2,49,21,11,24,49,9,35,20,28,34,23,5,39,19,19,4 . . . chr17 28330111 28330228 - IFT20, chr17 28330075 28330265 h38_mk_AluSz + 27 SRR1072367,SRR1085495,SRR1099499,SRR1102055,SRR1318163,SRR1320115,SRR1326179,SRR1333741,SRR1340508,SRR1341365,SRR1348159,SRR1375571,SRR1386708,SRR1418837,SRR1435293,SRR1435775,SRR1444622,SRR1447693,SRR1454803,SRR1455925,SRR1471943,SRR1474777,SRR1485459,SRR600361,SRR601500,SRR602314,SRR602516, 115 9,2,3,12,9,5,2,5,4,8,12,2,4,7,7,5,5,9,5,1,7,7,13,6,10,2,12,3,5,2,6,14,2,6,7,1,3,6,2,9,4,8,5,9,5,7,10,4,1,14,4,1,3,6,2,5,8,10,8,4,5,5,1,9,7,4,2,2,7,3,3,6,8,3,6,5,11,6,2,7,6,7,10,13,5,9,5,1,2,6,9,0,2,7,12,10,8,9,4,16,0,6,1,1,13,12,1,5,5,5,15,5,2,5,11,1,4 84 3,0,1,0,2,1,2,1,2,1,1,2,1,0,6,1,1,2,1,0,0,0,9,2,3,1,4,2,1,5,1,1,0,1,0,0,0,2,1,5,0,1,0,3,1,0,1,0,2,1,1,2,0,1,4,0,1,2,1,2,6,2,0,1,1,3,1,2,6,1,2,7,3,1,1,0,0,0,1,2,1,2,2,5,2,2,0,0,0,1,0,0,4,5,1,3,1,1,0,2,1,3,0,0,2,0,4,0,0,0,3,1,3,2,9,3,0 118 0.097680 1 chr17 28349497 28349732 - POLDIP2, chr17 28349416 28349647 h38_mk_AluJ4 + 1 SRR661973, 44 0,0,0,4,0,5,0,0,0,2,0,2,0,2,0,5,0,1,0,0,0,0,16,0,0,2,0,0,5,0,0,3,0,0,4,0,0,4,0,0,0,8,3,11,0,0,5,0,0,2,0,3,0,0,4,0,4,0,0,7,0,0,0,0,0,0,0,0,3,0,3,4,6,0,2,3,0,0,0,0,2,2,1,0,7,0,3,0,0,0,2,4,0,0,0,0,8,0,0,8,0,0,0,0,1,2,0,0,0,22,7,12,1,0,0,0,4 22 0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,2,2,0,0,0,0,0,0,0,2,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,3,2,0,4,2,0,0,3,0,0,0,0,2,0,0,0,0,1,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,1,0 118 0.010798 1 chr17 28672757 28672858 + SUPT6H, chr17 28672704 28672844 h38_mk_AluSc - 2 SRR1099499,SRR614802, 49 2,0,1,0,0,2,0,0,1,0,0,1,1,1,1,1,0,0,1,1,0,1,0,0,1,0,0,1,1,2,1,0,1,0,0,0,0,2,0,0,0,2,0,0,0,1,0,0,2,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,3,0,1,1,0,2,0,0,2,1,0,2,1,0,0,0,0,1,0,1,0,2,1,1,1,2,2,0,0,0,1,0,0,0,1,1,0,0,2,0,0,0,0,0,0,0,0,2,0,1,1,1,0 57 0,0,0,1,0,2,0,0,0,2,0,1,1,1,2,0,0,1,5,1,0,1,0,6,0,2,0,0,1,0,0,0,0,2,0,1,0,1,0,1,3,2,0,0,0,3,0,2,1,0,1,0,2,0,0,0,0,0,0,1,0,1,0,1,1,0,1,2,2,2,1,0,0,2,1,1,1,0,1,0,0,0,0,0,3,0,3,0,0,2,0,0,0,1,1,0,2,0,2,1,0,0,2,0,0,1,1,0,0,3,5,2,0,1,2,2,3 116 0.072933 0 chr17 28944503 28944569 - PHF12, chr17 28944537 28944680 h38_mk_AluSx3 + 4 SRR1331579,SRR1337098,SRR1487194,SRR818210, 70 0,0,0,1,0,1,2,2,0,2,4,1,0,0,2,1,3,0,1,0,2,0,7,1,2,1,2,0,0,0,1,0,0,1,0,4,0,1,0,3,0,2,1,1,1,0,2,2,1,0,1,2,0,1,1,0,2,1,1,2,1,0,0,1,1,2,0,0,0,1,0,1,4,0,0,0,1,1,1,3,2,0,0,3,2,0,1,2,4,0,2,0,1,2,1,1,2,2,0,1,0,3,0,0,2,1,0,0,0,0,6,1,0,1,1,2,0 10 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 118 0.061563 1 chr17 30073083 30073198 + EFCAB5, chr17 30073048 30073366 h38_mk_AluJ - 4 SRR1340508,SRR1468514,SRR1471943,SRR662233, 42 2,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,2,1,2,1,0,0,0,1,1,0,1,2,1,0,0,1,1,0,0,1,1,1,1,0,0,3,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,4,0,0,1,0,0,2,0,1,1,0,0,1,0,0,0,1,1,3,0,1,1,0,1,0,0,0,0,0,0,0,0,2,4,5,0,0,1,2,0,0 22 0,2,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,1,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,1,0,0,0,2,0,4,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,1,0,1,1,0,0,1,0,0 . . . chr17 30993840 30993904 + ADAP2,RNF135, chr17 30993811 30994114 h38_mk_AluJb - 17 SRR604456,SRR821602,SRR1072367,SRR1084649,SRR1316940,SRR1331579,SRR1335446,SRR1340508,SRR1354446,SRR1387264,SRR1421177,SRR1444622,SRR1487194,SRR1500868,SRR600361,SRR602516,SRR818210, 48 3,0,4,0,0,0,1,0,0,5,0,2,1,1,1,0,1,0,4,0,0,1,2,1,1,1,0,0,2,3,0,0,1,0,1,0,2,1,0,0,2,0,0,0,1,0,0,1,1,3,0,1,0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,1,1,2,0,0,0,0,0,0,0,0,2,1,0,0,1,1,0,0,1,0,0,1,0,0,1,1,0,0,0,0,2,0,0,0,1,0,0,1,0,0,0,1,5 55 3,0,3,1,0,0,0,2,0,2,2,0,1,0,0,0,2,2,5,0,0,1,2,1,1,1,0,0,2,2,1,0,2,0,0,0,0,0,0,1,1,1,1,0,1,0,0,1,0,0,0,1,0,1,1,1,0,0,1,0,1,0,0,0,0,2,1,0,0,0,0,1,0,1,1,2,1,0,0,0,1,0,3,2,3,0,1,0,2,3,0,0,1,1,2,1,0,1,2,0,0,0,0,0,2,0,0,0,0,0,0,2,0,0,0,2,4 114 0.198408 0 chr17 31866655 31866715 - UTP6, chr17 31866437 31866745 h38_mk_AluS + 8 SRR1354446,SRR1356619,SRR1418127,SRR1447693,SRR1476571,SRR1488651,SRR1498550,SRR1500868, 52 0,0,0,3,0,0,2,0,0,0,0,0,3,2,0,0,3,0,0,0,3,0,0,2,3,1,3,4,3,1,5,6,0,2,2,0,0,3,0,4,3,9,0,3,1,2,0,0,0,4,2,0,0,3,1,2,0,0,0,0,0,0,2,1,1,0,0,0,3,3,3,0,0,4,0,0,7,2,0,0,0,0,5,0,2,2,0,2,2,3,1,0,3,0,0,0,0,0,0,0,0,0,0,0,2,4,0,0,0,13,0,0,0,2,3,3,0 55 0,0,0,0,0,1,0,0,4,0,0,2,0,2,0,0,4,0,0,0,1,0,4,5,0,0,1,0,4,0,4,2,1,0,2,0,0,0,1,5,0,0,0,1,0,0,0,0,0,0,0,3,0,3,2,0,2,0,0,1,4,0,0,0,3,1,1,0,5,5,0,3,0,0,0,2,4,2,0,1,3,2,5,2,2,3,0,1,4,3,1,0,4,4,3,2,0,0,0,1,0,0,1,0,0,9,0,3,2,0,0,0,7,4,2,0,0 118 0.023092 1 chr17 35366947 35367043 - SLFN11, chr17 35366780 35367097 h38_mk_AluJb + 5 SRR1084842,SRR1099499,SRR1326179,SRR602516,SRR604262, 81 0,1,5,3,4,2,3,0,2,1,1,0,1,0,3,1,5,2,2,0,4,1,4,1,6,15,2,0,1,1,0,0,0,1,0,2,0,1,3,0,5,2,1,1,0,1,3,1,0,0,0,1,2,1,4,2,3,1,2,1,0,0,0,2,1,1,1,2,2,0,1,0,2,1,2,0,3,0,0,2,2,0,1,0,3,4,3,1,6,0,3,0,1,0,0,2,4,2,0,2,2,3,4,0,1,6,0,0,3,5,2,4,0,0,1,4,4 8 1,0,0,1,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr17 35366947 35367063 - SLFN11, chr17 35366780 35367097 h38_mk_AluJb + 21 SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1331579,SRR1340508,SRR1342045,SRR1348159,SRR1387264,SRR1416754,SRR1444678,SRR1468514,SRR1471943,SRR1487362,SRR1498550,SRR602516,SRR604262,SRR613627,SRR614802,SRR662534,SRR818210, 81 0,1,5,3,4,2,3,0,2,1,1,0,1,0,3,1,5,2,2,0,4,1,4,1,6,15,2,0,1,1,0,0,0,1,0,2,0,1,3,0,5,2,1,1,0,1,3,1,0,0,0,1,2,1,4,2,3,1,2,1,0,0,0,2,1,1,1,2,2,0,1,0,2,1,2,0,3,0,0,2,2,0,1,0,3,4,3,1,6,0,3,0,1,0,0,2,4,2,0,2,2,3,4,0,1,6,0,0,3,5,2,4,0,0,1,4,4 52 1,0,2,2,0,3,1,0,0,3,0,1,0,0,0,1,2,0,1,1,0,0,2,0,0,7,5,0,0,0,0,2,2,2,0,0,1,0,0,0,2,0,1,0,0,0,0,0,1,0,0,1,1,2,1,0,0,0,0,0,0,0,0,4,3,1,1,1,1,0,1,0,0,0,0,0,2,0,0,2,0,2,0,1,1,3,1,0,7,0,1,0,0,0,1,1,2,2,0,2,0,2,3,0,0,0,0,0,0,0,0,2,0,1,1,4,0 88 0.884898 0 chr17 35884667 35884779 + AC015849.1,TAF15, chr17 35884632 35884813 h38_mk_AluJ4 - 4 SRR1102055,SRR1454803,SRR602516,SRR601500, 24 0,0,0,0,0,0,3,2,4,0,1,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,8,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,2,0,0,0,0,2,0,0,1,0,2,0,0,1,1,0,1,0,12,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0 31 0,1,8,0,2,0,1,0,0,0,0,0,3,0,0,0,3,0,0,8,0,0,0,0,0,0,1,0,0,0,2,3,0,0,0,0,0,0,0,3,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,2,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,7,0,0,1,0,0,2,1,0,3,1,0,4,0,6,0,2,0,1,0,10,0,2,0,0,0,1,0,1,0,0,0,0,0 . . . chr17 35884687 35884779 + AC015849.1,TAF15, chr17 35884632 35884813 h38_mk_AluJ4 - 9 SRR1336548,SRR1357478,SRR1414897,SRR1500868,SRR604262,SRR1331579,SRR1444678,SRR600361,SRR662534, 41 1,0,0,0,0,1,1,4,2,0,0,0,0,0,0,0,2,0,0,2,0,1,0,0,1,0,2,6,2,2,0,3,0,0,0,0,0,0,0,0,0,0,0,0,5,0,3,0,0,4,0,0,0,3,0,0,0,2,0,0,0,0,2,0,0,0,0,1,0,2,0,3,0,1,0,1,0,2,0,0,0,0,1,0,2,0,0,0,1,1,0,0,2,0,1,1,0,1,0,0,0,0,3,0,0,0,0,2,0,0,3,4,8,1,0,4,0 31 0,1,8,0,2,0,1,0,0,0,0,0,3,0,0,0,3,0,0,8,0,0,0,0,0,0,1,0,0,0,2,3,0,0,0,0,0,0,0,3,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,2,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,7,0,0,1,0,0,2,1,0,3,1,0,4,0,6,0,2,0,1,0,10,0,2,0,0,0,1,0,1,0,0,0,0,0 . . . chr17 40020273 40020619 - MED24, chr17 40020496 40020798 h38_mk_AluJo + 16 SRR1102055,SRR1314163,SRR1315970,SRR1348360,SRR1413562,SRR1415234,SRR1416754,SRR1432123,SRR1433796,SRR1454803,SRR1487685,SRR604262,SRR607337,SRR613627,SRR661973,SRR814967, 117 104,31,203,242,184,197,199,169,258,243,177,78,143,165,220,146,190,236,66,103,133,137,601,154,147,82,241,185,181,156,174,425,120,215,120,138,197,100,76,334,155,161,138,188,287,204,257,102,117,193,110,182,124,168,150,151,282,191,174,196,118,153,259,208,280,139,93,74,159,230,228,254,272,172,91,149,246,234,83,161,97,231,125,211,258,234,185,90,161,146,237,34,187,274,194,276,250,152,146,197,17,237,68,138,359,277,107,162,172,195,359,229,152,244,304,274,114 59 0,0,1,5,2,3,2,4,4,0,0,1,1,0,4,0,2,0,0,3,0,0,3,3,0,0,3,4,1,0,2,3,0,1,1,0,0,1,0,0,1,1,1,10,0,0,3,0,2,0,2,2,6,1,0,1,3,4,2,0,0,1,0,0,2,6,0,0,0,3,0,4,2,0,0,0,0,0,0,2,0,2,1,4,0,3,3,0,0,0,5,1,1,0,0,0,1,4,0,4,0,14,0,0,0,0,0,0,0,11,1,0,0,5,6,0,0 . . . chr17 40220415 40220538 + WIPF2, chr17 40220378 40220583 h38_mk_AluJb - 1 SRR1487194, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 22 0,0,0,0,0,0,2,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,2,0,0,0,0,0,0,3,0,0,0,1,0,0,0,0,0,1,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,2,1,0,0,0,0,0,1,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,1,0 117 0.007751 0 chr17 42137762 42137878 - RAB5C, chr17 42137597 42137921 h38_mk_AluSc + 99 SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657754,SRR661349,SRR662534,SRR814967,SRR818210,SRR821602, 117 5,5,22,15,9,12,10,8,15,13,9,8,23,14,25,7,26,9,6,1,14,7,54,12,12,11,15,7,15,16,18,6,11,11,6,7,14,15,9,12,24,13,6,13,10,10,15,7,14,10,7,7,5,12,15,9,20,4,14,7,25,7,9,28,12,4,16,11,4,9,18,11,26,8,6,19,27,4,16,12,12,16,11,13,17,16,15,4,27,13,17,5,9,12,8,5,31,5,19,15,5,8,5,2,8,9,1,14,6,12,16,18,1,17,11,22,4 116 4,4,6,14,11,7,11,9,12,10,17,8,11,9,11,7,22,9,4,0,7,6,36,11,14,5,11,4,12,10,12,4,8,11,6,7,9,5,9,10,15,13,9,17,5,12,3,3,9,13,7,9,9,15,4,5,8,3,10,9,29,8,10,23,10,12,8,8,7,10,13,6,9,10,11,13,21,5,12,4,6,19,16,17,21,23,13,8,27,10,14,1,6,4,5,9,23,4,21,8,2,7,3,2,20,17,4,8,10,9,7,22,5,25,10,11,6 118 0.102586 1 chr17 42877975 42878073 - LINC00671, chr17 42878049 42878270 h38_mk_AluSx + 1 SRR1453851, 33 0,0,0,2,1,1,0,0,0,0,1,0,0,0,1,1,0,0,1,0,0,1,0,3,1,0,0,0,0,0,0,3,0,0,1,0,2,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,1,0,1,1,1,0,0,1,0,3,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,3,0,0,0,0,1,0,1 41 0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,1,1,1,1,0,0,1,1,2,0,2,0,0,1,0,0,4,0,0,1,5,2,1,0,1,0,0,1,0,0,4,1,0,0,3,0,0,0,0,0,1,0,0,0,2,0,1,0,1,4,0,0,0,0,0,3,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,1,0,0,2,0,2,0,2,0,1,3,3,0,0,0,1,5,1 . . . chr17 44181623 44181720 - ASB16-AS1, chr17 44181576 44181786 h38_mk_AluSx + 97 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1389979,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 8,2,4,4,5,3,4,6,3,8,4,3,3,5,4,2,4,1,4,1,7,9,12,4,2,4,7,1,7,3,7,4,2,7,3,5,2,7,4,14,4,2,3,3,4,3,8,6,8,1,3,2,3,2,3,0,9,2,8,6,6,3,1,9,7,2,3,5,1,1,10,0,5,4,3,2,4,2,1,6,5,9,2,2,3,8,4,4,5,4,7,2,3,3,6,5,7,3,4,8,1,3,2,15,11,4,3,10,9,10,7,4,7,6,2,5,4 113 11,1,6,8,2,8,5,1,2,12,4,5,5,3,10,4,4,2,2,1,2,5,14,5,6,5,7,2,2,7,11,4,2,7,4,5,7,6,3,6,4,4,6,3,2,3,7,7,2,5,3,7,1,7,0,1,10,2,4,5,6,9,2,11,9,6,10,3,6,2,2,4,8,3,4,7,5,2,1,6,6,6,5,4,6,3,8,3,6,0,8,0,6,7,3,3,7,1,2,4,2,3,8,3,9,10,1,9,4,14,5,2,0,12,3,4,1 . . . chr17 44181623 44181741 - ASB16-AS1, chr17 44181576 44181786 h38_mk_AluSx + 1 SRR1084842, 115 8,2,4,4,5,3,4,6,3,8,4,3,3,5,4,2,4,1,4,1,7,9,12,4,2,4,7,1,7,3,7,4,2,7,3,5,2,7,4,14,4,2,3,3,4,3,8,6,8,1,3,2,3,2,3,0,9,2,8,6,6,3,1,9,7,2,3,5,1,1,10,0,5,4,3,2,4,2,1,6,5,9,2,2,3,8,4,4,5,4,7,2,3,3,6,5,7,3,4,8,1,3,2,15,11,4,3,10,9,10,7,4,7,6,2,5,4 1 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr17 44182930 44183069 - ASB16-AS1, chr17 44182772 44183136 h38_mk_AluJo + 1 SRR1326179, 105 5,0,3,8,2,7,4,0,1,6,2,2,4,2,5,4,3,2,1,1,1,1,8,5,4,3,6,1,0,3,4,2,1,4,2,0,6,3,2,2,4,2,2,1,1,2,3,5,1,2,2,4,0,2,0,0,4,2,2,2,4,8,2,9,3,3,7,2,2,1,1,3,1,2,4,4,3,2,1,3,4,4,3,1,6,3,5,1,2,0,3,0,5,5,1,1,3,1,2,1,1,3,5,3,7,6,1,0,1,10,2,2,0,4,3,3,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 114 0.584070 0 chr17 44182930 44183093 - ASB16-AS1, chr17 44182772 44183136 h38_mk_AluJo + 81 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1432123,SRR1435020,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602704,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 105 5,0,3,8,2,7,4,0,1,6,2,2,4,2,5,4,3,2,1,1,1,1,8,5,4,3,6,1,0,3,4,2,1,4,2,0,6,3,2,2,4,2,2,1,1,2,3,5,1,2,2,4,0,2,0,0,4,2,2,2,4,8,2,9,3,3,7,2,2,1,1,3,1,2,4,4,3,2,1,3,4,4,3,1,6,3,5,1,2,0,3,0,5,5,1,1,3,1,2,1,1,3,5,3,7,6,1,0,1,10,2,2,0,4,3,3,0 106 2,1,5,4,1,4,4,0,0,7,6,2,5,1,4,2,4,4,3,3,2,2,7,4,7,0,5,2,3,1,1,4,1,5,0,3,2,7,4,7,7,4,3,2,2,5,4,6,2,2,1,2,3,2,2,5,10,1,1,3,1,3,0,9,3,3,4,1,7,1,4,4,0,5,2,6,4,2,0,7,6,2,6,7,8,5,5,2,4,2,8,1,5,2,3,1,4,1,0,4,1,3,5,0,6,5,2,0,2,7,1,4,0,4,5,3,2 117 0.749835 0 chr17 4489870 4489991 - AC118754.1, chr17 4489723 4490049 h38_mk_AluJb + 4 SRR1340508,SRR1354446,SRR602516,SRR818210, 33 0,0,2,5,1,0,0,0,0,0,2,1,1,0,0,0,0,0,0,3,0,0,2,0,0,0,2,0,1,0,0,0,1,0,0,0,0,1,0,0,3,0,0,1,5,4,0,0,0,0,0,0,0,0,0,0,4,1,0,0,0,0,0,3,0,3,0,0,0,1,0,2,0,0,0,2,3,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,0,2,0,0,0,0,0,2,1,0,0,0,0,1,0,0,0,2,1 56 0,0,0,1,0,2,3,0,1,0,3,4,0,0,2,0,0,3,0,0,1,0,7,4,1,1,0,0,5,1,0,0,2,0,0,2,0,0,2,4,1,1,0,3,0,0,1,0,0,2,1,2,1,3,0,1,0,4,0,0,1,0,0,0,2,2,0,0,0,0,0,0,2,0,0,1,0,5,1,1,0,1,0,4,1,1,0,1,0,0,2,0,0,1,0,6,0,0,0,1,0,0,0,0,2,3,2,0,0,5,6,2,0,2,3,4,0 . . . chr17 45475888 45476073 - PLEKHM1, chr17 45475856 45476139 h38_mk_AluJb + 2 SRR1317344,SRR661349, 62 2,0,0,1,2,1,1,0,0,0,1,2,0,0,0,1,0,1,1,0,0,1,1,0,0,2,1,1,2,1,1,1,0,0,0,0,0,1,0,1,0,2,3,1,1,0,1,0,0,0,1,0,1,1,1,1,0,0,2,1,6,1,0,1,2,0,0,0,0,0,0,0,0,0,0,3,2,0,0,0,1,1,1,2,1,3,0,0,3,2,1,0,0,2,0,1,0,1,2,2,0,1,0,0,0,2,1,0,1,3,0,2,0,2,1,2,0 2 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 117 0.049366 0 chr17 46538351 46538426 - ARL17A, chr17 46538150 46538442 h38_mk_AluSz + 7 SRR1316940,SRR1333741,SRR1340508,SRR1416477,SRR1468514,SRR1471943,SRR663633, 57 0,1,2,0,0,0,0,1,0,1,1,0,0,1,0,1,0,1,1,0,0,2,4,0,0,1,3,1,2,0,1,1,1,1,0,0,0,0,0,2,1,2,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,1,2,1,0,0,1,2,0,1,1,0,0,0,0,1,4,1,1,3,0,1,3,0,1,2,1,0,2,0,0,2,0,0,0,1,1,1,1,0,1,0,2,1,1,1,0,0,1,2,1,0,0,0,0,7,1,0,0,0 71 0,0,3,2,1,1,3,0,1,3,1,0,1,1,0,1,1,2,2,0,1,2,3,3,4,0,1,4,2,0,0,2,0,0,0,1,2,1,0,2,4,1,2,1,1,0,2,1,1,0,0,1,0,3,0,1,1,1,1,1,1,0,0,0,0,2,0,0,3,0,0,0,2,1,0,0,5,0,1,1,0,0,2,1,0,0,1,0,2,1,1,0,0,1,3,2,2,1,0,1,0,2,0,0,2,3,0,0,0,0,3,1,6,2,0,1,5 114 0.410277 0 chr17 47463271 47463389 - MRPL45P2, chr17 47463262 47463441 h38_mk_AluJo + 1 SRR1455925, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0 3 0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 20 0.200000 0 chr17 47829139 47829236 - MRPL10, chr17 47828971 47829302 h38_mk_AluSz + 99 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1434526,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 11,1,10,29,23,19,22,11,9,12,12,15,4,18,27,18,16,23,11,6,20,5,55,26,19,14,29,8,21,10,27,15,3,7,5,20,11,5,8,26,13,10,6,11,16,22,33,14,19,10,10,16,7,16,24,9,12,11,18,15,18,8,10,27,31,8,0,14,14,19,23,16,36,18,13,11,20,22,1,18,18,16,7,32,25,18,7,9,11,7,17,5,17,20,18,29,29,13,19,12,1,22,14,18,41,30,3,30,5,43,35,19,11,38,29,28,13 110 2,1,2,4,2,5,4,1,1,2,4,8,4,1,6,4,8,7,1,1,5,1,18,5,5,2,7,3,10,2,9,4,1,4,1,5,4,1,1,7,4,2,0,5,5,1,11,1,3,5,2,3,3,2,7,6,5,1,5,0,9,3,1,6,6,4,1,3,6,1,6,4,10,9,1,2,5,4,0,3,2,4,1,3,6,3,0,2,1,1,4,0,4,4,2,4,10,4,3,2,0,2,5,0,13,8,1,6,1,11,7,8,1,16,5,13,3 118 0.494120 1 chr17 47829139 47829259 - MRPL10, chr17 47828971 47829302 h38_mk_AluSz + 3 SRR1072367,SRR1354446,SRR613627, 116 11,1,10,29,23,19,22,11,9,12,12,15,4,18,27,18,16,23,11,6,20,5,55,26,19,14,29,8,21,10,27,15,3,7,5,20,11,5,8,26,13,10,6,11,16,22,33,14,19,10,10,16,7,16,24,9,12,11,18,15,18,8,10,27,31,8,0,14,14,19,23,16,36,18,13,11,20,22,1,18,18,16,7,32,25,18,7,9,11,7,17,5,17,20,18,29,29,13,19,12,1,22,14,18,41,30,3,30,5,43,35,19,11,38,29,28,13 3 2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.493820 1 chr17 49675895 49676016 - SPOP, chr17 49675728 49676054 h38_mk_AluSz + 102 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 112 4,8,9,17,9,5,6,4,3,3,9,3,12,8,15,12,13,8,1,3,12,5,17,1,9,4,17,5,8,8,10,5,1,0,3,9,17,8,5,4,9,7,6,7,4,8,6,5,6,8,3,4,6,7,8,6,8,0,9,10,10,1,1,12,3,2,4,3,5,1,11,2,13,10,4,9,6,2,5,16,13,7,5,7,11,7,3,3,13,7,9,0,5,7,10,13,12,7,7,5,0,9,5,0,9,1,3,1,9,32,10,12,3,23,6,15,3 110 5,4,2,11,8,7,5,6,1,2,11,3,7,6,13,10,8,3,2,2,6,3,19,3,6,2,8,3,2,7,10,4,0,0,1,6,5,5,3,2,7,4,1,7,3,7,7,8,5,5,5,4,4,6,5,6,6,0,5,3,9,0,3,10,8,3,3,2,6,4,10,2,8,3,5,5,7,3,7,7,5,5,3,7,6,6,1,1,6,5,8,0,1,9,11,11,18,1,7,4,0,8,6,0,5,3,5,1,23,17,12,8,1,22,3,12,2 118 0.520939 1 chr17 4995806 4995930 - INCA1, chr17 4995638 4995970 h38_mk_AluSp + 5 SRR1340508,SRR1360128,SRR1399779,SRR1471943,SRR662534, 99 2,6,4,2,2,5,1,2,1,3,3,3,0,2,6,3,2,2,0,1,2,2,6,1,4,4,4,1,2,2,2,5,2,4,2,0,7,2,1,2,2,7,2,3,2,6,2,0,3,2,3,0,0,1,3,1,4,4,6,2,5,2,2,3,4,0,1,2,2,7,3,1,2,1,3,0,3,4,2,1,0,2,3,1,4,5,4,0,4,6,0,0,2,2,0,1,0,1,4,2,0,1,0,10,11,5,1,4,2,1,0,1,2,2,0,2,1 32 1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,1,1,0,0,0,1,2,0,0,1,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,3,0,0,0,0,2,1,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,1,0,2,0,1,0,1,0,0,0,0,1,0,0,1,0,2,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,1 . . . chr17 5030708 5030897 + KIF1C, chr17 5030488 5030833 h38_mk_AluJo - 2 SRR1402900,SRR1440986, 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 104 7,0,18,12,6,9,11,11,8,2,18,4,0,9,10,5,4,3,0,2,11,7,8,6,11,3,16,21,11,18,19,21,7,9,12,4,2,7,0,10,7,12,2,12,6,13,10,5,3,8,3,9,10,5,7,10,18,0,9,3,0,4,6,2,13,15,5,0,7,24,2,8,13,6,2,5,21,10,2,4,6,7,0,6,5,16,4,3,0,9,13,0,6,13,21,7,11,6,6,13,0,5,3,0,14,27,11,22,22,18,14,11,14,7,23,13,0 . . . chr17 50536029 50536199 + EPN3, chr17 50536015 50536171 h38_mk_AluJo - 5 SRR1102055,SRR1356619,SRR1457482,SRR1487194,SRR602314, 14 0,0,0,0,0,0,6,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 48 0,0,0,1,1,0,3,0,0,0,2,0,0,0,0,1,0,0,0,0,2,0,3,0,0,1,3,1,1,0,1,0,0,3,1,1,0,0,0,0,0,5,1,0,1,1,0,0,1,0,0,0,1,0,0,4,2,0,0,1,2,0,0,3,2,3,0,1,0,1,0,2,0,3,0,1,0,0,0,0,2,1,0,6,4,1,0,0,0,0,0,0,0,0,4,0,3,0,5,0,0,7,0,0,2,0,0,2,2,0,6,0,0,1,0,1,0 57 0.758292 0 chr17 5479367 5479470 - DERL2, chr17 5479446 5479536 h38_mk_Alu + 1 SRR1408368, 22 0,0,0,0,2,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0,1,0,0,0,0,0,2,1,0,0,2,0,2,0,0,0,0,0,0,1,1,2,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0 12 0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr17 5479367 5479488 - DERL2, chr17 5479446 5479536 h38_mk_Alu + 2 SRR1433796,SRR604262, 22 0,0,0,0,2,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0,1,0,0,0,0,0,2,1,0,0,2,0,2,0,0,0,0,0,0,1,1,2,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0 8 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0 118 0.004458 1 chr17 5533292 5533384 - NLRP1, chr17 5533272 5533561 h38_mk_AluJb + 16 SRR1099499,SRR1314163,SRR1333741,SRR1336548,SRR1387264,SRR1402900,SRR1415234,SRR1416754,SRR1487685,SRR1498550,SRR602314,SRR602704,SRR604262,SRR613627,SRR657777,SRR661973, 42 3,0,2,0,0,1,0,1,0,2,0,2,0,0,0,0,0,1,0,1,0,1,1,0,0,0,2,0,0,0,1,1,0,0,0,0,0,1,0,0,1,0,0,0,0,1,0,1,0,1,2,0,2,3,0,4,1,0,0,0,0,0,0,2,1,0,0,0,0,0,2,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,2,0,3,0,0,0,2,0,2,0,2,1,0,0,0,2,0,0,0,0,2,0,1,2,2,4,0,0,0,0,1 113 14,5,6,12,8,8,1,3,4,20,4,9,2,3,2,3,2,2,10,4,4,7,14,5,6,20,14,6,3,2,3,6,5,2,8,5,5,5,6,1,9,11,2,1,6,4,8,5,9,7,6,2,5,7,5,9,8,6,4,7,0,3,3,11,6,3,2,2,10,4,4,8,2,6,6,4,4,6,0,12,6,9,4,4,4,5,7,3,5,6,7,8,9,0,2,4,6,4,8,4,2,15,11,7,11,14,2,23,8,17,13,10,0,4,3,7,9 . . . chr17 5533304 5533384 - NLRP1, chr17 5533272 5533561 h38_mk_AluJb + 89 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387264,SRR1387809,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1418837,SRR1421177,SRR1432123,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1468955,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR602314,SRR602704,SRR604262,SRR604456,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818210,SRR821602, 112 9,8,2,9,6,10,0,1,3,9,7,8,2,2,3,6,5,1,19,1,1,6,11,2,7,9,6,2,3,6,4,7,6,1,4,5,3,6,4,5,5,8,0,2,1,6,8,8,5,5,1,1,2,8,4,8,16,0,2,5,0,2,2,13,6,5,3,3,5,2,3,8,4,5,2,4,2,3,0,7,3,11,2,3,4,6,6,1,7,2,8,5,7,3,1,5,4,4,6,1,2,7,3,7,6,7,2,2,10,6,2,4,1,3,5,4,13 113 14,5,6,12,8,8,1,3,4,20,4,9,2,3,2,3,2,2,10,4,4,7,14,5,6,20,14,6,3,2,3,6,5,2,8,5,5,5,6,1,9,11,2,1,6,4,8,5,9,7,6,2,5,7,5,9,8,6,4,7,0,3,3,11,6,3,2,2,10,4,4,8,2,6,6,4,4,6,0,12,6,9,4,4,4,5,7,3,5,6,7,8,9,0,2,4,6,4,8,4,2,15,11,7,11,14,2,23,8,17,13,10,0,4,3,7,9 . . . chr17 59884661 59884756 - TUBD1, chr17 59884629 59884945 h38_mk_AluSz + 1 SRR1331579, 18 0,1,4,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,0,0,1,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,2,0,0,1,0,0,3,0,0,0,0,0 32 1,0,0,0,0,0,0,1,1,2,0,0,0,0,2,0,4,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,1,1,0,0,0,1,0,1,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,1,0,1,0,1,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2 105 0.177456 0 chr17 62929519 62929697 - AC005972.4, chr17 62929576 62929731 h38_mk_AluJo + 17 SRR1084842,SRR1337098,SRR1342045,SRR1354446,SRR1356619,SRR1390601,SRR1432123,SRR1435020,SRR1440986,SRR1447693,SRR1455925,SRR1468955,SRR1474777,SRR595926,SRR602704,SRR662534,SRR814967, 79 0,3,0,13,6,7,2,4,9,0,8,1,0,0,1,4,1,1,2,0,8,0,23,10,0,3,5,1,8,1,6,8,0,5,1,7,12,6,0,0,6,0,0,7,5,2,12,0,2,7,0,5,1,2,0,2,9,0,4,3,3,3,7,7,8,0,0,1,1,0,3,0,19,0,1,6,3,5,0,2,7,7,0,5,8,0,1,0,1,0,8,0,0,3,2,4,2,0,2,3,0,2,3,0,7,0,0,0,10,0,11,13,0,10,11,20,0 26 0,0,0,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,4,3,3,0,2,1,2,0,0,0,0,2,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0,8,0,0,0,2,0,0,0,10,0,0,0,1,3,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,4,0,0,1,0,0,0,0,0,0,0,2,0,3,0,7,0,7,0,0,0 69 0.987681 0 chr17 64764451 64764548 - ARHGAP27P1-BPTFP1-KPNA2P3, chr17 64764414 64764613 h38_mk_AluSx1 + 7 SRR1099499,SRR1102055,SRR1386708,SRR1399779,SRR595926,SRR657777,SRR818033, 25 12,0,0,0,0,21,12,0,0,0,0,0,0,0,0,12,0,0,0,0,0,0,0,13,0,0,19,0,0,7,10,0,0,0,0,0,0,0,0,27,0,10,0,0,19,14,0,0,0,18,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,0,0,30,0,0,0,0,24,0,23,0,0,0,0,0,0,19,0,0,0,0,0,13,0,0,0,0,0,10,0,0,0,3,0,18,56,0,0,0,28,19,0,0 36 0,0,0,7,6,5,2,0,0,8,0,0,0,0,0,0,0,6,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,1,0,0,4,1,0,6,0,1,0,0,5,0,1,0,3,2,0,0,0,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,1,0,0,0,4,1,0,0,1,0,6,0,0,1,7,0,0,0,0,0,0,0,0,0,3,5,2,2,0,0,4,0,0,0,3,2,1 . . . chr17 64898362 64898459 - LRRC37A3, chr17 64898197 64898519 h38_mk_AluSq2 + 31 SRR1102055,SRR1320963,SRR1328895,SRR1333741,SRR1337098,SRR1340508,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1386708,SRR1390601,SRR1399779,SRR1414897,SRR1439873,SRR1444622,SRR1447693,SRR1453341,SRR1468955,SRR1471943,SRR1474553,SRR1500868,SRR600361,SRR602516,SRR602704,SRR604456,SRR613627,SRR661973,SRR662233,SRR662534,SRR814967, 99 1,1,3,3,4,4,3,1,3,3,6,1,3,2,2,3,3,7,0,2,2,0,5,1,2,2,4,3,8,3,2,3,0,5,3,3,5,1,1,5,4,1,1,3,5,1,1,2,2,4,1,1,2,0,2,0,6,1,0,3,0,0,1,3,2,2,4,3,2,3,4,4,4,3,0,1,4,2,0,10,2,4,0,11,2,4,4,0,1,2,2,2,6,6,4,5,5,3,3,0,1,5,4,0,7,3,0,0,11,5,7,5,0,5,6,2,0 70 1,0,0,2,0,0,3,1,0,0,1,0,0,1,1,1,0,2,1,0,1,0,7,1,0,1,0,1,0,1,4,3,1,2,0,1,0,0,0,3,0,3,2,2,2,1,4,0,0,1,1,1,0,0,1,0,1,1,0,1,0,2,1,1,1,0,2,0,4,1,1,0,2,0,0,1,1,2,0,3,2,1,0,1,0,1,0,0,3,2,0,0,2,0,0,5,3,0,3,0,1,2,0,2,2,1,0,0,0,2,3,3,0,3,1,1,2 . . . chr17 64970923 64971163 - AMZ2P1, chr17 64970892 64971190 h38_mk_AluJo + 11 SRR1333741,SRR1336548,SRR1341365,SRR1435020,SRR1440986,SRR1453341,SRR1454803,SRR1485459,SRR1487362,SRR595926,SRR602704, 14 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,3,0,0,0,7,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,0,19,0,0,0,0,2,0,22,0,0,0,0,0,8,0,0,0,0,0,21,0,14,0,0,0,0,10,0,0,0,0,0,8,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 98 8,0,5,7,10,6,7,6,4,3,6,4,9,2,4,8,4,12,0,5,4,3,19,2,0,3,0,14,1,0,11,9,1,10,3,3,5,12,2,11,8,15,3,4,4,3,8,6,5,4,2,4,0,2,0,2,8,2,7,8,6,11,0,2,10,5,3,0,7,5,4,12,2,0,3,2,11,0,3,6,4,10,4,10,10,6,3,0,3,0,4,0,7,1,10,11,6,11,8,8,0,12,0,3,8,12,3,0,4,6,16,6,0,4,21,8,0 108 0.416861 0 chr17 68106422 68106553 + AMZ2,LINC00674, chr17 68106393 68106735 h38_mk_AluJb - 89 SRR602314,SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR661349,SRR662534,SRR814967,SRR818033, 113 19,25,6,4,5,6,4,1,1,5,1,5,10,6,7,4,16,7,5,2,7,6,17,6,3,10,7,2,6,5,2,3,8,5,2,7,5,10,2,2,10,9,8,5,2,7,6,6,9,4,12,5,4,8,7,2,6,13,5,6,14,2,0,9,4,3,9,7,4,2,6,2,7,10,8,14,10,2,9,6,3,5,3,7,7,6,8,2,14,10,7,1,7,7,5,5,6,9,11,10,2,5,4,0,8,6,2,5,6,0,4,3,0,14,3,6,6 113 13,21,12,5,7,1,5,2,2,10,6,6,9,7,7,6,6,5,5,2,13,9,21,7,2,12,1,6,4,8,2,3,11,2,5,6,7,8,3,4,7,6,4,7,3,5,4,9,6,2,21,3,4,5,3,5,6,10,6,8,11,2,2,12,4,9,12,4,10,5,6,1,3,5,8,4,13,2,4,2,2,4,4,6,10,3,9,2,17,6,5,1,10,4,7,5,5,15,14,8,3,6,5,0,8,13,0,1,6,4,0,2,0,10,4,6,8 117 0.372013 0 chr17 68180895 68181194 + LINC00674, chr17 68181113 68181342 h38_mk_AluSx - 1 SRR1387809, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr17 68282997 68283123 - SLC16A6, chr17 68282963 68283143 h38_mk_AluJ + 2 SRR1326179,SRR602704, 18 0,0,0,1,0,0,0,1,0,1,0,0,0,0,2,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,0,0,3,0 74 0.183221 0 chr17 69325699 69325817 - ABCA5, chr17 69325632 69325841 h38_mk_AluJo + 2 SRR1342045,SRR661349, 21 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,1,0,1,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0,0,0,0,0,0,2,0,4,3,0,0,0,0,0,0,0,0,0,3,0,2,0,1,2,0,1,0,0,0 14 0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,3,0,0,0,0,0,0,0,3,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,0,0,0 52 0.463507 0 chr17 74974568 74974730 + HID1-AS1, chr17 74974380 74974690 h38_mk_AluJ - 1 SRR1335446, 25 1,3,0,2,0,0,0,0,0,0,0,0,1,0,0,0,1,0,2,0,0,0,2,0,0,2,1,0,1,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,1,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,2 37 0,1,0,0,0,0,0,0,3,2,0,2,0,0,0,0,0,0,2,0,1,0,1,1,0,1,1,1,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,1,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,2,0,1,0,0,1,2,0,0,0,1,0,0,0,2,0,0,0,0,1,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,3,0,2,2,0,1,1,0,0,0,3,0 . . . chr17 75149091 75149185 - JPT1, chr17 75149061 75149385 h38_mk_AluJb + 1 SRR604456, 88 0,0,2,2,0,1,1,3,2,3,1,2,0,0,2,0,3,4,0,2,2,1,6,0,3,1,4,3,4,4,1,1,2,4,0,3,5,2,0,2,4,4,3,1,5,2,2,0,2,1,1,0,0,2,2,2,2,3,0,2,5,0,0,4,2,0,0,2,0,4,0,2,2,1,1,2,2,0,2,1,3,2,3,1,0,7,5,1,6,3,2,0,0,0,1,3,3,1,2,4,0,2,1,5,1,0,1,0,6,1,1,4,0,3,2,4,2 95 2,0,4,7,0,3,6,2,3,4,3,5,5,3,4,5,7,2,0,0,8,1,26,7,2,0,9,3,7,0,2,6,0,8,1,6,4,2,0,5,2,0,2,14,6,1,6,1,1,5,1,2,2,2,1,0,7,0,5,5,4,4,8,12,6,1,0,1,0,1,8,5,13,3,0,6,5,4,0,8,0,5,2,1,6,2,1,0,2,0,11,3,9,10,4,17,17,3,11,2,0,9,1,0,1,3,0,1,8,2,8,4,0,11,3,11,2 118 0.032887 1 chr1 77701369 77701643 - USP33, chr1 77701550 77701670 h38_mk_AluJb + 4 SRR1314163,SRR1414897,SRR1471943,SRR657777, 117 52,32,58,230,115,86,125,57,107,51,127,81,71,60,152,95,62,88,24,19,148,48,512,121,112,78,160,54,146,56,90,68,38,163,52,127,107,115,15,126,143,107,76,126,108,91,145,48,51,84,56,89,30,59,58,85,134,32,112,107,70,100,35,174,102,46,25,57,79,85,146,29,204,72,28,124,178,56,43,144,120,110,33,128,186,118,47,5,32,46,148,20,69,165,117,151,133,47,46,114,7,106,90,6,176,224,48,103,180,326,222,125,16,215,194,256,23 7 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2 118 0.949452 1 chr17 78496856 78497036 + DNAH17-AS1, chr17 78496657 78496981 h38_mk_AluY - 5 SRR1072367,SRR1337412,SRR1433796,SRR1453341,SRR663633, 15 1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0 70 9,3,2,0,0,1,1,0,1,3,0,1,0,2,4,4,0,1,0,0,2,8,2,4,2,1,1,1,0,1,3,1,0,1,0,1,1,0,0,4,5,2,0,0,6,0,0,0,6,0,7,2,0,3,3,0,1,3,6,0,3,3,0,1,3,10,2,0,3,3,9,0,1,0,0,1,3,0,4,2,0,1,0,1,3,1,1,2,2,1,3,0,4,2,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,6,0,3,24,3,0,2,0 . . . chr17 78791794 78792080 - USP36, chr17 78791803 78791898 h38_mk_AluJ + 1 SRR1331579, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 21 0,0,0,0,0,0,0,3,0,0,0,0,3,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 96 0.042532 0 chr17 81446738 81446830 + BAHCC1, chr17 81446517 81446862 h38_mk_AluJ - 103 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 112 7,1,6,15,7,8,3,1,3,4,11,1,2,8,10,8,5,3,1,5,8,4,22,8,3,4,8,0,3,5,6,4,5,5,5,5,1,8,3,4,5,7,7,8,6,3,6,9,9,6,6,9,1,3,4,6,4,8,7,3,3,5,0,9,3,3,3,3,5,2,1,1,10,7,1,11,3,5,1,3,3,4,4,11,8,7,5,2,1,2,8,1,2,15,7,8,12,1,6,4,1,4,5,0,7,6,3,1,6,4,10,8,0,16,4,8,0 111 12,1,5,23,8,5,14,7,3,5,14,6,4,7,9,5,10,6,6,4,9,0,17,9,3,5,10,0,5,8,11,7,1,1,2,7,2,10,1,6,8,13,12,18,4,5,4,10,7,9,3,8,4,10,4,6,9,2,5,2,5,7,0,10,10,9,1,8,8,4,2,1,13,7,6,9,5,2,2,5,8,10,1,9,8,13,6,1,2,6,14,0,5,12,7,9,14,4,9,9,3,11,2,0,12,11,1,3,14,11,7,13,0,16,2,11,2 117 0.734338 0 chr17 81826380 81826515 - MCRIP1, chr17 81826369 81826547 h38_mk_AluJb + 13 SRR1337412,SRR1340508,SRR1418837,SRR1435020,SRR1442571,SRR1464373,SRR1468514,SRR1487685,SRR602516,SRR604262,SRR662534,SRR814967,SRR818033, 115 5,7,3,12,1,6,5,11,4,5,5,4,5,2,11,3,22,8,1,4,6,10,25,5,7,2,3,2,9,6,4,16,1,11,4,4,9,3,2,6,7,11,3,7,9,5,12,8,11,3,4,6,3,4,8,4,17,3,6,21,13,8,4,7,7,5,3,0,3,8,7,7,9,4,1,8,9,7,3,4,1,4,14,9,5,2,3,5,9,3,9,2,8,9,3,8,17,8,5,3,0,11,2,5,11,1,5,3,6,10,18,12,4,17,12,8,3 79 1,1,0,0,0,1,0,0,1,1,1,1,2,5,2,1,4,1,0,2,1,6,10,5,1,1,0,0,0,1,0,2,0,1,0,0,2,1,0,1,1,2,2,2,2,3,3,0,2,1,1,2,0,0,4,0,4,0,2,9,3,2,3,2,4,7,1,1,0,0,3,0,0,1,0,4,4,0,3,1,2,2,2,1,3,3,3,1,0,0,0,1,1,1,0,7,4,3,1,2,0,0,0,0,0,0,0,0,1,1,5,5,0,6,7,2,1 118 0.083670 1 chr17 81893104 81893187 + ANAPC11, chr17 81893003 81893159 h38_mk_AluSz - 1 SRR821602, 111 7,0,8,9,3,6,3,2,9,11,2,5,5,7,1,8,9,8,2,3,4,3,12,2,8,5,0,5,7,3,3,13,3,8,4,6,15,3,1,5,8,9,10,11,3,7,6,3,3,5,6,5,5,3,4,7,4,5,0,10,12,3,7,6,6,3,0,6,12,1,12,5,4,6,1,3,11,5,9,6,2,6,6,7,2,5,3,3,10,7,5,2,5,3,0,12,3,3,1,10,0,4,3,18,26,5,8,7,13,24,12,6,7,13,9,1,11 100 1,1,3,3,0,2,1,1,0,5,3,1,1,2,0,2,4,4,4,0,1,3,14,1,4,2,2,1,5,3,0,1,2,2,2,4,4,3,1,2,2,4,0,0,4,2,4,3,1,6,2,4,0,2,1,5,4,1,1,6,1,1,7,9,1,2,1,0,6,2,1,2,2,1,3,2,7,3,3,1,0,5,7,3,3,4,4,0,0,1,0,4,0,1,0,2,1,2,2,2,0,1,0,10,5,3,1,5,2,2,4,9,1,1,3,3,3 118 0.037252 1 chr17 81893104 81893187 + ANAPC11, chr17 81893140 81893401 h38_mk_AluSx3 - 1 SRR821602, 111 7,0,8,9,3,6,3,2,9,11,2,5,5,7,1,8,9,8,2,3,4,3,12,2,8,5,0,5,7,3,3,13,3,8,4,6,15,3,1,5,8,9,10,11,3,7,6,3,3,5,6,5,5,3,4,7,4,5,0,10,12,3,7,6,6,3,0,6,12,1,12,5,4,6,1,3,11,5,9,6,2,6,6,7,2,5,3,3,10,7,5,2,5,3,0,12,3,3,1,10,0,4,3,18,26,5,8,7,13,24,12,6,7,13,9,1,11 100 1,1,3,3,0,2,1,1,0,5,3,1,1,2,0,2,4,4,4,0,1,3,14,1,4,2,2,1,5,3,0,1,2,2,2,4,4,3,1,2,2,4,0,0,4,2,4,3,1,6,2,4,0,2,1,5,4,1,1,6,1,1,7,9,1,2,1,0,6,2,1,2,2,1,3,2,7,3,3,1,0,5,7,3,3,4,4,0,0,1,0,4,0,1,0,2,1,2,2,2,0,1,0,10,5,3,1,5,2,2,4,9,1,1,3,3,3 118 0.037252 1 chr17 81893552 81893614 + ANAPC11, chr17 81893512 81893589 h38_mk_AluJb - 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 167,71,222,278,131,165,158,185,230,389,241,175,160,194,240,117,189,310,132,94,188,197,774,167,312,165,221,162,281,195,144,346,118,326,158,199,426,203,140,249,234,276,139,239,176,213,274,219,175,225,181,188,125,153,182,162,294,165,186,338,351,231,244,329,322,137,150,161,181,153,296,268,241,229,142,216,260,222,256,174,133,308,187,236,213,227,178,131,229,126,290,49,189,136,123,236,202,132,212,188,19,197,90,190,489,184,103,105,135,193,310,216,137,219,271,272,135 117 232,99,199,292,156,204,202,190,248,456,297,172,204,189,333,169,225,365,134,93,222,225,976,170,388,177,265,175,338,251,171,440,147,349,144,290,463,272,155,329,316,278,148,305,221,236,292,276,195,283,222,209,141,203,208,192,356,182,220,370,388,268,266,382,359,130,147,158,173,223,333,307,306,254,152,248,367,261,276,232,165,332,219,252,269,201,196,155,251,169,343,70,257,190,181,323,263,194,265,260,26,217,111,259,436,249,123,113,196,175,342,266,153,313,310,350,153 118 0.973698 1 chr17 82184958 82185303 - CCDC57, chr17 82185202 82185303 h38_mk_AluJb + 5 SRR1333741,SRR1434526,SRR1453341,SRR602704,SRR814967, 43 0,0,0,6,0,0,0,0,0,0,6,0,4,0,3,0,0,7,0,0,0,3,0,2,0,5,0,1,1,3,0,0,0,0,0,0,0,0,0,6,2,3,0,0,0,5,8,0,3,2,1,0,2,3,0,0,1,2,7,2,0,0,0,0,1,5,0,0,0,5,2,0,0,0,2,0,17,0,0,0,0,0,0,3,0,0,0,2,0,2,2,0,0,6,0,0,3,1,0,0,0,0,4,0,5,0,0,0,5,0,0,0,0,8,0,7,0 20 0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,1,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,0,2,0,0,0 50 0.796899 0 chr18 11895185 11895277 - MPPE1, chr18 11895153 11895417 h38_mk_AluJ4 + 23 SRR1084842,SRR1318163,SRR1320963,SRR1326179,SRR1348159,SRR1360128,SRR1367943,SRR1386708,SRR1387264,SRR1390601,SRR1402900,SRR1432123,SRR1434526,SRR1455925,SRR1464373,SRR1468514,SRR1474777,SRR1487194,SRR1487362,SRR602704,SRR607337,SRR814967,SRR818210, 88 0,0,1,5,1,1,4,0,1,0,4,3,4,6,5,3,3,1,1,0,5,2,7,1,2,6,3,0,1,1,2,1,3,1,0,8,2,2,1,4,1,0,0,5,3,3,3,0,0,4,1,1,1,0,1,1,4,0,4,2,0,3,0,0,0,2,0,1,2,1,0,2,6,1,0,1,4,2,0,1,4,2,1,1,3,3,2,2,2,1,2,0,1,0,0,0,1,0,1,1,1,1,1,0,3,4,2,5,1,0,5,4,0,6,1,11,2 63 0,0,0,4,0,0,2,0,0,0,1,4,1,3,3,0,0,0,0,0,1,1,1,0,2,0,2,0,1,1,0,0,1,1,2,2,1,0,0,3,3,3,0,1,1,2,1,0,1,0,0,2,0,2,1,2,2,0,2,0,0,2,0,0,0,0,0,1,2,3,2,2,2,2,0,3,5,1,0,0,0,2,1,0,3,2,1,1,4,1,0,1,1,2,0,0,1,0,0,2,0,0,0,0,1,0,0,0,1,6,1,0,0,7,0,5,0 118 0.080381 1 chr18 26892871 26892992 + AQP4-AS1, chr18 26892832 26893158 h38_mk_AluSx - 47 SRR1085495,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1360563,SRR1368772,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1413562,SRR1418127,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1442571,SRR1444678,SRR1447693,SRR1454803,SRR1464373,SRR1471943,SRR1485459,SRR1487362,SRR1498550,SRR1500868,SRR601500,SRR602516,SRR604262,SRR604456,SRR607337,SRR613627,SRR657754,SRR661973,SRR662233,SRR818033,SRR818210, 82 0,0,1,2,1,1,0,2,0,2,3,2,1,0,5,2,3,2,0,1,2,3,4,2,3,0,3,0,0,1,0,1,1,4,0,1,3,2,0,5,3,0,1,3,2,2,1,0,8,0,0,1,1,1,2,5,3,1,2,4,3,0,0,2,1,3,1,1,4,0,0,2,0,0,0,2,1,1,1,4,0,1,1,3,2,1,1,1,1,5,0,0,0,1,0,2,2,4,6,4,0,2,0,0,5,6,0,5,2,3,4,0,0,0,2,6,1 95 4,0,1,2,2,0,4,4,0,0,0,0,1,5,8,3,5,2,1,3,2,3,15,4,2,2,7,0,5,2,1,1,1,2,0,0,3,2,1,4,5,4,6,3,1,5,2,3,3,5,3,1,0,3,2,6,8,3,2,2,4,5,0,2,1,2,2,2,4,1,1,2,6,3,3,4,12,4,1,7,3,4,2,3,3,6,9,0,5,3,0,0,0,4,0,2,1,4,3,5,0,6,0,0,0,21,3,0,1,5,4,7,0,4,1,4,1 106 0.906100 0 chr1 829003 829104 + LINC01128, chr1 828977 829272 h38_mk_AluSq2 - 113 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 11,11,13,47,19,24,44,17,16,18,35,16,10,12,27,11,56,19,12,7,27,5,76,20,27,15,34,4,28,15,10,14,9,9,10,29,19,23,4,14,18,7,6,39,12,10,21,4,12,8,12,17,6,5,12,15,17,8,16,23,12,15,7,30,20,14,9,11,8,10,18,12,39,14,8,35,29,17,2,27,14,16,7,18,22,16,11,2,14,12,28,9,19,31,18,30,55,6,18,12,4,16,11,0,21,13,6,6,39,51,41,28,5,49,28,50,20 116 11,7,6,52,14,16,35,14,18,20,28,12,9,13,25,13,40,16,17,4,26,7,85,17,27,23,27,4,42,8,14,19,9,14,13,23,20,28,4,16,21,16,15,31,13,13,23,6,16,20,5,17,6,10,18,12,17,7,16,19,9,10,11,34,17,10,14,15,11,17,19,12,45,31,6,31,30,11,6,34,14,16,11,24,26,15,14,11,16,9,26,4,16,41,21,23,48,10,8,16,0,12,15,1,22,25,10,18,37,51,66,30,1,58,37,63,15 118 0.997305 1 chr18 39882421 39882601 + LINC01902, chr18 39882242 39882541 h38_mk_AluJb - 6 SRR1315970,SRR1357478,SRR1435775,SRR1471943,SRR1487194,SRR818033, 26 1,0,0,0,0,0,0,0,4,0,0,0,1,1,0,0,1,1,0,0,2,0,2,0,0,0,2,0,3,0,0,2,0,0,0,0,0,0,0,0,0,1,0,4,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,3,0,0,0,0,1,0,2,0,0,0,0,0,1,0,0,1,0,0,0,2,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 28 0,0,0,1,1,0,4,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,1,1,0,0,1,0,0,0,0,0,1,1,1,0,0,0,0,0,2,0,0,0,1,2,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0 . . . chr18 4021619 4021741 + DLGAP1-AS4, chr18 4021577 4021908 h38_mk_AluSx - 10 SRR1102055,SRR1333741,SRR1354446,SRR1421177,SRR1432123,SRR1440986,SRR1455925,SRR1457503,SRR1468514,SRR657754, 23 0,0,0,0,1,1,4,0,5,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,5,0,0,0,0,1,0,0,6,1,2,0,6,0,0,0,0,2,0,2,0,3,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,5,12,0,8,0,0,0,0,0,0,1,0,0 59 0,0,10,14,0,4,4,6,0,8,8,0,5,0,0,3,2,8,0,0,0,0,25,4,10,0,3,0,3,0,7,18,0,6,0,0,0,5,0,6,0,0,0,6,8,0,1,3,0,11,3,10,0,4,3,4,13,0,2,0,0,0,14,15,11,0,3,0,0,0,9,18,8,0,1,3,7,6,0,14,1,0,0,0,7,0,0,1,0,0,0,0,3,12,0,13,8,9,0,0,0,0,0,0,0,3,0,10,2,0,0,3,3,0,0,4,0 . . . chr18 606978 607099 + CLUL1, chr18 606937 607134 h38_mk_AluJ - 44 SRR1084842,SRR1102055,SRR1315970,SRR1317344,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1390601,SRR1408208,SRR1421177,SRR1432123,SRR1435020,SRR1439873,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1474553,SRR1487194,SRR1487362,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR657754,SRR657777,SRR661349,SRR662233,SRR662534,SRR814967,SRR818210, 81 0,0,1,10,0,0,4,0,2,1,13,2,0,2,4,1,1,2,0,0,6,0,11,0,2,3,2,0,7,1,5,2,0,2,0,3,6,3,1,0,8,0,0,5,1,0,8,1,0,2,0,1,2,1,4,3,2,1,0,5,0,1,1,7,1,0,0,1,2,3,5,0,3,0,0,12,3,2,2,1,5,1,0,6,7,6,2,0,0,1,2,0,0,4,3,17,15,0,3,1,1,2,2,0,0,5,2,2,6,1,16,6,0,8,2,5,0 82 0,0,0,23,3,1,7,0,5,0,7,3,0,3,2,0,0,1,1,1,7,0,19,3,3,5,6,0,5,0,3,0,0,3,2,2,3,2,1,0,3,5,2,3,7,2,5,0,0,5,1,0,1,3,0,8,5,0,3,6,1,3,1,9,2,2,0,0,4,7,4,5,7,3,0,2,11,1,0,2,3,0,0,1,8,5,0,0,1,0,0,0,1,9,2,8,14,0,4,0,0,3,3,0,1,4,3,6,6,4,8,8,4,13,1,3,0 98 0.942121 0 chr18 613159 613281 + CLUL1, chr18 613128 613446 h38_mk_AluSz - 6 SRR1084842,SRR1317344,SRR1432123,SRR1439873,SRR601500,SRR814967, 19 0,0,0,3,0,0,4,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,3,0,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,4,3,0,0,0 25 0,0,0,2,1,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,5,0,0,1,0,1,0,1,0,1,0,0,0,0,0,1,0,0,0,0,4,0,0,0 86 0.176745 0 chr18 79949519 79949838 - PQLC1, chr18 79949374 79949691 h38_mk_AluSc + 1 SRR614802, 63 0,0,0,0,0,0,3,0,8,7,12,8,0,6,0,5,5,18,0,0,12,0,31,0,14,10,13,9,11,0,9,11,8,8,0,0,6,0,0,13,0,0,0,18,16,16,0,0,0,4,0,7,3,5,0,6,9,3,12,14,13,16,0,0,14,0,0,9,0,10,0,2,17,13,0,16,19,6,0,0,0,0,0,10,13,0,5,1,0,14,19,0,0,7,0,0,0,5,0,8,0,0,2,0,16,0,0,0,12,24,18,20,8,19,0,28,0 13 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,2,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0 118 0.033745 1 chr1 89020126 89020211 - GBP3, chr1 89020006 89020259 h38_mk_AluJb + 21 SRR1072367,SRR1077405,SRR1084649,SRR1316940,SRR1331579,SRR1335446,SRR1342045,SRR1360128,SRR1421177,SRR1435293,SRR1439873,SRR1442571,SRR1444622,SRR1487362,SRR1487685,SRR1498550,SRR601500,SRR613627,SRR661349,SRR818210,SRR821602, 61 5,3,2,2,0,0,0,1,1,7,2,0,0,0,1,1,6,0,2,0,1,0,0,1,1,8,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,1,0,0,1,1,0,1,0,0,1,1,2,1,2,3,0,2,1,0,1,1,2,2,1,2,0,0,0,0,0,1,1,2,0,1,0,0,0,2,1,0,48,2,1,10,0,0,0,1,3,1,0,1,1,2,0,0,4,0,0,1,0,0,0,1,3,0,1,0,0,0,1,9 63 3,3,1,0,0,1,1,0,0,2,0,2,0,1,3,0,7,0,5,1,0,1,3,0,1,7,1,0,3,0,0,0,4,0,1,0,1,0,2,0,0,1,0,1,1,0,0,0,2,0,0,0,2,1,0,4,1,1,0,1,6,2,0,3,1,2,1,0,1,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,77,3,2,7,0,1,4,2,3,2,0,1,3,0,0,0,4,2,0,1,0,0,0,2,3,2,2,1,0,2,2,8 105 0.445846 0 chr1 89020130 89020211 - GBP3, chr1 89020006 89020259 h38_mk_AluJb + 4 SRR1326179,SRR1381673,SRR1413562,SRR1447693, 13 0,2,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,8,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0 63 3,3,1,0,0,1,1,0,0,2,0,2,0,1,3,0,7,0,5,1,0,1,3,0,1,7,1,0,3,0,0,0,4,0,1,0,1,0,2,0,0,1,0,1,1,0,0,0,2,0,0,0,2,1,0,4,1,1,0,1,6,2,0,3,1,2,1,0,1,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,77,3,2,7,0,1,4,2,3,2,0,1,3,0,0,0,4,2,0,1,0,0,0,2,3,2,2,1,0,2,2,8 103 0.325659 0 chr19 10180187 10180234 - DNMT1, chr19 10180022 10180341 h38_mk_AluSz + 58 SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1318163,SRR1320115,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1342045,SRR1348159,SRR1357478,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1416477,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1435020,SRR1435775,SRR1439873,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1457482,SRR1457503,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1498550,SRR600361,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR661349,SRR662233,SRR814967,SRR818033, 94 4,2,0,6,7,3,4,2,1,4,2,1,1,0,2,1,5,6,3,0,4,1,3,0,1,3,3,0,1,3,1,5,0,0,0,4,1,6,0,4,9,5,2,3,1,3,1,2,2,1,0,3,1,1,2,3,2,3,1,3,0,1,1,3,1,2,1,0,1,1,1,0,2,2,2,2,2,2,0,5,3,2,1,9,2,2,4,0,12,0,0,0,2,4,2,20,9,1,2,2,1,7,5,16,0,0,0,0,6,5,2,0,1,4,7,5,1 97 6,1,1,4,7,2,7,4,1,3,1,2,1,0,3,0,6,2,1,1,4,1,5,1,0,4,5,0,0,0,2,4,1,2,1,2,1,3,1,3,4,1,2,1,1,1,2,0,2,1,2,4,1,2,2,0,5,4,3,3,0,2,0,4,2,0,1,0,2,1,1,0,4,5,3,2,0,1,2,4,4,1,1,3,1,1,1,1,11,1,0,0,2,2,1,17,5,1,3,2,1,1,3,0,2,3,1,0,7,1,6,3,0,4,10,3,0 118 0.306537 1 chr19 10980777 10980852 + SMARCA4, chr19 10980740 10981044 h38_mk_AluJb - 2 SRR1354446,SRR1375571, 78 0,1,1,4,1,4,3,2,3,2,3,4,0,1,3,3,2,3,0,0,1,1,3,1,2,0,2,0,5,0,1,1,0,0,0,0,0,3,1,0,2,3,1,4,4,1,5,0,1,0,0,1,2,3,1,4,6,0,1,2,2,0,1,2,1,0,0,5,0,1,1,0,1,2,0,2,0,0,0,1,0,1,1,3,0,1,0,0,0,2,2,0,2,2,0,2,3,1,0,1,1,1,1,0,3,5,3,2,1,0,0,2,0,3,3,1,0 64 2,0,2,0,0,1,1,1,0,0,1,0,0,0,2,1,1,2,0,0,1,0,0,1,2,2,0,0,4,0,1,0,0,1,2,0,0,4,0,0,0,1,2,1,0,3,3,2,0,0,0,0,0,0,0,2,0,2,2,0,2,1,0,0,1,1,1,2,3,1,2,1,3,0,0,0,2,1,0,1,1,1,0,3,0,1,0,0,6,0,2,0,0,1,2,1,3,0,1,2,1,0,1,0,3,2,0,0,2,0,2,1,0,1,5,1,0 118 0.194020 1 chr19 11554589 11554946 - ELOF1, chr19 11554646 11554986 h38_mk_AluJ + 8 SRR1085495,SRR1348360,SRR1357478,SRR1387809,SRR1447693,SRR1457482,SRR613627,SRR657635, 84 1,0,0,4,4,6,4,5,8,2,0,0,0,3,6,0,0,3,0,0,2,5,14,3,2,0,2,3,4,0,2,8,2,2,0,2,2,1,0,8,2,3,2,5,6,9,4,3,0,4,3,0,0,3,2,0,10,9,3,3,0,2,3,4,3,2,3,0,2,3,2,4,7,3,0,0,2,0,3,0,3,3,0,2,5,2,0,0,0,1,0,0,1,4,5,2,3,5,3,0,0,7,1,0,3,0,1,4,4,2,1,4,2,2,6,2,3 54 1,0,0,0,2,0,1,0,1,0,0,0,1,0,1,3,0,0,0,0,1,0,6,1,0,1,0,5,1,0,1,5,1,2,0,2,1,0,0,0,0,4,1,0,0,1,0,1,1,0,0,0,0,0,0,1,0,1,1,2,0,1,0,2,0,0,0,2,3,0,2,0,0,2,0,2,0,1,0,1,0,1,0,1,2,2,1,0,2,0,1,0,0,1,0,0,0,1,0,0,0,3,0,0,3,1,0,0,1,0,1,0,0,1,1,1,0 118 0.023680 1 chr19 11564061 11564184 + ZNF627, chr19 11564030 11564345 h38_mk_AluJo - 2 SRR1474777,SRR1487685, 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,1,0,2,0,0,1,0,2,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,2,2,0,0,0,0,0 41 0,0,3,0,0,1,1,0,0,1,0,0,0,1,2,0,0,0,0,1,1,1,1,0,1,0,0,0,0,2,1,0,0,0,1,0,3,0,0,1,0,1,0,1,0,0,0,0,0,0,1,0,0,1,0,0,1,0,1,0,2,0,0,0,0,0,0,0,2,0,0,0,0,2,3,1,2,0,0,1,0,3,2,0,2,1,2,0,2,0,0,0,0,1,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0 . . . chr19 11564445 11564492 + ZNF627, chr19 11564342 11564656 h38_mk_AluSx - 7 SRR1368772,SRR1434526,SRR1435293,SRR1447693,SRR1476571,SRR1487194,SRR601500, 41 0,0,3,0,0,1,1,0,0,1,0,0,0,1,2,0,0,0,0,1,1,1,1,0,1,0,0,0,0,2,1,0,0,0,1,0,3,0,0,1,0,1,0,1,0,0,0,0,0,0,1,0,0,1,0,0,1,0,1,0,2,0,0,0,0,0,0,0,2,0,0,0,0,2,3,1,2,0,0,1,0,3,2,0,2,1,2,0,2,0,0,0,0,1,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0 46 0,0,0,0,0,0,2,1,1,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,1,2,0,0,1,1,1,1,0,0,1,0,2,0,0,1,2,2,1,0,1,1,1,0,1,0,0,1,2,1,0,2,0,0,1,0,1,0,1,1,0,0,0,2,0,0,0,0,1,3,0,0,0,3,0,1,1,0,1,0,0,0,0,1,1,1,1,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,3,0,0,0,0,0 . . . chr19 12143001 12143132 - ZNF625, chr19 12142950 12143180 h38_mk_AluJo + 1 SRR614802, 4 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0 12 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,2,0,1,0,0,3 . . . chr19 1239364 1239526 + ATP5D, chr19 1239152 1239488 h38_mk_AluJb - 2 SRR1084842,SRR1432123, 12 0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0,0,0,1,0,5,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 15 0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,3,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 1264253 1264463 + CIRBP, chr19 1264061 1264356 h38_mk_AluJo - 12 SRR1317344,SRR1328895,SRR1341365,SRR1341763,SRR1348360,SRR1357478,SRR1432123,SRR1434526,SRR1437538,SRR1453851,SRR1455925,SRR602704, 31 0,0,2,0,2,0,0,0,0,0,9,0,0,3,0,10,0,9,0,0,1,0,0,3,8,0,1,2,0,0,0,15,0,4,0,0,8,0,0,0,0,0,1,0,0,0,3,0,0,8,0,0,0,0,0,0,10,0,11,0,0,0,5,0,0,0,0,2,2,0,2,0,15,0,0,0,0,0,4,0,0,10,0,0,0,2,0,0,0,0,0,0,2,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,6,0 96 0,0,1,29,2,3,0,4,15,3,18,14,8,10,6,7,2,8,0,0,8,6,44,17,12,14,8,6,26,5,7,20,7,25,4,11,12,22,0,14,8,3,7,22,11,12,13,2,3,14,4,6,5,8,5,2,20,3,29,14,6,15,11,15,13,8,0,1,3,5,14,0,45,3,4,15,8,17,4,27,11,13,2,4,15,0,2,0,0,5,15,0,3,9,0,4,11,0,0,4,0,0,0,0,28,13,5,6,16,9,30,18,0,36,15,24,0 106 0.470529 0 chr19 12892116 12892434 + GCDH, chr19 12892265 12892601 h38_mk_AluSx - 2 SRR1402900,SRR657754, 117 46,11,63,48,22,41,32,45,57,98,43,35,60,66,61,32,38,38,17,10,34,56,202,34,47,22,41,19,41,62,80,31,15,36,25,40,43,36,45,42,48,70,26,59,31,75,52,43,72,40,27,31,23,37,36,39,45,29,43,50,45,14,46,39,67,45,56,24,59,46,51,35,37,76,61,58,152,27,64,33,28,58,82,49,62,32,117,32,115,46,50,2,49,41,48,25,58,41,46,71,7,21,17,26,90,78,34,56,44,96,35,34,20,57,49,34,40 68 1,0,2,0,1,1,1,3,2,3,0,0,0,3,1,0,0,0,0,1,0,1,9,0,4,0,2,0,0,0,0,3,0,0,0,1,1,1,0,0,1,6,1,6,0,2,0,0,2,3,0,0,1,1,0,0,2,1,3,0,0,1,2,1,3,0,2,0,0,2,1,0,0,1,1,2,14,1,2,0,1,2,1,3,0,1,2,2,2,1,1,1,0,3,0,0,2,0,0,3,0,1,1,0,7,5,0,0,1,8,0,0,1,0,2,2,1 . . . chr19 12892317 12892434 + GCDH, chr19 12892265 12892601 h38_mk_AluSx - 5 SRR1341763,SRR1390601,SRR1474553,SRR602704,SRR661973, 36 0,0,3,0,0,0,0,0,1,0,0,1,0,0,1,0,0,2,1,0,0,0,4,1,2,0,1,0,0,1,0,0,0,0,0,0,0,1,0,3,0,1,0,1,0,0,0,1,2,0,0,0,2,0,1,0,0,0,1,0,0,1,1,0,1,0,0,0,0,0,0,0,0,2,1,0,2,0,1,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,1,0,1,0,0,0,0,0,1,0,1,0,0,0,0,6,0,0,0,0,0,0,0 68 1,0,2,0,1,1,1,3,2,3,0,0,0,3,1,0,0,0,0,1,0,1,9,0,4,0,2,0,0,0,0,3,0,0,0,1,1,1,0,0,1,6,1,6,0,2,0,0,2,3,0,0,1,1,0,0,2,1,3,0,0,1,2,1,3,0,2,0,0,2,1,0,0,1,1,2,14,1,2,0,1,2,1,3,0,1,2,2,2,1,1,1,0,3,0,0,2,0,0,3,0,1,1,0,7,5,0,0,1,8,0,0,1,0,2,2,1 . . . chr19 12892387 12892434 + GCDH, chr19 12892265 12892601 h38_mk_AluSx - 1 SRR1348159, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 68 1,0,2,0,1,1,1,3,2,3,0,0,0,3,1,0,0,0,0,1,0,1,9,0,4,0,2,0,0,0,0,3,0,0,0,1,1,1,0,0,1,6,1,6,0,2,0,0,2,3,0,0,1,1,0,0,2,1,3,0,0,1,2,1,3,0,2,0,0,2,1,0,0,1,1,2,14,1,2,0,1,2,1,3,0,1,2,2,2,1,1,1,0,3,0,0,2,0,0,3,0,1,1,0,7,5,0,0,1,8,0,0,1,0,2,2,1 118 0.032948 1 chr19 12911000 12911114 + GCDH, chr19 12910972 12911271 h38_mk_AluJ - 5 SRR1356619,SRR1357478,SRR1360563,SRR1418837,SRR1487194, 43 1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0,0,0,2,0,0,1,5,2,0,1,0,2,1,0,0,4,2,0,0,0,0,1,0,0,0,1,3,1,1,1,3,0,0,1,1,1,0,0,0,3,0,3,2,0,0,2,0,0,1,0,0,4,0,1,0,2,0,0,0,0,1,0,1,1,3,2,0,0,0,0,4,0,0,0,0,2,0,0,0,0,7,0,0,0,0,0,3,0,0,3,1,0,0 17 1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,2,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0 72 0.509606 0 chr19 1517402 1517519 + PLK5, chr19 1517355 1517686 h38_mk_AluJb - 1 SRR1315970, 6 0,0,0,0,1,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 27 1,0,4,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,3,0,0,0,0,0,0,3,1,1,2,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,3,1,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,4,0,0 . . . chr19 1517472 1517519 + PLK5, chr19 1517355 1517686 h38_mk_AluJb - 1 SRR1455925, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 27 1,0,4,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,3,0,0,0,0,0,0,3,1,1,2,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,3,1,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,4,0,0 . . . chr19 17215225 17215507 + USE1, chr19 17215121 17215256 h38_mk_AluJ - 2 SRR1435020,SRR1487362, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 107,79,138,179,81,97,116,159,145,245,158,102,92,127,144,101,132,143,58,54,145,97,486,121,157,94,131,79,186,92,93,281,50,172,83,156,221,115,64,170,169,147,108,158,142,105,185,129,88,159,103,78,95,90,102,89,185,125,100,195,161,153,147,253,219,75,59,116,137,99,213,136,213,147,64,163,172,118,136,142,91,197,112,167,193,96,84,63,139,97,194,16,147,107,60,203,140,109,154,128,7,99,67,126,208,103,70,61,124,80,220,120,99,213,171,174,67 . . . chr19 17258212 17258472 - USHBP1, chr19 17258417 17258748 h38_mk_AluSx + 1 SRR1077405, 115 7,35,9,8,7,7,4,6,6,20,10,11,6,1,7,2,18,4,10,5,7,7,17,10,16,33,10,5,2,12,10,9,4,6,9,1,9,5,8,6,11,16,2,2,7,9,9,7,5,9,7,5,14,11,4,4,19,3,8,8,3,11,9,15,24,8,1,0,14,6,11,6,2,6,2,8,10,10,0,13,7,9,7,6,13,6,16,5,10,5,18,3,12,1,2,5,18,21,7,8,1,7,9,12,19,29,4,5,5,14,9,7,1,10,5,12,15 1 0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 17258584 17258701 - USHBP1, chr19 17258417 17258748 h38_mk_AluSx + 42 SRR1084649,SRR1099499,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1335446,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1356619,SRR1360563,SRR1367943,SRR1381673,SRR1387264,SRR1387809,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416754,SRR1432123,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1440986,SRR1447693,SRR1454803,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR604456,SRR613627,SRR614802,SRR661973,SRR818210, 80 1,1,3,0,0,1,1,0,2,4,1,5,0,1,5,0,1,1,3,1,3,1,6,0,3,4,1,0,1,0,1,1,0,2,2,1,0,0,2,0,2,2,1,0,1,3,5,1,2,3,0,1,3,2,1,3,3,1,1,1,0,2,1,1,2,0,2,0,4,1,0,2,0,0,1,0,1,1,0,2,4,1,0,1,2,0,2,1,1,0,1,0,2,0,0,0,1,2,1,0,0,2,2,0,6,2,0,0,1,7,6,2,0,0,0,1,2 95 0,11,5,5,1,1,0,0,4,3,2,5,0,2,1,1,5,1,2,1,6,3,4,4,3,14,2,2,5,3,2,1,0,3,3,7,0,1,1,4,3,6,0,0,0,6,5,3,3,7,4,1,6,2,1,1,6,2,3,3,1,1,2,7,5,1,3,1,2,0,4,1,2,0,0,2,2,4,0,6,1,3,2,1,9,2,2,0,1,2,6,0,4,1,0,1,7,4,3,1,0,2,1,0,1,4,2,1,0,4,0,1,0,2,0,3,5 112 0.591238 0 chr19 17571870 17571991 + COLGALT1, chr19 17571822 17572040 h38_mk_AluJ - 4 SRR1085495,SRR1341365,SRR1453341,SRR613627, 29 0,0,1,1,1,1,0,0,0,3,0,0,0,0,0,1,0,1,2,0,0,0,0,2,1,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,2,2,2,1,0,2,2,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,4,1,0,1,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0 5 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 0.022079 0 chr1 91800959 91801055 - TGFBR3, chr1 91800793 91801110 h38_mk_AluSq2 + 2 SRR1340508,SRR1432123, 14 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,3,1,0,0,0,0,2 56 0,0,0,1,0,0,0,1,1,0,0,0,1,1,2,1,2,1,0,0,2,2,3,0,1,0,1,2,1,1,2,0,0,0,0,0,0,0,0,2,1,0,0,1,1,0,1,1,0,1,2,0,0,0,1,0,3,1,0,0,0,0,0,1,1,1,0,0,4,1,0,0,1,2,0,0,0,1,0,0,1,1,1,0,1,0,2,1,1,2,2,0,0,0,0,3,0,1,0,0,0,0,1,0,4,0,0,0,1,3,1,1,0,0,2,1,0 108 0.308779 0 chr19 19037552 19037707 + ARMC6, chr19 19037359 19037642 h38_mk_AluJb - 1 SRR1415234, 12 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,1,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 68 0,0,1,0,1,1,2,1,1,1,0,1,0,1,1,1,1,2,1,0,0,0,0,0,1,2,3,0,1,0,1,2,1,1,0,1,2,0,1,4,1,0,1,1,1,3,0,1,0,0,1,2,0,1,0,2,3,1,2,1,3,1,0,1,1,0,0,0,0,1,1,0,2,0,0,1,0,0,0,4,0,0,0,3,2,3,3,0,0,0,1,0,0,0,0,0,4,1,1,0,0,1,0,3,2,1,1,0,0,2,3,1,0,3,1,4,0 . . . chr19 19157025 19157283 - BORCS8-MEF2B, chr19 19156885 19157113 h38_mk_AluJ4 + 2 SRR1498550,SRR661973, 39 0,0,1,0,0,2,0,3,0,0,1,0,2,0,1,0,3,0,0,0,2,1,0,0,0,1,0,2,0,2,3,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,1,0,0,2,2,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,1,1,0,1,2,0,1,0,0,0,0,0,1,1,0,1,0,1,0,0,1,3,0,1,0,0,1,0,2,0,0,0,0,0,0,0,4,0,0,1,0,0,0,0 36 0,0,0,0,1,0,0,0,0,2,0,0,0,0,1,0,0,2,0,1,0,1,1,0,0,0,1,0,0,0,0,0,0,1,0,0,1,2,0,0,0,2,0,1,0,0,0,0,1,0,0,2,0,1,0,2,2,2,0,0,1,0,1,0,2,0,1,0,0,0,0,2,0,2,0,0,1,0,0,0,0,1,1,1,0,0,0,0,4,0,0,0,0,0,0,2,0,0,1,1,0,2,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0 117 0.116722 0 chr19 19157025 19157142 - BORCS8-MEF2B,MEF2B, chr19 19156885 19157113 h38_mk_AluJ4 + 4 SRR1342045,SRR1433796,SRR1498550,SRR602314, 39 0,0,1,0,0,2,0,3,0,0,1,0,2,0,1,0,3,0,0,0,2,1,0,0,0,1,0,2,0,2,3,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,1,0,0,2,2,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,1,1,0,1,2,0,1,0,0,0,0,0,1,1,0,1,0,1,0,0,1,3,0,1,0,0,1,0,2,0,0,0,0,0,0,0,4,0,0,1,0,0,0,0 22 0,0,0,0,0,0,0,0,0,3,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,3,1,0,0,0,0,0,0,0,0,2,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,2,0,0,0,1,0,0,1,0,0,0,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,0,0,3,0,0,0,0,0,0,2,0,1 117 0.100325 0 chr19 2233531 2233905 - PLEKHJ1, chr19 2233581 2233768 h38_mk_AluJb + 11 SRR1316940,SRR1317344,SRR1367943,SRR1408208,SRR1414897,SRR1435293,SRR1440986,SRR1464373,SRR1498550,SRR600361,SRR657127, 33 0,0,0,0,0,0,0,1,0,2,2,1,0,0,0,1,1,0,1,1,0,0,0,0,0,0,2,0,0,3,0,0,1,0,0,2,0,0,0,1,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,2,0,1,1,1,3,0,0,0,5,0,0,0,0,0,2,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,3,0,0,1,0,0,0,1,0,0,0,1,9,0,0,0,0,2,0,3,0,0,0,0,0 117 108,65,228,283,124,146,201,273,269,299,211,145,173,186,268,176,230,270,91,70,195,132,830,211,230,154,282,179,273,145,238,344,111,288,133,238,337,182,110,329,259,234,189,247,236,274,318,153,146,203,96,193,141,162,158,181,295,89,176,286,230,198,259,343,301,101,126,120,183,169,255,276,318,156,117,205,290,295,182,189,193,284,155,243,282,225,139,120,195,129,289,22,173,191,132,242,205,133,173,165,11,169,76,132,397,206,101,129,226,185,407,271,132,306,311,281,93 118 0.985945 1 chr19 23338727 23338887 - ZNF91, chr19 23338762 23339082 h38_mk_AluSc + 1 SRR1474777, 53 0,0,0,4,6,4,4,3,1,0,7,2,0,0,0,1,0,4,0,0,2,0,0,0,4,0,4,0,3,0,0,0,1,0,0,2,0,5,0,0,0,1,2,0,0,0,5,1,0,0,0,1,1,0,0,2,0,0,0,0,3,2,0,2,1,0,0,0,0,0,3,1,6,0,0,2,0,0,0,0,0,2,1,4,2,2,0,0,0,0,2,0,0,0,10,3,4,1,0,3,0,6,2,0,0,12,0,0,4,2,3,3,0,14,5,3,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 73 0.551969 0 chr19 23338727 23339054 - ZNF91, chr19 23338762 23339082 h38_mk_AluSc + 28 SRR1315970,SRR1317344,SRR1318163,SRR1333741,SRR1348159,SRR1367943,SRR1375571,SRR1387809,SRR1435775,SRR1439873,SRR1440986,SRR1453851,SRR1454803,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR661349,SRR661973,SRR662534,SRR814967,SRR818033, 53 0,0,0,4,6,4,4,3,1,0,7,2,0,0,0,1,0,4,0,0,2,0,0,0,4,0,4,0,3,0,0,0,1,0,0,2,0,5,0,0,0,1,2,0,0,0,5,1,0,0,0,1,1,0,0,2,0,0,0,0,3,2,0,2,1,0,0,0,0,0,3,1,6,0,0,2,0,0,0,0,0,2,1,4,2,2,0,0,0,0,2,0,0,0,10,3,4,1,0,3,0,6,2,0,0,12,0,0,4,2,3,3,0,14,5,3,0 94 7,0,4,0,1,0,1,1,2,2,3,1,2,2,2,3,5,2,4,1,1,2,4,1,1,3,2,0,0,1,2,0,1,4,1,1,7,1,3,0,1,2,1,2,3,1,1,2,5,1,3,0,0,1,2,2,2,0,5,2,0,3,3,3,4,1,5,1,4,1,2,1,0,0,6,1,4,1,2,1,0,1,3,5,2,1,1,3,3,1,0,1,4,0,2,6,1,2,0,3,0,3,0,0,4,1,4,0,3,3,1,2,0,2,6,0,1 110 0.768444 0 chr19 24048937 24049014 + AC092279.1, chr19 24048752 24049059 h38_mk_AluJb - 24 SRR1084649,SRR1102055,SRR1326179,SRR1333741,SRR1336548,SRR1340508,SRR1341365,SRR1342045,SRR1356619,SRR1357478,SRR1368772,SRR1390601,SRR1432123,SRR1433796,SRR1455925,SRR1468514,SRR1471943,SRR1474777,SRR1498550,SRR604262,SRR607337,SRR661349,SRR661973,SRR662233, 62 2,0,2,0,0,1,2,0,0,0,0,2,0,1,2,3,0,2,1,1,0,4,3,2,0,2,2,1,0,1,2,6,0,0,1,0,2,0,0,0,2,0,0,2,3,1,6,2,0,0,0,1,1,0,0,1,1,5,1,0,2,2,0,1,0,0,0,0,1,0,5,1,5,2,0,0,1,0,0,3,0,2,0,5,0,0,0,0,6,0,4,0,2,0,2,2,3,1,1,1,0,1,0,0,0,3,0,0,1,6,6,4,0,0,0,2,0 47 0,0,1,0,3,1,3,1,0,0,5,0,0,0,2,0,0,1,0,3,4,0,1,2,2,1,0,1,0,0,1,6,0,2,0,1,4,0,0,0,0,4,2,1,0,0,0,0,1,1,0,0,0,0,2,0,3,1,1,4,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,2,1,1,0,3,1,2,0,0,2,4,0,0,2,2,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,3,7,1,0,0,4,0,0,0 99 0.521382 0 chr19 24091901 24092015 + ZNF254, chr19 24091872 24092181 h38_mk_AluY - 9 SRR1335446,SRR1340508,SRR1348159,SRR1386708,SRR1432123,SRR1434526,SRR1474777,SRR1487685,SRR661349, 43 0,1,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,1,0,1,1,3,0,1,0,1,0,1,1,0,0,0,0,1,0,0,0,0,2,0,1,0,0,1,0,1,0,1,0,0,1,0,0,0,1,1,0,1,1,0,1,0,0,1,0,0,0,0,0,0,0,1,1,1,2,0,0,1,1,1,2,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,1,1,1,0,0,0,0,0,0,2,1,0,0,1,1,0,0,4 74 1,0,4,0,0,2,2,1,1,2,2,1,2,0,1,0,0,2,1,0,0,1,5,2,0,2,2,0,1,0,5,1,0,1,1,0,1,0,0,1,5,3,0,1,0,4,1,0,0,2,0,1,0,0,3,2,1,1,2,0,1,0,0,2,2,1,0,2,0,2,2,0,4,1,2,1,2,2,0,0,1,2,0,4,2,2,1,0,0,4,0,0,1,1,0,1,1,1,1,3,0,0,1,0,2,0,2,0,2,2,6,2,2,3,0,3,0 106 0.546983 0 chr19 29012511 29012647 + LINC01532, chr19 29012285 29012609 h38_mk_AluJo - 7 SRR1320115,SRR1337412,SRR1361567,SRR1414897,SRR1457503,SRR1487194,SRR662534, 108 3,2,5,7,2,3,1,4,12,7,5,6,7,9,11,3,7,6,0,6,8,5,15,4,8,3,6,5,5,3,7,5,2,2,13,4,10,8,7,9,3,5,4,6,5,14,2,10,19,8,6,7,10,11,8,0,3,11,6,13,14,4,6,12,10,0,6,10,10,3,13,2,7,9,15,7,4,6,31,5,6,7,21,13,13,2,11,18,37,11,10,0,8,6,5,0,3,14,2,8,4,1,1,0,19,0,0,3,4,0,18,8,2,2,1,3,11 8 0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 . . . chr19 3205832 3206026 + NCLN, chr19 3205803 3205873 h38_mk_AluY5 - 6 SRR1341365,SRR1390601,SRR1418837,SRR1454803,SRR1498550,SRR602516, 19 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,4,0,0,1,0,0,1,2,0,0,0,2,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,3,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,2,2,1,2,0,0,0,0,2,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 21,8,57,101,50,57,52,75,55,40,70,33,35,42,68,46,98,43,16,21,58,23,181,36,47,38,62,51,55,48,56,88,24,51,40,42,45,45,15,79,58,64,37,60,78,58,65,20,39,39,25,53,33,38,44,41,87,40,48,54,38,43,52,83,78,23,15,30,43,55,46,44,88,34,16,63,92,55,12,66,47,75,20,80,91,55,37,12,40,31,78,9,59,58,50,67,101,32,50,44,5,69,29,35,128,76,29,39,73,83,112,72,32,99,99,89,36 . . . chr19 32399751 32399868 - AC007773.1, chr19 32399590 32399905 h38_mk_AluJb + 4 SRR1340508,SRR1348360,SRR607337,SRR662233, 27 0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,7,0,1,0,0,3,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,1,0,0,1,0,0,1,0,0,1,0,1,0,0,0,0,0,1,1,1,1,0,0,2,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0 63 0,0,0,2,1,0,0,0,1,0,0,0,0,0,1,1,0,2,0,0,0,1,4,0,3,0,4,2,1,2,0,3,0,0,1,1,2,1,0,2,1,2,1,0,2,1,3,1,0,0,0,2,1,1,0,2,0,3,1,2,0,0,3,0,1,0,0,0,0,1,1,1,1,2,1,1,2,0,1,1,0,1,1,1,1,1,1,2,0,0,0,0,0,0,1,3,0,0,0,2,0,1,0,0,0,2,0,0,0,0,2,1,2,2,0,5,2 . . . chr1 93309674 93309790 - CCDC18-AS1, chr1 93309508 93309836 h38_mk_AluSz6 + 1 SRR1387809, 12 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,3,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 . . . chr19 34430093 34430186 + UBA2, chr19 34429914 34430216 h38_mk_AluJb - 109 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 114 10,17,7,18,7,4,7,8,3,8,10,8,10,9,8,14,6,5,6,4,12,5,47,4,13,12,14,3,14,7,7,4,8,3,4,25,14,11,2,9,16,18,15,12,2,9,9,12,7,4,17,10,3,6,5,12,11,8,8,9,9,5,1,14,5,1,7,4,7,3,11,1,15,7,2,13,13,5,4,9,8,12,4,8,15,8,2,0,12,4,12,3,5,14,3,8,18,5,9,6,1,7,6,0,31,6,7,3,15,26,23,15,0,23,14,19,6 115 12,22,11,26,12,12,23,6,9,8,15,18,14,9,16,17,12,15,8,5,17,9,53,5,18,20,18,10,18,6,12,3,7,6,7,27,17,20,5,24,38,19,20,20,9,20,12,8,16,12,31,9,5,14,9,10,19,12,16,17,24,5,2,28,14,6,10,10,18,9,19,3,28,13,5,21,27,8,14,19,13,14,12,10,30,20,7,1,17,6,28,1,18,23,8,14,35,14,22,22,4,14,11,0,19,18,3,0,13,25,26,19,2,40,34,34,14 118 0.427098 1 chr19 35099198 35099387 - HPN-AS1, chr19 35099315 35099418 h38_mk_AluJb + 8 SRR1072367,SRR1317344,SRR1348159,SRR1360563,SRR1415234,SRR1433796,SRR1453341,SRR818033, 9 1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 106 77,14,3,3,3,8,14,15,2,60,3,10,10,3,10,5,7,0,11,2,3,19,17,16,4,0,6,0,1,2,0,4,3,3,0,5,9,2,1,3,12,17,0,2,31,0,6,4,17,2,52,3,1,1,5,2,10,119,6,9,14,3,10,1,7,4,3,6,22,21,23,16,2,6,1,7,2,5,26,7,4,3,9,5,9,4,4,2,15,2,11,0,16,5,0,0,5,3,8,7,0,4,4,61,14,10,1,1,9,11,9,8,7,20,75,5,2 115 0.671871 0 chr19 35099205 35099387 - HPN-AS1, chr19 35099315 35099418 h38_mk_AluJb + 34 SRR1072367,SRR1077405,SRR1102055,SRR1314163,SRR1316940,SRR1318163,SRR1320963,SRR1331579,SRR1335446,SRR1337412,SRR1340508,SRR1341365,SRR1368772,SRR1387809,SRR1399779,SRR1413562,SRR1415234,SRR1433796,SRR1434526,SRR1437538,SRR1447693,SRR1453851,SRR1454803,SRR1457482,SRR1464373,SRR1471817,SRR1474553,SRR1476571,SRR1487194,SRR1498550,SRR607337,SRR614802,SRR814967,SRR818033, 53 20,3,0,0,0,0,4,2,1,8,0,4,0,1,1,0,2,1,1,1,2,2,1,9,0,1,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,3,0,0,0,3,0,9,0,0,0,1,0,0,9,2,0,0,0,2,0,0,0,1,1,1,1,1,2,2,2,0,1,0,0,4,1,2,0,1,0,4,0,0,0,3,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,1,0,1,0,0,0,1,0,1,14,0,1 106 77,14,3,3,3,8,14,15,2,60,3,10,10,3,10,5,7,0,11,2,3,19,17,16,4,0,6,0,1,2,0,4,3,3,0,5,9,2,1,3,12,17,0,2,31,0,6,4,17,2,52,3,1,1,5,2,10,119,6,9,14,3,10,1,7,4,3,6,22,21,23,16,2,6,1,7,2,5,26,7,4,3,9,5,9,4,4,2,15,2,11,0,16,5,0,0,5,3,8,7,0,4,4,61,14,10,1,1,9,11,9,8,7,20,75,5,2 116 0.687907 0 chr19 35099243 35099387 - HPN-AS1, chr19 35099315 35099418 h38_mk_AluJb + 15 SRR1072367,SRR1077405,SRR1316940,SRR1360128,SRR1387264,SRR1433796,SRR1435293,SRR1440986,SRR1447693,SRR1471817,SRR1485459,SRR1487362,SRR600361,SRR658307,SRR661973, 21 2,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,2,0,2,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,4,0,0,0,0,1,1,2,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,2,0,0 106 77,14,3,3,3,8,14,15,2,60,3,10,10,3,10,5,7,0,11,2,3,19,17,16,4,0,6,0,1,2,0,4,3,3,0,5,9,2,1,3,12,17,0,2,31,0,6,4,17,2,52,3,1,1,5,2,10,119,6,9,14,3,10,1,7,4,3,6,22,21,23,16,2,6,1,7,2,5,26,7,4,3,9,5,9,4,4,2,15,2,11,0,16,5,0,0,5,3,8,7,0,4,4,61,14,10,1,1,9,11,9,8,7,20,75,5,2 115 0.678140 0 chr19 35743155 35743345 - AD000671.2,IGFLR1,U2AF1L4, chr19 35743081 35743413 h38_mk_AluSq2 + 117 SRR1077405,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1487194,SRR1488651,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR1381673,SRR1072367,SRR1085495,SRR1314163,SRR1331579,SRR1335446,SRR1337412,SRR1360128,SRR1442571,SRR1444622,SRR1485459,SRR1487362,SRR1487685,SRR1498550,SRR821602, 117 8,7,39,41,7,16,15,20,29,31,15,14,12,28,47,16,21,13,9,7,15,15,78,39,22,17,27,22,36,22,23,58,11,34,20,11,50,18,9,34,25,20,5,27,24,24,27,14,17,19,26,33,23,28,16,11,26,18,27,21,24,23,33,23,23,12,11,13,44,30,20,17,25,22,19,14,31,34,12,19,8,27,18,24,25,41,17,23,34,13,35,4,17,23,9,26,30,18,11,29,3,16,9,19,51,41,18,10,15,28,41,27,24,34,24,39,22 117 15,6,37,34,3,20,18,26,28,35,16,13,16,22,39,20,24,20,17,6,17,18,84,43,30,8,8,17,33,29,32,26,17,23,17,20,12,17,16,39,10,33,16,21,27,27,37,24,15,26,34,25,12,22,24,16,44,15,22,21,24,16,39,29,35,18,16,9,19,38,30,29,39,20,19,12,33,23,15,21,14,34,16,10,26,42,16,10,23,11,22,1,23,12,19,13,24,19,19,23,2,11,12,3,30,21,18,11,24,32,50,18,19,23,40,23,16 118 0.501273 1 chr19 35743155 35743370 - IGFLR1,U2AF1L4, chr19 35743081 35743413 h38_mk_AluSq2 + 3 SRR1084649,SRR1341365,SRR1487685, 117 8,7,39,41,7,16,15,20,29,31,15,14,12,28,47,16,21,13,9,7,15,15,78,39,22,17,27,22,36,22,23,58,11,34,20,11,50,18,9,34,25,20,5,27,24,24,27,14,17,19,26,33,23,28,16,11,26,18,27,21,24,23,33,23,23,12,11,13,44,30,20,17,25,22,19,14,31,34,12,19,8,27,18,24,25,41,17,23,34,13,35,4,17,23,9,26,30,18,11,29,3,16,9,19,51,41,18,10,15,28,41,27,24,34,24,39,22 6 0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 118 0.343988 1 chr19 36320644 36320760 - LINC00665, chr19 36320469 36320802 h38_mk_AluY + 6 SRR1084649,SRR1085495,SRR1386708,SRR1413562,SRR1464373,SRR1474777, 6 0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 114 8,4,9,11,5,7,14,3,6,9,10,6,5,5,19,11,12,13,3,1,9,7,21,9,10,3,13,7,6,11,6,6,3,7,9,5,11,8,1,5,7,6,8,13,12,8,14,2,6,13,11,7,7,2,10,7,13,4,15,11,6,8,5,10,14,2,5,8,9,3,11,6,6,8,4,9,19,13,9,5,9,9,6,6,15,10,4,0,6,6,12,3,8,17,4,7,7,7,9,5,3,9,5,0,18,7,2,5,9,16,7,8,0,14,16,12,6 118 0.275936 1 chr19 36322130 36322225 - LINC00665, chr19 36322111 36322420 h38_mk_AluSx1 + 112 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 116 7,2,8,16,10,12,16,10,12,8,6,7,13,13,8,14,8,13,3,3,13,2,35,10,10,5,15,9,11,11,13,21,4,14,6,12,7,5,5,16,8,15,6,15,14,5,22,2,3,19,11,18,11,8,9,6,19,8,11,21,10,8,16,26,14,10,6,5,13,6,15,13,17,10,3,16,18,16,11,10,7,23,7,10,16,6,6,5,10,16,17,1,12,25,12,9,12,5,10,7,1,13,10,20,29,15,0,14,17,25,12,17,16,12,15,38,10 114 3,3,4,15,8,8,7,2,16,5,4,9,8,8,4,6,5,9,3,2,12,1,35,2,14,3,6,13,9,8,10,6,6,8,9,6,2,12,5,11,10,13,8,25,7,12,21,2,6,10,3,9,11,5,5,3,16,3,5,9,12,7,10,15,14,10,2,6,10,5,7,9,28,2,9,5,15,12,8,13,6,10,0,4,15,5,9,2,7,10,7,1,4,11,6,7,8,1,9,7,0,3,4,20,17,9,5,9,5,13,6,22,8,5,13,21,0 118 0.650779 1 chr19 36517286 36517393 - ZNF260, chr19 36517114 36517417 h38_mk_AluJ4 + 1 SRR1468514, 2 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 4 0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 102 0.027638 0 chr19 36577141 36577237 + ZNF529-AS1, chr19 36576936 36577269 h38_mk_AluJb - 40 SRR1077405,SRR1084842,SRR1102055,SRR1317344,SRR1320963,SRR1326179,SRR1340508,SRR1341763,SRR1354446,SRR1367943,SRR1381673,SRR1387264,SRR1408208,SRR1415234,SRR1416754,SRR1418127,SRR1421177,SRR1435020,SRR1439873,SRR1440986,SRR1444622,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR595926,SRR602314,SRR604262,SRR613627,SRR657635,SRR658307,SRR661349,SRR662233, 62 3,1,0,4,0,0,1,0,1,1,2,0,0,4,2,1,0,0,0,0,2,2,11,0,1,0,0,0,2,0,0,0,0,3,1,1,0,2,3,0,5,0,0,3,2,0,4,2,0,0,4,0,1,1,0,1,0,0,2,1,0,0,0,5,2,0,1,0,0,4,2,2,3,0,2,0,2,0,3,1,1,0,0,2,10,1,6,1,0,0,3,0,2,0,2,0,0,5,0,0,0,2,0,0,1,0,0,2,1,0,6,1,3,0,5,2,1 79 0,1,1,2,1,0,4,0,1,0,1,1,0,1,3,0,1,2,0,1,1,0,2,0,4,0,2,1,3,0,5,1,1,0,0,3,2,0,4,5,4,4,2,0,0,5,3,0,2,2,2,0,2,1,1,1,1,1,1,1,1,0,0,3,1,1,2,1,2,2,3,2,5,1,1,1,1,1,0,1,2,0,0,1,2,5,1,0,0,0,2,2,1,2,3,0,1,2,1,0,0,2,0,0,4,0,0,1,1,0,1,1,0,0,2,0,0 116 0.379193 0 chr19 36577141 36577283 + ZNF529-AS1, chr19 36576936 36577269 h38_mk_AluJb - 26 SRR1072367,SRR1084842,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1340508,SRR1341763,SRR1354446,SRR1387264,SRR1390601,SRR1408208,SRR1416754,SRR1439873,SRR1440986,SRR1444622,SRR1455925,SRR1468514,SRR1471943,SRR595926,SRR602314,SRR613627,SRR657635,SRR662233,SRR662534,SRR818033, 62 3,1,0,4,0,0,1,0,1,1,2,0,0,4,2,1,0,0,0,0,2,2,11,0,1,0,0,0,2,0,0,0,0,3,1,1,0,2,3,0,5,0,0,3,2,0,4,2,0,0,4,0,1,1,0,1,0,0,2,1,0,0,0,5,2,0,1,0,0,4,2,2,3,0,2,0,2,0,3,1,1,0,0,2,10,1,6,1,0,0,3,0,2,0,2,0,0,5,0,0,0,2,0,0,1,0,0,2,1,0,6,1,3,0,5,2,1 66 1,0,3,3,1,0,1,1,1,1,2,1,1,0,0,0,0,0,0,0,0,1,5,0,3,1,0,1,1,1,1,3,0,2,0,0,2,1,2,1,4,0,0,3,1,7,2,1,1,3,0,0,1,0,1,0,2,0,0,0,2,1,0,1,5,0,1,0,0,0,0,0,1,4,0,1,1,0,0,1,1,1,2,0,0,1,0,0,1,2,1,0,0,2,1,1,1,0,1,0,0,3,0,0,13,0,1,1,2,0,5,3,0,0,2,0,0 115 0.353870 0 chr19 37224818 37224939 + ZNF383, chr19 37224789 37225103 h38_mk_AluS - 47 SRR1072367,SRR1099499,SRR1102055,SRR1314163,SRR1318163,SRR1320115,SRR1326179,SRR1331579,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1356619,SRR1360128,SRR1386708,SRR1399779,SRR1408208,SRR1408368,SRR1421177,SRR1432123,SRR1435293,SRR1439873,SRR1444622,SRR1444678,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR602314,SRR602516,SRR602704,SRR614802,SRR657635,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 77 3,0,3,0,0,1,1,1,1,2,0,3,2,1,1,1,3,0,2,1,2,0,2,0,3,2,4,0,1,2,1,0,2,2,1,1,0,2,0,2,0,0,2,1,1,0,4,1,0,0,2,2,1,1,1,3,2,0,0,1,4,0,1,4,0,0,1,2,0,1,0,0,3,0,3,5,1,0,0,0,3,4,2,4,2,0,3,0,1,1,4,0,2,1,1,5,3,1,1,2,0,1,1,0,1,0,0,0,0,0,5,5,0,3,2,4,0 108 6,3,2,2,4,4,4,3,1,5,2,5,1,1,4,1,7,1,3,1,5,4,4,3,5,10,4,0,0,4,5,4,4,6,2,1,3,2,5,4,2,0,1,2,9,2,7,7,6,2,3,3,0,2,3,2,5,5,1,3,6,1,0,5,3,3,2,2,0,3,3,1,5,0,2,13,5,1,1,4,3,3,3,6,5,5,2,1,7,2,5,1,3,2,1,6,9,4,4,2,1,4,7,0,9,9,6,2,3,5,3,6,0,6,6,8,2 114 0.847644 0 chr19 37324796 37324936 + HKR1, chr19 37324762 37325086 h38_mk_AluYm1 - 1 SRR1453851, 37 2,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,2,1,0,2,1,4,0,0,1,0,2,0,0,0,0,3,0,1,0,0,0,0,2,0,0,0,0,0,2,1,0,0,1,0,0,0,0,4,0,0,0,2,3,2,0,0,2,3,0,0,0,0,0,3,0,0,0,0,0,2,0,0,2,0,2,0,0,0,0,0,0,0,2,0,0,1,0,0,2,2,0,3,1,0,0,0,0,0,6,0,0,0,3,4,4,0,0,0,1,0 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1 . . . chr19 37689064 37689160 - ZFP30,ZNF781, chr19 37688898 37689216 h38_mk_AluJ4 + 6 SRR1416477,SRR1471817,SRR595926,SRR661349,SRR1340508,SRR1468514, 21 0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,2,0,0,2,1,0,1,1,0,0,0,0,0,0,0,1,0,1,1,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0 22 0,0,0,2,1,0,0,0,1,1,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,2,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,1,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,0,0,0,0,1,0 117 0.048887 0 chr19 37689092 37689160 - ZFP30, chr19 37688898 37689216 h38_mk_AluJ4 + 1 SRR1414897, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 22 0,0,0,2,1,0,0,0,1,1,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,2,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,1,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,0,0,0,0,1,0 117 0.035059 0 chr19 37758476 37758596 - ZNF573, chr19 37758309 37758636 h38_mk_AluSx + 2 SRR1348159,SRR1464373, 15 1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 24 0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,1,1,0,0,0,1,1,0,1,2,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,3,0,0,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0 . . . chr19 37770407 37770597 - ZNF573, chr19 37770473 37770790 h38_mk_AluJo + 1 SRR662233, 23 0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,1,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,1,1,0,0 38 1,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,1,1,1,3,0,2,0,1,0,2,0,1,0,0,0,0,0,1,1,0,0,2,0,0,0,1,0,1,0,0,0,0,0,1,1,0,0,1,1,1,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,2,0,1,1,0,0,0,0,0,3,0,0,0,0,2,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,4,1,0,3,0,2,0 103 0.217755 0 chr19 38589178 38589275 - MAP4K1, chr19 38589147 38589340 h38_mk_AluSx + 10 SRR1335446,SRR1390601,SRR1402900,SRR1414897,SRR1418127,SRR1433796,SRR1435020,SRR1474777,SRR1476571,SRR613627, 74 4,3,2,1,2,1,0,1,0,1,0,1,2,0,4,1,3,0,1,1,1,1,0,0,0,0,1,0,1,2,1,0,0,0,0,0,0,1,0,0,3,1,1,1,1,2,1,0,0,4,1,0,0,4,0,1,2,2,2,3,1,0,1,0,1,1,1,0,0,0,1,1,1,2,0,0,1,0,1,1,1,3,1,1,1,1,2,0,0,1,1,0,2,2,0,1,2,5,1,1,0,1,1,3,0,0,0,0,1,3,4,1,0,0,0,1,5 36 0,1,1,0,0,0,0,0,0,0,0,2,1,0,1,1,0,1,2,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,1,1,0,2,1,1,0,0,0,1,1,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,1,1,0,0,0,0,2,2,0,0,0,0,2,2,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0 115 0.228762 0 chr1 93873119 93873422 - DNTTIP2, chr1 93873300 93873659 h38_mk_AluJ + 1 SRR1487685, 117 84,46,103,123,85,74,95,251,143,188,84,66,97,98,130,77,320,75,87,66,77,75,399,92,119,90,144,98,77,91,132,201,155,140,73,109,144,94,34,170,143,125,61,83,160,123,120,96,93,83,96,63,68,84,79,105,161,117,69,122,107,96,204,160,141,59,60,48,76,113,166,187,153,103,70,82,122,124,64,110,82,134,91,99,149,163,88,56,159,63,130,44,100,119,99,147,80,232,85,140,14,81,43,133,253,254,124,154,118,229,144,76,102,128,167,134,139 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 39014387 39014547 - FBXO27, chr19 39014423 39014734 h38_mk_AluJb + 24 SRR1328895,SRR1337098,SRR1340508,SRR1348159,SRR1357478,SRR1360563,SRR1368772,SRR1386708,SRR1408208,SRR1416477,SRR1421177,SRR1440986,SRR1444678,SRR1453851,SRR1455925,SRR1464373,SRR1471943,SRR1474777,SRR1485459,SRR602314,SRR607337,SRR613627,SRR662534,SRR818210, 93 3,1,5,6,10,2,4,1,2,6,3,3,3,0,1,4,0,3,1,2,5,2,24,0,0,2,5,4,6,3,0,4,0,6,5,2,4,7,0,1,9,3,1,0,4,4,7,4,3,4,2,3,0,2,5,6,5,0,0,7,10,7,2,2,6,1,1,3,0,1,2,5,6,9,0,5,2,1,3,3,3,10,0,10,11,0,2,3,1,8,6,0,4,2,2,1,5,0,8,7,0,8,0,0,7,9,0,9,3,4,0,7,0,8,8,11,0 27 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,4,0,8,0,0,0,5,0,0,0,0,4,0,3,0,0,4,0,0,6,0,0,0,7,0,0,3,0,0,0,0,3,0,0,0,4,0,0,0,0,0,0,0,0,8,0,0,3,0,0,5,0,7,0,0,4,0,0,0,3,0,12,0,4,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,5,0,5,0,0,0,0,1,0,0,0,0,4,9,0,0,9,0 . . . chr19 4324455 4324664 - STAP2, chr19 4324540 4324856 h38_mk_AluSx1 + 19 SRR1317344,SRR1328895,SRR1331579,SRR1335446,SRR1336548,SRR1357478,SRR1413562,SRR1415234,SRR1418837,SRR1421177,SRR1435775,SRR1440986,SRR1464373,SRR1471943,SRR602314,SRR658307,SRR662233,SRR814967,SRR821602, 117 9,14,18,14,14,13,18,19,27,16,16,11,25,23,20,13,11,30,11,7,16,26,58,5,13,9,13,12,19,14,35,33,4,17,19,17,33,21,15,22,15,19,10,14,23,20,22,11,24,28,16,28,25,17,17,7,36,9,11,17,17,22,33,39,34,15,18,8,9,23,14,36,21,21,15,6,36,14,33,7,16,29,17,20,19,33,19,11,25,28,27,3,17,17,13,15,11,22,9,20,1,16,4,42,50,10,16,12,15,13,26,15,19,27,25,20,23 91 1,0,0,4,0,1,4,1,2,3,3,2,0,4,1,4,3,0,2,2,2,2,7,1,2,3,2,0,1,0,2,6,1,1,0,1,4,0,3,8,0,2,0,0,3,3,4,2,3,1,2,2,3,0,6,3,5,0,1,4,2,5,4,1,2,1,0,0,1,1,1,7,1,2,0,5,2,1,5,2,1,3,3,3,1,9,1,1,6,2,0,0,0,1,2,0,1,4,1,5,0,1,1,0,2,4,0,3,0,1,6,1,1,3,0,3,7 118 0.976346 1 chr19 4324455 4324667 - STAP2, chr19 4324540 4324856 h38_mk_AluSx1 + 83 SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1468955,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR604262,SRR604456,SRR607337,SRR613627,SRR657127,SRR657635,SRR657754,SRR657777,SRR661973,SRR818033,SRR818210, 117 9,14,18,14,14,13,18,19,27,16,16,11,25,23,20,13,11,30,11,7,16,26,58,5,13,9,13,12,19,14,35,33,4,17,19,17,33,21,15,22,15,19,10,14,23,20,22,11,24,28,16,28,25,17,17,7,36,9,11,17,17,22,33,39,34,15,18,8,9,23,14,36,21,21,15,6,36,14,33,7,16,29,17,20,19,33,19,11,25,28,27,3,17,17,13,15,11,22,9,20,1,16,4,42,50,10,16,12,15,13,26,15,19,27,25,20,23 109 0,0,3,4,0,6,8,7,4,4,2,4,3,5,3,1,2,3,0,0,3,3,9,1,1,1,2,1,3,2,3,2,3,4,1,1,11,2,3,10,3,5,3,6,5,3,7,2,2,4,1,4,3,3,3,2,6,2,1,6,5,2,11,3,2,3,1,2,4,4,3,12,1,4,5,2,4,6,11,1,2,6,3,3,2,10,2,4,6,2,4,0,4,2,1,4,1,7,1,13,0,1,0,3,5,5,6,5,1,4,1,6,1,1,5,4,1 118 0.977089 1 chr19 43833505 43833626 + ZNF283, chr19 43833471 43833790 h38_mk_AluY - 34 SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1348159,SRR1387809,SRR1402900,SRR1415234,SRR1432123,SRR1435020,SRR1440986,SRR1442571,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1487362,SRR602516,SRR602704,SRR604456,SRR607337,SRR818210, 71 1,0,2,2,4,1,2,1,1,1,1,1,1,2,1,2,4,1,1,0,1,2,1,1,0,1,1,0,1,0,3,1,0,0,2,1,0,0,0,2,0,2,0,0,0,3,0,0,1,0,4,2,3,1,0,1,1,1,0,2,0,0,0,2,2,2,0,1,1,1,1,0,4,2,4,1,1,0,0,1,0,1,0,0,0,1,1,0,0,0,0,0,1,0,0,2,5,1,2,1,0,0,1,0,0,2,0,0,0,1,3,0,0,2,2,5,7 63 0,0,1,4,1,1,1,0,0,1,1,0,1,1,3,0,2,2,2,0,1,2,3,2,0,0,2,0,0,0,0,1,0,0,0,0,3,4,0,1,0,5,2,0,0,2,1,0,0,0,3,0,0,0,0,0,1,1,0,4,0,0,0,0,2,2,1,1,0,0,3,0,7,3,5,7,2,1,1,1,2,2,1,0,0,1,0,1,1,0,0,0,0,1,2,1,3,0,2,1,0,1,2,0,1,0,0,0,1,0,0,1,0,2,1,2,0 114 0.329008 0 chr19 43881622 43881738 - ZNF404, chr19 43881665 43881989 h38_mk_AluSp + 2 SRR1414897,SRR1457482, 48 2,0,0,1,3,0,0,1,3,7,0,0,0,0,9,2,0,0,0,0,1,0,1,0,0,1,3,4,0,2,1,0,0,0,2,3,3,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,0,4,0,4,0,1,3,0,0,0,0,0,0,1,0,0,1,1,0,1,0,1,2,0,0,3,0,1,5,5,0,0,0,0,9,0,1,0,0,2,0,0,0,3,1,4,0,4,0,0,7,0,0,0,0,12,1,0,0,0,1,2,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 46748515 46748884 + FKRP, chr19 46748731 46749052 h38_mk_AluSx - 3 SRR1099499,SRR1447693,SRR661973, 116 10,9,9,38,15,19,19,8,24,12,20,15,7,18,23,13,11,13,2,2,28,15,66,9,15,11,21,1,23,7,12,7,8,17,14,15,14,11,9,26,18,10,10,20,9,15,18,7,9,21,14,10,8,9,10,5,16,4,9,16,13,7,3,31,18,8,6,7,9,10,25,6,37,8,3,14,26,11,11,19,11,12,11,20,17,11,17,3,15,2,22,2,13,10,24,19,37,2,16,19,0,10,9,5,22,31,5,4,25,40,26,21,6,42,21,30,8 96 3,1,0,6,2,5,0,1,1,1,4,1,0,0,2,2,1,2,1,0,6,0,10,3,4,3,6,3,9,2,2,1,1,6,2,1,2,4,0,2,3,7,2,3,4,2,5,1,4,0,0,4,0,0,2,1,3,1,4,1,2,2,2,4,8,1,1,0,4,3,1,0,4,1,4,5,7,2,0,2,1,3,2,5,4,6,3,2,2,1,1,1,4,3,5,4,6,0,0,1,0,2,0,0,3,4,0,0,3,12,4,5,2,3,5,9,3 117 0.940023 0 chr19 46748775 46748884 + FKRP, chr19 46748731 46749052 h38_mk_AluSx - 66 SRR1077405,SRR1084842,SRR1085495,SRR1316940,SRR1317344,SRR1326179,SRR1328895,SRR1335446,SRR1337098,SRR1340508,SRR1341763,SRR1348360,SRR1354446,SRR1356444,SRR1360563,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1416477,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 93 0,1,1,3,1,1,2,1,0,1,3,3,1,2,3,5,0,0,2,0,4,1,7,0,2,0,0,3,4,1,1,0,0,2,1,4,7,1,0,3,4,3,1,1,1,2,4,1,2,0,1,4,1,1,2,2,8,0,4,2,2,4,3,5,2,2,2,0,0,3,2,0,4,2,2,4,3,0,1,3,4,5,2,3,2,0,2,0,2,1,4,1,1,3,5,1,8,1,3,4,0,1,4,0,6,3,0,1,3,0,2,4,0,12,2,6,1 96 3,1,0,6,2,5,0,1,1,1,4,1,0,0,2,2,1,2,1,0,6,0,10,3,4,3,6,3,9,2,2,1,1,6,2,1,2,4,0,2,3,7,2,3,4,2,5,1,4,0,0,4,0,0,2,1,3,1,4,1,2,2,2,4,8,1,1,0,4,3,1,0,4,1,4,5,7,2,0,2,1,3,2,5,4,6,3,2,2,1,1,1,4,3,5,4,6,0,0,1,0,2,0,0,3,4,0,0,3,12,4,5,2,3,5,9,3 117 0.305575 0 chr19 46748787 46748884 + FKRP, chr19 46748731 46749052 h38_mk_AluSx - 1 SRR662534, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 96 3,1,0,6,2,5,0,1,1,1,4,1,0,0,2,2,1,2,1,0,6,0,10,3,4,3,6,3,9,2,2,1,1,6,2,1,2,4,0,2,3,7,2,3,4,2,5,1,4,0,0,4,0,0,2,1,3,1,4,1,2,2,2,4,8,1,1,0,4,3,1,0,4,1,4,5,7,2,0,2,1,3,2,5,4,6,3,2,2,1,1,1,4,3,5,4,6,0,0,1,0,2,0,0,3,4,0,0,3,12,4,5,2,3,5,9,3 117 0.204034 0 chr19 47495028 47495144 + NAPA-AS1, chr19 47494995 47495302 h38_mk_AluJo - 4 SRR1316940,SRR1328895,SRR1360128,SRR1498550, 110 11,4,14,7,1,1,3,2,8,9,7,0,9,6,8,6,5,3,2,1,2,17,13,4,3,1,7,5,1,5,6,6,4,5,4,4,14,3,7,4,2,16,4,3,1,10,5,5,7,10,18,0,10,7,7,3,9,9,4,6,7,4,2,7,13,6,12,8,7,3,6,5,0,9,7,7,8,8,3,5,5,7,19,3,3,2,10,0,18,6,5,2,5,4,8,0,2,9,8,9,2,9,1,0,5,3,2,6,1,0,3,3,9,4,4,1,3 53 2,0,0,1,0,1,1,0,0,4,0,1,1,2,2,4,1,1,0,0,0,0,0,0,1,0,1,0,0,1,0,1,4,0,0,0,0,0,0,0,0,2,2,0,0,4,2,0,0,1,2,0,1,2,1,0,2,1,1,0,0,0,0,3,0,0,1,0,1,2,0,1,0,1,3,0,0,0,0,0,0,1,1,0,0,0,1,1,4,1,0,2,0,0,2,0,1,3,1,1,0,0,0,0,0,0,0,0,0,0,0,1,2,0,1,1,1 . . . chr19 4770114 4770221 + MIR7-3HG, chr19 4769896 4770210 h38_mk_AluS - 1 SRR1387264, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 103 5,0,7,16,4,7,10,37,19,4,24,7,6,9,8,15,8,17,3,0,10,8,26,14,14,2,12,8,17,2,8,26,0,11,0,8,9,5,2,22,6,9,6,10,25,13,21,6,7,19,0,12,3,5,7,2,14,3,21,13,6,11,9,8,20,3,0,0,2,11,13,3,38,0,3,4,7,16,9,18,3,27,0,6,12,20,6,2,0,0,18,0,8,12,6,12,8,6,7,9,1,3,3,1,15,6,0,0,18,13,24,14,7,23,14,30,1 . . . chr19 48810984 48811329 - BCAT2, chr19 48811202 48811524 h38_mk_AluSx1 + 1 SRR1317344, 116 13,3,28,19,12,31,13,17,17,47,20,5,20,11,15,5,15,11,10,9,6,10,30,5,18,12,20,9,13,26,29,22,8,15,9,9,12,9,23,28,15,26,8,11,17,25,18,22,21,14,14,12,5,12,9,13,13,14,11,18,6,5,13,18,24,20,32,12,13,19,9,11,9,27,27,17,28,13,12,6,9,13,40,26,29,19,30,13,25,8,21,0,16,18,15,9,14,14,28,27,5,15,19,10,38,43,9,20,13,39,12,19,13,17,17,10,11 1 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 48960239 48960336 + BAX, chr19 48960174 48960370 h38_mk_AluSx1 - 17 SRR1072367,SRR1316940,SRR1318163,SRR1326179,SRR1333741,SRR1337412,SRR1354446,SRR1356444,SRR1368772,SRR1387809,SRR1434526,SRR1444622,SRR1447693,SRR1487362,SRR600361,SRR657754,SRR821602, 113 9,3,7,7,3,7,3,8,7,13,8,5,3,1,9,2,14,3,7,1,4,7,22,7,7,3,9,4,5,5,3,8,4,6,1,5,8,6,1,4,5,10,2,8,8,7,8,5,5,5,2,5,3,5,3,3,6,7,6,4,1,4,5,10,4,3,6,0,9,5,8,9,7,5,3,3,3,6,2,5,7,5,1,8,12,14,5,2,7,6,11,1,8,3,2,3,2,2,7,7,0,6,4,0,3,4,3,5,9,6,6,7,0,5,17,4,11 95 3,0,4,2,1,0,2,3,1,4,0,1,1,1,4,0,3,9,0,0,1,4,1,1,3,1,3,1,2,5,0,6,2,2,1,3,4,4,0,6,3,3,1,2,7,4,0,0,4,2,3,1,1,0,3,2,2,1,4,1,1,1,0,4,1,1,2,0,7,0,1,3,1,0,1,1,1,3,2,0,2,4,1,0,2,5,2,0,2,2,5,0,2,0,2,5,1,4,2,7,0,1,6,14,6,4,1,14,1,1,3,2,0,3,1,1,2 118 0.065664 1 chr19 49382851 49382948 - AC010643.1, chr19 49382848 49382974 h38_mk_AluJb + 1 SRR1084842, 8 0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 44 0,0,0,8,2,1,0,0,2,0,0,0,0,1,1,2,1,1,0,1,0,0,1,0,0,1,0,0,2,0,2,0,0,0,0,0,0,0,0,1,0,0,1,1,2,1,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,2,0,1,1,0,0,0,0,1,0,0,2,1,0,0,1,1,1,0,1,3,0,0,0,0,0,0,0,1,1,0,0,1,1,0,2,0,0,0,0,0,0,0,0,2,0,0,0,1,9,0,0,1,1,5,0 . . . chr19 49521695 49521813 + FCGRT, chr19 49521658 49521979 h38_mk_AluJb - 19 SRR1072367,SRR1085495,SRR1314163,SRR1337412,SRR1340508,SRR1399779,SRR1408208,SRR1416754,SRR1421177,SRR1432123,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1474777,SRR1485459,SRR1500868,SRR602516,SRR604262, 45 2,1,1,1,2,0,0,2,0,2,0,0,0,0,0,0,3,0,0,1,0,3,2,0,0,3,0,0,0,1,0,1,0,2,0,2,1,1,0,0,0,1,0,0,1,0,1,0,0,0,1,0,1,0,0,1,2,1,0,0,0,1,0,3,2,1,0,0,2,0,0,0,1,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,2,1,0,0,0,1,2,0,6,0,1,0,3,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0 74 2,0,7,0,3,0,2,2,0,2,0,2,0,1,1,2,4,0,1,2,0,7,4,0,2,2,3,0,0,3,3,1,2,0,2,0,0,0,3,2,1,2,0,0,2,0,4,2,2,0,1,0,5,0,1,3,3,0,1,0,2,1,3,3,3,2,0,0,2,1,0,1,0,0,3,2,1,5,0,0,2,1,1,1,0,7,1,0,3,7,3,1,2,1,3,1,0,7,6,2,0,0,0,1,1,0,1,1,1,0,2,0,0,0,0,0,4 118 0.033113 1 chr19 49576759 49576877 - NOSIP, chr19 49576594 49576919 h38_mk_AluSp + 99 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602704,SRR604262,SRR604456,SRR607337,SRR614802,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 116 9,8,7,17,3,5,5,7,16,17,7,6,4,3,7,8,7,15,6,1,10,4,32,6,11,11,7,0,5,3,3,10,3,7,12,10,9,11,6,9,11,6,4,10,5,6,8,6,5,8,5,4,4,5,1,5,6,2,11,17,16,7,7,5,7,2,8,13,11,3,9,9,16,8,1,13,10,7,5,11,5,7,7,7,13,1,2,3,11,8,18,2,9,6,6,10,12,3,9,8,1,6,3,7,8,13,1,8,9,2,19,12,3,7,8,8,1 112 2,6,4,9,0,3,2,3,12,11,5,4,4,5,5,4,5,8,5,1,4,2,27,6,9,4,5,3,6,2,1,5,0,4,3,7,8,5,2,6,8,1,3,7,4,10,8,3,4,5,6,2,3,3,4,3,1,2,4,4,12,4,2,5,4,5,6,6,8,1,5,2,6,9,1,8,5,6,7,3,5,7,6,4,7,3,3,4,7,6,4,1,2,6,5,2,8,4,7,5,0,4,1,0,0,17,1,1,3,5,13,8,3,8,6,5,3 118 0.197666 1 chr19 49696482 49696602 + CPT1C, chr19 49696445 49696632 h38_mk_AluJo - 37 SRR1072367,SRR1084842,SRR1085495,SRR1102055,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1341763,SRR1342045,SRR1348360,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1414897,SRR1418837,SRR1435020,SRR1435293,SRR1440986,SRR1444678,SRR1447693,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR601500,SRR602314,SRR602704,SRR604262,SRR607337,SRR657635,SRR662534,SRR818033,SRR818210, 93 2,0,3,7,4,0,3,4,2,0,4,4,2,3,3,1,4,4,0,0,4,1,9,0,4,6,3,3,7,3,2,4,1,1,0,2,1,7,1,1,5,3,4,7,2,0,2,1,2,5,0,2,1,2,6,3,9,0,2,5,3,1,0,1,5,2,1,2,5,1,2,2,5,1,4,1,3,2,0,4,2,4,0,2,2,1,0,0,2,0,0,1,1,4,4,1,6,3,1,6,1,1,0,0,10,0,1,0,2,0,0,2,1,5,4,11,0 102 2,0,1,6,7,5,2,1,7,1,4,4,2,1,6,3,3,4,1,0,4,3,4,2,4,10,3,4,1,1,5,4,2,4,3,5,3,5,2,10,3,4,5,4,4,0,4,2,2,5,2,3,3,0,2,1,4,0,5,7,2,3,3,9,8,1,1,5,3,1,1,4,8,1,1,5,5,5,0,3,6,10,1,4,5,3,1,0,0,1,3,0,0,5,3,3,11,5,1,9,0,2,1,0,8,2,2,0,6,3,7,9,0,5,10,8,0 118 0.103651 1 chr1 95041493 95041612 - ALG14, chr1 95041401 95041656 h38_mk_AluJo + 1 SRR604262, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 63 2,0,1,0,3,0,2,4,0,2,1,0,5,0,1,0,3,0,0,0,2,3,5,0,1,0,1,1,2,1,1,2,3,1,0,0,0,0,1,1,2,3,0,0,0,1,3,3,0,0,0,0,3,0,0,0,0,1,6,0,0,0,0,2,3,1,0,2,0,0,2,2,2,2,0,0,0,0,1,1,5,0,0,0,0,1,5,0,3,0,4,0,1,2,2,2,3,2,4,1,0,0,0,0,5,1,2,0,3,2,2,1,0,3,0,0,0 118 0.063142 1 chr19 50802454 50802614 - C19orf48, chr19 50802492 50802795 h38_mk_AluS + 4 SRR1386708,SRR1468514,SRR602704,SRR657635, 70 2,1,0,1,0,3,2,2,4,2,3,1,3,1,2,3,11,0,2,0,1,4,7,3,0,0,0,0,0,0,2,0,3,1,0,0,1,0,1,1,1,2,1,0,0,1,1,0,4,4,1,5,0,0,0,0,3,1,0,1,0,1,1,0,1,1,0,0,0,2,1,0,4,1,0,0,6,1,0,2,0,4,0,3,1,1,1,0,0,0,2,1,0,1,2,0,2,1,0,0,1,0,0,11,2,0,6,0,6,1,0,4,0,1,0,2,4 27 0,0,0,0,0,1,0,1,0,0,0,0,0,0,2,0,0,1,1,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,4,0,1,0,1,0,0,1,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0 118 0.134814 1 chr19 51927895 51927994 + ZNF613, chr19 51927841 51928019 h38_mk_AluJ - 5 SRR1340508,SRR1455925,SRR602704,SRR814967,SRR818210, 24 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,1,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,1,1,0,6,0,0,0,0,0,0,0,0,0,0,0,1,1,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,4,0 46 0,0,0,1,1,0,2,0,1,2,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,1,0,0,0,2,0,1,1,1,1,1,1,0,1,0,0,0,1,0,0,0,0,1,0,1,0,1,2,0,0,0,0,1,0,0,0,0,0,0,0,2,0,1,1,0,0,0,4,1,0,0,0,0,0,0,0,2,2,0,2,0,1,0,0,2,0,1,1,0,0,2,0,2,1,0,1,1,1,0,0,0,4,1,3,2 106 0.275405 0 chr19 52093846 52093911 - ZNF841, chr19 52093843 52094042 h38_mk_AluJb + 1 SRR663633, 114 7,0,9,15,4,5,4,6,3,8,6,5,1,6,10,15,16,3,2,4,11,3,8,12,11,10,12,2,9,4,9,3,3,3,2,2,1,7,4,5,2,3,4,8,7,3,6,3,4,8,7,4,4,8,2,10,9,3,11,8,3,4,1,6,4,2,6,7,8,8,5,2,10,6,5,14,19,6,0,13,7,5,9,9,12,15,7,1,9,4,4,4,3,13,6,8,6,9,3,17,1,17,6,1,3,18,0,9,13,38,9,14,9,25,18,8,2 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0 . . . chr19 52093846 52093935 - ZNF841, chr19 52093843 52094042 h38_mk_AluJb + 1 SRR1434526, 114 7,0,9,15,4,5,4,6,3,8,6,5,1,6,10,15,16,3,2,4,11,3,8,12,11,10,12,2,9,4,9,3,3,3,2,2,1,7,4,5,2,3,4,8,7,3,6,3,4,8,7,4,4,8,2,10,9,3,11,8,3,4,1,6,4,2,6,7,8,8,5,2,10,6,5,14,19,6,0,13,7,5,9,9,12,15,7,1,9,4,4,4,3,13,6,8,6,9,3,17,1,17,6,1,3,18,0,9,13,38,9,14,9,25,18,8,2 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 52093846 52093971 - ZNF432,ZNF841, chr19 52093843 52094042 h38_mk_AluJb + 44 SRR1072367,SRR1084842,SRR1085495,SRR1316940,SRR1318163,SRR1326179,SRR1331579,SRR1336548,SRR1337098,SRR1340508,SRR1342045,SRR1356619,SRR1360563,SRR1367943,SRR1375571,SRR1386708,SRR1408368,SRR1415234,SRR1416477,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR600361,SRR601500,SRR602516,SRR604262,SRR607337,SRR614802,SRR661973,SRR662534,SRR1399779, 114 7,0,9,15,4,5,4,6,3,8,6,5,1,6,10,15,16,3,2,4,11,3,8,12,11,10,12,2,9,4,9,3,3,3,2,2,1,7,4,5,2,3,4,8,7,3,6,3,4,8,7,4,4,8,2,10,9,3,11,8,3,4,1,6,4,2,6,7,8,8,5,2,10,6,5,14,19,6,0,13,7,5,9,9,12,15,7,1,9,4,4,4,3,13,6,8,6,9,3,17,1,17,6,1,3,18,0,9,13,38,9,14,9,25,18,8,2 57 2,0,1,2,3,0,0,0,0,1,2,2,1,0,1,0,2,0,0,1,2,0,4,0,0,2,0,0,0,0,1,0,0,1,0,1,1,3,2,1,0,0,0,0,2,0,1,1,0,1,2,2,0,0,0,2,2,0,3,2,5,0,0,1,2,0,2,0,0,0,1,0,1,0,0,6,5,2,0,0,0,0,0,0,3,2,1,0,2,0,0,0,2,1,0,2,1,1,0,3,1,1,2,0,0,2,0,0,0,6,2,4,0,0,0,0,0 . . . chr19 52169648 52169781 - AC011468.2,ZNF616,ZNF836, chr19 52169645 52169821 h38_mk_AluJb + 115 SRR1084649,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1335446,SRR1336548,SRR1337412,SRR1340508,SRR1341365,SRR1348360,SRR1354446,SRR1356444,SRR1357478,SRR1360128,SRR1360563,SRR1368772,SRR1381673,SRR1389979,SRR1399779,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435293,SRR1437538,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1457503,SRR1468955,SRR1474553,SRR1474777,SRR1476571,SRR1487362,SRR1487685,SRR1488651,SRR1500868,SRR595926,SRR600361,SRR604262,SRR607337,SRR613627,SRR657127,SRR657635,SRR657777,SRR662233,SRR662534,SRR663633,SRR818033,SRR818210,SRR1328895,SRR1337098,SRR1487194,SRR1072367,SRR1084842,SRR1315970,SRR1316940,SRR1318163,SRR1331579,SRR1341763,SRR1342045,SRR1348159,SRR1356619,SRR1361567,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1402900,SRR1408368,SRR1416477,SRR1434526,SRR1435020,SRR1435775,SRR1439873,SRR1444678,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1485459,SRR1498550,SRR599510,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR614802,SRR657754,SRR658307,SRR661349,SRR661973,SRR814967,SRR821602, 117 11,2,6,16,9,7,22,17,12,12,18,9,9,13,13,9,13,10,12,11,10,9,52,19,16,13,18,22,18,15,9,16,6,17,3,14,31,6,4,21,21,24,14,11,7,11,12,9,10,15,16,13,13,4,13,23,26,12,14,19,11,10,22,12,22,11,8,7,13,14,26,42,22,14,13,10,18,7,8,14,8,13,7,14,23,33,11,6,5,9,7,2,13,17,10,19,17,14,5,7,2,8,6,34,21,19,5,26,17,13,18,16,12,14,16,18,13 115 14,0,11,14,7,13,22,9,10,13,18,8,6,9,15,7,9,16,8,8,11,7,43,14,13,6,14,12,15,11,21,16,7,18,4,17,12,10,5,19,16,18,10,18,8,6,7,13,5,10,7,8,16,3,12,15,26,11,8,9,5,9,7,13,18,3,8,2,10,10,14,32,22,7,7,10,14,15,7,11,15,10,4,21,9,29,14,1,11,9,22,2,10,11,13,23,21,9,7,17,0,15,4,26,12,15,8,5,15,13,14,21,2,17,28,13,4 118 0.999793 1 chr19 52347707 52347831 + ZNF610, chr19 52347516 52347832 h38_mk_AluJo - 79 SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR814967,SRR821602, 111 5,2,1,5,6,10,7,4,2,8,7,2,5,7,10,3,7,4,2,1,9,2,15,9,8,5,6,1,9,8,7,2,3,3,4,3,5,0,5,6,16,6,6,6,2,5,2,5,2,4,0,4,1,3,3,4,7,2,3,4,7,3,2,4,3,1,1,5,5,5,9,2,5,8,4,10,14,2,6,10,3,4,6,9,4,6,4,3,8,5,9,4,2,10,9,11,13,9,6,11,0,4,6,0,3,13,1,0,5,15,15,7,0,8,7,3,6 97 3,2,1,5,1,2,2,0,3,0,4,1,2,4,2,1,3,3,1,0,3,1,4,1,2,3,2,0,1,1,4,1,1,2,1,1,0,3,2,4,3,5,3,1,1,1,3,0,3,2,6,2,1,0,0,4,2,1,3,4,2,1,1,4,1,2,2,1,4,1,3,0,5,1,1,7,5,3,2,1,1,1,0,2,3,7,2,0,4,2,2,0,2,0,0,1,5,1,3,5,1,0,3,0,7,14,4,0,1,10,5,0,0,7,1,0,10 . . . chr19 52347707 52347944 + ZNF610, chr19 52347516 52347832 h38_mk_AluJo - 83 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1361567,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 111 5,2,1,5,6,10,7,4,2,8,7,2,5,7,10,3,7,4,2,1,9,2,15,9,8,5,6,1,9,8,7,2,3,3,4,3,5,0,5,6,16,6,6,6,2,5,2,5,2,4,0,4,1,3,3,4,7,2,3,4,7,3,2,4,3,1,1,5,5,5,9,2,5,8,4,10,14,2,6,10,3,4,6,9,4,6,4,3,8,5,9,4,2,10,9,11,13,9,6,11,0,4,6,0,3,13,1,0,5,15,15,7,0,8,7,3,6 110 1,1,1,8,6,10,10,3,5,6,5,3,1,1,13,5,8,3,2,1,2,0,17,4,3,6,10,1,4,3,4,3,2,1,1,2,4,4,2,7,15,1,2,5,1,5,5,5,3,4,4,5,2,0,2,5,6,3,2,4,7,6,0,6,1,3,2,2,6,5,7,4,7,8,2,9,13,1,1,2,6,10,3,6,8,5,2,2,7,3,5,0,2,6,7,10,5,9,2,15,0,4,2,0,18,4,1,5,2,9,12,8,0,6,13,7,7 . . . chr19 52374484 52374713 + ZNF880, chr19 52374454 52374645 h38_mk_AluJo - 1 SRR604456, 45 0,0,3,1,0,0,0,0,0,0,4,0,0,0,0,2,0,0,0,0,3,0,0,3,0,0,0,1,0,0,2,3,0,2,0,3,0,0,0,0,0,3,3,4,1,3,0,2,3,3,1,1,3,0,0,0,2,0,0,2,3,3,0,0,0,0,0,1,2,0,0,2,3,0,1,0,2,2,1,0,0,0,0,2,2,0,0,0,0,0,5,0,2,1,0,0,2,0,2,1,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,3 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 52396610 52396752 - ZNF528-AS1, chr19 52396638 52396948 h38_mk_AluJ + 2 SRR1402900,SRR607337, 82 2,0,1,3,1,5,2,2,0,1,1,0,0,1,7,1,1,1,1,0,2,3,0,0,2,0,1,0,1,0,6,0,0,0,0,4,2,1,0,2,2,2,1,1,1,3,4,5,2,0,4,0,3,3,2,1,0,2,1,0,0,0,0,1,3,3,1,1,1,4,3,0,2,1,1,1,1,2,0,3,2,2,0,1,0,4,2,1,1,1,1,0,0,2,3,1,0,0,2,2,0,0,1,0,1,6,3,4,1,4,1,3,6,0,2,1,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 52402429 52402545 + ZNF528, chr19 52402385 52402711 h38_mk_AluSz6 - 11 SRR1326179,SRR1333741,SRR1356619,SRR1487194,SRR1487685,SRR1498550,SRR600361,SRR602704,SRR657635,SRR661349,SRR818210, 33 0,0,4,2,0,0,0,0,0,2,1,0,0,1,2,0,0,2,0,0,0,0,6,0,0,3,0,0,0,1,2,0,0,0,0,0,1,0,0,0,1,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,1,0,2,0,0,0,0,0,0,2,0,0,0,4,0,0,0,1,0,1,0,1,2,0,0,1,0,0,0,2,0,1,0,0,0,0,0,2,2,0,0,4,0,0,0,0,0,0,2,0 31 0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,3,0,0,0,0,0,2,0,0,4,1,0,0,0,0,2,0,0,0,0,0,0,1,2,0,0,0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,1,1,2,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,1,2,0,0,1,1,0,2,0,0,0,0,4,0,0,3,2,0,0,3,0,2,0,2,0 117 0.099981 0 chr19 52616718 52616815 - ZNF83, chr19 52616552 52616873 h38_mk_AluSp + 27 SRR1072367,SRR1084649,SRR1316940,SRR1318163,SRR1340508,SRR1341365,SRR1348360,SRR1356444,SRR1360128,SRR1360563,SRR1386708,SRR1390601,SRR1402900,SRR1421177,SRR1432123,SRR1444678,SRR1468955,SRR1487685,SRR1500868,SRR602516,SRR604456,SRR607337,SRR613627,SRR657754,SRR661973,SRR662534,SRR818033, 117 54,18,29,31,28,55,27,32,25,29,16,10,22,26,45,20,46,51,36,21,42,43,23,39,30,48,52,40,24,47,53,19,11,19,19,9,11,20,19,24,23,41,14,13,22,39,33,22,41,34,44,17,23,30,27,23,50,75,45,36,13,19,15,12,38,23,24,14,30,41,30,6,24,25,24,32,82,15,6,26,18,33,22,31,33,37,52,12,38,16,28,10,34,32,44,23,37,35,18,71,3,72,29,48,34,88,24,24,31,114,78,36,25,55,94,25,33 51 2,0,1,1,1,0,1,0,0,1,1,2,0,0,2,0,0,0,0,0,0,0,3,2,1,0,0,2,1,1,1,0,1,1,0,0,1,0,0,1,0,0,0,3,1,1,0,0,1,0,0,0,0,0,0,2,2,1,0,0,0,0,0,0,1,1,1,2,0,0,1,0,0,1,0,0,0,1,0,1,0,0,0,0,0,1,2,0,0,1,0,0,1,0,0,1,0,1,2,2,0,2,1,0,0,6,0,0,0,2,2,2,0,1,1,0,0 118 0.880183 1 chr19 52616718 52616835 - ZNF83, chr19 52616552 52616873 h38_mk_AluSp + 4 SRR1314163,SRR1318163,SRR1326179,SRR1336548, 117 54,18,29,31,28,55,27,32,25,29,16,10,22,26,45,20,46,51,36,21,42,43,23,39,30,48,52,40,24,47,53,19,11,19,19,9,11,20,19,24,23,41,14,13,22,39,33,22,41,34,44,17,23,30,27,23,50,75,45,36,13,19,15,12,38,23,24,14,30,41,30,6,24,25,24,32,82,15,6,26,18,33,22,31,33,37,52,12,38,16,28,10,34,32,44,23,37,35,18,71,3,72,29,48,34,88,24,24,31,114,78,36,25,55,94,25,33 88 2,2,3,3,2,0,1,4,3,0,3,2,1,3,7,4,6,2,1,3,1,4,0,2,3,2,3,3,2,3,0,1,1,2,3,0,1,0,0,2,1,4,0,0,1,1,1,3,0,2,1,1,1,2,1,2,1,1,2,1,0,4,0,1,4,2,0,0,0,2,5,2,1,5,2,2,0,1,0,1,0,4,1,1,2,1,2,0,2,0,1,1,0,0,0,0,1,1,0,5,0,4,1,0,4,10,2,2,2,8,3,3,0,3,6,0,3 118 0.883353 1 chr19 52616718 52616841 - ZNF83, chr19 52616552 52616873 h38_mk_AluSp + 66 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1316940,SRR1317344,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356444,SRR1357478,SRR1360563,SRR1367943,SRR1387264,SRR1387809,SRR1389979,SRR1399779,SRR1408208,SRR1415234,SRR1416477,SRR1418837,SRR1421177,SRR1433796,SRR1434526,SRR1439873,SRR1440986,SRR1447693,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1474777,SRR1476571,SRR1485459,SRR1487362,SRR1500868,SRR595926,SRR599510,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033, 117 54,18,29,31,28,55,27,32,25,29,16,10,22,26,45,20,46,51,36,21,42,43,23,39,30,48,52,40,24,47,53,19,11,19,19,9,11,20,19,24,23,41,14,13,22,39,33,22,41,34,44,17,23,30,27,23,50,75,45,36,13,19,15,12,38,23,24,14,30,41,30,6,24,25,24,32,82,15,6,26,18,33,22,31,33,37,52,12,38,16,28,10,34,32,44,23,37,35,18,71,3,72,29,48,34,88,24,24,31,114,78,36,25,55,94,25,33 99 5,1,3,3,2,3,1,1,1,1,8,0,2,3,6,2,3,4,2,1,3,3,4,3,3,4,3,4,3,1,2,4,0,4,0,3,1,0,0,0,5,3,1,1,4,4,7,0,2,1,5,1,1,3,2,3,1,2,7,0,1,0,1,1,3,0,1,0,5,1,1,2,4,3,1,5,7,2,0,3,1,2,1,4,0,3,2,0,0,3,1,2,1,5,5,2,2,5,1,4,0,7,1,0,5,7,6,1,3,6,4,4,0,6,7,1,3 118 0.882116 1 chr19 52805145 52805262 - ZNF28, chr19 52804977 52805307 h38_mk_AluSc8 + 22 SRR1084842,SRR1316940,SRR1320115,SRR1326179,SRR1331579,SRR1340508,SRR1367943,SRR1387264,SRR1390601,SRR1434526,SRR1435293,SRR1444678,SRR1468514,SRR1485459,SRR1487194,SRR600361,SRR602314,SRR602704,SRR604456,SRR613627,SRR614802,SRR818210, 80 0,0,5,4,1,0,1,0,0,4,2,1,2,1,5,1,3,0,0,2,1,0,8,1,0,1,2,2,2,0,1,0,0,0,2,1,0,3,1,1,5,1,3,1,0,0,2,0,4,4,2,0,2,2,0,1,0,0,5,0,8,1,0,2,1,0,3,2,2,2,2,0,2,1,2,2,1,1,0,1,1,1,2,3,3,2,2,0,2,3,0,1,1,0,2,1,1,0,2,3,0,4,3,0,1,0,1,4,0,7,0,3,0,2,3,2,0 69 2,0,1,1,1,1,0,0,1,1,0,2,1,3,3,1,1,1,1,0,1,0,5,0,1,2,0,0,0,4,2,0,0,0,0,3,0,2,0,1,2,1,1,1,0,0,1,0,1,1,2,0,0,0,0,1,1,0,4,0,1,0,0,1,0,0,0,4,0,1,1,0,0,5,0,3,1,0,1,0,1,1,3,3,3,1,3,0,3,1,0,1,3,2,2,2,1,0,2,1,0,2,1,0,0,0,0,2,2,2,0,0,0,1,0,2,1 96 0.928662 0 chr19 52845179 52845296 - ZNF468, chr19 52845011 52845339 h38_mk_AluSc8 + 28 SRR1084842,SRR1085495,SRR1317344,SRR1326179,SRR1340508,SRR1342045,SRR1356619,SRR1375571,SRR1387264,SRR1389979,SRR1402900,SRR1408208,SRR1439873,SRR1440986,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1485459,SRR602314,SRR602516,SRR602704,SRR604262,SRR613627,SRR657635,SRR661973,SRR814967,SRR818033, 72 1,0,2,2,7,1,0,0,0,0,5,0,0,0,3,1,6,4,1,1,2,1,7,1,0,2,1,0,1,2,2,0,3,0,0,0,0,1,0,0,1,2,3,0,2,2,1,0,1,0,0,0,0,1,1,2,1,1,0,2,2,0,0,4,1,3,1,0,0,0,0,0,5,5,0,2,3,0,0,2,0,0,0,3,2,2,1,0,2,0,2,0,0,1,1,6,5,2,1,2,1,6,3,0,3,0,1,1,3,5,9,2,0,4,5,4,0 77 1,0,0,5,3,1,3,0,1,1,2,1,0,1,6,1,1,0,3,0,1,0,4,0,2,2,1,0,3,1,3,2,0,1,2,1,2,2,0,2,6,0,1,0,1,2,4,0,0,3,0,2,2,1,0,0,0,1,1,0,0,2,0,4,1,0,1,2,1,1,2,0,1,1,0,6,4,0,0,2,1,3,0,5,1,1,1,0,1,0,0,0,1,0,3,1,6,3,1,2,2,5,1,8,3,0,0,0,1,2,0,2,0,1,3,0,0 101 0.797975 0 chr19 52866746 52866851 - ZNF320, chr19 52866591 52866903 h38_mk_AluSz6 + 1 SRR818033, 22 1,1,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,1,0,0 19 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,2,2,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 54 0.406636 0 chr19 52891229 52891326 - ZNF320, chr19 52891163 52891381 h38_mk_AluSz + 1 SRR1387264, 115 11,4,4,19,5,7,11,6,5,2,9,3,5,10,9,6,19,8,8,1,8,3,22,9,10,14,19,3,6,5,8,9,2,6,2,7,6,7,4,8,6,15,6,12,9,6,9,6,11,9,4,6,3,7,8,11,19,5,10,6,4,4,1,9,16,2,8,4,8,11,3,1,12,9,0,15,24,4,3,16,7,6,5,10,9,19,9,2,15,6,13,1,8,9,18,13,10,6,16,7,2,14,3,0,5,24,7,11,18,20,19,25,1,27,10,12,6 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 52891229 52891346 - AC010487.3,ZNF320, chr19 52891163 52891381 h38_mk_AluSz + 39 SRR1072367,SRR1084842,SRR1099499,SRR1317344,SRR1318163,SRR1320963,SRR1333741,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1357478,SRR1386708,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1413562,SRR1418837,SRR1444622,SRR1455925,SRR1468514,SRR1485459,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR602516,SRR602704,SRR607337,SRR657754,SRR661349,SRR661973,SRR662534,SRR818210,SRR1367943,SRR601500, 115 11,4,4,19,5,7,11,6,5,2,9,3,5,10,9,6,19,8,8,1,8,3,22,9,10,14,19,3,6,5,8,9,2,6,2,7,6,7,4,8,6,15,6,12,9,6,9,6,11,9,4,6,3,7,8,11,19,5,10,6,4,4,1,9,16,2,8,4,8,11,3,1,12,9,0,15,24,4,3,16,7,6,5,10,9,19,9,2,15,6,13,1,8,9,18,13,10,6,16,7,2,14,3,0,5,24,7,11,18,20,19,25,1,27,10,12,6 63 1,0,0,2,1,3,1,0,1,0,1,1,0,1,0,1,1,1,0,0,0,0,5,0,1,6,3,1,0,0,0,3,1,0,1,4,1,1,1,2,0,0,2,1,1,3,1,3,1,0,1,0,0,1,2,0,0,1,1,2,0,0,0,0,1,0,2,0,0,1,0,0,1,0,0,1,4,0,0,0,0,0,0,1,0,4,2,0,3,1,1,0,1,1,0,1,1,0,0,3,0,0,0,0,2,10,1,0,3,2,0,2,0,0,0,3,1 116 0.999216 0 chr19 52893779 52893927 - ZNF320, chr19 52893759 52893891 h38_mk_AluSx + 1 SRR1099499, 6 1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 4 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 56 0.086310 0 chr19 53093574 53093637 - ZNF160, chr19 53093599 53093810 h38_mk_AluJ + 1 SRR1072367, 1 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 1 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.001425 0 chr19 53115210 53115307 - ZNF415, chr19 53115044 53115358 h38_mk_AluSq2 + 106 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 9,12,5,21,6,17,8,5,14,16,18,7,8,9,21,11,6,14,13,2,12,11,31,12,23,5,16,2,15,7,17,10,3,14,7,14,20,13,10,11,20,16,8,12,6,15,14,7,11,9,21,4,15,3,4,7,21,5,14,11,20,2,3,20,14,10,6,10,16,9,15,2,7,14,6,9,12,9,9,11,7,9,6,16,17,4,12,3,10,6,7,2,9,13,11,14,16,5,3,12,2,15,5,0,16,20,1,0,9,44,15,12,3,25,10,9,8 111 9,9,2,9,5,11,4,8,3,8,10,7,5,2,11,5,1,5,2,1,5,4,20,4,9,4,14,4,14,0,7,3,4,3,4,3,11,8,3,9,6,7,5,4,5,6,4,4,4,5,5,5,2,2,3,4,9,1,7,1,10,1,2,8,5,0,3,5,7,3,4,2,4,4,0,6,2,2,2,6,2,1,3,6,9,4,10,1,1,5,10,2,7,7,6,4,6,2,4,9,0,3,2,0,4,4,2,3,4,2,12,11,0,12,11,4,7 118 0.668974 1 chr19 53115210 53115332 - ZNF415, chr19 53115044 53115358 h38_mk_AluSq2 + 86 SRR1072367,SRR1084649,SRR1084842,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1354446,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662534,SRR814967,SRR818210, 115 9,12,5,21,6,17,8,5,14,16,18,7,8,9,21,11,6,14,13,2,12,11,31,12,23,5,16,2,15,7,17,10,3,14,7,14,20,13,10,11,20,16,8,12,6,15,14,7,11,9,21,4,15,3,4,7,21,5,14,11,20,2,3,20,14,10,6,10,16,9,15,2,7,14,6,9,12,9,9,11,7,9,6,16,17,4,12,3,10,6,7,2,9,13,11,14,16,5,3,12,2,15,5,0,16,20,1,0,9,44,15,12,3,25,10,9,8 97 7,1,2,7,1,1,3,0,5,5,3,1,2,3,1,3,0,0,2,0,1,5,9,3,7,1,9,1,11,2,0,2,2,1,2,3,3,4,1,2,4,1,2,3,4,2,1,2,2,4,5,4,1,3,1,2,6,4,4,1,6,4,0,5,0,2,0,2,3,3,7,0,5,5,1,4,6,4,1,5,4,2,4,5,7,3,0,0,1,4,2,0,8,6,1,4,7,3,2,5,0,3,0,0,7,2,6,0,7,5,0,3,0,11,0,5,0 117 0.666632 0 chr19 53445001 53445219 + ZNF761, chr19 53444958 53445154 h38_mk_AluSp - 58 SRR1072367,SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1318163,SRR1320963,SRR1326179,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1360563,SRR1368772,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1414897,SRR1416477,SRR1432123,SRR1433796,SRR1435020,SRR1435775,SRR1439873,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR661349,SRR814967,SRR818033, 110 3,5,0,10,3,3,9,1,4,6,5,2,3,3,16,5,0,8,1,4,4,3,19,4,12,3,9,7,7,1,0,3,1,6,5,4,3,2,2,3,7,6,9,6,1,4,7,6,1,3,5,4,1,2,2,4,6,1,3,10,3,5,1,2,4,1,3,2,2,7,6,4,7,5,4,5,14,4,1,4,5,3,1,2,3,3,1,0,4,3,1,0,3,7,3,2,9,0,1,1,0,1,2,6,5,10,2,4,2,1,8,6,4,5,5,6,1 94 6,0,4,5,1,1,7,1,4,3,3,1,1,1,2,0,2,2,0,0,2,4,9,3,4,4,2,1,4,3,2,4,0,3,1,0,1,0,0,1,2,2,2,6,2,1,4,0,0,4,1,2,0,2,2,0,1,4,1,2,1,4,0,6,1,2,0,1,1,2,2,2,2,1,1,1,4,0,1,3,0,3,1,6,3,5,1,0,3,3,3,1,2,3,2,3,5,1,1,3,0,4,2,0,0,1,0,0,1,5,2,3,0,6,11,1,1 116 0.983198 0 chr19 53446223 53446337 + ZNF761, chr19 53446191 53446379 h38_mk_AluSz - 1 SRR1444678, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 26,8,7,16,12,13,27,9,13,6,4,3,7,10,17,9,14,10,3,15,12,12,35,7,14,15,8,6,10,8,7,15,9,11,17,9,8,14,5,9,31,13,6,15,5,16,21,7,5,7,10,11,10,8,10,8,17,10,11,12,6,7,2,6,17,1,5,7,12,5,9,7,10,19,10,12,17,6,3,12,6,14,6,8,12,20,9,1,15,8,15,4,8,8,12,23,17,6,4,10,0,9,5,14,8,15,10,9,10,9,15,28,6,22,29,16,11 . . . chr19 53446227 53446337 + ZNF761, chr19 53446191 53446379 h38_mk_AluSz - 70 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1357478,SRR1360563,SRR1368772,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1408208,SRR1414897,SRR1416477,SRR1432123,SRR1433796,SRR1435020,SRR1435775,SRR1439873,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR661349,SRR661973,SRR662534,SRR814967,SRR818033, 93 7,0,4,5,1,1,7,1,4,1,3,1,1,1,2,0,2,2,0,0,3,4,8,3,4,5,2,1,4,3,2,4,0,3,1,0,1,0,0,1,2,3,2,6,2,1,4,0,0,5,1,2,0,2,2,0,2,5,1,2,1,4,0,7,1,2,0,0,1,2,2,3,2,2,1,1,5,0,1,4,0,3,1,6,3,6,1,0,4,4,3,1,2,3,2,3,5,1,1,4,0,4,2,0,0,1,0,0,1,5,2,4,0,6,11,1,1 116 26,8,7,16,12,13,27,9,13,6,4,3,7,10,17,9,14,10,3,15,12,12,35,7,14,15,8,6,10,8,7,15,9,11,17,9,8,14,5,9,31,13,6,15,5,16,21,7,5,7,10,11,10,8,10,8,17,10,11,12,6,7,2,6,17,1,5,7,12,5,9,7,10,19,10,12,17,6,3,12,6,14,6,8,12,20,9,1,15,8,15,4,8,8,12,23,17,6,4,10,0,9,5,14,8,15,10,9,10,9,15,28,6,22,29,16,11 117 0.998101 0 chr19 55064296 55064412 - RDH13, chr19 55064131 55064440 h38_mk_AluSc + 22 SRR1102055,SRR1326179,SRR1331579,SRR1337098,SRR1341365,SRR1387264,SRR1390601,SRR1399779,SRR1414897,SRR1432123,SRR1440986,SRR1468514,SRR1471943,SRR1485459,SRR595926,SRR601500,SRR602314,SRR602704,SRR657635,SRR662534,SRR814967,SRR818033, 71 0,1,1,0,0,1,5,3,0,0,2,2,0,1,3,0,4,2,1,0,3,0,10,1,1,4,3,1,1,0,0,4,0,1,0,2,1,0,0,4,2,1,0,2,3,2,2,0,1,1,0,2,2,0,1,1,1,0,1,2,0,2,1,2,1,0,0,1,0,1,1,0,2,2,0,0,5,0,0,2,0,1,0,2,0,1,0,0,1,0,2,0,0,4,1,0,5,0,3,1,0,0,0,0,3,2,0,4,0,2,1,2,0,4,3,3,1 68 0,0,0,7,1,0,3,0,0,1,3,1,1,0,5,0,4,1,1,0,5,0,0,2,1,0,1,0,4,0,2,2,2,2,0,1,0,0,0,0,1,2,0,5,3,1,3,0,0,2,0,2,0,2,0,0,2,0,0,3,0,0,0,1,5,3,0,1,2,1,0,1,1,1,0,2,4,1,0,5,1,2,0,3,1,1,0,0,1,0,3,0,0,3,2,2,6,0,1,3,0,0,2,0,3,4,0,1,2,0,9,4,0,8,4,1,0 . . . chr19 56397881 56397988 + ZNF582-AS1, chr19 56397735 56397976 h38_mk_AluJb - 105 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 25,7,44,60,47,33,72,39,64,39,41,24,25,42,56,47,32,63,12,33,28,27,132,35,44,21,51,40,45,55,39,55,25,58,32,40,53,49,17,53,44,40,53,31,53,61,46,30,15,56,30,36,18,24,19,43,38,38,24,50,43,45,32,60,77,21,14,24,42,33,51,58,53,36,13,35,57,40,45,42,40,65,23,44,44,72,21,13,51,20,33,6,33,40,40,61,55,50,35,70,0,52,46,41,94,71,30,36,47,104,83,58,48,82,62,63,19 109 8,0,2,13,2,0,3,11,11,4,9,5,6,9,9,5,8,5,4,0,4,8,17,9,2,3,11,6,9,7,14,16,2,17,7,10,24,7,0,11,9,4,0,4,11,8,7,4,4,7,3,4,2,3,5,5,15,6,0,16,7,10,5,10,10,2,3,4,3,4,6,6,7,5,2,10,12,4,9,10,4,7,4,12,8,8,1,2,9,2,10,0,4,12,8,2,11,3,4,9,1,12,4,0,10,14,7,13,9,14,15,8,1,10,6,9,4 . . . chr19 56397881 56398001 + ZNF582-AS1, chr19 56397735 56397976 h38_mk_AluJb - 2 SRR1318163,SRR1434526, 116 25,7,44,60,47,33,72,39,64,39,41,24,25,42,56,47,32,63,12,33,28,27,132,35,44,21,51,40,45,55,39,55,25,58,32,40,53,49,17,53,44,40,53,31,53,61,46,30,15,56,30,36,18,24,19,43,38,38,24,50,43,45,32,60,77,21,14,24,42,33,51,58,53,36,13,35,57,40,45,42,40,65,23,44,44,72,21,13,51,20,33,6,33,40,40,61,55,50,35,70,0,52,46,41,94,71,30,36,47,104,83,58,48,82,62,63,19 8 0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr19 56397881 56398048 + ZNF582-AS1, chr19 56397735 56397976 h38_mk_AluJb - 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 25,7,44,60,47,33,72,39,64,39,41,24,25,42,56,47,32,63,12,33,28,27,132,35,44,21,51,40,45,55,39,55,25,58,32,40,53,49,17,53,44,40,53,31,53,61,46,30,15,56,30,36,18,24,19,43,38,38,24,50,43,45,32,60,77,21,14,24,42,33,51,58,53,36,13,35,57,40,45,42,40,65,23,44,44,72,21,13,51,20,33,6,33,40,40,61,55,50,35,70,0,52,46,41,94,71,30,36,47,104,83,58,48,82,62,63,19 116 22,6,51,30,30,21,39,32,36,42,27,13,33,28,48,30,29,33,23,22,30,20,94,18,33,10,35,27,24,29,53,54,25,51,26,34,45,33,14,51,37,37,26,31,36,46,32,37,26,39,24,25,16,41,26,50,39,34,16,43,30,36,26,47,54,17,8,13,27,24,31,67,40,17,15,29,39,26,39,39,29,43,19,53,48,44,10,12,43,19,22,4,31,26,30,33,22,37,21,52,0,37,16,31,69,33,19,27,38,53,41,39,49,55,46,45,27 . . . chr19 56709799 56709856 + AC006115.1,AC006115.3, chr19 56709769 56709850 h38_mk_AluJo - 7 SRR1084842,SRR1340508,SRR1390601,SRR1435020,SRR818033,SRR662534,SRR818210, 36 0,0,0,1,3,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,2,1,4,1,0,0,0,0,1,2,2,0,0,1,0,0,2,1,0,1,0,3,0,1,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,2,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,1,1,0,0,0,0,0,1,0,1,1,4,0,3,2,0 40 0,0,0,3,0,1,3,0,2,1,1,0,0,0,0,0,0,0,0,0,0,2,3,0,1,0,0,1,3,0,0,1,0,1,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,1,2,0,0,0,0,0,4,0,1,1,0,0,1,0,0,0,0,3,0,0,2,2,0,0,0,0,2,0,0,1,1,4,0,0,0,2,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,1,0,0,2,0,0,0,0,2,2,0,2,2,4,0 . . . chr19 57756872 57756998 + ZNF587,ZNF776, chr19 57756847 57757145 h38_mk_AluJo - 10 SRR1453851,SRR1336548,SRR1340508,SRR1408208,SRR1418837,SRR1433796,SRR1440986,SRR1498550,SRR613627,SRR661973, 113 14,0,4,28,16,11,19,10,17,15,16,7,9,7,14,8,3,7,3,5,9,9,34,7,8,19,11,10,5,17,3,2,3,14,3,6,12,9,12,6,10,21,10,13,5,19,25,9,7,9,4,17,3,6,5,7,12,6,15,10,12,2,3,19,17,6,2,2,3,12,13,11,14,3,5,13,16,6,15,11,9,13,1,22,10,19,11,1,14,8,3,5,13,10,4,27,26,4,4,16,0,20,7,8,15,7,0,9,10,35,20,14,0,24,26,15,11 16 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,4,1,0,0,0,1,0,0,13,0,0,0,0,0,0,0 . . . chr19 57868458 57868579 - ZNF814, chr19 57868455 57868790 h38_mk_AluSp + 1 SRR1454803, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 56 3,0,1,1,3,1,0,0,0,0,0,0,0,0,0,3,0,0,1,0,0,1,0,0,3,0,1,0,3,1,0,2,0,3,0,2,1,0,0,1,0,3,3,4,0,0,4,0,2,0,0,4,0,0,2,5,5,0,1,4,0,0,1,1,1,2,0,0,3,0,1,1,2,0,0,1,0,0,4,0,0,2,0,3,2,2,1,0,0,0,0,0,1,0,4,0,3,0,1,1,1,1,1,0,3,0,2,0,2,0,5,0,0,3,0,0,0 90 0.083069 0 chr19 57923192 57923289 - ZNF417,ZNF418, chr19 57923008 57923331 h38_mk_AluSx + 114 SRR1084842,SRR1085495,SRR1315970,SRR1326179,SRR1331579,SRR1341365,SRR1348159,SRR1435020,SRR1439873,SRR1487685,SRR1498550,SRR662233,SRR1072367,SRR1077405,SRR1084649,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1328895,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435293,SRR1435775,SRR1437538,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1488651,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 21,19,18,20,13,19,10,13,19,18,15,15,9,17,12,14,12,14,8,8,9,10,35,14,16,8,23,10,15,25,10,22,6,27,6,8,15,9,4,18,17,24,14,13,17,14,26,16,14,12,24,18,9,9,7,19,34,15,11,16,20,11,21,17,27,10,8,3,18,25,24,7,16,16,14,10,28,15,14,12,12,22,6,11,27,42,11,13,6,7,17,5,10,14,16,6,17,12,3,26,2,8,11,30,25,30,9,19,15,41,18,14,24,27,10,13,7 116 6,3,5,10,3,8,5,4,12,9,8,1,6,13,13,15,5,9,4,0,3,5,30,11,4,7,10,7,6,7,2,14,3,10,6,10,7,2,1,12,11,7,4,9,10,10,7,4,3,7,7,8,9,2,7,11,12,3,6,7,15,7,1,5,17,4,3,1,10,16,10,13,10,8,2,10,18,4,4,6,4,9,7,7,14,18,2,4,3,3,6,2,7,9,10,7,4,3,4,14,1,4,6,7,12,3,1,6,7,27,22,12,5,12,9,11,4 118 0.933047 1 chr19 58143105 58143198 - ZNF329, chr19 58142960 58143244 h38_mk_AluJb + 2 SRR1387264,SRR1498550, 95 0,1,0,9,5,1,5,3,4,0,5,1,2,2,2,1,2,3,1,0,1,3,15,1,4,2,2,3,2,1,2,1,2,2,0,3,4,2,0,0,4,3,1,5,0,1,7,3,2,4,2,3,3,2,0,3,4,0,0,4,6,2,0,1,3,3,0,2,2,2,1,2,4,5,1,4,4,1,0,3,2,2,2,12,4,5,4,0,8,0,6,0,2,4,3,1,9,1,7,3,0,4,1,8,3,0,0,8,8,3,12,2,0,7,10,9,0 36 0,0,1,2,0,0,1,2,0,1,1,0,0,0,1,0,2,0,0,0,0,2,4,2,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,3,5,0,2,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,1,0,1,0,0,1,0,0,0,1,0,1,0,1,2,0,1,1,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,2,0,0,2 104 0.880718 0 chr19 6438447 6438534 - SLC25A23,SLC25A41, chr19 6438426 6438576 h38_mk_AluSz + 54 SRR1085495,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1356444,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1386708,SRR1389979,SRR1399779,SRR1421177,SRR1432123,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1453341,SRR1455925,SRR1457482,SRR1468955,SRR1471817,SRR1476571,SRR1488651,SRR1500868,SRR595926,SRR602516,SRR607337,SRR662233,SRR814967,SRR818033,SRR818210,SRR1356619,SRR1357478,SRR1408368,SRR1418127,SRR1453851,SRR1464373,SRR1468514,SRR1487362,SRR601500,SRR613627,SRR657635,SRR657754,SRR662534, 114 6,7,11,61,83,40,41,38,22,62,81,9,45,81,98,12,45,95,8,17,66,36,269,45,127,36,18,94,59,85,36,58,56,67,33,100,68,72,10,51,6,14,82,50,87,80,48,35,37,19,0,8,10,62,14,59,73,11,43,123,71,6,99,84,109,34,23,8,8,47,118,15,96,121,8,27,63,34,48,64,0,8,65,4,18,27,26,18,28,46,126,1,40,48,32,45,4,11,12,85,7,35,16,14,120,80,0,53,16,14,117,55,23,117,60,65,2 60 0,0,0,22,25,3,0,0,0,0,21,0,9,23,22,0,0,23,0,0,19,15,77,0,22,5,0,0,0,38,12,15,22,16,9,25,26,17,0,18,0,0,29,0,20,0,0,5,0,0,0,0,0,10,0,12,22,0,0,32,22,4,30,26,26,0,0,0,0,13,36,0,29,35,0,15,16,8,21,5,0,0,9,0,0,13,0,7,0,11,39,0,0,16,0,17,0,0,0,23,0,14,0,0,35,15,0,0,0,0,48,17,0,30,19,16,0 117 0.747639 0 chr19 7852807 7853183 + EVI5L, chr19 7852530 7852861 h38_mk_AluJo - 1 SRR1072367, 8 3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 95,27,75,199,105,87,92,116,144,139,140,90,82,103,162,118,80,161,33,37,147,58,545,133,88,98,184,81,133,87,89,143,48,157,67,150,116,166,65,152,153,136,115,171,142,135,144,73,93,85,122,117,65,85,117,74,179,83,160,175,112,101,68,241,195,73,35,107,85,113,162,79,242,105,56,160,178,116,57,172,106,152,46,161,178,61,35,30,50,103,197,15,83,171,89,157,193,51,104,149,11,97,68,44,227,173,38,66,188,224,257,181,57,217,143,256,43 . . . chr19 8241341 8241457 + CERS4, chr19 8241315 8241606 h38_mk_AluJ - 67 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1354446,SRR1356619,SRR1360563,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1413562,SRR1414897,SRR1416477,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602516,SRR602704,SRR613627,SRR614802,SRR657635,SRR658307,SRR661349,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 93 3,0,0,2,1,1,1,3,0,0,6,1,5,4,3,2,3,2,0,1,2,0,13,1,4,0,1,2,2,0,1,1,0,10,1,7,6,1,2,10,3,1,3,8,1,1,1,0,1,7,1,4,1,0,1,1,2,3,4,1,5,1,2,6,2,1,2,4,1,5,5,0,6,9,0,10,3,0,0,6,2,4,2,8,2,0,1,1,3,4,9,1,2,0,1,7,3,2,1,0,0,7,1,0,7,0,1,1,3,0,3,5,0,3,4,1,0 117 7,4,3,18,18,14,15,5,11,4,14,4,18,12,10,12,14,10,1,3,17,3,48,12,10,11,15,12,11,6,10,6,7,10,11,10,9,3,5,15,12,12,12,20,13,7,10,7,6,11,13,17,7,9,11,7,16,17,20,11,9,12,8,14,11,6,5,7,8,8,15,12,24,22,8,19,12,14,14,20,13,5,15,15,11,9,7,4,4,13,9,1,14,9,10,7,15,12,10,10,1,9,3,13,17,4,3,11,11,13,27,8,3,15,28,32,2 118 0.397648 1 chr19 8376962 8377067 - RAB11B-AS1, chr19 8377016 8377114 h38_mk_AluSx + 112 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 27,32,17,24,9,14,10,2,24,40,3,11,23,18,27,10,11,9,12,4,9,33,65,24,20,9,15,9,5,17,6,22,15,17,6,22,19,11,17,17,15,23,21,15,11,16,17,16,27,9,22,5,15,30,15,4,22,11,11,22,21,14,30,28,22,9,15,12,19,13,14,13,14,13,11,22,13,8,57,9,11,30,11,21,8,7,8,21,14,16,28,3,25,10,13,18,25,18,7,16,0,10,7,14,11,9,7,7,13,8,12,8,15,26,5,12,7 116 31,19,16,19,8,9,10,7,26,43,6,15,20,18,28,10,9,9,15,4,7,27,55,18,22,10,27,8,9,19,13,21,13,16,7,14,21,6,11,24,19,26,20,11,13,17,23,21,30,22,39,8,11,21,15,8,23,15,14,24,39,15,22,33,19,8,8,10,28,19,21,18,18,22,11,15,15,14,62,10,11,22,19,22,6,7,11,18,20,11,18,1,23,12,14,15,18,14,14,24,1,10,14,0,44,8,18,15,17,15,14,11,26,21,18,16,17 . . . chr19 8418537 8418807 + MARCH2, chr19 8418478 8418839 h38_mk_AluJ - 112 SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 19,12,15,20,26,23,30,12,27,31,17,18,15,17,21,22,8,23,12,12,16,10,81,14,25,20,23,18,23,16,29,15,25,22,14,19,29,25,11,29,20,37,21,18,29,15,20,31,15,22,18,12,17,21,38,21,28,15,22,38,51,11,9,47,39,18,11,37,25,29,28,18,20,18,19,22,29,18,21,19,19,43,19,18,28,23,8,13,24,22,27,3,22,14,14,10,21,12,17,25,1,14,9,1,51,19,4,9,19,31,33,20,7,18,27,25,12 117 69,65,105,100,89,69,85,76,88,131,64,88,75,105,104,55,61,110,65,37,93,33,381,49,79,80,134,93,92,94,85,79,78,121,92,91,85,101,63,137,121,133,103,104,107,95,95,83,66,71,75,79,59,88,102,86,135,66,93,130,141,57,98,170,151,76,67,80,97,66,101,84,99,99,72,74,124,86,77,80,94,159,94,87,159,105,52,58,106,90,100,21,77,65,78,78,81,56,75,93,11,70,48,26,197,105,28,85,85,111,164,77,46,125,98,110,77 118 0.654983 1 chr19 9333015 9333113 + ZNF559, chr19 9332957 9333269 h38_mk_AluJb - 15 SRR1326179,SRR1331579,SRR1337412,SRR1348159,SRR1387264,SRR1390601,SRR1464373,SRR1498550,SRR600361,SRR602314,SRR602516,SRR602704,SRR607337,SRR614802,SRR661349, 72 0,0,1,3,0,1,0,1,1,1,4,1,0,1,5,0,2,2,0,0,1,3,11,2,2,1,2,1,0,2,3,0,2,0,2,0,3,3,0,2,2,1,0,3,1,2,1,0,1,0,0,1,2,0,0,1,1,0,1,0,1,2,0,1,2,1,0,1,2,0,3,0,3,0,0,7,2,0,0,2,1,1,0,0,1,2,0,1,1,2,0,0,2,3,3,3,3,0,0,1,0,1,4,0,0,0,0,0,2,14,0,1,0,0,1,1,1 47 1,0,0,2,1,0,0,1,6,0,1,0,0,0,1,0,2,0,0,0,0,3,1,0,0,0,2,0,0,1,1,2,0,0,0,0,1,0,0,0,2,1,0,3,1,0,1,0,0,0,0,0,0,1,1,0,0,0,3,0,0,0,0,0,0,2,0,0,2,2,0,0,1,0,2,3,1,1,0,2,0,1,0,3,0,0,0,2,2,0,0,0,2,0,3,2,4,0,0,1,0,2,2,0,0,2,0,0,1,0,0,0,0,1,0,0,2 102 0.568139 0 chr19 9354264 9354478 + ZNF559-ZNF177, chr19 9354105 9354388 h38_mk_AluJo - 1 SRR661973, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 42 2,0,0,0,0,1,1,0,0,1,0,2,1,1,0,1,0,0,0,0,0,0,1,0,2,0,2,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,1,1,0,0,0,0,0,0,0,1,1,1,0,0,0,0,1,0,0,0,1,0,0,0,3,0,2,1,0,0,1,0,0,0,0,1,1,4,0,1,0,0,0,3,1,3,0,0,0,1,1,0,0,1,0,4,0,1,0,3,1,2,0,1,0,0,0,0 . . . chr19 9376316 9376423 + ZNF177,ZNF559,ZNF559-ZNF177, chr19 9376134 9376399 h38_mk_AluJ - 112 SRR1084842,SRR1099499,SRR1320115,SRR1326179,SRR1328895,SRR1340508,SRR1348159,SRR1354446,SRR1357478,SRR1360563,SRR1361567,SRR1368772,SRR1387264,SRR1390601,SRR1399779,SRR1416477,SRR1432123,SRR1433796,SRR1435020,SRR1437538,SRR1439873,SRR1453341,SRR1453851,SRR1457503,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1488651,SRR595926,SRR599510,SRR602314,SRR607337,SRR613627,SRR657777,SRR658307,SRR661349,SRR662233,SRR663633,SRR814967,SRR818033,SRR1085495,SRR1317344,SRR1318163,SRR1331579,SRR1335446,SRR1337412,SRR1341763,SRR1342045,SRR1367943,SRR1375571,SRR1389979,SRR1408368,SRR1413562,SRR1418837,SRR1421177,SRR1435293,SRR1444622,SRR1444678,SRR1454803,SRR1485459,SRR1487362,SRR1498550,SRR601500,SRR602516,SRR604262,SRR657635,SRR661973,SRR662534,SRR818210,SRR1072367,SRR1084649,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1320963,SRR1333741,SRR1336548,SRR1337098,SRR1341365,SRR1348360,SRR1356444,SRR1356619,SRR1381673,SRR1386708,SRR1387809,SRR1402900,SRR1408208,SRR1414897,SRR1415234,SRR1416754,SRR1418127,SRR1434526,SRR1435775,SRR1440986,SRR1442571,SRR1447693,SRR1455925,SRR1457482,SRR1464373,SRR1471817,SRR1474777,SRR1476571,SRR1487194,SRR1487685,SRR1500868,SRR600361,SRR602704,SRR604456,SRR614802,SRR657754, 114 7,3,3,22,7,9,5,12,13,8,24,3,4,4,11,11,12,8,4,3,5,6,30,6,5,4,16,7,9,12,14,7,0,8,12,4,11,6,8,14,14,11,10,20,12,8,17,6,15,10,8,13,9,3,11,8,12,6,10,9,5,7,9,12,13,7,9,8,8,11,12,11,15,10,7,10,13,12,4,14,7,13,5,21,14,13,14,8,15,4,15,3,8,13,14,14,22,7,12,19,0,16,15,1,25,22,7,7,9,36,14,8,8,26,33,12,0 115 16,6,14,26,5,17,23,8,22,10,23,5,10,6,19,7,20,13,7,9,9,9,49,13,15,6,17,9,12,18,17,11,9,6,8,9,10,8,14,18,21,18,7,11,12,21,18,15,15,8,19,13,9,10,14,19,16,12,14,14,9,4,13,13,15,9,8,7,17,19,19,16,15,12,8,10,30,12,11,22,9,24,12,19,12,19,10,9,14,9,26,7,13,14,12,19,27,15,8,20,0,24,12,0,18,44,10,25,18,54,14,11,6,22,38,12,5 . . . chr19 9433668 9433783 - ZNF266, chr19 9433661 9433984 h38_mk_AluSz + 8 SRR1318163,SRR1328895,SRR1348360,SRR1368772,SRR1386708,SRR1444678,SRR1474777,SRR602516, 103 1,0,0,10,3,4,5,2,1,5,2,2,1,2,5,2,4,2,2,1,4,0,6,7,2,6,4,2,1,3,1,0,1,2,1,2,3,2,2,5,4,7,0,2,0,2,5,1,5,2,1,1,3,0,1,1,4,2,1,1,2,1,1,5,2,1,2,6,1,3,3,5,4,1,0,5,1,2,1,3,2,2,1,4,8,7,0,0,7,2,0,4,5,2,2,4,5,2,5,3,0,6,1,0,2,1,0,8,4,4,3,4,7,7,3,1,2 49 0,2,1,0,0,0,0,1,0,0,3,1,0,0,0,2,1,2,1,0,0,0,2,1,0,0,3,2,0,0,2,0,0,0,1,0,2,0,0,2,2,0,1,1,0,0,0,1,1,0,0,0,0,0,0,1,0,0,1,1,1,0,0,0,1,1,0,1,0,0,0,3,0,1,0,0,2,0,0,0,1,1,0,2,0,1,0,0,0,0,0,0,2,3,0,2,2,0,0,0,0,1,2,0,0,2,0,0,0,1,0,1,0,1,5,3,1 . . . chr19 9433668 9433786 - ZNF266, chr19 9433661 9433984 h38_mk_AluSz + 59 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1367943,SRR1375571,SRR1387264,SRR1387809,SRR1390601,SRR1408208,SRR1413562,SRR1414897,SRR1416754,SRR1432123,SRR1439873,SRR1440986,SRR1453851,SRR1454803,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR599510,SRR600361,SRR601500,SRR602704,SRR604456,SRR607337,SRR613627,SRR657635,SRR658307,SRR661349,SRR661973,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 103 1,0,0,10,3,4,5,2,1,5,2,2,1,2,5,2,4,2,2,1,4,0,6,7,2,6,4,2,1,3,1,0,1,2,1,2,3,2,2,5,4,7,0,2,0,2,5,1,5,2,1,1,3,0,1,1,4,2,1,1,2,1,1,5,2,1,2,6,1,3,3,5,4,1,0,5,1,2,1,3,2,2,1,4,8,7,0,0,7,2,0,4,5,2,2,4,5,2,5,3,0,6,1,0,2,1,0,8,4,4,3,4,7,7,3,1,2 84 3,0,4,6,2,2,4,2,3,3,5,3,0,1,5,0,2,2,2,1,3,0,9,1,0,3,3,0,1,1,1,0,1,1,0,3,0,6,0,1,2,3,0,2,2,0,4,1,1,4,0,0,3,1,1,4,2,1,5,4,0,1,0,4,3,2,1,0,2,1,3,3,0,4,0,1,3,2,0,3,1,0,0,3,2,2,0,0,0,1,0,2,5,4,0,0,7,1,5,3,0,8,2,0,3,2,0,13,7,4,0,1,0,8,6,2,3 107 0.926040 0 chr19 9433693 9433783 - ZNF266, chr19 9433661 9433984 h38_mk_AluSz + 3 SRR1386708,SRR1389979,SRR1474777, 54 1,0,1,3,0,1,1,2,0,1,0,0,1,0,0,0,1,0,1,0,1,1,1,1,3,2,2,0,1,0,1,0,0,0,0,0,0,1,0,1,0,0,3,0,1,0,1,2,2,1,3,0,1,0,1,1,0,0,2,2,0,0,0,3,1,0,0,0,2,0,0,0,0,1,0,0,2,0,0,0,0,3,1,1,1,2,0,0,1,0,0,2,3,3,1,0,0,0,3,2,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,1 49 0,2,1,0,0,0,0,1,0,0,3,1,0,0,0,2,1,2,1,0,0,0,2,1,0,0,3,2,0,0,2,0,0,0,1,0,2,0,0,2,2,0,1,1,0,0,0,1,1,0,0,0,0,0,0,1,0,0,1,1,1,0,0,0,1,1,0,1,0,0,0,3,0,1,0,0,2,0,0,0,1,1,0,2,0,1,0,0,0,0,0,0,2,3,0,2,2,0,0,0,0,1,2,0,0,2,0,0,0,1,0,1,0,1,5,3,1 . . . chr19 9433693 9433786 - ZNF266, chr19 9433661 9433984 h38_mk_AluSz + 29 SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1316940,SRR1335446,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1408208,SRR1413562,SRR1416754,SRR1418837,SRR1421177,SRR1434526,SRR1435020,SRR1439873,SRR1440986,SRR1447693,SRR1468514,SRR1487362,SRR599510,SRR600361,SRR601500,SRR604456,SRR607337,SRR814967,SRR821602, 54 1,0,1,3,0,1,1,2,0,1,0,0,1,0,0,0,1,0,1,0,1,1,1,1,3,2,2,0,1,0,1,0,0,0,0,0,0,1,0,1,0,0,3,0,1,0,1,2,2,1,3,0,1,0,1,1,0,0,2,2,0,0,0,3,1,0,0,0,2,0,0,0,0,1,0,0,2,0,0,0,0,3,1,1,1,2,0,0,1,0,0,2,3,3,1,0,0,0,3,2,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,1 84 3,0,4,6,2,2,4,2,3,3,5,3,0,1,5,0,2,2,2,1,3,0,9,1,0,3,3,0,1,1,1,0,1,1,0,3,0,6,0,1,2,3,0,2,2,0,4,1,1,4,0,0,3,1,1,4,2,1,5,4,0,1,0,4,3,2,1,0,2,1,3,3,0,4,0,1,3,2,0,3,1,0,0,3,2,2,0,0,0,1,0,2,5,4,0,0,7,1,5,3,0,8,2,0,3,2,0,13,7,4,0,1,0,8,6,2,3 99 0.858783 0 chr19 9620916 9621049 - ZNF561, chr19 9620751 9621017 h38_mk_AluSx + 11 SRR1099499,SRR1314163,SRR1326179,SRR1328895,SRR1335446,SRR1337098,SRR1361567,SRR1433796,SRR1455925,SRR602704,SRR604456, 73 0,0,4,3,1,2,1,1,0,0,0,0,0,1,2,2,0,0,3,0,1,1,5,0,2,1,1,0,1,0,0,0,4,0,1,3,2,0,0,2,2,0,1,0,3,1,0,0,0,1,2,0,0,1,0,4,2,1,0,0,1,1,3,2,0,0,2,2,1,3,1,1,4,3,1,3,4,0,0,2,0,1,0,0,2,5,4,0,2,1,2,1,1,0,3,4,4,0,2,0,0,1,0,3,8,1,0,2,1,11,10,0,0,2,4,1,4 26 1,0,2,0,0,1,0,2,0,0,0,0,1,1,3,1,1,0,2,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,0,3,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 111 0.325023 0 chr19 9626784 9626860 + ZNF561-AS1, chr19 9626746 9627074 h38_mk_AluJb - 98 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387809,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR658307,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 5,2,1,7,1,5,7,1,3,10,1,2,1,6,10,10,6,11,5,2,5,4,22,9,19,3,4,4,8,4,4,4,5,8,2,3,4,7,1,9,1,3,3,8,1,5,7,2,4,3,1,8,3,5,3,2,1,2,5,5,8,3,8,2,4,1,2,3,3,0,9,1,7,2,4,5,5,2,4,4,6,3,4,6,6,6,6,3,2,3,8,2,3,5,1,13,4,2,7,4,0,3,1,5,6,3,4,7,1,15,8,5,4,12,7,8,4 109 5,3,4,5,5,3,3,4,5,5,2,1,4,5,8,5,12,8,4,3,7,8,16,0,13,8,4,6,3,4,3,4,3,5,4,4,6,3,4,6,0,6,2,6,4,4,10,5,6,7,4,3,2,7,1,4,3,5,4,5,13,6,4,6,6,3,5,3,7,0,2,2,4,4,3,5,5,1,6,4,5,6,2,5,9,7,5,3,12,4,9,1,7,1,2,7,5,4,7,7,1,4,9,0,2,0,0,4,0,10,12,2,0,7,17,4,2 117 0.999223 0 chr19 9752305 9752440 - ZNF846, chr19 9752316 9752645 h38_mk_AluSx + 5 SRR1326179,SRR1348360,SRR1368772,SRR1375571,SRR1474553, 8 0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 9,25,6,6,4,4,1,1,1,8,5,2,3,2,8,1,1,4,2,1,3,11,11,3,6,6,8,5,2,13,1,7,2,0,3,7,6,2,5,6,11,8,5,3,1,4,5,4,7,2,12,4,2,8,4,4,7,6,3,3,3,3,6,4,6,6,3,8,10,4,4,2,7,3,3,3,4,3,7,5,3,5,1,11,6,3,5,3,5,4,8,4,5,8,6,8,5,4,2,10,1,7,4,40,6,7,7,9,7,17,6,5,1,14,7,13,2 . . . chr1 99974971 99975069 + SLC35A3, chr1 99974935 99975250 h38_mk_AluJb - 1 SRR1341763, 5 0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0 57 3,2,1,0,1,1,0,0,0,3,0,1,1,0,1,0,0,0,0,0,1,0,4,3,1,1,2,0,1,1,0,0,2,0,0,1,1,0,0,0,2,1,1,2,0,0,0,1,3,0,0,1,0,1,3,0,0,0,1,0,1,0,0,0,0,0,1,1,1,0,0,0,0,1,0,0,4,0,0,0,1,0,2,2,1,1,0,0,2,0,1,3,0,0,1,1,1,0,0,0,2,0,0,0,3,1,3,0,1,0,0,2,1,1,3,1,0 102 0.251239 0 chr19 9992694 9992880 - COL5A3, chr19 9992498 9992803 h38_mk_AluSx1 + 1 SRR1331579, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 4,12,46,56,23,16,28,16,23,61,33,15,17,10,18,14,17,21,18,1,17,18,30,25,21,20,41,14,18,22,29,23,9,26,26,7,8,15,11,28,13,56,10,33,22,16,29,18,9,25,10,19,9,34,18,16,39,13,23,13,3,7,12,31,42,27,13,19,27,23,16,5,36,28,16,29,73,28,2,22,22,22,20,23,34,16,28,7,7,8,30,7,20,13,18,17,28,0,23,25,4,36,16,0,22,16,12,40,19,36,16,40,12,33,31,54,7 . . . chr20 21590945 21591247 + LINC01727, chr20 21590898 21591221 h38_mk_AluJo - 3 SRR1320115,SRR1336548,SRR1435293, 10 0,0,0,0,0,0,0,2,0,2,0,0,1,0,0,0,0,0,0,3,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0 41 0,0,0,0,0,0,1,0,1,0,1,0,2,0,0,0,0,1,0,1,0,0,3,1,2,0,1,1,0,0,0,0,0,3,1,0,0,1,0,0,1,0,0,2,0,0,0,0,1,0,0,0,0,1,0,0,0,0,3,0,2,0,1,0,2,0,1,0,0,0,1,0,0,4,2,0,2,0,2,0,0,0,0,3,2,0,0,0,2,3,2,0,0,0,0,1,2,3,1,2,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0 105 0.100350 0 chr20 2486641 2486763 - SNRPB,ZNF343, chr20 2486484 2486791 h38_mk_AluSp + 38 SRR1455925,SRR1457482,SRR1468514,SRR657754,SRR1072367,SRR1102055,SRR1315970,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1357478,SRR1361567,SRR1367943,SRR1387264,SRR1389979,SRR1415234,SRR1418837,SRR1433796,SRR1434526,SRR1440986,SRR1453341,SRR1457503,SRR1464373,SRR1471943,SRR1487194,SRR600361,SRR601500,SRR602314,SRR602704,SRR604456,SRR607337,SRR614802, 74 2,0,0,0,0,0,2,0,2,2,3,0,0,1,3,1,3,2,2,0,1,0,5,2,2,2,2,3,0,1,0,1,0,0,2,2,1,0,1,0,3,0,3,0,0,0,1,0,0,1,1,1,0,1,2,0,1,1,1,2,0,0,0,1,3,1,1,1,0,4,0,0,3,2,1,1,6,0,0,4,1,2,0,0,2,1,1,1,0,0,1,0,3,2,2,2,2,1,1,4,0,1,1,0,1,6,0,0,1,3,2,0,3,1,2,0,1 110 1,3,6,14,4,1,5,8,3,2,6,3,3,2,4,1,11,8,2,3,5,2,10,4,4,6,9,4,3,3,1,4,2,4,5,6,7,3,1,3,3,3,3,11,5,7,6,1,3,2,4,4,1,2,2,3,8,5,5,6,6,3,0,10,7,1,3,0,4,11,2,6,10,3,3,6,14,1,5,7,0,11,1,7,7,5,5,1,4,4,9,0,5,8,3,10,11,4,4,5,0,1,3,6,3,12,0,13,7,7,8,6,3,12,4,12,0 117 0.591987 0 chr20 25634049 25634170 + ZNF337-AS1, chr20 25634019 25634337 h38_mk_AluSx1 - 1 SRR1316940, 58 0,0,3,3,0,2,0,0,2,3,0,1,2,2,2,0,0,0,0,0,2,2,0,1,1,2,0,1,0,0,1,1,0,2,0,3,0,0,0,1,2,0,0,2,2,2,1,1,0,0,0,2,1,0,0,3,1,0,1,0,1,0,0,2,0,2,1,1,1,0,1,0,1,2,0,0,2,0,0,1,1,0,0,3,1,0,1,0,2,0,0,0,0,4,1,0,0,0,0,2,1,0,0,0,1,0,0,0,1,1,0,0,0,3,1,2,1 2 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 . . . chr20 31487032 31487195 + LINC00028, chr20 31486851 31487150 h38_mk_AluJb - 1 SRR1342045, 6 0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0 14 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,3,0,0,0,0 . . . chr20 32371778 32371874 + ASXL1, chr20 32371607 32371906 h38_mk_AluJ - 3 SRR1476571,SRR1487685,SRR661973, 39 1,0,2,1,0,0,1,1,0,1,0,0,1,0,0,0,3,0,1,0,0,1,3,0,0,0,0,0,0,0,4,0,0,0,1,1,1,0,2,0,1,3,0,0,4,0,0,0,2,0,0,0,0,0,0,0,0,3,0,1,0,1,0,0,2,0,0,0,0,0,0,0,1,1,0,0,2,0,0,0,0,0,2,0,2,1,5,0,1,2,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,2,0,0,0,3,0,0,0,0,0,3,0 18 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,3,0,0,3,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,3,0,1,0,3,0,0,0,0,0,3,0,0,0,0,0,0,0,3,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,3,0,0,0,0,0,0,1,0,0,0,0,3,0,0 117 0.087578 0 chr20 32640566 32640687 - C20orf203, chr20 32640400 32640732 h38_mk_AluSz + 7 SRR1402900,SRR1408208,SRR1413562,SRR1416754,SRR1447693,SRR1488651,SRR600361, 96 0,0,1,6,0,2,5,2,3,0,1,6,1,3,5,2,1,0,5,0,3,0,0,4,4,1,13,6,3,8,4,3,0,0,6,2,1,2,1,5,1,2,3,3,1,4,3,3,3,6,1,11,3,6,4,11,11,3,2,2,0,1,5,0,8,1,3,0,4,2,3,4,6,0,2,3,3,7,1,0,2,5,1,3,3,0,3,4,4,2,5,0,6,2,3,2,0,1,1,4,0,8,2,0,8,4,1,5,5,19,10,2,2,8,15,2,0 43 0,0,0,1,0,0,0,2,0,0,0,0,1,0,2,1,0,0,1,0,0,0,1,2,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,1,1,1,1,1,2,2,0,2,1,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,1,0,0,0,1,0,0,1,0,0,0,1,1,0,1,1,0,0,1,0,3,0,1,1,1,0,0,1,0,0,0,0,0,1,0,2,0,0,3,0,0,1,1,0,0 . . . chr20 32651018 32651166 - C20orf203, chr20 32651044 32651386 h38_mk_AluJo + 24 SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1328895,SRR1341763,SRR1348159,SRR1356619,SRR1389979,SRR1399779,SRR1408368,SRR1414897,SRR1432123,SRR1454803,SRR1455925,SRR1474777,SRR1485459,SRR595926,SRR600361,SRR613627,SRR814967,SRR818033,SRR818210, 71 1,0,0,2,1,1,4,0,3,1,4,0,1,0,2,2,1,0,0,0,0,0,0,2,3,0,6,0,0,0,2,2,0,0,1,3,0,1,0,1,2,3,2,1,2,0,2,3,1,2,0,2,0,1,1,2,4,2,1,1,0,0,2,2,2,0,2,0,1,1,0,2,3,1,0,1,3,4,0,1,1,1,1,3,0,0,0,0,0,1,3,0,2,1,1,0,1,0,1,2,0,2,0,0,0,2,0,0,0,0,5,1,0,1,5,5,1 88 0,0,0,5,2,3,2,2,2,3,7,1,0,5,2,2,1,1,1,1,2,0,4,2,4,0,6,4,3,0,4,1,0,1,0,1,0,0,3,1,0,1,3,11,2,3,3,2,1,2,1,6,0,0,3,1,6,4,0,2,1,3,0,1,4,0,4,1,3,0,0,3,3,2,2,1,2,1,0,3,1,7,0,4,5,0,1,2,1,0,2,0,3,2,2,4,4,0,2,6,1,3,1,3,0,1,0,0,3,4,1,2,2,6,11,3,0 . . . chr20 34417117 34417239 + ITCH, chr20 34417091 34417406 h38_mk_AluSp - 2 SRR1474553,SRR657754, 31 0,0,0,1,2,0,1,0,0,0,0,0,2,0,1,0,2,0,2,0,1,0,1,0,1,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,2,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,1,0,1,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,1,0,2,0,1,0 34 0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,3,0,0,0,1,0,2,0,0,1,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,1,0,1,0,0,1,0,1,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,1,0,1,0,0,0,2,0,1,0,1,0,0,1,2,2,0,0,0,0,0,0,0,0,1,1,2,0,0,0,0,1,0,0,0,2,0,0,1,5,0,1,0,2,1,1,0 116 0.037242 0 chr20 34975400 34975499 + MYH7B, chr20 34975199 34975524 h38_mk_AluJb - 44 SRR1072367,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348360,SRR1356444,SRR1356619,SRR1387264,SRR1387809,SRR1402900,SRR1413562,SRR1415234,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1442571,SRR1447693,SRR1453341,SRR1453851,SRR1457482,SRR1464373,SRR1471943,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR600361,SRR602314,SRR604262,SRR613627,SRR657754,SRR661973,SRR662233,SRR814967,SRR818210, 84 2,3,0,1,1,2,3,0,2,1,1,2,2,2,6,0,1,0,1,1,3,3,10,11,1,0,1,4,0,2,4,0,0,1,3,0,0,0,0,2,1,4,0,0,1,2,4,2,5,1,4,1,1,3,2,0,2,3,2,1,1,1,0,1,2,1,1,1,2,2,2,4,0,2,1,3,2,0,1,3,1,0,0,2,3,0,1,2,4,2,0,0,2,0,2,0,1,1,0,3,0,5,1,0,1,1,0,0,0,7,5,1,0,2,3,6,0 85 2,3,3,2,2,4,2,0,2,1,3,2,2,2,5,0,1,2,1,1,1,3,3,5,1,0,1,1,0,1,4,0,0,1,1,0,2,1,1,0,2,6,0,2,1,3,1,0,5,1,6,1,1,0,2,1,6,5,4,0,0,0,1,0,3,2,0,1,4,5,1,0,0,1,0,3,1,0,2,3,2,3,1,4,7,0,2,0,2,1,1,0,1,2,3,1,0,2,0,1,0,3,0,0,1,2,0,3,0,2,2,3,0,3,1,3,0 99 0.954775 0 chr20 35692249 35692370 - NFS1, chr20 35692207 35692421 h38_mk_AluSx3 + 6 SRR1399779,SRR1457503,SRR1468514,SRR1474553,SRR604456,SRR661973, 100 1,2,2,2,3,5,4,0,4,1,1,2,1,1,4,8,6,4,1,0,2,3,4,2,4,2,5,3,4,1,5,2,6,4,3,2,6,2,2,4,2,3,1,1,3,5,5,1,3,3,5,3,2,0,1,0,2,1,2,2,1,1,0,3,4,2,0,2,5,0,3,0,3,5,6,2,13,1,0,1,4,3,1,3,5,4,4,0,2,3,1,0,3,0,5,8,4,1,6,5,1,1,3,0,4,3,0,6,7,10,5,0,2,4,4,0,0 38 1,0,3,1,1,0,0,1,1,0,1,1,0,1,0,0,0,0,0,0,0,1,1,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,1,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,2,3,1,1,0,2,1,0,0,1,2,1,0,3,0,0,0,0,0,0,1,0,1,2,0,0,0,0,0,1,0,0,2,0,9,0,0,0,0,0,2,0 117 0.075052 0 chr20 35782328 35782609 + PHF20, chr20 35782234 35782588 h38_mk_AluSz - 1 SRR1340508, 11 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 17 0,0,2,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,1,0,0,0,0,4,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,2,2,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0 115 0.034469 0 chr20 37298763 37298879 + MANBAL, chr20 37298732 37299051 h38_mk_AluJb - 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 23,8,25,64,17,28,25,35,27,31,27,28,29,18,42,28,45,29,6,8,41,31,140,26,49,22,27,16,39,42,38,19,14,34,18,26,45,20,20,40,16,28,29,28,26,29,38,20,21,22,11,29,18,20,17,25,32,27,25,38,39,20,22,49,45,18,23,13,29,19,41,24,56,34,11,51,58,28,19,18,43,40,27,54,40,45,24,9,44,24,35,8,34,31,26,48,61,23,18,32,0,45,17,3,91,38,24,25,38,58,87,42,15,44,35,53,8 117 38,8,37,108,47,45,77,41,58,56,70,49,38,38,89,39,82,46,24,21,65,32,269,41,67,40,57,51,79,49,57,52,35,67,34,71,89,50,30,76,72,50,46,63,47,63,74,28,41,37,31,51,28,44,39,56,73,38,65,92,50,48,34,86,72,42,34,30,66,37,92,52,129,59,24,59,101,42,43,66,68,62,44,91,80,69,63,13,63,34,86,10,67,68,66,116,105,46,52,69,5,93,33,13,76,95,25,32,80,88,114,62,18,105,88,116,20 118 0.995951 1 chr20 38019005 38019144 - TTI1, chr20 38018857 38019171 h38_mk_AluJb + 1 SRR1340508, 28 0,0,0,1,0,0,2,0,0,0,1,0,0,1,0,0,0,1,0,0,3,0,4,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,1,1,0,0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,3,0,3,0,0,0,1,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,2,2,0 16 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0 109 0.103008 0 chr20 3809897 3810014 + LINC01730, chr20 3809850 3810192 h38_mk_AluJo - 5 SRR1084649,SRR1331579,SRR1348159,SRR1440986,SRR818033, 30 0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,2,1,0,1,0,0,0,0,1,0,1,1,0,1,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,1,1,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,2,1,1,0,1,0,0,1,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 39 0,0,3,0,1,1,0,0,0,0,0,0,0,0,0,1,4,1,0,2,1,0,1,1,2,0,1,0,1,1,0,1,0,0,0,0,0,0,0,4,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,1,0,0,4,1,1,1,0,0,0,0,0,2,1,1,1,0,2,0,1,0,5,3,0,4,0,0,0,0,0,0,0,0,0,7,0,0 . . . chr20 38425935 38426052 - SNHG17, chr20 38425791 38426089 h38_mk_AluJb + 24 SRR1072367,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1326179,SRR1331579,SRR1333741,SRR1337412,SRR1348159,SRR1356619,SRR1360128,SRR1390601,SRR1408208,SRR1414897,SRR1440986,SRR1444622,SRR1453341,SRR1487685,SRR1498550,SRR602516,SRR662534,SRR663633,SRR814967, 95 1,1,6,1,4,1,3,2,4,4,0,1,0,2,4,1,8,2,3,0,2,3,6,0,1,0,2,2,1,2,5,2,3,3,1,0,3,2,3,0,2,2,3,2,5,4,1,1,4,2,0,3,2,1,1,2,2,1,1,4,0,1,1,1,3,5,3,1,3,1,2,0,1,3,0,4,1,3,2,3,0,3,1,0,0,5,3,2,11,2,1,0,1,1,4,3,3,3,0,1,0,2,2,0,6,4,0,0,0,0,3,3,3,4,1,1,2 58 2,0,0,3,0,3,1,0,5,2,2,1,0,0,2,1,4,8,0,0,1,1,1,0,2,8,3,0,0,0,1,2,2,1,1,0,0,1,0,0,0,1,0,4,0,0,5,0,0,2,3,0,0,2,2,3,1,0,0,1,0,4,0,0,5,0,3,0,0,3,1,4,1,0,0,0,0,1,1,1,0,0,0,0,2,0,3,0,4,0,6,0,0,0,1,1,0,0,2,0,0,1,0,0,0,1,0,4,0,0,0,1,1,1,0,1,0 118 0.284156 1 chr20 3891244 3891411 + PANK2, chr20 3891027 3891369 h38_mk_AluJ - 2 SRR1402900,SRR818033, 14 0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0 84 1,2,0,6,6,2,1,3,2,1,4,2,0,0,5,2,4,4,0,1,0,0,11,1,0,5,0,2,0,1,2,4,1,5,2,0,1,0,0,0,6,4,0,4,1,2,7,0,3,3,0,1,0,0,2,0,5,1,4,2,2,2,0,1,1,6,1,1,3,2,1,3,1,1,0,3,6,3,0,3,0,2,0,4,1,3,0,0,5,0,2,0,1,2,4,13,9,4,3,1,0,2,2,0,1,7,1,2,3,4,15,1,0,0,4,4,0 117 0.050916 0 chr20 41133487 41133645 - PLCG1-AS1, chr20 41133534 41133690 h38_mk_AluSq2 + 92 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602704,SRR604262,SRR604456,SRR607337,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR818033, 114 4,0,8,24,13,18,8,8,8,23,14,8,5,15,14,4,18,5,7,4,16,9,44,8,13,10,13,9,8,19,12,4,10,7,8,3,9,9,6,6,14,18,3,11,4,11,13,6,17,9,6,8,6,11,7,9,13,5,7,7,19,0,8,9,22,7,6,7,7,10,12,4,10,12,15,22,12,2,11,5,6,13,10,12,20,7,13,9,27,9,9,1,6,11,6,4,13,8,9,10,3,5,10,0,12,23,17,30,10,27,16,11,6,13,18,12,1 111 3,2,3,5,8,9,1,3,6,13,7,4,8,11,14,0,3,7,5,1,4,7,19,0,6,2,6,7,3,19,4,7,9,1,9,2,6,5,9,6,4,11,4,6,2,5,3,7,6,5,3,4,7,4,12,2,7,2,6,7,5,7,8,7,16,12,4,3,5,1,1,2,0,8,8,5,14,3,12,5,3,6,5,4,5,5,18,4,16,6,3,0,6,8,3,1,4,6,2,3,1,3,0,0,14,21,12,11,7,11,2,7,9,1,4,3,2 . . . chr20 44214888 44215003 + OSER1-AS1, chr20 44214861 44215055 h38_mk_AluSz6 - 115 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 25,7,16,48,28,26,62,23,35,38,30,24,20,17,41,33,29,46,0,20,29,16,107,25,26,18,32,11,46,23,30,26,9,38,30,21,67,34,16,27,29,41,23,31,22,40,51,29,27,45,15,18,13,27,13,16,41,21,28,39,30,28,19,52,45,23,18,17,19,14,52,29,70,33,18,27,23,22,21,30,20,44,32,42,37,19,19,9,37,10,37,1,25,24,26,48,34,20,27,34,2,27,11,5,37,55,6,10,24,39,35,24,8,62,47,38,21 116 19,2,22,28,21,15,59,20,39,25,18,17,13,14,35,14,13,32,2,16,28,9,83,18,28,11,29,18,41,16,30,25,10,25,19,16,52,24,12,22,30,42,13,31,18,18,45,20,19,37,12,22,16,13,10,10,28,15,21,27,29,13,12,35,24,13,8,8,14,13,38,22,38,33,11,21,33,11,19,22,16,19,36,32,26,19,8,12,22,18,28,3,19,19,25,32,32,13,17,31,0,24,8,18,12,26,8,7,29,60,31,21,16,56,39,34,6 118 0.660270 1 chr20 44214956 44215003 + OSER1-AS1, chr20 44214861 44215055 h38_mk_AluSz6 - 1 SRR1085495, 4 0,0,0,2,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 19,2,22,28,21,15,59,20,39,25,18,17,13,14,35,14,13,32,2,16,28,9,83,18,28,11,29,18,41,16,30,25,10,25,19,16,52,24,12,22,30,42,13,31,18,18,45,20,19,37,12,22,16,13,10,10,28,15,21,27,29,13,12,35,24,13,8,8,14,13,38,22,38,33,11,21,33,11,19,22,16,19,36,32,26,19,8,12,22,18,28,3,19,19,25,32,32,13,17,31,0,24,8,18,12,26,8,7,29,60,31,21,16,56,39,34,6 118 0.495682 1 chr20 45403080 45403145 - TP53TG5, chr20 45402857 45403175 h38_mk_AluJ + 11 SRR1318163,SRR1326179,SRR1399779,SRR1408368,SRR1415234,SRR1433796,SRR1437538,SRR1447693,SRR661973,SRR814967,SRR821602, 17 0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,1,0,1,0,0,5,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,1,0,0,1 52 5,0,1,1,0,6,0,0,0,4,0,2,2,0,6,6,2,0,0,0,0,1,5,0,0,0,0,0,1,0,1,1,1,0,0,0,1,3,0,0,0,5,0,1,2,0,0,1,0,0,10,1,0,0,0,1,5,1,0,1,0,0,2,0,1,2,1,0,7,3,3,0,0,0,0,0,8,0,3,1,0,0,0,0,1,0,1,0,0,1,0,3,0,0,2,0,0,0,0,0,0,0,0,2,0,4,4,0,4,19,3,7,0,3,0,0,3 62 0.747024 0 chr20 49179122 49179244 - STAU1, chr20 49179088 49179282 h38_mk_AluSq2 + 95 SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 113 2,1,6,18,6,10,11,6,6,10,7,7,10,4,7,9,14,12,5,5,7,1,29,6,9,8,13,6,11,10,3,6,7,6,6,11,5,11,2,8,17,11,7,12,4,9,16,2,4,3,5,6,5,7,4,8,13,8,9,10,7,5,2,18,9,6,1,7,7,6,13,0,24,10,8,15,8,2,1,12,5,8,5,9,11,9,11,0,2,3,6,4,1,11,4,8,16,5,3,12,0,6,6,0,23,6,12,9,11,46,28,7,1,25,23,26,3 110 4,1,5,10,5,9,3,2,4,5,8,5,5,7,4,1,7,6,4,2,8,4,17,4,4,6,8,5,4,5,7,5,1,2,6,6,1,5,1,8,3,5,4,11,4,6,9,2,4,0,3,7,1,3,1,5,8,6,6,8,5,2,1,7,10,4,0,7,3,1,5,2,7,8,2,9,6,5,3,8,4,8,5,9,4,3,4,0,7,3,8,2,6,13,1,7,14,2,5,5,0,0,4,0,10,7,9,0,10,14,5,10,1,18,7,8,1 118 0.240735 1 chr20 49331380 49331455 + AL035685.1, chr20 49331332 49331653 h38_mk_AluJb - 8 SRR1084842,SRR1340508,SRR1341365,SRR1360563,SRR1414897,SRR1444678,SRR1498550,SRR602704, 61 0,0,0,3,2,0,0,0,1,2,3,0,0,0,0,2,0,0,0,0,1,0,4,3,1,0,1,0,0,0,1,0,0,1,2,2,0,2,5,0,4,4,0,3,0,2,3,1,2,1,1,1,0,2,2,0,2,0,1,0,5,0,1,1,4,1,0,5,1,0,0,2,1,4,0,0,0,1,1,1,0,5,0,1,1,0,0,0,4,1,3,0,0,0,3,1,2,0,2,2,0,0,0,0,2,2,0,0,3,0,2,4,0,2,0,0,0 19 0,0,0,4,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,11,1,0,1,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,3,0,2,3,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,4,0,0,0,4,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 53 0.839623 0 chr20 50104374 50104491 - UBE2V1, chr20 50104366 50104687 h38_mk_AluY5 + 5 SRR1099499,SRR1336548,SRR1435020,SRR1435293,SRR1435775, 65 1,0,0,1,1,2,0,1,1,0,0,0,1,4,2,0,1,1,0,1,1,0,2,0,1,1,1,1,0,1,0,0,0,1,1,1,0,0,1,3,0,2,2,0,1,0,1,0,0,0,0,0,0,0,0,1,1,1,1,5,2,5,0,1,1,1,0,0,0,1,0,0,2,0,1,1,3,0,1,2,0,2,0,2,1,1,0,0,1,0,0,0,2,3,1,3,1,2,2,1,0,0,0,0,2,0,4,0,0,2,0,0,0,1,1,2,1 112 3,1,9,4,5,3,6,3,2,5,6,3,1,3,4,3,12,4,11,7,1,3,3,3,2,0,6,0,4,4,8,2,5,4,3,5,5,4,5,1,0,12,1,8,6,3,2,2,3,2,3,4,2,8,2,7,5,6,2,11,7,3,5,4,4,5,2,1,4,4,5,3,2,6,2,4,5,2,2,3,1,4,5,6,3,8,3,6,6,1,8,0,4,2,4,3,3,9,9,6,1,5,4,0,6,2,2,4,4,14,1,4,2,5,5,2,1 118 0.055404 1 chr20 50875997 50876093 + BCAS4, chr20 50875941 50876258 h38_mk_AluSz - 65 SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1367943,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1399779,SRR1408208,SRR1414897,SRR1416477,SRR1418127,SRR1418837,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1447693,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR595926,SRR600361,SRR602314,SRR604456,SRR607337,SRR613627,SRR657754,SRR658307,SRR661349,SRR662233,SRR662534,SRR814967, 97 1,0,1,2,1,3,2,1,3,1,0,1,2,3,5,1,2,7,0,2,3,2,10,1,1,1,2,3,1,2,4,8,1,2,0,7,0,0,0,12,3,9,1,3,2,1,5,1,1,4,0,4,0,2,3,1,5,1,2,9,4,5,1,4,5,0,2,1,4,0,1,6,9,1,2,3,3,6,0,2,2,8,4,5,6,8,1,0,3,1,2,0,1,1,4,2,4,1,1,7,0,2,3,0,4,5,0,1,4,0,8,3,0,1,2,3,0 108 1,1,1,4,5,5,8,3,2,0,7,3,2,3,6,6,5,6,1,4,2,1,17,2,3,2,3,3,4,2,3,7,1,8,6,6,2,7,1,9,2,9,5,6,7,4,6,1,3,3,0,2,2,8,3,1,2,5,4,4,6,5,6,7,7,1,0,1,1,0,4,3,7,0,0,5,5,4,1,6,5,13,3,3,5,8,2,1,1,1,7,1,4,1,7,1,5,1,1,3,0,9,0,0,7,5,3,2,5,5,13,5,1,6,3,4,2 118 0.120350 1 chr20 50933724 50933827 + ADNP-AS1, chr20 50933683 50933992 h38_mk_AluJ - 58 SRR1077405,SRR1084649,SRR1084842,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1356444,SRR1356619,SRR1357478,SRR1367943,SRR1387264,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1418127,SRR1432123,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1447693,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602704,SRR604456,SRR613627,SRR662233,SRR662534,SRR814967,SRR818210,SRR821602, 111 6,2,4,8,1,7,16,5,1,6,11,6,7,3,3,4,10,9,1,3,8,2,18,5,12,4,7,0,7,4,7,13,0,13,4,2,9,4,0,6,8,8,1,13,4,3,6,6,4,5,5,7,6,5,2,6,9,1,8,5,4,1,2,8,8,2,5,8,10,7,4,6,13,5,2,6,21,3,5,8,5,4,6,8,6,6,6,3,8,9,7,1,6,7,7,11,7,12,7,4,0,10,4,0,11,11,2,1,7,13,2,11,0,8,10,6,1 114 8,9,3,12,4,14,8,3,10,11,7,3,8,5,9,3,16,10,6,1,4,3,18,6,13,5,4,4,3,4,5,4,1,6,2,3,7,2,5,8,8,2,6,5,4,12,9,5,10,10,6,1,1,3,4,4,8,1,5,10,2,4,1,16,10,2,11,6,5,1,5,2,6,7,4,8,11,3,9,5,4,7,10,6,7,0,9,2,9,9,6,0,8,10,6,9,6,6,10,0,1,6,3,16,7,7,2,9,7,3,6,5,2,6,5,5,2 118 0.919575 1 chr20 50941129 50941209 - DPM1, chr20 50941097 50941229 h38_mk_AluJb + 90 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602314,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662534,SRR818033,SRR821602, 112 11,3,6,7,5,7,2,6,4,5,3,3,2,3,5,5,14,3,3,1,5,0,21,2,5,7,0,1,5,6,3,9,10,1,4,2,8,2,4,6,3,12,0,2,1,6,4,4,1,2,1,3,2,6,1,8,6,7,4,6,6,4,1,4,2,4,7,6,5,2,10,2,4,2,6,1,8,3,6,5,12,8,4,4,7,18,15,3,21,6,4,0,6,4,3,1,4,9,4,10,0,4,5,14,22,13,12,2,11,9,6,5,2,2,8,3,7 112 3,3,9,5,5,4,4,9,8,8,2,2,6,3,10,5,33,3,1,2,5,1,23,3,5,5,3,3,7,3,8,5,3,7,2,2,12,0,0,4,4,7,2,3,6,6,11,2,5,7,1,6,3,6,6,5,5,7,3,7,10,2,1,4,7,6,5,2,5,8,12,5,4,5,8,5,8,3,6,3,6,7,8,7,6,22,16,1,28,2,4,0,6,5,8,3,3,10,5,10,1,2,1,0,9,5,5,10,7,17,10,4,5,6,19,0,6 118 0.135777 1 chr20 5111500 5111605 - TMEM230, chr20 5111319 5111648 h38_mk_AluSx4 + 80 SRR1072367,SRR1077405,SRR1084649,SRR1085495,SRR1102055,SRR1315970,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1356444,SRR1356619,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1474553,SRR1474777,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR604262,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033, 109 9,4,6,7,4,3,25,1,5,2,7,6,3,0,17,13,14,9,0,4,8,3,41,8,11,10,15,2,1,13,9,11,5,5,5,7,10,3,1,7,18,4,3,11,8,3,23,9,13,10,7,10,5,6,2,4,8,3,4,7,1,4,1,13,3,12,2,1,2,11,19,1,12,8,3,5,8,7,9,12,10,14,3,1,13,8,4,2,0,2,19,0,3,3,2,6,7,14,4,12,0,11,10,0,8,19,0,6,8,4,21,13,0,19,10,4,1 109 7,5,4,2,6,2,12,1,4,6,2,4,3,1,11,8,5,13,2,2,11,7,26,1,11,7,6,1,6,4,3,0,5,7,6,7,8,8,4,5,13,6,2,14,2,2,10,16,4,4,8,6,6,5,4,3,7,4,4,5,4,8,3,20,4,10,1,2,13,1,21,2,11,8,4,5,11,6,15,4,15,13,1,1,5,12,2,1,0,4,12,0,8,6,6,7,2,5,0,11,0,12,4,0,8,10,0,4,12,4,21,12,0,23,7,9,1 118 0.390685 1 chr20 56388687 56388784 - AURKA, chr20 56388520 56388844 h38_mk_AluSq2 + 7 SRR1085495,SRR1340508,SRR1464373,SRR1485459,SRR1487194,SRR602516,SRR662233, 66 2,0,0,2,1,3,0,0,1,1,1,1,1,0,0,0,1,0,0,0,0,0,4,0,0,1,1,1,2,1,2,1,1,0,0,0,1,1,1,1,1,3,0,0,0,0,2,0,0,2,1,2,1,0,1,2,1,0,0,2,0,0,0,2,1,0,1,1,0,1,1,0,3,0,0,3,2,2,1,2,0,2,1,1,3,2,1,0,2,0,1,0,0,3,0,2,4,1,0,0,0,2,0,0,1,2,0,0,1,0,3,0,0,3,3,2,0 33 0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,4,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,2,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,1,1,0,0,1,0,0,0,2,4,1,0,0,0,0,0,0,0,0,2,3,1,1,0,1,0,1,5,0,1,0,0,0,0,0,4,1,0,0,1,0,0 85 0.803987 0 chr20 56390556 56390665 - AURKA, chr20 56390624 56390693 h38_mk_AluJo + 8 SRR1340508,SRR1435293,SRR1464373,SRR1485459,SRR1487194,SRR602516,SRR607337,SRR661973, 51 0,0,0,3,2,0,2,0,0,0,1,1,0,0,1,0,0,0,0,0,1,0,5,1,1,0,4,1,1,0,2,0,0,0,2,0,0,0,0,3,1,0,0,0,1,1,0,1,0,1,0,1,0,0,0,2,0,0,0,1,2,1,0,2,1,0,1,0,0,0,0,1,2,0,1,2,1,0,0,1,0,0,0,3,4,1,0,0,0,0,1,0,0,0,3,3,1,1,0,3,0,1,5,0,1,0,0,0,0,3,4,3,0,0,1,0,0 37 1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,1,0,0,0,3,0,0,0,0,0,1,0,0,1,0,1,1,0,0,0,0,0,0,0,1,1,1,0,1,1,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,1,0,2,0,1,1,3,0,0,0,2,4,0,0,1,1,0,0,0,0,0,0,2,1,0,0,2,0,0,0,0,0,3,0,0,1,2,2,1,0,2,1,0,1 61 0.536612 0 chr20 5817485 5817605 + C20orf196, chr20 5817464 5817516 h38_mk_AluYk11 - 4 SRR1314163,SRR1439873,SRR1487685,SRR661973, 25 2,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,3,0,0,0,3,1,2,0,0,0,0,0,0,1,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,3,0,3,0,0,0,0,0,0,1,0,0,0,1,0,1,5,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,3,0,2,0,0,1,0,0,0,0,0,0,0,7,0,0,0,0,0,0,6 14 0,0,0,0,0,0,0,1,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,1,0,0,0,1,0 118 0.056350 1 chr20 5972576 5972726 + MCM8, chr20 5972538 5972735 h38_mk_AluSx3 - 1 SRR1487685, 16 0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,3,0,1,0,0,1,1,0 26 2,0,1,0,0,0,0,2,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,1,0,0,2,0,2,2,0,0,0,1,0,1,0,0,0,0,1,1,2,0,0,2,0,0,0,0,15,0,0,0,2,0,0,1,0,1 . . . chr2 101271345 101271744 - RNF149, chr2 101271351 101271610 h38_mk_AluJ + 10 SRR1102055,SRR1314163,SRR1348360,SRR1375571,SRR1439873,SRR1464373,SRR602314,SRR602704,SRR614802,SRR662534, 23 0,0,0,0,0,0,1,1,0,0,0,1,0,0,1,0,0,1,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,0,0,0,0,0 117 29,20,45,34,37,30,35,64,36,29,15,18,33,23,21,23,49,26,39,17,17,31,92,16,30,16,46,25,35,32,40,67,42,68,28,37,8,22,17,22,33,56,27,25,42,61,38,19,21,34,33,41,24,33,34,32,60,63,24,34,38,18,41,29,49,26,22,29,33,44,36,47,41,22,24,15,46,34,5,30,9,48,26,43,44,98,42,10,48,20,41,16,23,34,37,33,27,38,21,66,1,44,24,74,82,95,57,54,34,53,49,24,23,47,61,38,40 . . . chr2 11106696 11106787 - AC062028.1, chr2 11106529 11106864 h38_mk_AluJ + 1 SRR1439873, 36 0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,3,0,0,1,0,0,0,0,0,0,0,1,2,0,0,0,1,1,1,0,0,1,0,0,1,0,1,0,1,1,0,2,1,0,1,0,1,0,1,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,2,1,0,1,3,0,0,0,1,0,0,0,0,0,0,0,2,0,2,1,0,2,1,0,0 8 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 11126392 11126517 - AC062028.1, chr2 11126393 11126704 h38_mk_AluJo + 1 SRR1348159, 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0 . . . chr2 11126392 11126672 - AC062028.1, chr2 11126393 11126704 h38_mk_AluJo + 1 SRR1408208, 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 54 4,0,1,6,0,7,4,6,11,0,0,3,0,0,13,7,0,0,1,0,6,0,27,9,0,0,12,9,10,0,0,13,0,0,0,10,0,4,0,0,0,0,9,8,1,0,4,0,0,0,0,10,2,0,0,0,8,2,4,1,3,0,0,0,0,0,0,0,0,9,1,0,17,0,0,16,12,0,5,7,0,0,0,10,9,0,1,0,0,0,7,0,4,4,0,3,9,0,0,10,0,0,0,0,0,4,0,0,10,14,14,11,0,2,0,5,0 113 0.181621 0 chr2 11126562 11126672 - AC062028.1, chr2 11126393 11126704 h38_mk_AluJo + 50 SRR1072367,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1318163,SRR1326179,SRR1328895,SRR1340508,SRR1341365,SRR1348159,SRR1348360,SRR1354446,SRR1357478,SRR1367943,SRR1375571,SRR1389979,SRR1390601,SRR1408208,SRR1416477,SRR1416754,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1453341,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1485459,SRR1487194,SRR1487685,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR607337,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818210, 104 1,0,3,22,15,7,11,12,9,0,23,6,8,5,14,20,0,7,0,4,0,4,47,8,7,4,10,7,24,7,6,22,7,17,4,16,16,18,1,15,4,11,12,13,15,4,19,0,5,5,4,14,7,3,5,4,15,4,11,12,8,11,13,17,18,6,2,4,6,6,17,11,22,1,3,22,14,7,1,11,19,6,4,14,17,4,9,0,1,4,19,0,11,14,3,11,23,5,0,15,0,11,0,6,38,9,3,6,10,3,27,21,0,19,12,10,0 54 4,0,1,6,0,7,4,6,11,0,0,3,0,0,13,7,0,0,1,0,6,0,27,9,0,0,12,9,10,0,0,13,0,0,0,10,0,4,0,0,0,0,9,8,1,0,4,0,0,0,0,10,2,0,0,0,8,2,4,1,3,0,0,0,0,0,0,0,0,9,1,0,17,0,0,16,12,0,5,7,0,0,0,10,9,0,1,0,0,0,7,0,4,4,0,3,9,0,0,10,0,0,0,0,0,4,0,0,10,14,14,11,0,2,0,5,0 104 0.998988 0 chr2 11126562 11126676 - AC062028.1, chr2 11126393 11126704 h38_mk_AluJo + 2 SRR1085495,SRR1399779, 104 1,0,3,22,15,7,11,12,9,0,23,6,8,5,14,20,0,7,0,4,0,4,47,8,7,4,10,7,24,7,6,22,7,17,4,16,16,18,1,15,4,11,12,13,15,4,19,0,5,5,4,14,7,3,5,4,15,4,11,12,8,11,13,17,18,6,2,4,6,6,17,11,22,1,3,22,14,7,1,11,19,6,4,14,17,4,9,0,1,4,19,0,11,14,3,11,23,5,0,15,0,11,0,6,38,9,3,6,10,3,27,21,0,19,12,10,0 6 0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0 106 0.933517 0 chr2 11128984 11129078 - AC062028.1, chr2 11128970 11129143 h38_mk_AluJo + 3 SRR1453851,SRR657754,SRR661349, 113 1,4,2,33,17,15,15,18,33,2,24,18,7,6,22,15,5,31,2,3,18,1,67,16,20,10,18,10,33,12,19,23,9,14,5,28,40,22,3,34,10,7,12,23,21,9,26,0,3,13,5,16,3,9,11,10,31,11,15,14,18,18,16,21,21,7,3,9,13,10,21,7,48,4,4,37,21,14,4,25,10,26,7,20,28,4,8,2,0,8,18,0,16,20,14,20,21,1,12,10,0,9,4,19,37,34,5,4,30,38,30,34,8,48,15,35,2 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0 114 0.852278 0 chr2 11128984 11129098 - AC062028.1, chr2 11128970 11129143 h38_mk_AluJo + 21 SRR1099499,SRR1317344,SRR1318163,SRR1320115,SRR1333741,SRR1337098,SRR1341763,SRR1360563,SRR1368772,SRR1408208,SRR1416477,SRR1432123,SRR1440986,SRR1464373,SRR1468955,SRR595926,SRR602704,SRR604456,SRR607337,SRR661973,SRR814967, 113 1,4,2,33,17,15,15,18,33,2,24,18,7,6,22,15,5,31,2,3,18,1,67,16,20,10,18,10,33,12,19,23,9,14,5,28,40,22,3,34,10,7,12,23,21,9,26,0,3,13,5,16,3,9,11,10,31,11,15,14,18,18,16,21,21,7,3,9,13,10,21,7,48,4,4,37,21,14,4,25,10,26,7,20,28,4,8,2,0,8,18,0,16,20,14,20,21,1,12,10,0,9,4,19,37,34,5,4,30,38,30,34,8,48,15,35,2 58 0,0,0,1,0,2,0,0,0,0,3,3,3,0,3,1,1,2,0,0,1,0,1,1,4,0,1,1,2,0,1,1,0,4,0,0,1,1,0,2,0,1,0,0,1,1,4,0,0,1,0,3,2,2,0,0,2,0,1,1,2,0,0,1,5,1,0,0,0,1,1,0,1,0,0,2,2,1,0,2,0,0,0,0,1,0,1,0,0,1,2,0,0,1,0,1,3,0,2,2,0,0,0,0,0,0,0,0,0,4,2,0,0,4,0,3,1 114 0.993714 0 chr2 11172751 11172824 + PQLC3, chr2 11172717 11172886 h38_mk_AluJo - 29 SRR1099499,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337412,SRR1341365,SRR1342045,SRR1348159,SRR1356619,SRR1360563,SRR1361567,SRR1399779,SRR1402900,SRR1413562,SRR1414897,SRR1432123,SRR1444622,SRR1468514,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR600361,SRR601500,SRR604456,SRR614802,SRR657635,SRR818033, 97 6,3,0,5,3,5,2,0,1,1,3,0,2,4,5,2,3,3,3,0,0,4,17,5,3,7,4,3,1,0,4,0,1,3,2,3,3,1,0,2,7,1,1,6,4,7,5,1,2,1,1,3,1,0,3,2,2,4,2,3,1,2,0,5,4,2,2,1,0,2,4,1,1,1,2,5,4,2,2,2,3,0,0,6,4,4,2,0,2,1,1,1,1,2,3,5,5,0,2,6,0,4,3,0,4,4,0,0,5,8,5,5,3,5,3,8,0 48 0,0,1,0,1,1,0,0,0,0,0,0,0,0,3,1,2,1,0,0,0,3,1,1,0,1,1,0,0,0,3,0,0,2,1,0,1,0,1,0,0,0,0,0,2,4,1,1,3,1,0,0,2,0,0,0,1,0,0,0,1,1,0,1,1,3,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,2,4,1,0,2,0,0,0,1,1,0,1,0,1,2,0,0,1,1,0,7,0,0,0,0,3,0,0,0,1,3,0,0 116 0.419922 0 chr2 112384523 112384663 - RGPD8, chr2 112384533 112384638 h38_mk_Alu + 1 SRR1487362, 29 2,0,2,2,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,1,3,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,2,0,0,0,0,0,0,0,0,3,3,0,0,0,0,0,0,4,2,0,0,1,1,1,0,0,0,0,0,0,1,0,0,3,0,1,0,0,0,5,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,2,0,0,2,0,2,2,0,0,0,0,0,0,0,0,0 116 8,6,13,22,19,13,21,11,9,12,14,3,7,6,14,12,21,16,4,3,13,7,36,7,8,12,15,12,14,5,11,9,6,12,6,11,11,16,1,15,11,6,17,5,9,8,13,6,5,9,11,14,9,7,0,7,7,4,6,4,6,11,2,12,12,8,5,3,16,8,8,5,30,11,2,14,15,6,4,12,6,16,3,11,15,14,13,3,13,10,9,4,7,18,20,29,21,15,4,29,1,22,13,4,53,19,8,3,18,78,21,16,1,27,28,33,3 . . . chr2 113238090 113238212 + PAX8-AS1, chr2 113238057 113238379 h38_mk_AluSx3 - 18 SRR1099499,SRR1314163,SRR1315970,SRR1320115,SRR1341763,SRR1348159,SRR1356619,SRR1434526,SRR1435293,SRR1440986,SRR1485459,SRR602704,SRR604456,SRR613627,SRR661349,SRR662233,SRR662534,SRR821602, 83 2,2,2,2,4,3,5,6,6,0,1,0,2,2,0,2,0,1,0,0,4,1,11,4,5,8,10,2,1,2,6,2,0,0,1,1,4,0,0,2,4,6,1,0,0,0,2,0,1,1,3,0,1,0,2,1,2,0,6,4,9,1,0,2,13,0,0,0,3,1,0,2,0,2,0,3,5,2,0,2,1,1,2,5,1,1,1,0,2,1,0,2,1,0,1,7,4,2,3,2,0,4,0,4,0,0,2,0,5,3,17,14,3,10,0,4,2 68 2,0,0,0,2,1,1,1,6,0,0,0,1,2,0,0,3,1,2,0,0,2,2,0,2,3,4,0,1,0,3,1,0,0,0,3,1,0,1,5,0,2,1,1,2,3,2,2,2,1,1,1,2,0,2,0,1,0,2,1,3,1,0,1,4,0,3,0,4,1,0,2,0,0,0,2,2,0,0,0,0,0,1,2,0,0,0,1,2,0,0,1,0,0,0,3,2,0,6,1,0,4,0,0,0,1,1,2,2,0,2,1,0,3,0,2,3 . . . chr2 113239089 113239424 + PAX8-AS1, chr2 113239061 113239377 h38_mk_AluSx - 1 SRR604456, 68 2,0,0,0,2,1,1,1,6,0,0,0,1,2,0,0,3,1,2,0,0,2,2,0,2,3,4,0,1,0,3,1,0,0,0,3,1,0,1,5,0,2,1,1,2,3,2,2,2,1,1,1,2,0,2,0,1,0,2,1,3,1,0,1,4,0,3,0,4,1,0,2,0,0,0,2,2,0,0,0,0,0,1,2,0,0,0,1,2,0,0,1,0,0,0,3,2,0,6,1,0,4,0,0,0,1,1,2,2,0,2,1,0,3,0,2,3 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 . . . chr2 113861464 113861561 - AC104653.1, chr2 113861294 113861602 h38_mk_AluJo + 24 SRR1320963,SRR1326179,SRR1342045,SRR1360563,SRR1367943,SRR1408208,SRR1421177,SRR1434526,SRR1435020,SRR1435775,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1485459,SRR1487362,SRR602704,SRR657635,SRR657754,SRR661349,SRR662233, 101 2,0,1,2,2,2,0,3,2,1,3,1,0,6,4,5,3,2,1,0,2,0,6,0,2,5,2,3,5,2,2,2,3,4,1,6,1,2,0,3,3,2,5,3,0,3,4,0,1,1,0,5,1,3,1,4,9,2,2,3,1,4,3,0,4,1,1,1,1,1,8,7,7,0,1,4,9,7,2,2,2,6,1,3,2,2,0,3,4,1,2,1,0,4,3,2,1,1,3,1,0,1,1,0,8,3,1,5,4,14,1,1,3,7,1,1,1 78 1,1,0,5,1,3,0,1,0,1,3,0,0,2,3,2,1,1,2,0,3,1,0,0,2,2,1,0,0,0,0,0,2,3,0,3,2,0,1,0,1,0,2,1,1,4,3,0,0,0,0,2,1,0,2,3,1,1,2,3,4,4,3,0,4,2,0,0,0,1,4,2,7,1,0,2,5,2,5,2,6,6,1,2,2,2,0,4,3,0,1,0,1,0,2,3,2,1,2,0,0,0,0,0,2,4,3,0,3,0,2,1,0,5,1,2,1 108 0.987566 0 chr21 17444083 17444200 + LINC01549, chr21 17444037 17444291 h38_mk_AluJ - 18 SRR1072367,SRR1077405,SRR1316940,SRR1335446,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1408368,SRR1421177,SRR1437538,SRR1471817,SRR1471943,SRR607337,SRR657777,SRR661973,SRR663633,SRR821602, 63 4,3,2,0,0,0,0,2,0,10,0,0,0,0,1,2,2,0,11,0,1,1,9,2,2,2,1,0,0,1,3,0,0,1,2,2,0,1,2,1,0,0,0,2,0,0,0,3,1,1,1,1,0,3,0,2,2,1,0,3,0,0,1,1,0,0,0,0,1,0,2,0,0,2,1,0,1,0,9,2,0,1,0,0,1,0,1,0,1,1,0,1,0,0,0,1,0,1,1,2,0,0,0,0,1,1,2,0,1,3,3,0,6,0,0,2,5 89 11,18,3,6,1,1,0,1,1,15,1,3,4,0,5,3,3,2,9,1,2,0,7,6,1,2,7,0,2,1,4,1,3,2,2,2,0,0,0,5,2,2,2,2,2,3,2,1,2,0,13,1,0,3,0,2,4,6,1,2,3,0,3,2,1,0,0,1,2,4,7,1,3,0,5,0,2,1,10,7,1,3,2,2,3,0,0,0,2,1,2,0,2,1,2,0,0,0,3,2,0,0,0,0,0,1,2,0,3,3,4,1,5,4,4,1,4 . . . chr21 17604145 17604276 - BTG3, chr21 17604152 17604464 h38_mk_AluSq4 + 41 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1320115,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1360128,SRR1367943,SRR1368772,SRR1387264,SRR1399779,SRR1408208,SRR1415234,SRR1416477,SRR1444622,SRR1447693,SRR1457482,SRR1476571,SRR1485459,SRR1487362,SRR1487685,SRR595926,SRR600361,SRR602314,SRR602516,SRR604262,SRR604456,SRR613627,SRR658307,SRR661973,SRR814967,SRR818033, 83 5,0,1,5,3,0,3,4,0,5,0,0,2,0,0,0,11,2,3,8,0,2,5,6,4,1,4,4,1,1,2,0,2,2,0,2,3,1,2,2,2,0,0,2,4,0,2,1,0,2,2,3,0,1,0,0,0,3,3,3,1,1,1,2,0,2,3,1,1,2,2,4,2,3,0,3,1,0,0,1,1,1,1,5,2,5,5,0,13,2,3,0,5,2,2,6,3,6,4,5,0,3,0,0,3,4,0,1,0,2,0,7,0,1,4,0,0 87 6,0,3,7,2,1,5,2,2,0,5,3,3,0,3,1,8,1,1,2,1,2,5,0,5,1,1,0,0,0,0,1,5,2,0,1,3,0,0,0,2,1,0,1,2,1,1,0,2,1,2,1,0,0,1,3,1,1,1,2,0,0,3,0,1,1,2,2,1,0,3,1,1,6,0,1,0,1,0,1,3,3,1,3,1,8,7,0,9,0,1,0,3,1,1,3,2,2,7,1,0,3,0,0,1,2,0,4,1,2,2,1,2,1,11,4,1 118 0.135556 1 chr2 119239363 119239430 + STEAP3, chr2 119239251 119239492 h38_mk_AluSx - 1 SRR1331579, 10 0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,4,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 33 0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,2,0,0,0,1,0,0,1,1,3,1,0,0,0,0,1,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,1,2,1,0,0,0,0,1,0,0,1,1,1,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,3,0,0,0,0,0,1,1,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,1 68 0.435779 0 chr2 119686636 119686874 + TMEM177, chr2 119686629 119686877 h38_mk_AluJ - 2 SRR1356444,SRR1418837, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0 33 0,0,0,1,0,2,0,0,3,0,2,0,0,0,0,0,0,0,0,2,0,3,5,1,0,0,0,0,0,3,4,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,1,3,0,0,3,1,0,0,1,0,2,3,0,0,1,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,6,0,0,0,1,3,0,1,0,0,2,1,0,0,0,0,4,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0 . . . chr2 119686753 119686874 + TMEM177, chr2 119686629 119686877 h38_mk_AluJ - 2 SRR1399779,SRR1471817, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 33 0,0,0,1,0,2,0,0,3,0,2,0,0,0,0,0,0,0,0,2,0,3,5,1,0,0,0,0,0,3,4,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,1,3,0,0,3,1,0,0,1,0,2,3,0,0,1,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,6,0,0,0,1,3,0,1,0,0,2,1,0,0,0,0,4,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0 . . . chr2 121650301 121650381 + NIFK-AS1, chr2 121650272 121650591 h38_mk_AluJb - 10 SRR1072367,SRR1077405,SRR1085495,SRR1340508,SRR1357478,SRR1415234,SRR1421177,SRR1433796,SRR1444678,SRR1457503, 19 2,5,0,0,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,6,0,0,0,0,1,0,3,0,1,0,0,1,0,0,0,0,3,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0 117 46,115,31,19,12,12,14,13,19,39,7,18,19,10,29,20,11,19,12,28,9,91,40,30,21,12,15,6,23,19,11,19,7,18,21,13,28,9,10,16,26,31,13,7,14,20,22,22,21,17,111,19,14,24,14,6,19,59,29,22,38,11,14,31,26,24,16,37,46,16,30,7,14,19,18,14,24,11,50,11,12,31,17,21,17,21,7,15,29,17,16,2,22,14,22,17,10,29,6,23,6,18,12,28,38,17,7,10,21,21,26,26,8,24,36,23,10 . . . chr2 121650301 121650682 + NIFK-AS1, chr2 121650272 121650591 h38_mk_AluJb - 1 SRR1337412, 19 2,5,0,0,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,6,0,0,0,0,1,0,3,0,1,0,0,1,0,0,0,0,3,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0 110 5,4,0,2,1,2,6,1,4,3,5,2,3,5,5,2,4,2,0,0,1,1,20,3,3,2,1,1,1,5,9,2,1,8,7,7,3,4,6,1,2,8,2,1,5,4,1,4,4,3,10,1,5,5,4,1,4,9,0,4,9,4,5,3,2,6,6,4,2,6,3,1,3,3,1,1,5,4,4,2,3,8,4,2,4,8,4,7,5,1,8,0,2,2,4,4,3,6,2,8,1,2,2,0,13,11,2,0,8,6,11,7,3,3,7,2,3 . . . chr2 121650468 121650682 + NIFK-AS1, chr2 121650272 121650591 h38_mk_AluJb - 91 SRR1072367,SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 117 46,115,31,19,12,12,14,13,19,39,7,18,19,10,29,20,11,19,12,28,9,91,40,30,21,12,15,6,23,19,11,19,7,18,21,13,28,9,10,16,26,31,13,7,14,20,22,22,21,17,111,19,14,24,14,6,19,59,29,22,38,11,14,31,26,24,16,37,46,16,30,7,14,19,18,14,24,11,50,11,12,31,17,21,17,21,7,15,29,17,16,2,22,14,22,17,10,29,6,23,6,18,12,28,38,17,7,10,21,21,26,26,8,24,36,23,10 110 5,4,0,2,1,2,6,1,4,3,5,2,3,5,5,2,4,2,0,0,1,1,20,3,3,2,1,1,1,5,9,2,1,8,7,7,3,4,6,1,2,8,2,1,5,4,1,4,4,3,10,1,5,5,4,1,4,9,0,4,9,4,5,3,2,6,6,4,2,6,3,1,3,3,1,1,5,4,4,2,3,8,4,2,4,8,4,7,5,1,8,0,2,2,4,4,3,6,2,8,1,2,2,0,13,11,2,0,8,6,11,7,3,3,7,2,3 . . . chr21 26215702 26215829 + AP000229.1, chr21 26215666 26215850 h38_mk_AluJo - 1 SRR662233, 96 1,0,0,6,2,0,1,1,1,1,1,3,1,2,3,0,1,4,2,0,2,4,5,1,1,0,1,2,6,5,0,3,4,3,2,3,1,2,1,1,5,2,3,6,3,0,2,5,5,11,2,2,0,2,2,2,4,0,3,3,2,2,2,2,1,2,0,0,1,2,4,2,5,1,1,5,3,1,0,1,4,9,1,4,2,1,1,0,3,0,3,0,4,3,1,11,3,3,5,0,0,4,0,0,2,8,1,2,6,3,5,2,0,7,2,2,1 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,4,0,0,0,0,0,0 . . . chr2 127657952 127658221 - LIMS2, chr2 127658108 127658423 h38_mk_AluJb + 4 SRR1439873,SRR607337,SRR657754,SRR661973, 51 3,2,5,5,0,4,0,3,0,0,1,0,1,0,1,0,0,0,0,0,1,0,2,0,2,3,0,2,1,0,2,0,1,0,0,0,0,4,0,0,0,4,0,0,1,0,0,0,0,0,2,0,0,1,1,0,2,0,2,0,0,0,4,2,6,1,1,0,4,2,4,0,0,0,1,0,2,3,0,3,2,0,1,7,0,0,2,0,0,1,0,0,4,0,0,0,0,0,0,5,0,2,0,0,4,2,0,4,0,5,2,0,0,1,0,0,0 17 0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,1,0,2,0,0,1,0,0,2,0,0,2,1,0,1,0,0,0,0,0 111 0.221239 0 chr2 127657962 127658221 - LIMS2, chr2 127658108 127658423 h38_mk_AluJb + 7 SRR1326179,SRR1414897,SRR1439873,SRR604262,SRR614802,SRR657754,SRR662534, 55 5,6,1,0,2,0,0,1,0,2,1,4,0,0,1,0,1,0,4,1,2,0,1,0,0,4,0,0,0,0,3,0,0,0,0,0,0,2,2,0,4,9,1,0,0,2,0,0,8,1,0,3,0,2,0,0,1,0,3,1,0,0,0,3,2,0,0,0,2,3,2,0,0,3,0,0,0,0,0,1,0,0,0,3,2,0,0,0,3,0,0,2,4,1,3,0,2,3,0,0,0,0,1,2,0,2,0,6,0,2,5,4,0,2,0,4,12 17 0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,1,0,2,0,0,1,0,0,2,0,0,2,1,0,1,0,0,0,0,0 110 0.239416 0 chr2 128290870 128290954 - HS6ST1, chr2 128290680 128291004 h38_mk_AluSz + 9 SRR1102055,SRR1317344,SRR1360563,SRR1408208,SRR1457482,SRR1485459,SRR662233,SRR662534,SRR818210, 50 0,0,0,0,2,1,3,0,0,0,7,4,4,0,0,0,2,2,0,0,1,0,5,0,0,0,0,0,0,5,0,2,0,2,0,0,5,0,0,1,2,1,2,1,0,0,2,1,0,0,0,3,0,1,3,1,5,0,0,1,0,0,0,4,2,0,0,3,0,0,1,0,4,2,1,1,0,0,0,2,1,1,0,7,2,0,0,0,0,3,4,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,1,0,3,6,0,0,6,6,3 33 0,0,3,4,1,0,4,0,0,0,4,0,0,0,3,1,0,0,0,0,1,0,2,0,0,2,0,0,0,0,0,2,0,3,0,1,1,0,0,0,1,0,2,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,1,0,0,1,0,2,0,0,0,0,0,1,0,0,0,3,0,0,0,0,1,0,1,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,3,0,0,0,2,0 118 0.015491 1 chr21 29091501 29091576 + MAP3K7CL, chr21 29091454 29091793 h38_mk_AluJ - 31 SRR1072367,SRR1077405,SRR1084842,SRR1316940,SRR1331579,SRR1333741,SRR1335446,SRR1340508,SRR1341763,SRR1342045,SRR1354446,SRR1368772,SRR1408368,SRR1418837,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1455925,SRR1457503,SRR1474777,SRR1487685,SRR601500,SRR607337,SRR657754,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210,SRR821602, 83 1,11,0,1,0,1,2,0,1,7,1,1,0,1,1,1,2,3,4,1,1,0,4,1,5,6,0,2,3,2,0,0,0,0,0,0,1,1,0,2,0,2,3,2,0,1,1,3,3,0,1,1,0,2,4,0,5,0,1,2,2,2,2,1,1,1,1,1,0,2,1,2,2,2,2,0,2,2,0,0,0,3,0,1,1,0,1,0,1,1,0,0,2,2,0,1,2,1,4,4,0,1,1,0,1,7,0,0,2,13,4,1,1,2,1,1,11 78 5,3,1,4,1,3,0,3,1,5,0,1,0,0,1,1,3,4,6,0,0,0,4,0,5,4,1,0,2,0,0,0,4,1,0,1,2,1,1,0,0,0,0,4,0,2,0,3,3,1,1,1,0,1,2,0,2,0,2,2,2,3,0,1,0,0,2,1,2,0,1,0,2,0,2,1,2,1,0,2,1,2,2,1,3,1,1,1,1,1,3,4,2,2,0,3,0,0,1,1,0,2,0,0,0,9,5,0,0,4,7,2,0,2,2,1,6 . . . chr21 29091668 29091761 + MAP3K7CL, chr21 29091454 29091793 h38_mk_AluJ - 24 SRR1072367,SRR1084842,SRR1099499,SRR1314163,SRR1316940,SRR1335446,SRR1340508,SRR1341763,SRR1354446,SRR1390601,SRR1418837,SRR1434526,SRR1435775,SRR1444622,SRR1457503,SRR599510,SRR657754,SRR657777,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210,SRR821602, 78 5,3,1,4,1,3,0,3,1,5,0,1,0,0,1,1,3,4,6,0,0,0,4,0,5,4,1,0,2,0,0,0,4,1,0,1,2,1,1,0,0,0,0,4,0,2,0,3,3,1,1,1,0,1,2,0,2,0,2,2,2,3,0,1,0,0,2,1,2,0,1,0,2,0,2,1,2,1,0,2,1,2,2,1,3,1,1,1,1,1,3,4,2,2,0,3,0,0,1,1,0,2,0,0,0,9,5,0,0,4,7,2,0,2,2,1,6 79 2,1,1,3,1,3,0,4,0,3,1,1,0,1,2,1,0,0,6,1,4,1,3,0,5,1,2,2,5,0,0,3,2,1,1,0,0,2,1,0,4,1,0,2,4,0,0,1,0,2,0,0,0,0,3,1,2,0,2,0,1,1,2,0,0,0,2,1,5,1,1,0,1,2,3,1,0,0,1,1,1,2,1,2,1,2,0,0,1,1,1,5,6,0,0,2,0,1,0,3,0,0,2,0,6,2,2,1,1,7,2,0,0,2,5,4,7 . . . chr2 130367082 130367171 + PTPN18, chr2 130367069 130367167 h38_mk_AluJ - 1 SRR1415234, 9 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,3,0,0,0,1,0,0,0,0,0,0,0,0,0 11 0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0 111 0.049635 0 chr2 130367088 130367171 + PTPN18, chr2 130367069 130367167 h38_mk_AluJ - 4 SRR1318163,SRR1340508,SRR1416477,SRR1453851, 33 0,0,1,3,0,0,3,0,0,0,0,1,0,0,1,1,0,1,0,2,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,2,1,0,1,1,0,1,0,0,1,0,1,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,3,3,0,0,5,0,1,0 11 0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,3,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0 16 0.979167 0 chr21 33448782 33448879 - TMEM50B, chr21 33448734 33448934 h38_mk_AluJo + 2 SRR1432123,SRR663633, 117 65,23,53,54,29,48,29,50,36,80,27,31,19,32,53,32,65,37,37,40,19,99,48,26,28,31,40,46,9,50,40,86,12,57,26,15,14,17,35,72,32,69,21,18,37,56,38,29,55,44,44,25,40,49,40,28,98,77,37,49,20,21,48,37,44,41,31,21,43,58,19,58,20,35,13,19,49,54,12,37,19,58,59,64,37,42,73,33,74,34,44,9,48,41,36,41,36,104,37,39,5,72,19,132,59,88,42,48,32,66,62,47,74,55,112,35,40 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,7,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0 . . . chr21 33448782 33448903 - TMEM50B, chr21 33448734 33448934 h38_mk_AluJo + 6 SRR1328895,SRR1337412,SRR1415234,SRR1432123,SRR1468514,SRR1498550, 117 65,23,53,54,29,48,29,50,36,80,27,31,19,32,53,32,65,37,37,40,19,99,48,26,28,31,40,46,9,50,40,86,12,57,26,15,14,17,35,72,32,69,21,18,37,56,38,29,55,44,44,25,40,49,40,28,98,77,37,49,20,21,48,37,44,41,31,21,43,58,19,58,20,35,13,19,49,54,12,37,19,58,59,64,37,42,73,33,74,34,44,9,48,41,36,41,36,104,37,39,5,72,19,132,59,88,42,48,32,66,62,47,74,55,112,35,40 20 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,1,9,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,1,1,0,0,2,0,0,0,0,2,4,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 . . . chr21 36133687 36133761 - CBR3-AS1, chr21 36133611 36133802 h38_mk_AluJ + 1 SRR814967, 71 1,0,1,3,2,3,0,0,1,3,0,0,0,1,1,0,1,1,0,0,4,0,1,0,1,3,4,0,4,0,5,2,1,2,0,2,1,1,0,0,1,1,1,1,1,2,1,1,1,0,0,4,2,0,0,2,2,0,2,2,1,0,1,1,2,0,1,2,1,0,2,0,1,1,3,2,2,1,0,0,1,0,0,1,4,1,1,0,0,2,1,0,0,0,1,0,3,0,1,0,0,0,1,0,1,1,0,2,0,6,0,1,0,2,0,1,0 21 0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,1,1,0,0,0,0,0,3,0,3,0,1,0 98 0.516930 0 chr21 37410570 37410670 + DYRK1A, chr21 37410519 37410701 h38_mk_AluJ - 1 SRR1457503, 12 0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 9 0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 0.021296 0 chr21 44336824 44336920 - AP001062.3,C21orf2, chr21 44336793 44337120 h38_mk_AluSx1 + 12 SRR1328895,SRR1433796,SRR1444622,SRR1317344,SRR1335446,SRR1361567,SRR1375571,SRR1387809,SRR1389979,SRR1485459,SRR601500,SRR602314, 106 1,1,11,8,0,2,0,3,1,4,7,5,1,6,6,6,1,8,5,0,2,4,9,3,0,9,7,6,6,5,7,1,1,5,6,3,1,5,7,4,9,14,8,2,6,9,7,10,5,2,2,5,3,2,4,2,4,6,0,3,4,0,2,8,9,5,3,1,2,1,6,2,4,8,4,3,1,1,0,2,6,0,10,10,4,7,4,1,0,7,11,4,4,4,4,1,3,10,9,4,0,4,1,7,24,2,4,2,9,7,11,10,1,10,0,14,3 58 1,0,0,0,0,1,1,0,1,2,2,3,0,0,0,2,0,0,3,0,0,0,1,0,2,0,0,0,1,0,1,2,0,2,4,0,1,2,1,0,1,5,2,0,1,1,0,1,0,0,1,1,0,0,1,1,2,3,0,0,2,0,0,1,1,1,1,0,1,1,0,1,0,0,1,0,2,1,0,0,0,0,1,2,0,0,1,0,1,1,0,0,1,2,1,2,0,0,0,0,0,0,0,0,2,1,1,0,1,0,0,1,0,1,0,1,0 118 0.067714 1 chr21 45184474 45184593 + ADARB1, chr21 45184439 45184760 h38_mk_AluJb - 111 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 114 2,2,8,34,21,14,14,7,15,5,25,18,5,10,22,19,11,19,3,3,29,0,68,12,20,19,25,9,19,5,15,8,5,22,5,37,24,22,2,14,13,12,19,18,13,13,23,6,7,7,3,19,4,2,14,11,19,3,16,16,15,12,7,38,18,9,0,4,10,8,9,6,49,3,2,22,23,15,3,34,19,28,3,17,18,8,4,1,10,2,29,5,12,19,11,29,33,4,5,12,1,5,9,6,46,16,13,6,45,36,21,31,0,55,31,47,4 114 14,3,3,59,25,15,38,10,32,6,39,20,7,15,36,14,19,36,5,1,55,6,103,24,26,26,39,14,36,8,24,37,9,30,8,40,23,35,4,17,25,20,29,34,23,21,26,7,8,19,3,21,11,14,12,23,33,3,22,25,16,13,10,55,33,14,1,9,14,15,27,13,81,17,5,39,36,24,2,45,25,36,4,27,34,14,6,0,13,6,43,4,23,33,18,45,55,8,11,18,1,14,20,0,41,75,16,13,59,44,50,46,0,60,37,97,12 118 0.800095 1 chr2 157826528 157826646 - ACVR1, chr2 157826370 157826690 h38_mk_AluJb + 1 SRR1072367, 54 1,0,1,1,1,0,1,0,0,0,4,0,0,0,0,1,1,0,0,1,0,0,5,2,1,1,3,0,0,0,2,0,1,1,1,1,1,0,0,0,1,0,0,1,0,2,0,0,0,0,1,1,2,2,0,1,0,0,0,0,0,0,0,1,2,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,3,1,1,2,1,1,0,1,1,0,0,0,1,0,0,1,3,2,3,0,0,3,0,0,0,1,0,0,1,0,1,0,0,3,1,1,4 6 2,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 164946281 164946561 - SLC38A11, chr2 164946277 164946595 h38_mk_AluSc + 1 SRR1342045, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 . . . chr2 171414603 171414726 - METTL8, chr2 171414435 171414753 h38_mk_AluJb + 3 SRR1317344,SRR1328895,SRR814967, 31 0,0,1,1,0,0,0,0,0,0,3,0,0,1,1,1,0,0,0,0,0,1,0,0,2,2,2,0,0,0,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,1,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,2,0,1,1,0,0,0,0,0,1,0,0,0,0,0,1,0,1,1,1,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0 39 0,1,1,1,0,0,1,0,0,0,2,1,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,1,2,0,0,0,0,0,1,1,0,0,0,0,2,0,0,0,3,0,0,0,0,0,0,0,2,1,1,0,0,1,0,0,0,1,1,0,0,0,1,1,0,1,1,0,0,0,0,0,2,0,1,0,1,1,1,1,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,0 . . . chr2 174677028 174677124 - WIPF1, chr2 174676871 174677173 h38_mk_AluJo + 1 SRR1360128, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 25 1,0,0,1,0,0,2,0,0,1,0,0,1,1,1,1,3,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,1 . . . chr2 17530275 17530577 - RAD51AP2, chr2 17530401 17530624 h38_mk_AluJb + 1 SRR1454803, 26 0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,8,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,3,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,3,1,0,0,0,0,0,0,1,0,0,0,0,0,4,0,0,0,0,1,1,1,0,0,1,0,1,0,0,2,2,0,6,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 8 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0 . . . chr2 176270216 176270419 + MTX2, chr2 176270160 176270342 h38_mk_AluSq2 - 104 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 113 3,6,4,14,15,9,13,6,13,9,21,4,4,2,13,9,5,10,3,3,11,2,42,7,5,3,9,5,13,7,3,7,3,12,1,9,9,3,4,11,12,9,11,12,8,8,9,6,2,7,4,10,2,3,7,10,8,2,5,11,5,13,6,6,6,0,1,7,6,11,7,10,14,2,4,7,16,8,9,6,14,6,2,19,11,9,2,1,5,1,12,0,2,9,10,18,10,2,7,5,0,14,8,5,2,8,5,0,11,11,22,13,1,14,19,14,1 117 11,8,8,18,24,20,33,5,19,17,20,13,11,4,20,20,9,23,5,5,23,6,77,6,16,18,23,13,32,14,10,16,11,30,7,22,21,10,4,28,16,19,15,17,17,17,34,17,8,10,14,18,3,2,16,16,19,3,12,10,16,21,12,24,16,6,5,5,8,16,25,7,22,11,9,14,18,14,18,21,22,31,5,25,21,21,8,1,5,4,22,2,18,13,27,19,19,8,9,18,3,12,18,4,32,36,15,15,32,39,48,30,10,37,35,37,5 118 0.265582 1 chr2 177311233 177311328 - AC019080.1,NFE2L2, chr2 177311209 177311530 h38_mk_AluSx + 44 SRR1077405,SRR1084842,SRR1314163,SRR1317344,SRR1318163,SRR1326179,SRR1341365,SRR1342045,SRR1361567,SRR1367943,SRR1387809,SRR1415234,SRR1418837,SRR1421177,SRR1435293,SRR1437538,SRR1447693,SRR1457503,SRR1474777,SRR604456,SRR818210,SRR821602,SRR1099499,SRR1315970,SRR1316940,SRR1320115,SRR1337412,SRR1340508,SRR1354446,SRR1356444,SRR1360563,SRR1375571,SRR1399779,SRR1432123,SRR1439873,SRR1453341,SRR1453851,SRR1455925,SRR1471943,SRR1488651,SRR601500,SRR658307,SRR661973,SRR662233, 110 2,3,1,11,4,9,0,2,2,9,5,5,6,4,8,2,6,1,2,0,3,5,13,3,5,3,12,5,2,3,6,5,4,5,5,9,0,4,1,7,8,4,6,10,10,6,5,7,5,7,8,3,2,4,3,4,9,3,2,1,3,0,4,5,9,2,0,2,7,8,13,0,11,3,4,9,10,5,3,7,1,8,5,5,4,4,7,5,7,2,8,2,5,5,10,2,6,0,2,5,1,1,2,4,8,3,8,11,12,23,13,6,3,6,9,7,20 67 0,1,0,1,0,3,0,1,1,4,2,1,1,0,2,0,0,0,0,0,0,3,8,2,1,2,1,1,2,2,0,0,1,1,1,4,1,3,0,0,0,1,0,1,2,0,0,0,0,1,3,0,0,0,1,2,2,1,0,0,2,3,4,2,0,0,0,0,3,1,1,1,2,1,1,2,1,0,1,1,0,1,0,1,0,0,0,2,0,0,0,3,1,1,1,0,0,0,1,1,0,0,2,0,1,0,1,1,0,2,1,0,0,1,0,2,1 . . . chr2 183130995 183131117 + NUP35, chr2 183130964 183131255 h38_mk_AluJo - 2 SRR1331579,SRR818033, 27 0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,1,2,1,0,0,0,0,0,0,0,0,0,0,1,0,2,1,0,0,0,1,1,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,3,0,0,1,0,1,0,0,0,0,3,0,0,0,0,1,1,0,0,0,1,1,0 45 0,0,0,1,0,1,2,0,0,1,0,1,1,1,2,0,4,1,0,0,1,0,0,1,1,1,1,1,0,0,1,0,0,3,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,1,1,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,1,0,0,0,2,0,1,1,0,0,1,0,1,0,0,0,0,1,0,1,1,2,0,0,1,0,0,0,3,4,0,0,0,0,1,2,3 118 0.061343 1 chr21 8405960 8406056 + FP236383.1, chr21 8405936 8406063 h38_mk_AluJb - 2 SRR1333741,SRR1432123, 106 11,3,8,0,3,1,3,22,2,19,2,9,5,9,7,0,19,5,5,5,7,12,16,3,6,6,8,6,4,7,7,8,3,11,6,5,9,6,7,5,4,7,6,5,0,4,1,6,7,0,11,8,4,7,6,6,13,13,1,11,15,2,3,12,11,2,5,6,4,5,7,20,6,7,2,9,7,6,13,0,0,4,11,11,6,14,0,13,21,9,6,0,1,2,10,4,3,16,14,11,1,9,3,0,2,2,1,13,3,3,1,0,2,5,12,0,3 56 0,0,0,1,0,0,1,2,1,7,0,0,0,0,0,0,2,3,4,0,0,0,6,0,2,1,1,2,0,3,0,2,0,1,1,0,2,0,0,1,1,4,2,0,0,1,2,3,0,0,1,1,0,1,0,2,7,0,1,5,0,0,0,3,1,0,4,0,0,0,0,2,0,2,0,0,1,2,4,0,0,0,0,1,0,6,0,3,2,3,1,0,0,0,1,1,4,2,3,2,0,0,0,0,0,0,0,0,0,1,1,3,0,4,0,0,0 . . . chr21 8406184 8406257 + FP236383.1, chr21 8406145 8406405 h38_mk_AluSp - 1 SRR1432123, 55 0,0,0,1,0,0,1,2,1,7,0,0,0,0,0,0,2,2,4,0,0,0,6,0,2,1,1,2,0,3,0,2,0,0,1,0,2,0,0,1,1,4,2,0,0,1,2,3,0,0,1,1,0,1,0,2,7,0,1,5,0,0,0,3,1,0,4,0,0,0,0,2,0,2,0,0,1,2,4,0,0,0,0,1,0,6,0,3,2,3,1,0,0,0,1,1,4,2,3,2,0,0,0,0,0,0,0,0,0,1,1,3,0,4,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 190415292 190415413 + MFSD6, chr2 190415258 190415579 h38_mk_AluJ4 - 62 SRR1072367,SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1316940,SRR1317344,SRR1318163,SRR1328895,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1367943,SRR1368772,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR601500,SRR602516,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210, 93 4,2,0,10,2,3,9,0,0,4,3,1,0,1,2,5,0,4,0,0,7,1,20,2,2,6,3,1,6,1,4,1,1,2,0,2,2,1,0,1,2,0,3,2,2,5,2,0,6,4,3,3,0,0,2,1,3,1,3,3,0,1,1,6,1,1,1,3,1,3,1,0,9,5,1,7,7,2,0,6,1,1,0,4,6,5,1,0,3,0,5,0,1,4,1,7,2,1,1,0,1,1,4,0,3,2,0,1,10,14,11,3,0,9,3,13,1 104 10,5,3,19,14,15,13,2,3,4,9,8,0,4,26,12,2,7,4,1,16,6,32,9,9,11,7,0,19,1,7,5,1,1,2,9,5,8,0,5,12,3,10,18,5,6,15,0,3,1,11,7,0,2,11,4,4,3,13,7,0,6,2,12,4,3,1,10,5,6,3,2,40,8,2,27,7,2,0,21,6,6,0,8,12,3,3,0,0,0,16,0,7,15,8,17,26,1,4,7,1,9,6,1,7,15,2,7,24,29,29,14,0,41,15,23,6 112 0.642977 0 chr2 199667338 199667469 - FTCDNL1, chr2 199667345 199667481 h38_mk_AluJb + 28 SRR1084842,SRR1317344,SRR1320963,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1367943,SRR1386708,SRR1387264,SRR1387809,SRR1408208,SRR1415234,SRR1432123,SRR1435293,SRR1453851,SRR1464373,SRR1468514,SRR595926,SRR601500,SRR604262,SRR604456,SRR657635,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210, 116 12,3,10,19,7,12,8,1,11,12,6,7,11,14,23,19,23,27,5,2,19,4,33,6,12,22,11,7,12,4,14,4,7,11,11,27,14,10,6,19,22,8,15,12,8,22,14,14,6,7,3,9,6,9,8,11,28,4,18,21,12,11,6,20,13,2,10,12,11,10,14,11,13,11,10,13,42,11,10,9,8,14,7,12,22,10,9,2,4,11,18,1,11,19,21,11,31,14,14,28,1,7,5,0,27,43,10,15,16,41,33,7,5,34,18,54,1 31 0,0,0,2,0,0,0,0,0,2,2,0,0,3,0,0,0,0,0,0,0,0,3,0,3,4,3,0,0,0,0,0,0,0,0,3,0,0,0,4,5,3,0,0,0,0,1,0,0,0,2,0,0,0,0,0,3,0,0,6,2,0,0,0,0,0,0,0,0,0,3,0,0,0,0,6,6,0,0,0,0,0,0,0,0,0,0,0,3,0,6,0,0,5,0,0,0,2,1,0,0,0,0,0,2,0,0,0,0,7,11,0,0,11,8,5,0 117 0.998932 0 chr2 200885262 200885367 - CLK1,PPIL3, chr2 200885079 200885410 h38_mk_AluSx + 104 SRR602704,SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR604262,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR814967,SRR818033,SRR821602, 114 13,3,7,7,8,4,4,6,9,4,8,10,8,3,9,3,11,2,3,4,3,8,18,3,4,6,13,12,7,5,11,4,2,8,2,3,10,4,0,9,12,12,4,16,2,8,5,7,6,6,13,9,3,8,5,5,5,3,4,7,12,7,3,4,11,4,4,4,1,13,12,18,4,8,6,5,10,7,4,9,9,0,5,15,9,8,3,1,6,6,5,2,9,6,4,18,5,10,2,19,0,14,1,5,9,5,1,5,14,12,1,7,11,7,21,3,6 116 11,4,4,20,11,7,14,5,7,6,12,7,6,9,22,11,15,14,2,2,10,8,26,7,15,9,16,14,12,9,15,10,5,10,7,6,15,9,4,14,15,9,9,8,4,8,9,4,3,7,11,6,2,11,10,11,12,7,13,17,9,7,2,6,7,9,8,8,10,8,9,13,5,2,9,11,17,5,5,11,22,4,8,30,10,19,9,7,19,7,15,2,7,10,8,28,13,12,4,17,0,17,8,18,23,22,4,10,14,22,10,9,3,12,31,11,8 117 0.887472 0 chr2 203351555 203351678 + ABI2, chr2 203351523 203351845 h38_mk_AluJo - 1 SRR1318163, 16 0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,3,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0 21 0,0,0,1,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,2,0,0,0,1,2,1,0,1,0,0,0,0,0,1,0,3,0,0,0,0,0,2,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,2,0,0,0,0,0,1,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 118 0.008309 1 chr2 210016204 210016257 + RPE, chr2 210016173 210016267 h38_mk_AluJb - 81 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435293,SRR1440986,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR600361,SRR601500,SRR602704,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 101 2,1,8,13,0,6,9,0,2,3,3,5,1,1,5,7,6,3,1,1,7,1,11,1,3,9,6,0,2,6,1,5,8,2,3,6,5,7,1,6,5,9,10,4,5,4,4,0,7,2,2,6,0,6,3,7,3,1,6,0,1,5,0,1,2,0,0,1,12,3,7,0,11,1,2,2,15,5,1,2,3,5,2,6,9,12,0,0,3,1,8,4,3,11,6,1,7,0,0,1,0,5,6,0,23,18,3,1,18,28,25,8,1,16,3,18,4 100 1,4,8,22,0,15,5,0,2,2,4,8,1,4,12,10,8,5,2,2,10,0,9,6,9,6,11,1,6,4,1,2,9,2,3,2,3,7,0,12,7,12,6,6,4,10,7,0,2,3,1,7,2,5,3,8,7,2,6,1,2,0,0,2,2,0,0,3,9,5,9,0,26,2,1,3,21,5,0,2,7,2,3,5,4,21,0,1,2,1,11,0,5,9,1,3,13,3,6,0,0,9,5,0,16,16,7,11,17,30,47,10,0,14,4,16,5 118 0.231371 1 chr2 210155194 210155404 - KANSL1L, chr2 210155120 210155435 h38_mk_AluSx1 + 1 SRR814967, 55 1,0,0,0,1,1,1,0,0,4,1,0,0,2,1,1,1,0,0,3,1,0,3,0,0,1,0,0,0,2,4,1,0,1,0,0,0,0,1,0,1,1,1,1,0,0,0,1,0,1,3,0,0,2,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,1,0,2,0,0,0,1,0,1,1,2,2,0,0,4,0,0,0,0,2,1,3,2,3,0,2,1,2,0,0,0,0,1,0,1,0,1,0,0,1,1,2,4 3 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 . . . chr22 17140364 17140577 - HDHD5, chr22 17140433 17140614 h38_mk_AluJo + 2 SRR1102055,SRR1340508, 42 0,0,0,2,0,0,3,0,2,0,0,0,1,2,0,2,0,0,0,0,3,0,2,1,3,0,0,1,4,0,1,2,0,3,0,0,2,0,0,2,0,4,0,3,0,1,0,0,0,0,0,0,1,0,0,0,4,0,0,0,0,0,0,2,3,0,0,0,1,1,1,0,2,1,0,3,1,0,0,0,0,0,0,1,3,1,0,0,0,1,0,0,2,2,0,0,3,0,0,0,0,0,0,0,0,0,0,0,2,4,0,1,0,0,3,0,0 3 0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.013924 1 chr22 17662899 17663013 + BCL2L13, chr22 17662857 17663165 h38_mk_AluJ - 51 SRR1072367,SRR1084842,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1356444,SRR1360128,SRR1360563,SRR1381673,SRR1387264,SRR1389979,SRR1390601,SRR1408208,SRR1408368,SRR1415234,SRR1416754,SRR1432123,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1444678,SRR1457482,SRR1457503,SRR1468514,SRR1471943,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602314,SRR602704,SRR604262,SRR604456,SRR613627,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818210, 95 2,2,5,8,2,1,2,3,0,6,5,3,3,1,4,6,6,4,1,1,2,2,10,1,1,2,0,0,0,3,0,2,2,3,0,2,4,4,3,3,12,0,3,4,2,2,2,5,0,2,5,0,1,3,0,2,6,1,1,2,4,3,0,4,5,0,1,4,3,3,3,0,4,2,3,5,5,0,1,6,1,0,1,4,3,3,3,1,3,2,5,0,5,0,4,2,3,3,2,3,0,4,2,0,7,5,0,0,1,7,4,7,0,2,1,7,2 90 2,3,2,10,2,0,1,0,0,4,4,2,0,4,3,6,2,2,1,1,5,0,6,1,4,0,1,1,2,3,2,0,5,1,5,0,1,0,8,1,2,4,3,2,0,0,1,8,1,0,4,0,2,0,1,3,6,2,1,3,7,1,0,2,4,2,1,4,2,0,0,0,1,2,2,1,2,0,1,5,2,1,2,2,0,4,2,2,2,3,3,2,2,5,5,0,3,3,4,2,0,5,0,0,1,4,2,2,4,3,5,5,0,2,0,8,0 117 0.197751 0 chr22 17662917 17663013 + BCL2L13, chr22 17662857 17663165 h38_mk_AluJ - 1 SRR1433796, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 90 2,3,2,10,2,0,1,0,0,4,4,2,0,4,3,6,2,2,1,1,5,0,6,1,4,0,1,1,2,3,2,0,5,1,5,0,1,0,8,1,2,4,3,2,0,0,1,8,1,0,4,0,2,0,1,3,6,2,1,3,7,1,0,2,4,2,1,4,2,0,0,0,1,2,2,1,2,0,1,5,2,1,2,2,0,4,2,2,2,3,3,2,2,5,5,0,3,3,4,2,0,5,0,0,1,4,2,2,4,3,5,5,0,2,0,8,0 117 0.107632 0 chr2 218385412 218385485 + SLC11A1, chr2 218385370 218385700 h38_mk_AluSx1 - 39 SRR1072367,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1326179,SRR1331579,SRR1335446,SRR1337412,SRR1348159,SRR1360128,SRR1387264,SRR1402900,SRR1408368,SRR1413562,SRR1421177,SRR1432123,SRR1444622,SRR1457482,SRR1457503,SRR1468514,SRR1476571,SRR1487362,SRR1487685,SRR599510,SRR600361,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR662233,SRR662534,SRR663633,SRR818033,SRR821602, 57 10,0,0,0,0,5,12,1,0,3,0,0,0,0,4,0,11,1,12,0,1,3,0,0,0,0,1,1,0,1,3,0,6,0,1,0,0,0,2,0,3,0,1,0,1,6,1,4,2,2,0,1,0,0,1,10,2,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,2,2,1,11,0,0,0,0,0,2,3,0,24,8,0,0,0,0,3,1,0,1,0,0,0,4,2,0,1,3,0,14,1,1,1,0,0,1,10,1,1,5,1,10 74 22,1,2,3,0,2,13,7,0,2,0,0,0,0,3,0,19,1,16,2,0,2,0,0,0,0,3,1,0,0,0,1,14,0,0,0,0,0,0,1,5,1,0,2,1,3,0,1,3,0,1,1,1,0,1,8,4,0,0,0,0,1,4,1,1,1,2,0,0,1,0,1,0,1,1,1,8,1,0,1,0,0,1,0,0,51,15,1,3,1,0,7,2,0,1,0,1,2,4,2,1,3,2,2,9,4,3,8,0,5,1,7,6,0,2,1,17 107 0.368423 0 chr22 18989580 18989964 + DGCR5, chr22 18989538 18989865 h38_mk_AluY - 7 SRR1342045,SRR1367943,SRR1435020,SRR1455925,SRR1468514,SRR814967,SRR818033, 18 0,0,0,0,0,4,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,10,0,2,0,0,0,0,0,0,0,5,0,0,0,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,1,0,0,0,2,0,0,0,0,0,0,14,0,0,0,8,2,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16,0,0,0,5,12,0,0 66 0,0,0,7,0,2,0,0,5,2,3,2,1,1,0,0,2,5,0,0,3,0,4,3,0,4,5,0,4,0,1,0,0,2,6,1,3,4,0,0,1,2,1,2,0,4,2,0,0,2,0,0,3,0,1,0,3,0,0,2,12,2,6,3,4,0,1,0,2,2,3,0,3,2,0,5,1,0,2,1,1,0,0,0,0,0,0,0,3,0,9,0,1,0,1,3,4,0,2,0,0,2,0,0,2,3,1,0,0,1,6,5,0,12,3,6,0 . . . chr22 19052481 19052605 - DGCR2, chr22 19052542 19052807 h38_mk_AluJb + 9 SRR1084842,SRR1102055,SRR1337412,SRR1340508,SRR1354446,SRR1442571,SRR657754,SRR657777,SRR661973, 58 1,0,0,4,2,2,2,2,0,0,1,2,0,0,2,3,0,1,1,0,2,3,7,0,0,0,0,0,2,3,1,0,0,0,0,0,0,3,2,0,3,6,1,2,1,0,0,0,0,0,2,4,0,1,0,0,2,0,0,2,0,2,0,3,0,1,3,0,0,4,0,0,2,3,2,7,4,0,1,0,1,0,0,0,0,6,0,0,0,0,1,0,0,1,0,5,7,1,0,0,0,3,0,0,5,5,4,0,7,6,1,0,0,3,0,1,1 17 0,0,0,3,0,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,6,0,1,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,8,2,0,0,4,0,0,0,0,0,0,0 118 0.019882 1 chr22 20399595 20399690 + ZNF74, chr22 20399562 20399761 h38_mk_AluSq2 - 46 SRR1072367,SRR1084842,SRR1102055,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1354446,SRR1360563,SRR1367943,SRR1386708,SRR1387264,SRR1390601,SRR1402900,SRR1408208,SRR1414897,SRR1416477,SRR1418127,SRR1421177,SRR1433796,SRR1434526,SRR1439873,SRR1440986,SRR1453341,SRR1453851,SRR1455925,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR601500,SRR602516,SRR602704,SRR607337,SRR657777,SRR661973,SRR662534,SRR814967,SRR818033,SRR818210, 82 2,1,0,5,1,0,3,2,1,1,0,0,1,1,5,3,1,3,0,0,3,2,2,1,2,0,1,1,1,1,1,0,0,1,3,2,0,5,0,6,2,1,1,3,0,2,3,1,0,1,1,3,0,1,0,1,1,1,2,2,2,0,0,4,2,0,1,0,2,2,1,0,3,2,1,0,1,0,1,2,3,3,0,2,4,1,0,0,2,2,3,0,1,4,0,2,3,0,2,1,0,0,1,0,0,1,5,1,1,8,0,1,0,4,3,2,0 90 2,0,3,3,1,1,3,2,2,0,4,1,1,2,2,1,4,2,0,0,4,2,10,0,2,3,4,0,3,1,1,2,2,2,1,1,2,2,0,4,4,1,0,3,1,3,6,1,2,2,1,4,1,4,1,3,3,1,4,0,0,0,0,1,3,2,1,3,0,3,6,1,1,0,1,6,1,2,0,3,0,1,1,3,5,1,1,0,0,0,4,0,1,6,1,5,9,0,0,3,0,4,0,0,5,3,4,0,6,3,6,3,1,3,5,7,0 116 0.330742 0 chr22 20399595 20399821 + ZNF74, chr22 20399562 20399761 h38_mk_AluSq2 - 1 SRR1453851, 82 2,1,0,5,1,0,3,2,1,1,0,0,1,1,5,3,1,3,0,0,3,2,2,1,2,0,1,1,1,1,1,0,0,1,3,2,0,5,0,6,2,1,1,3,0,2,3,1,0,1,1,3,0,1,0,1,1,1,2,2,2,0,0,4,2,0,1,0,2,2,1,0,3,2,1,0,1,0,1,2,3,3,0,2,4,1,0,0,2,2,3,0,1,4,0,2,3,0,2,1,0,0,1,0,0,1,5,1,1,8,0,1,0,4,3,2,0 2 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 0.175276 0 chr22 24220492 24220584 - GGT5, chr22 24220460 24220756 h38_mk_AluJ + 108 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 114 20,13,35,1,2,9,13,8,5,37,2,3,6,4,7,8,39,7,28,7,1,13,17,1,7,13,3,3,1,3,8,6,12,4,2,4,2,2,11,25,21,19,5,5,8,5,3,4,4,6,6,7,10,4,9,16,9,8,3,4,0,3,6,6,9,5,14,4,6,5,7,13,2,2,1,3,9,7,0,4,4,6,24,21,17,20,12,14,70,3,13,8,21,9,15,3,10,21,15,6,4,29,6,18,20,15,8,20,7,0,9,4,4,7,12,5,40 113 26,7,25,2,3,7,8,5,1,26,3,1,8,5,8,2,25,3,22,10,7,16,3,3,4,3,6,10,6,5,4,11,6,1,1,3,0,4,8,16,23,12,3,6,5,7,6,7,7,3,5,4,5,3,3,10,10,9,4,2,2,2,10,5,6,2,12,2,4,3,5,14,1,6,4,7,11,3,0,6,4,4,16,15,8,12,7,11,60,2,7,3,22,9,8,5,8,20,15,5,3,36,7,14,10,7,6,22,0,0,8,3,14,2,8,11,16 118 0.313639 1 chr22 24220637 24220728 - GGT5, chr22 24220460 24220756 h38_mk_AluJ + 1 SRR1337412, 42 1,1,3,0,0,0,0,0,0,7,0,0,0,2,0,1,1,0,2,1,0,2,0,1,1,1,0,0,1,0,1,1,0,0,1,0,0,0,1,2,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,2,0,0,0,0,0,0,1,1,4,1,0,0,0,1,1,1,0,0,2,0,0,0,0,0,2,0,0,0,6,1,3,0,0,0,1,1,1,0,0,14 4 0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr22 24343482 24343603 + SPECC1L, chr22 24343441 24343753 h38_mk_AluSx - 1 SRR1468514, 41 0,0,0,0,1,0,0,0,0,1,1,1,0,0,1,0,1,1,0,0,1,0,1,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,2,3,0,2,0,0,3,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,2,2,1,0,0,0,2,1,1,1,0,0,0,0,1,0,1,0,0,2,0,2,0,1,0,1,0,0,2,0,3,4,0,0,0,2,0,0,0,3,1 75 0,0,2,4,1,0,3,0,3,6,2,0,0,4,1,0,1,1,0,2,4,0,9,1,0,4,6,1,5,2,1,2,1,0,2,0,2,2,1,4,3,0,0,0,3,2,3,0,0,1,0,2,0,0,1,1,4,1,3,3,0,2,0,2,2,2,1,2,0,0,2,2,2,1,0,1,5,0,1,2,1,0,0,2,5,0,2,0,2,0,3,0,1,0,1,1,3,0,3,3,0,1,0,0,3,0,0,0,0,1,1,5,2,2,2,2,0 117 0.053033 0 chr2 224400381 224400505 - FAM124B, chr2 224400297 224400547 h38_mk_AluJo + 3 SRR1453851,SRR595926,SRR613627, 26 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,8,0,0,1,0,0,1,2,0,0,1,0,0,1,1,0,0,0,0,0,2,0,0,1,0,0,0,3,0,0,1,2,0,0,0,0,0,0,5,2,0,0,0,1,0,1,1,2,1,0,0,0,1,0 52 1,0,7,1,0,0,1,0,0,1,0,0,1,0,0,0,4,2,1,0,2,1,2,0,1,7,1,0,0,1,0,3,1,0,0,0,1,1,2,0,0,0,1,0,0,0,1,0,1,1,1,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,2,0,2,0,1,0,0,0,0,0,0,0,2,0,2,2,1,0,0,0,1,1,5,1,0,0,2,0,2,0,0,1,1,4,0,0,1,1,2,1,0,3,0,1,0,0,0,2,4 85 0.632255 0 chr22 25110001 25110118 - AL022323.1, chr22 25109826 25110155 h38_mk_AluJb + 57 SRR1084842,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1340508,SRR1341763,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1368772,SRR1386708,SRR1387264,SRR1390601,SRR1402900,SRR1408208,SRR1416477,SRR1416754,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1440986,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR595926,SRR600361,SRR604262,SRR607337,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818210, 92 0,0,0,3,5,4,2,2,3,0,1,2,3,4,6,2,0,0,2,0,2,1,2,1,6,1,0,5,4,1,7,6,0,5,6,1,4,0,1,5,4,2,1,2,7,5,6,0,3,2,0,5,3,2,2,0,5,0,3,4,0,3,1,6,7,0,0,1,4,2,2,3,3,2,1,3,5,3,0,2,2,3,0,3,5,4,1,1,1,1,4,0,3,1,1,1,3,2,1,4,0,2,2,0,10,5,0,6,1,9,11,5,9,8,0,9,0 99 1,0,2,5,1,5,7,2,2,0,2,1,3,3,9,2,1,5,1,0,3,0,6,1,2,1,1,2,7,4,8,7,2,6,5,2,5,2,3,10,2,0,1,2,0,4,2,3,1,6,0,3,3,1,3,2,10,0,3,2,0,0,2,5,4,0,1,1,3,3,3,4,4,0,2,1,5,3,1,3,2,5,0,4,3,4,0,1,1,1,8,0,3,4,1,2,1,2,6,5,0,1,1,0,1,3,1,2,3,1,8,4,1,15,1,8,0 107 0.960062 0 chr22 26718140 26718231 + MIAT, chr22 26717941 26718263 h38_mk_AluJb - 1 SRR1333741, 17 1,0,1,0,0,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,2,0,0,0,4,0,0,0,0,0,0,0,0 7 0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 226837548 226837838 + RHBDD1, chr2 226837539 226837802 h38_mk_AluSx1 - 1 SRR1498550, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 69 3,2,2,0,3,2,1,1,0,2,0,2,2,1,0,1,1,0,1,0,0,0,6,1,0,5,1,2,1,2,1,0,1,2,0,0,2,1,0,0,1,1,0,1,0,1,3,4,3,2,1,2,0,1,1,0,0,1,2,1,0,2,0,0,0,0,0,2,3,0,2,0,3,0,0,0,2,0,0,2,1,0,0,1,4,2,0,0,1,1,2,0,2,3,0,2,0,1,1,3,1,2,0,0,0,0,1,0,2,0,1,2,0,0,2,4,0 . . . chr22 28730420 28730548 - CHEK2, chr22 28730424 28730574 h38_mk_AluJ + 1 SRR1331579, 23 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,2,0,1,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,1,0,1,0,2,0,0,0,0,0,2,0,0,0,2,1,0,0,0,0,0,0,0,0,1,1 24 0,0,0,0,0,1,2,1,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,1,0,1,2,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,1,0,1,0,2,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,3,1,0 92 0.221830 0 chr22 29261200 29261360 - RHBDD3, chr22 29261303 29261621 h38_mk_AluJ + 1 SRR1435020, 90 2,0,9,1,4,1,0,5,7,4,5,2,5,3,7,2,8,3,0,2,2,3,16,0,6,2,3,9,1,0,4,7,0,8,0,5,8,2,0,12,2,6,0,5,5,1,3,0,0,3,6,3,0,2,4,6,0,13,0,7,7,0,3,0,3,0,2,3,0,8,1,25,3,0,0,2,5,2,5,5,1,7,6,4,2,14,2,2,16,1,4,0,3,5,5,26,1,15,0,3,0,10,4,8,16,0,1,0,1,8,2,6,0,3,14,5,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 93 0.621899 0 chr22 29472306 29472446 - RFPL1S, chr22 29472324 29472622 h38_mk_AluSc8 + 4 SRR1368772,SRR1390601,SRR1474777,SRR601500, 102 0,0,0,22,12,11,10,2,14,3,14,8,0,2,17,9,1,7,0,0,26,3,42,9,2,10,19,7,19,3,5,6,3,3,6,18,17,9,1,10,8,7,11,22,4,10,21,2,2,8,4,9,3,1,3,7,15,2,9,8,8,10,4,22,6,4,2,7,1,4,7,3,47,5,0,13,17,2,2,22,14,10,2,15,13,4,2,0,2,3,22,0,11,20,0,24,34,6,6,8,0,4,13,0,24,2,1,0,27,19,33,25,0,37,20,30,0 14 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,3,0,2,0,0,0,0,0,0,0,0,0,0,0,5,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0 . . . chr22 29472306 29472449 - RFPL1S, chr22 29472324 29472622 h38_mk_AluSc8 + 4 SRR1085495,SRR1102055,SRR1471943,SRR602704, 102 0,0,0,22,12,11,10,2,14,3,14,8,0,2,17,9,1,7,0,0,26,3,42,9,2,10,19,7,19,3,5,6,3,3,6,18,17,9,1,10,8,7,11,22,4,10,21,2,2,8,4,9,3,1,3,7,15,2,9,8,8,10,4,22,6,4,2,7,1,4,7,3,47,5,0,13,17,2,2,22,14,10,2,15,13,4,2,0,2,3,22,0,11,20,0,24,34,6,6,8,0,4,13,0,24,2,1,0,27,19,33,25,0,37,20,30,0 12 0,0,0,0,2,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,3,0,0,4,0,0,0,6,0,1,0,0,0,0,0,0,0,5,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 35 0.928716 0 chr22 29754749 29754863 - ZMAT5, chr22 29754580 29754895 h38_mk_AluJb + 62 SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1317344,SRR1320115,SRR1320963,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1348159,SRR1354446,SRR1356444,SRR1360128,SRR1360563,SRR1361567,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1413562,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1435020,SRR1437538,SRR1439873,SRR1442571,SRR1444622,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457503,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1488651,SRR1498550,SRR1500868,SRR601500,SRR602704,SRR607337,SRR613627,SRR661349,SRR662233,SRR662534,SRR814967, 116 8,2,22,15,8,3,4,14,21,11,11,6,9,6,14,6,22,15,4,11,13,8,36,6,8,8,10,11,9,9,12,14,10,17,9,9,15,4,9,17,9,5,7,10,9,5,9,11,14,6,8,6,14,8,4,9,8,9,7,10,5,4,6,17,12,4,12,5,9,12,11,8,12,6,7,12,13,5,13,7,8,21,14,16,14,10,17,10,19,7,11,2,8,8,9,14,17,23,12,8,0,9,5,3,13,11,3,6,4,10,9,6,12,8,9,10,12 85 0,0,0,4,3,1,2,4,1,2,6,1,1,1,1,0,3,2,0,1,2,1,7,3,1,0,1,0,2,3,0,0,2,5,1,0,3,4,0,3,2,4,0,1,6,1,1,2,2,4,0,0,4,1,2,1,1,0,0,4,2,0,2,5,1,1,4,2,0,4,6,3,3,0,3,1,5,2,1,1,2,2,2,2,6,1,0,2,3,1,1,0,0,4,0,1,6,0,1,3,0,3,0,0,1,0,0,2,1,0,5,1,1,2,0,1,0 118 0.392550 1 chr22 30558260 30558388 - GAL3ST1, chr22 30558111 30558435 h38_mk_AluJ4 + 8 SRR1072367,SRR1084842,SRR1331579,SRR1341365,SRR1415234,SRR1471817,SRR1487362,SRR613627, 58 1,0,0,1,2,0,1,2,0,2,1,1,0,2,1,2,1,3,0,0,1,1,2,2,0,0,0,0,0,0,0,1,0,1,0,1,1,2,0,0,0,2,0,0,0,0,1,0,0,2,1,0,0,1,1,0,0,0,0,2,0,2,0,0,0,0,1,1,4,3,2,1,0,0,0,1,1,1,3,0,0,0,1,0,0,2,1,2,0,0,0,1,0,1,1,1,0,1,0,2,1,1,1,0,0,0,1,0,1,0,0,1,0,1,5,0,0 54 1,0,1,3,1,0,0,1,0,1,5,1,1,1,2,0,1,0,0,1,0,0,1,5,0,0,1,1,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,2,0,0,1,3,0,0,1,2,0,1,0,1,0,1,1,0,1,1,0,0,0,0,0,1,2,0,0,0,1,1,0,3,1,0,3,0,3,0,3,1,0,2,4,0,0,0,0,1,0,0,0,1,1,0,3,0,0,2,0,1,1,1,3,0,0,1,0,2,0,0 111 0.253104 0 chr22 31182969 31183066 + RNF185, chr22 31182928 31183231 h38_mk_AluSq2 - 31 SRR1084649,SRR1084842,SRR1085495,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1331579,SRR1337098,SRR1340508,SRR1342045,SRR1348159,SRR1360128,SRR1390601,SRR1434526,SRR1440986,SRR1455925,SRR1487194,SRR1487362,SRR1487685,SRR602314,SRR602704,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR818210, 65 0,0,2,1,2,1,0,1,2,3,2,2,1,1,2,1,5,1,0,0,1,0,5,1,1,1,5,0,0,0,0,1,2,0,2,2,2,1,1,0,0,0,0,2,0,3,2,0,1,0,0,0,1,0,0,0,0,1,2,0,3,0,0,3,1,0,1,0,0,1,2,0,1,0,3,1,1,0,0,1,1,0,0,0,4,2,1,0,4,1,1,1,0,0,2,3,5,0,0,0,0,0,2,0,7,3,0,2,2,3,0,0,0,2,0,1,0 105 2,0,5,8,7,1,1,1,2,5,5,4,3,2,5,4,13,5,1,0,3,0,9,2,3,2,8,2,2,5,2,2,3,1,1,1,1,1,1,1,6,4,3,1,3,2,4,1,1,2,1,3,0,1,1,2,0,1,6,2,3,2,1,1,1,2,2,4,1,1,1,0,7,3,2,2,1,0,0,2,3,6,3,6,4,4,5,1,6,1,8,1,5,4,6,4,13,1,2,0,0,1,4,0,2,2,1,2,4,6,6,1,1,5,3,5,0 118 0.157598 1 chr2 232724574 232724691 + GIGYF2, chr2 232724546 232724862 h38_mk_AluJ - 6 SRR1331579,SRR1487362,SRR602314,SRR602704,SRR661349,SRR814967, 81 3,0,4,3,4,4,2,1,1,3,1,1,1,1,3,2,5,0,2,0,0,0,8,4,0,1,4,0,2,3,0,1,0,0,0,2,2,0,0,1,2,0,2,3,1,0,3,2,3,1,0,1,0,1,0,1,1,1,1,0,1,1,0,0,0,2,5,1,1,2,2,0,1,1,0,3,4,0,1,1,1,1,1,3,1,4,0,0,5,0,4,0,1,0,6,4,3,1,5,3,0,0,6,0,0,3,0,0,1,3,6,1,5,9,2,3,2 49 0,0,4,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,1,0,0,1,0,3,4,0,1,0,0,0,0,0,2,1,1,0,1,0,1,0,1,5,0,0,0,0,2,0,3,2,2,0,0,0,0,1,1,0,0,0,0,0,1,0,0,1,1,1,1,0,1,0,1,0,0,2,0,0,0,1,0,0,0,2,0,2,1,0,1,0,0,0,0,0,3,0,2,2,1,0,1,2,1,0,5,2,0,0,1,4,0,4,0,3,3,1,0 99 0.923457 0 chr2 232734417 232734486 + GIGYF2, chr2 232734210 232734516 h38_mk_AluJ - 42 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1314163,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1337412,SRR1340508,SRR1341365,SRR1348159,SRR1356619,SRR1361567,SRR1386708,SRR1387809,SRR1389979,SRR1408368,SRR1415234,SRR1416477,SRR1418127,SRR1434526,SRR1444678,SRR1447693,SRR1457503,SRR1468514,SRR1474553,SRR1487194,SRR1487685,SRR595926,SRR601500,SRR602314,SRR602704,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR662534,SRR814967,SRR818210, 83 2,1,5,7,3,0,1,2,0,3,3,1,1,3,6,1,4,5,0,1,0,3,8,2,0,0,5,1,1,3,1,0,0,0,1,0,1,0,1,1,5,3,2,1,0,1,1,1,2,2,6,1,1,2,2,0,5,0,2,3,0,0,0,1,1,0,2,1,1,0,2,0,3,0,2,3,4,0,1,2,3,1,0,0,2,3,2,0,0,1,3,3,0,4,4,2,3,0,4,4,0,1,1,0,8,3,1,0,4,2,0,6,0,5,0,6,3 103 5,8,4,5,3,3,3,3,1,1,1,3,6,1,6,1,6,4,2,0,4,5,5,4,1,2,6,4,2,1,1,2,5,3,2,0,0,1,1,2,7,1,1,4,0,1,0,3,2,1,5,4,0,4,3,4,2,2,4,4,4,6,2,7,3,1,1,3,3,1,1,0,3,2,2,5,4,0,1,2,2,2,4,2,3,1,3,0,5,2,3,1,0,2,5,2,4,5,2,7,0,0,3,0,14,6,7,0,3,17,6,7,2,8,6,7,6 110 0.819048 0 chr22 37025002 37025127 + MPST, chr22 37024980 37025108 h38_mk_AluJb - 2 SRR1437538,SRR818033, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 52 0,0,3,4,5,0,0,2,1,3,2,0,0,2,2,0,2,0,0,1,0,1,6,0,3,0,1,0,1,0,0,0,0,1,0,0,0,2,2,2,3,0,3,0,0,0,0,0,0,3,0,0,0,0,2,3,1,6,1,0,0,0,8,3,3,2,1,0,0,0,1,0,0,0,0,0,0,0,3,1,0,0,1,0,2,0,0,0,1,1,0,1,0,0,0,0,1,2,0,0,0,0,1,0,8,0,0,3,0,0,3,1,1,5,2,0,1 118 0.019990 1 chr22 37565600 37565722 + CDC42EP1, chr22 37565558 37565888 h38_mk_AluSq - 4 SRR1387809,SRR1433796,SRR1468514,SRR1476571, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 78 21,0,5,2,0,7,1,3,0,4,0,0,4,0,4,3,5,1,1,1,0,0,1,1,1,1,1,0,0,0,4,2,1,3,0,0,2,1,3,2,2,3,0,0,3,0,2,1,3,0,8,1,0,1,0,0,1,25,0,2,1,0,0,2,1,1,0,0,4,4,8,1,0,0,0,2,2,1,4,0,2,1,3,3,4,1,5,1,8,0,1,0,2,4,1,1,2,3,6,7,0,7,3,0,0,0,0,0,4,4,1,1,0,3,7,0,1 118 0.097134 1 chr22 39486166 39486248 + MGAT3, chr22 39486135 39486446 h38_mk_AluS - 7 SRR1084842,SRR1085495,SRR1455925,SRR1487194,SRR613627,SRR662534,SRR818033, 10 0,0,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0 87 1,1,2,3,3,4,2,2,8,0,6,3,0,0,2,5,2,2,0,1,3,0,13,3,2,2,4,1,4,0,0,3,0,8,3,3,5,4,0,2,4,0,2,6,2,2,2,0,0,1,1,4,1,3,3,2,6,1,4,3,2,0,0,2,1,1,0,4,2,1,3,3,7,4,0,5,2,3,1,5,0,3,0,4,6,0,0,0,0,1,3,0,3,7,2,18,11,1,2,3,0,9,3,0,2,9,1,0,3,0,0,2,0,3,1,5,0 95 0.839827 0 chr2 240627660 240627840 + GPR35, chr2 240627646 240627781 h38_mk_AluJ - 1 SRR604262, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 19 0,0,0,0,0,0,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,1,0,0,0,2,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,5,0,0,0,0,1,0,0,0,0,0,1,3,0,0,2,0,0,0,0 104 0.092202 0 chr22 40860678 40860793 + XPNPEP3, chr22 40860647 40860873 h38_mk_AluJb - 51 SRR1077405,SRR1084649,SRR1084842,SRR1102055,SRR1317344,SRR1318163,SRR1328895,SRR1331579,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1342045,SRR1360563,SRR1368772,SRR1375571,SRR1387809,SRR1390601,SRR1399779,SRR1408208,SRR1413562,SRR1415234,SRR1416477,SRR1418127,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1444678,SRR1453851,SRR1457482,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR602314,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR661349,SRR661973,SRR662534,SRR814967, 79 0,6,2,5,1,0,2,0,0,1,5,5,0,0,2,2,2,2,2,0,2,4,3,1,0,1,0,3,0,1,0,2,0,2,0,0,5,1,1,0,1,1,0,3,2,5,2,0,2,1,6,2,0,2,0,1,2,5,1,4,0,2,0,0,1,4,2,2,0,2,1,0,1,3,1,1,4,1,0,6,2,1,0,3,2,2,2,0,0,0,1,1,0,1,2,0,2,1,4,4,0,2,1,0,1,1,0,3,8,3,0,2,0,5,0,0,1 87 0,19,6,6,0,0,4,3,2,0,2,6,2,5,6,6,8,3,3,0,2,10,5,7,4,2,0,0,3,0,0,2,0,7,0,0,5,2,1,4,0,3,0,5,3,0,7,0,1,1,19,6,2,4,0,2,8,1,5,4,0,1,3,7,3,0,1,3,4,3,4,0,1,4,1,0,6,6,3,8,3,5,3,4,4,8,4,0,10,0,1,0,4,0,2,3,2,4,11,9,0,5,0,2,7,3,1,12,14,2,9,2,0,6,0,1,0 107 0.816945 0 chr22 40860748 40860793 + XPNPEP3, chr22 40860647 40860873 h38_mk_AluJb - 1 SRR1487685, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 87 0,19,6,6,0,0,4,3,2,0,2,6,2,5,6,6,8,3,3,0,2,10,5,7,4,2,0,0,3,0,0,2,0,7,0,0,5,2,1,4,0,3,0,5,3,0,7,0,1,1,19,6,2,4,0,2,8,1,5,4,0,1,3,7,3,0,1,3,4,3,4,0,1,4,1,0,6,6,3,8,3,5,3,4,4,8,4,0,10,0,1,0,4,0,2,3,2,4,11,9,0,5,0,2,7,3,1,12,14,2,9,2,0,6,0,1,0 101 0.761402 0 chr22 41284901 41285153 - RANGAP1, chr22 41284870 41285192 h38_mk_AluJ + 14 SRR1077405,SRR1099499,SRR1318163,SRR1328895,SRR1337412,SRR1342045,SRR1348360,SRR1375571,SRR1413562,SRR1414897,SRR1415234,SRR1439873,SRR1471817,SRR1471943, 115 10,19,7,41,32,20,28,11,23,6,30,29,9,11,7,19,12,33,3,8,18,4,67,15,11,8,24,20,25,10,13,14,6,23,4,26,16,14,4,30,22,12,31,32,32,10,22,13,4,21,15,24,13,7,11,13,20,17,19,20,13,16,12,25,20,13,2,19,17,6,16,17,33,28,6,27,16,12,2,46,24,34,1,31,35,25,3,1,17,7,18,1,10,19,8,40,43,23,3,14,0,13,8,3,25,20,5,21,26,9,71,19,0,28,34,46,1 84 1,9,0,4,7,4,2,1,0,0,4,5,1,2,0,11,1,1,0,0,5,2,9,2,1,6,4,7,0,1,5,2,2,3,0,2,4,8,0,5,0,2,0,1,3,2,2,3,3,7,10,2,0,2,2,1,3,2,5,3,2,1,0,7,0,3,0,0,2,2,1,0,9,0,0,3,5,3,3,12,1,0,0,3,6,1,1,1,2,0,0,0,1,0,0,5,1,1,0,1,0,3,2,8,0,0,0,3,4,1,9,5,0,2,2,16,0 118 0.698491 1 chr2 241754631 241754746 + D2HGDH, chr2 241754592 241754912 h38_mk_AluJ - 74 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1335446,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1356444,SRR1357478,SRR1360563,SRR1361567,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1415234,SRR1416477,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR614802,SRR657635,SRR657754,SRR658307,SRR661973,SRR662534,SRR663633,SRR818033,SRR818210, 112 8,4,6,9,3,4,4,3,8,20,5,5,7,5,8,4,2,2,1,3,4,19,6,4,5,2,16,4,2,10,2,2,1,2,6,3,2,5,7,7,8,3,3,9,4,8,3,6,7,2,6,6,9,8,9,2,7,2,4,3,0,0,5,6,12,5,2,4,8,2,6,2,2,4,5,5,17,2,1,6,1,8,5,5,14,7,8,7,6,3,7,0,6,6,3,3,2,2,0,7,5,0,1,27,15,6,4,7,8,7,3,2,3,5,4,9,5 95 6,3,4,4,3,6,0,3,0,14,3,1,3,6,5,3,1,0,3,0,0,7,3,1,5,2,2,2,0,6,1,3,0,1,2,1,0,0,1,1,1,1,2,2,1,2,3,0,5,0,5,4,1,1,5,3,5,1,5,3,1,2,2,4,3,5,1,0,3,5,4,0,2,2,1,1,8,3,0,2,1,4,1,5,4,4,6,3,5,0,2,0,3,6,1,2,4,0,0,3,0,1,2,0,7,7,1,8,2,4,0,3,2,2,2,3,0 117 0.954438 0 chr22 42092119 42092232 + NDUFA6-AS1, chr22 42092084 42092397 h38_mk_AluSx - 57 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1318163,SRR1326179,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1348360,SRR1354446,SRR1356619,SRR1360563,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1402900,SRR1408368,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1433796,SRR1434526,SRR1435775,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1454803,SRR1455925,SRR1457482,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1487685,SRR1498550,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR657635,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967, 111 1,1,4,5,7,0,5,3,6,2,7,1,2,3,8,0,5,6,2,3,14,3,13,3,7,2,3,3,5,3,4,6,3,6,2,5,10,5,0,4,7,1,5,2,1,1,4,2,5,6,3,5,6,6,4,2,5,2,8,8,2,3,1,3,13,7,0,2,9,1,5,5,9,3,1,3,8,2,1,6,5,6,3,12,4,2,2,3,3,2,6,0,1,5,8,5,14,5,7,3,3,7,3,0,6,5,1,9,5,7,10,17,2,17,6,6,6 110 2,0,5,4,12,3,9,7,6,0,7,3,1,2,7,1,6,5,0,2,8,0,21,3,1,1,6,6,5,1,5,15,2,11,1,4,3,6,4,6,5,6,5,6,6,6,4,6,1,2,2,6,3,5,4,3,2,5,4,6,2,7,3,5,7,5,1,1,8,3,4,4,4,11,3,8,6,6,5,3,6,8,2,3,7,1,4,0,2,3,7,0,2,3,5,11,11,6,4,7,1,1,2,8,7,9,2,0,8,16,18,14,1,12,5,13,2 118 0.434452 1 chr22 44809006 44809098 + ARHGAP8,PRR5,PRR5-ARHGAP8, chr22 44808828 44809130 h38_mk_AluJo - 4 SRR1413562,SRR1360128,SRR1084649,SRR1439873, 39 0,0,1,1,0,2,0,0,0,0,0,0,0,1,1,0,1,1,1,0,1,0,1,0,0,0,1,0,0,0,0,0,2,1,0,0,2,0,0,0,1,1,0,1,0,0,1,1,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,1,0,1,0,1,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,2,2,1,0,0,1,1,0,0,1,0,0 17 0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,2,2,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0 87 0.296137 0 chr22 45321602 45321793 + FAM118A, chr22 45321391 45321722 h38_mk_AluJo - 10 SRR1084842,SRR1340508,SRR1390601,SRR1416477,SRR1439873,SRR1453851,SRR1474777,SRR1487362,SRR601500,SRR662534, 46 0,0,0,1,1,0,6,0,1,0,3,0,1,0,0,2,1,0,0,0,1,0,3,0,0,1,0,0,0,0,4,1,0,2,0,1,1,0,0,0,0,1,0,2,0,0,0,0,0,0,0,2,0,0,1,2,0,0,0,0,0,0,0,2,0,0,1,0,1,1,2,1,1,0,0,0,4,2,1,1,0,2,0,1,2,2,0,0,0,0,0,0,1,3,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,2,0,3,0,5,3,3,0 50 1,0,0,3,1,0,1,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,8,0,0,1,0,0,1,0,0,0,1,1,0,1,1,1,0,0,1,0,2,2,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,1,2,0,0,3,2,0,0,0,0,0,1,1,2,0,1,1,0,1,0,1,1,2,0,1,2,1,0,0,1,0,0,0,0,1,2,1,0,1,0,0,0,1,0,0,0,0,2,1,0,3,2,5,0,0,1,3,0 114 0.076720 0 chr22 46292203 46292328 + TTC38, chr22 46292159 46292367 h38_mk_AluJ4 - 105 SRR1072367,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR821602, 114 8,2,9,4,0,9,2,8,4,22,2,3,8,14,9,3,15,4,4,2,5,11,4,1,4,7,8,1,3,8,9,1,5,1,5,2,5,1,4,4,13,11,4,4,3,11,10,2,7,6,6,4,5,4,15,0,7,6,5,7,3,4,3,1,7,3,17,3,8,8,6,3,4,2,7,8,12,3,6,3,2,9,5,8,22,14,14,4,13,2,2,2,7,7,3,2,2,3,9,6,0,8,2,3,14,17,6,12,5,3,3,8,26,4,13,1,6 115 22,5,11,7,2,12,7,10,4,31,5,2,10,12,16,4,27,4,14,5,3,11,8,4,8,11,3,5,3,5,9,5,7,5,5,4,5,4,11,6,7,6,5,2,8,11,4,11,10,4,14,3,12,7,13,5,6,6,7,5,4,6,7,4,10,5,19,0,8,15,3,7,2,5,9,8,15,4,7,4,4,4,9,12,9,11,10,10,15,3,5,8,5,9,8,5,5,4,8,9,2,8,6,0,18,21,6,20,5,4,2,8,27,4,19,3,9 118 0.536732 1 chr2 27299530 27299655 + DNAJC5G,TRIM54, chr2 27299500 27299685 h38_mk_AluJb - 58 SRR1315970,SRR1317344,SRR1320115,SRR1331579,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360563,SRR1386708,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1432123,SRR1437538,SRR1440986,SRR1442571,SRR1453341,SRR1453851,SRR1455925,SRR1468514,SRR1468955,SRR1474777,SRR1487194,SRR595926,SRR601500,SRR602704,SRR607337,SRR613627,SRR657754,SRR658307,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210,SRR1318163,SRR1348159,SRR1356444,SRR1367943,SRR1381673,SRR1387809,SRR1434526,SRR1454803,SRR1474553,SRR1476571,SRR661349,SRR663633,SRR821602, 98 1,0,3,3,3,4,1,0,6,1,8,3,7,3,5,1,4,3,2,0,5,4,2,2,6,2,6,7,4,2,10,10,1,4,0,2,0,1,1,7,4,1,0,8,10,8,9,1,2,5,0,3,0,6,3,1,8,0,3,2,1,0,3,5,9,4,0,1,2,7,4,1,6,1,1,1,5,5,0,2,5,8,3,3,2,0,1,1,1,4,15,0,0,3,7,5,4,0,1,4,0,2,0,0,2,11,5,14,9,2,11,3,13,8,5,5,2 79 0,0,0,0,0,2,4,0,3,0,2,1,2,0,1,1,4,0,0,0,1,0,6,2,1,0,4,3,1,1,3,7,2,4,0,6,0,1,2,3,0,4,0,2,6,4,3,0,1,5,1,4,0,4,0,0,4,0,1,1,1,0,1,1,2,1,0,0,0,4,4,1,4,0,0,0,3,4,1,1,2,7,1,1,5,2,0,2,0,1,2,0,5,5,0,2,3,0,1,2,0,1,1,0,0,6,0,1,2,9,14,1,5,3,1,6,3 115 0.363824 0 chr2 27350314 27350632 - GTF3C2, chr2 27350508 27350674 h38_mk_AluJ + 1 SRR1387809, 72 3,1,2,2,4,0,0,1,1,3,1,0,2,2,2,2,3,1,3,0,0,1,1,1,2,0,2,0,0,0,0,0,1,0,0,0,0,2,0,2,2,2,1,6,5,0,0,0,1,1,2,3,0,0,3,0,3,0,0,1,1,0,0,1,0,0,0,0,0,1,2,0,4,1,3,1,6,0,0,1,2,4,0,0,2,2,3,0,1,2,2,0,0,1,0,2,2,0,1,0,1,2,1,0,2,2,0,2,4,1,6,2,0,3,1,3,5 16 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,1,2,1,0,0,2,0,0 . . . chr2 29088085 29088242 + CLIP4, chr2 29088057 29088191 h38_mk_AluSx - 1 SRR1402900, 56 3,0,0,0,2,0,0,0,0,12,0,0,1,0,0,0,2,3,0,3,3,0,4,1,6,0,4,0,0,4,3,1,0,0,2,2,3,3,0,1,0,4,0,0,0,6,0,0,2,1,0,1,0,0,4,4,1,0,0,0,8,1,0,0,0,0,3,2,1,0,2,0,0,3,3,4,5,0,0,1,1,0,7,4,0,0,2,0,2,4,5,0,0,0,3,3,0,11,0,8,0,4,0,0,7,8,5,0,0,0,0,0,0,2,3,0,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 32177477 32177596 + SLC30A6, chr2 32177310 32177598 h38_mk_AluSz - 5 SRR1331579,SRR1340508,SRR1433796,SRR814967,SRR818033, 31 0,0,0,1,1,0,2,0,0,0,0,1,0,1,0,0,3,3,0,0,0,1,1,0,1,1,1,0,0,0,1,1,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,2,0,0,0,0,0,1,0,0,0,0,1,0,4,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,1,1,0 43 0,0,0,3,0,1,0,0,1,0,0,1,1,0,1,2,2,1,0,0,0,0,3,1,2,1,2,0,2,1,1,0,0,0,0,1,0,2,0,0,0,2,0,1,0,0,1,1,0,0,0,0,0,0,1,2,3,2,1,0,0,0,0,0,1,0,1,0,0,0,1,0,1,0,0,1,2,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,1,0,0,0,2,3,1,0 110 0.188078 0 chr2 33567036 33567204 - AC020594.1, chr2 33567062 33567247 h38_mk_AluJo + 1 SRR1468514, 73 0,1,10,0,4,0,3,6,3,2,0,6,3,1,1,2,2,6,0,4,1,4,0,8,0,0,6,1,1,2,4,0,0,3,2,4,3,0,0,16,9,0,0,0,3,8,6,3,4,0,5,6,0,2,0,2,3,26,5,0,0,1,0,0,12,0,0,2,2,7,5,0,0,1,0,3,3,2,0,1,0,5,7,7,0,0,4,1,5,1,5,0,11,0,4,1,0,0,0,8,0,7,0,0,19,3,0,0,10,12,6,1,0,5,10,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 . . . chr2 36378854 36378924 + CRIM1, chr2 36378797 36378881 h38_mk_Alu - 2 SRR1337412,SRR1487362, 34 0,1,0,1,0,1,0,0,0,1,0,0,0,0,0,1,0,0,2,0,0,1,0,0,0,4,0,0,0,0,0,2,2,1,0,0,0,0,0,0,0,1,0,0,0,0,1,2,0,0,1,0,1,0,1,0,1,0,0,0,1,0,0,0,0,0,0,2,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,1,2,0,0,1,0,0,0,1,0,0,0,0,8,4,0,0,1,0,5,0,0,0,0,0,3 16 0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,2,5,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 . . . chr2 38566107 38566200 - HNRNPLL, chr2 38566092 38566403 h38_mk_AluSx1 + 103 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1442571,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 115 6,3,12,25,11,16,20,7,12,8,12,7,11,11,15,5,7,9,1,8,12,5,51,3,18,10,17,9,21,10,10,19,2,17,12,18,26,12,0,7,24,15,6,10,12,9,20,3,10,9,5,10,8,7,14,22,17,4,2,7,7,14,9,14,7,3,2,4,3,11,10,14,13,4,6,16,17,7,1,14,2,13,6,17,17,38,7,7,2,2,13,2,12,13,14,22,11,5,5,12,2,10,18,8,13,14,0,18,10,15,15,20,11,20,18,16,1 113 5,2,13,13,5,3,12,3,4,7,7,2,2,3,5,5,2,5,1,0,4,1,26,3,9,7,10,4,8,2,6,8,4,10,6,6,17,6,1,6,3,12,8,7,4,6,15,2,6,2,2,6,1,3,6,8,6,1,5,6,3,3,4,10,2,4,1,2,7,4,5,12,8,6,3,4,8,6,0,5,8,6,1,5,11,32,6,0,2,3,7,1,5,12,7,14,12,2,6,6,1,5,5,32,15,5,2,0,8,6,10,9,1,11,11,12,4 118 0.229688 1 chr2 38779258 38779441 + GEMIN6, chr2 38779227 38779539 h38_mk_AluSz - 6 SRR1328895,SRR1433796,SRR1457482,SRR1485459,SRR662233,SRR818033, 10 0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,3,0,0 90 3,0,0,2,7,1,1,0,5,1,0,1,1,2,4,3,6,2,0,3,4,2,6,4,1,1,4,4,1,0,2,4,1,3,0,0,3,3,0,0,1,0,0,5,1,0,1,1,2,4,1,5,1,1,1,3,0,1,1,2,3,0,5,1,1,0,2,1,1,1,5,6,0,3,0,1,0,1,4,0,3,3,3,9,2,2,0,0,6,3,2,0,2,1,1,2,1,1,2,2,0,6,1,7,4,0,0,7,3,2,2,2,1,0,7,1,1 118 0.092046 1 chr2 39453839 39453931 + AC007388.1, chr2 39453617 39453963 h38_mk_AluJo - 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 28,7,27,84,29,70,83,29,59,20,84,18,9,34,61,55,35,61,13,9,51,16,103,50,67,28,76,36,74,30,60,39,30,44,36,41,36,48,5,78,40,75,43,82,61,84,62,28,18,71,26,52,24,24,41,53,61,14,47,45,15,27,17,46,80,37,10,14,40,75,45,51,69,37,23,66,110,58,14,74,46,53,10,103,46,58,34,15,15,25,85,6,38,46,56,71,48,15,30,47,10,79,34,13,107,86,17,51,40,96,89,57,22,90,49,119,7 117 36,14,31,125,40,79,132,38,86,30,87,42,18,42,93,61,60,95,33,14,53,29,162,64,64,39,118,69,90,43,93,81,38,52,42,47,36,71,13,135,66,84,57,118,96,129,70,39,34,84,36,97,39,34,52,76,127,26,72,43,21,32,25,83,123,57,12,26,70,92,62,51,143,56,25,74,160,74,12,108,73,71,16,119,74,87,47,22,22,39,102,7,52,96,80,80,88,35,37,92,14,96,56,41,97,168,39,68,69,191,190,121,50,150,111,188,27 118 0.999196 1 chr2 42753115 42753277 + MTA3, chr2 42752920 42753238 h38_mk_AluJ - 1 SRR1361567, 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,3,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,2,0,0,0,0,0 21 1,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,3,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0 118 0.005317 1 chr2 46910780 46910873 - MCFD2, chr2 46910748 46911028 h38_mk_AluJ + 4 SRR1320963,SRR1326179,SRR1360128,SRR1399779, 39 0,0,1,0,1,0,0,1,0,0,1,2,0,2,2,0,1,0,0,0,2,1,3,0,0,2,1,0,1,0,1,0,1,1,0,0,1,0,0,0,0,1,0,1,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,1,2,3,0,0,0,2,0,0,2,0,1,1,0,0,1,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,1,0,0,2,0,0,0,0,1,0,1,0 31 0,0,0,1,0,0,0,0,1,0,1,0,0,1,2,1,2,1,0,1,0,0,1,0,1,1,0,0,1,0,0,0,2,0,0,1,1,0,0,0,0,0,1,0,1,1,1,0,0,1,2,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 118 0.053685 1 chr2 54050958 54051050 + ACYP2, chr2 54050765 54051073 h38_mk_AluJo - 100 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 106 16,2,8,8,8,4,4,8,0,13,6,8,9,7,19,4,8,13,4,4,6,17,40,12,8,5,10,3,4,14,3,1,5,7,4,9,0,7,7,4,13,22,0,5,7,11,8,8,18,11,12,8,3,8,3,7,10,13,5,9,22,0,6,9,11,4,15,4,6,3,15,15,11,8,6,10,8,2,19,0,8,7,17,14,13,11,5,3,21,8,0,0,7,4,10,9,14,13,11,0,0,9,3,0,37,13,0,15,7,7,5,7,6,6,4,11,5 112 14,2,5,5,16,1,10,8,8,12,4,5,10,6,12,4,10,8,3,6,10,11,15,11,10,0,6,4,6,10,7,10,2,7,3,6,3,10,5,5,9,16,2,2,6,11,5,15,12,15,22,2,3,4,8,5,6,10,8,7,28,6,9,14,12,0,13,4,9,6,6,9,8,6,11,4,9,1,28,3,3,23,16,18,18,8,5,9,22,8,4,0,5,13,6,3,9,12,13,6,0,8,8,10,9,20,5,23,5,23,11,6,3,11,13,18,0 113 0.995020 0 chr2 55266381 55266518 - MTIF2, chr2 55266232 55266549 h38_mk_AluSz + 83 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1357478,SRR1367943,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1418837,SRR1421177,SRR1434526,SRR1435293,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1487194,SRR1487685,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 111 7,6,3,15,2,8,24,3,4,5,8,6,2,2,7,6,2,2,2,5,2,3,11,5,5,7,5,4,8,3,3,3,2,1,4,5,3,1,2,9,7,8,5,18,4,8,6,4,4,7,4,3,5,4,3,5,3,3,5,5,6,3,0,11,6,2,3,3,4,2,5,0,4,7,0,20,11,2,5,6,3,8,1,1,9,0,3,0,1,2,7,1,2,2,1,5,4,4,6,4,1,2,3,0,15,11,1,3,6,9,5,7,2,8,7,6,6 109 6,6,2,7,4,6,15,2,3,3,9,3,3,2,8,1,1,5,4,5,2,8,13,3,5,6,6,2,10,5,1,4,0,2,2,3,2,0,1,7,2,5,3,9,2,7,3,3,2,2,2,1,1,1,5,3,1,1,4,0,1,1,0,5,4,2,3,1,1,1,1,3,2,3,5,8,8,2,2,7,4,6,1,2,2,0,2,0,5,1,3,1,2,4,4,3,2,1,7,2,0,0,6,2,9,2,1,14,7,7,5,3,2,15,4,5,1 118 0.269153 1 chr2 58026744 58026861 + VRK2, chr2 58026698 58027028 h38_mk_AluJb - 10 SRR1072367,SRR1077405,SRR1328895,SRR1415234,SRR1432123,SRR1433796,SRR1435293,SRR1447693,SRR1471817,SRR607337, 52 8,16,1,0,0,0,0,0,0,3,0,2,3,0,1,3,0,0,0,1,1,5,0,0,0,0,1,0,0,1,0,0,0,1,1,0,0,1,0,0,4,2,0,2,0,0,1,0,1,0,11,0,1,1,0,0,2,2,1,0,3,0,0,1,1,2,1,2,6,0,4,0,1,1,1,0,0,0,3,0,1,0,1,1,3,0,0,0,0,0,1,0,1,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,2,2,0,0,2,2,1,0,0 27 3,2,0,0,0,0,2,0,0,1,0,0,0,1,0,2,0,1,0,0,0,2,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,6,1,0,2,0,0,2,0,0,0,0,2,0,1,0,0,0,0,0,1,0,1,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0 53 0.985849 0 chr2 61534558 61534654 - XPO1, chr2 61534391 61534708 h38_mk_AluSx1 + 7 SRR1077405,SRR1341365,SRR1368772,SRR1402900,SRR1485459,SRR602704,SRR607337, 110 6,7,4,9,6,2,6,3,3,1,14,9,7,4,17,11,7,4,3,2,6,10,18,9,7,5,3,6,6,3,11,1,8,2,4,7,4,10,1,3,10,9,3,7,1,5,4,4,6,2,9,4,1,1,5,4,8,5,3,12,6,2,0,9,0,1,8,5,6,2,12,1,11,8,5,10,12,0,6,11,11,1,2,21,3,6,17,1,8,1,1,0,2,8,8,11,18,7,7,13,2,20,9,0,16,10,0,3,8,18,7,10,0,18,7,10,3 17 0,1,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,2,0,0,0,0,0,0,0,3,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0 117 0.252129 0 chr2 63857550 63857718 + UGP2, chr2 63857345 63857675 h38_mk_AluJb - 75 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474777,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 113 3,4,7,27,9,12,19,5,13,6,19,15,4,8,19,16,8,22,4,2,12,6,47,9,20,20,21,3,17,10,8,6,15,10,8,21,22,21,3,18,12,25,16,23,6,9,11,5,7,10,1,15,8,6,6,13,17,6,17,11,16,20,2,19,14,7,12,8,12,12,19,5,37,10,7,17,24,9,5,32,14,36,2,10,22,7,4,0,10,4,21,1,5,10,15,17,33,5,14,13,0,9,8,0,21,24,17,4,34,23,40,31,0,34,11,44,5 116 6,2,6,20,9,17,24,3,7,6,15,12,6,6,17,15,2,13,1,5,15,3,48,11,19,11,17,6,13,1,9,8,4,13,7,18,14,8,4,7,9,13,18,14,5,16,9,6,2,3,0,11,3,6,6,6,13,4,19,16,10,17,3,26,8,4,9,5,8,12,13,8,29,13,6,16,22,3,6,19,5,27,3,6,15,9,7,4,6,3,19,2,6,20,4,21,20,4,11,13,1,6,12,9,19,20,12,9,33,20,37,18,3,22,22,40,4 118 0.068725 1 chr2 65476258 65476349 + AC007389.1, chr2 65476225 65476285 h38_mk_AluSc - 1 SRR657635, 66 1,0,2,0,0,1,0,0,5,0,4,0,0,3,0,0,0,2,1,2,3,0,2,0,0,1,2,1,1,1,1,1,0,2,0,2,2,1,0,3,0,4,0,4,1,4,1,1,2,4,0,3,0,1,0,0,2,1,0,0,2,1,0,10,3,2,2,2,0,1,1,4,3,0,0,0,1,2,1,0,2,0,1,2,0,3,0,2,4,0,0,0,0,4,0,3,4,0,0,2,0,1,0,0,2,3,0,0,2,0,0,0,1,4,0,1,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr2 73041607 73041661 - SFXN5, chr2 73041400 73041693 h38_mk_AluS + 3 SRR1360128,SRR1413562,SRR1414897, 43 0,0,6,0,1,0,0,0,0,0,0,0,3,5,0,2,3,0,0,0,0,0,7,0,0,0,3,0,0,0,0,0,4,0,1,1,0,0,0,0,3,1,0,0,0,0,0,2,6,7,0,0,5,4,0,0,1,0,0,0,4,0,0,4,0,0,0,0,0,0,0,0,2,0,2,0,2,0,2,0,2,5,3,0,0,0,2,1,10,0,0,0,2,3,2,0,1,0,9,2,0,0,1,0,0,0,0,0,1,0,3,5,0,2,2,0,0 41 0,0,0,1,0,0,0,0,0,0,2,0,3,0,0,1,0,2,0,0,1,0,7,0,0,2,0,0,0,0,3,1,4,0,2,0,0,0,3,0,0,1,0,0,1,1,0,0,6,5,0,0,0,3,5,0,5,0,4,0,0,0,0,6,5,0,2,0,1,1,0,0,2,5,2,2,1,2,0,1,0,0,0,0,3,0,3,0,0,2,3,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0,0 118 0.015515 1 chr2 73732584 73732700 - TPRKB, chr2 73732420 73732738 h38_mk_AluSq2 + 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 19,20,34,24,17,21,32,26,27,25,16,11,19,16,24,10,31,21,22,6,21,16,66,16,17,19,29,16,14,10,16,26,20,28,9,20,30,19,7,28,26,25,14,24,22,27,33,15,17,13,28,19,13,16,22,18,34,23,14,29,29,16,35,38,19,16,16,14,22,25,27,25,31,23,13,15,45,19,21,17,27,21,14,26,30,49,18,6,8,13,29,7,35,17,14,22,15,19,13,20,1,10,19,22,33,49,44,32,38,55,52,22,40,37,25,29,12 117 28,11,10,18,12,19,21,10,20,18,8,13,7,17,24,16,22,16,7,2,10,12,48,14,15,8,14,11,4,8,11,13,14,14,12,19,10,8,2,20,23,17,9,11,18,20,13,18,11,16,19,13,7,9,16,17,27,16,15,14,19,7,21,10,13,7,11,8,12,18,18,14,21,19,6,13,29,15,6,14,9,12,14,14,21,31,15,7,12,11,20,3,16,17,22,19,12,7,10,12,1,7,14,20,23,31,4,19,14,30,25,19,10,22,21,18,9 118 0.418558 1 chr2 74156827 74156921 + BOLA3-AS1, chr2 74156797 74156951 h38_mk_AluJ - 1 SRR1421177, 25 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,2,0,1,3,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,1,0,0,0,0,0,0,1,0,0,0,1,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,3,0,0,0,0,0,1 12 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,1,1,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 . . . chr2 74201382 74201479 + MTHFD2, chr2 74201337 74201649 h38_mk_AluJb - 21 SRR1084649,SRR1102055,SRR1317344,SRR1331579,SRR1342045,SRR1348159,SRR1402900,SRR1414897,SRR1444622,SRR1468514,SRR1487685,SRR1498550,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR658307,SRR662534,SRR818033,SRR818210, 54 0,0,1,1,0,0,4,2,1,0,2,0,0,0,0,0,19,0,0,1,1,0,0,0,2,5,4,0,0,1,0,0,0,1,0,0,1,1,0,1,1,1,0,0,0,1,0,0,0,2,0,0,0,0,0,1,1,0,1,0,1,0,0,0,0,0,2,0,0,1,0,0,1,0,0,2,2,1,2,0,0,1,1,3,4,1,8,0,21,0,2,0,1,1,4,1,3,5,4,0,0,1,0,0,0,0,0,3,0,0,0,1,0,1,5,3,1 67 7,0,3,0,1,1,4,3,0,1,2,1,1,0,3,1,18,1,1,3,0,0,1,0,0,6,3,1,2,0,1,0,3,0,1,2,3,0,1,1,0,0,0,0,0,2,0,1,0,2,0,1,1,0,0,0,1,2,0,0,1,2,0,0,1,0,2,0,0,1,1,0,0,0,0,0,2,0,2,0,0,1,0,2,0,2,1,0,15,0,0,2,2,3,1,2,1,0,2,0,0,6,1,0,1,1,1,6,0,1,0,4,2,3,6,1,0 112 0.309876 0 chr2 85425308 85425407 + SH2D6, chr2 85425240 85425577 h38_mk_AluSq2 - 7 SRR1340508,SRR1348159,SRR1368772,SRR1390601,SRR1464373,SRR1498550,SRR595926, 56 2,2,1,0,1,1,3,0,0,0,0,0,0,1,1,1,0,0,1,1,0,0,2,1,3,0,1,1,0,1,1,1,1,2,0,1,2,0,2,1,0,0,1,3,0,0,0,1,1,0,0,0,0,1,1,0,0,5,0,0,1,0,1,2,0,0,1,2,2,1,1,0,0,2,1,1,1,0,0,2,1,1,1,1,0,0,0,0,3,2,3,0,0,0,0,2,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0 53 0,0,2,0,1,3,0,0,0,0,0,0,0,1,0,1,2,2,0,0,0,3,2,1,0,1,3,0,0,0,2,4,0,0,2,2,1,1,1,0,1,2,0,1,2,1,2,2,0,1,2,1,0,1,0,0,0,0,0,2,0,0,1,2,1,0,0,0,0,1,1,0,2,1,0,2,3,0,0,0,0,0,1,0,0,5,0,0,3,1,4,0,0,1,0,0,0,0,2,3,0,0,0,1,1,0,0,0,0,0,0,0,0,0,2,1,1 . . . chr2 85645814 85645899 + USP39, chr2 85645788 85645930 h38_mk_AluJo - 17 SRR1084649,SRR1099499,SRR1314163,SRR1340508,SRR1341763,SRR1356619,SRR1386708,SRR1387809,SRR1399779,SRR1402900,SRR1414897,SRR1444622,SRR1468514,SRR1487685,SRR595926,SRR657635,SRR657777, 74 0,0,2,2,0,3,0,2,0,2,0,0,0,4,6,1,7,2,3,0,2,0,13,2,1,3,0,0,2,6,7,4,3,1,0,6,0,0,0,3,3,4,0,1,7,10,0,0,2,3,0,1,0,0,0,2,4,0,3,2,2,4,1,2,4,1,3,2,0,6,0,1,2,0,0,1,2,4,3,1,0,5,0,0,2,9,4,0,4,1,3,0,0,9,0,2,3,0,0,0,0,0,3,0,6,1,1,11,0,12,4,3,1,3,2,3,0 26 0,0,2,0,0,2,0,6,0,3,0,0,1,0,0,0,0,0,0,0,0,0,5,0,6,0,0,0,0,0,3,0,0,3,0,0,0,0,0,6,0,2,1,0,8,4,0,2,0,4,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,4,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,1,0,0,8,0,0,0,0,0,0,0,0,0,0,1,0,0,5,3,1,0,0,0,0,0,0,0,0,0,0 118 0.034082 1 chr2 96241877 96242141 + STARD7-AS1, chr2 96241692 96242002 h38_mk_AluJ - 7 SRR1084842,SRR1315970,SRR1320115,SRR1453851,SRR1498550,SRR657754,SRR662534, 102 2,0,3,5,0,3,2,0,3,8,3,2,5,5,4,4,0,3,0,1,2,5,16,5,2,4,3,2,0,0,1,2,1,5,3,2,4,4,1,8,0,4,7,4,5,2,3,3,2,0,1,3,1,2,2,6,3,2,4,4,1,3,2,3,3,2,2,0,2,0,5,4,8,2,3,2,3,6,0,3,1,4,3,5,2,3,2,1,5,1,1,1,2,6,0,3,7,2,2,3,0,0,2,4,4,9,3,9,5,12,5,6,1,3,1,1,3 9 0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0 104 0.964384 0 chr2 97671331 97671499 + LINC01125, chr2 97671219 97671456 h38_mk_AluJ - 2 SRR1399779,SRR1416477, 15 0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,0 45 0,2,2,0,0,1,1,1,0,1,2,0,0,0,1,0,3,2,0,0,0,0,1,0,0,0,1,1,0,0,1,1,0,0,2,1,0,0,0,1,1,0,0,0,6,0,0,0,0,1,0,4,0,0,0,0,0,0,1,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,3,1,1,0,0,4,1,0,0,0,1,0,0,0,1,0,1,0,0,0,0,1,0,3,0,1,0,0,2,0,4,0,1,5,1,1,0,2,2,0,1 . . . chr2 99156301 99156426 + AC092587.1,LIPT1, chr2 99156277 99156573 h38_mk_AluSx1 - 65 SRR1085495,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1341365,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387809,SRR1389979,SRR1408368,SRR1415234,SRR1432123,SRR1434526,SRR1435020,SRR1435775,SRR1440986,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR657777,SRR661349,SRR661973,SRR662534,SRR814967,SRR818210,SRR1340508,SRR1341763,SRR1387264,SRR1402900,SRR1455925,SRR818033, 106 2,0,3,2,2,2,0,0,2,5,3,4,4,2,7,3,6,2,0,1,7,1,3,3,4,1,2,3,2,6,4,1,2,3,3,1,4,1,2,5,3,1,2,1,5,7,4,4,1,0,1,2,1,1,3,4,5,3,4,6,3,2,0,4,3,1,1,0,6,1,4,2,6,1,0,6,2,1,0,1,4,0,1,5,2,12,4,1,9,0,3,2,1,3,8,4,2,2,1,3,1,1,5,8,6,3,4,6,4,9,3,4,6,10,9,4,1 102 1,1,0,1,1,1,0,1,2,1,2,2,1,2,3,1,3,2,5,1,2,1,6,2,4,4,3,1,4,3,4,1,1,3,1,1,3,2,2,1,4,3,4,0,0,3,0,4,1,0,2,1,2,3,1,0,2,1,2,2,6,1,0,0,5,3,3,1,6,2,3,3,3,4,0,1,4,2,1,2,0,2,1,2,3,2,3,1,2,0,2,1,2,3,2,2,5,0,3,4,3,7,4,0,2,3,4,8,1,3,3,2,0,8,5,3,1 106 0.930091 0 chr3 10010171 10010402 - AC022007.1, chr3 10010141 10010429 h38_mk_AluY + 1 SRR1315970, 69 1,1,0,1,1,1,2,0,1,0,1,1,1,0,0,0,2,1,5,0,1,0,3,2,0,0,1,1,0,0,2,0,1,1,0,0,0,1,0,2,0,3,0,1,0,1,0,1,1,1,1,1,2,1,0,0,1,0,0,0,1,1,4,0,3,1,0,0,3,2,0,1,3,2,1,1,1,1,1,1,0,0,0,3,0,0,1,0,1,0,1,0,2,0,1,3,0,2,1,1,0,1,0,0,0,3,0,1,1,0,1,1,0,2,2,0,1 20 0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,1,1,1,0,0,0 77 0.956710 0 chr3 101782660 101782780 + CEP97,NXPE3, chr3 101782613 101782957 h38_mk_AluJb - 108 SRR602314,SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 30,11,10,22,12,10,18,3,6,10,11,10,4,7,7,9,20,6,4,2,12,5,36,11,5,6,13,7,10,1,3,4,19,5,2,6,7,9,3,4,9,12,11,11,4,2,9,8,8,4,20,6,0,3,12,10,3,12,12,6,20,11,1,6,4,4,4,12,11,2,16,2,12,4,7,12,11,1,2,14,7,11,1,19,23,12,7,0,17,2,10,1,9,16,8,25,19,5,6,10,5,4,12,12,14,14,9,3,22,38,18,19,2,27,13,21,6 115 16,16,9,28,17,9,13,5,8,12,9,4,5,4,14,13,15,15,10,3,8,3,30,8,8,17,14,7,10,4,5,2,5,7,8,7,9,12,3,7,18,7,7,16,6,5,12,4,13,2,15,7,3,4,9,5,13,14,10,3,16,7,1,15,5,2,3,9,25,7,5,2,10,6,3,15,14,4,5,26,3,5,1,8,16,11,10,0,16,10,6,3,6,24,20,20,20,6,9,12,3,8,21,9,13,15,6,15,23,35,19,12,0,32,37,28,19 . . . chr3 106750813 106750905 - LINC00882, chr3 106750781 106751118 h38_mk_AluJb + 4 SRR1102055,SRR1340508,SRR602516,SRR818210, 30 0,0,0,6,0,0,5,0,0,1,3,0,0,0,0,1,0,0,0,0,1,0,2,0,0,0,1,0,3,0,0,0,0,1,0,0,0,0,1,1,0,0,2,0,3,0,0,0,0,0,0,2,0,0,0,0,1,1,1,0,0,0,0,0,1,1,0,0,1,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,4,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,0,0,8,0,3,0 32 0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,2,0,1,4,0,6,4,1,0,2,0,2,0,0,0,2,3,0,9,0,0,0,0,1,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,2,0,0,0,0,4,0,0,0,0,1,0,2,0,2,2,0,0,0,0,0,1,0,0,3,4,0,0,0,4,6,0,0,0,10,3,0 . . . chr3 107460673 107460790 + LINC01990, chr3 107460627 107460937 h38_mk_AluSz - 15 SRR1333741,SRR1340508,SRR1341365,SRR1341763,SRR1357478,SRR1360563,SRR1390601,SRR1416477,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1439873,SRR1440986,SRR1454803, 40 0,0,0,0,0,0,0,0,0,0,1,1,0,0,1,1,0,1,0,0,0,1,2,1,2,0,0,0,0,0,0,2,0,1,0,1,0,1,0,1,0,1,0,2,0,0,2,0,0,0,0,1,0,0,0,1,0,1,2,1,0,2,3,3,2,0,0,0,0,0,0,2,0,1,0,2,0,0,0,1,1,0,0,0,0,0,0,1,1,0,0,0,0,2,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,4,0,6,0,1,0,0 98 1,3,0,3,3,3,5,1,6,0,3,6,3,4,3,1,1,4,0,2,2,1,8,4,3,2,2,1,0,0,0,7,1,6,0,8,7,1,1,5,6,5,0,3,2,2,4,2,3,4,1,4,0,3,0,0,3,3,5,5,3,1,1,6,5,1,3,0,0,1,1,10,2,1,3,2,9,1,0,4,1,4,2,6,0,5,1,1,0,1,3,1,8,4,5,3,2,3,0,6,2,2,1,0,6,2,3,0,6,4,1,5,4,4,2,4,2 102 0.949213 0 chr3 11810776 11810897 - TAMM41, chr3 11810772 11811097 h38_mk_AluJb + 5 SRR1084842,SRR1102055,SRR1341763,SRR1418127,SRR1442571, 36 1,0,0,1,2,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,1,4,3,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,3,0,1,2,0,0,1,0,3,0,0,2,0,0,1,1,0,0,0,0,0,0,0,1,0,0,2,0,2,1,0,0,0,1,0,2,2,0,2,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,2,1,0,0,0,0,0 15 0,0,0,1,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,1,0,2,0,1,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.025931 1 chr3 11830722 11830874 - TAMM41, chr3 11830583 11830906 h38_mk_AluJb + 1 SRR595926, 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 30 1,0,1,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,1,0,2,0,0,1,1,0,1,0,0,0,0,1,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,0,1,0,0,1,0,1,0,0,2,0,0,0,2,2,0,1,0,0,0,0,0,0,0,1,0,1,1,0,0,1,0,0 101 0.123962 0 chr3 124731506 124731604 + UMPS, chr3 124731475 124731616 h38_mk_AluJ - 2 SRR1341763,SRR1457503, 23 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,1,0,1,0,1,0,1,0,0,0,1,0,1,1,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,0 25 0,0,0,1,2,0,0,1,1,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,3,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,1,0,0,1,0,3,0,1,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 116 0.064046 0 chr3 128867814 128867926 - AC112484.2, chr3 128867827 128867972 h38_mk_AluJb + 2 SRR1367943,SRR818210, 46 4,0,0,0,0,2,1,0,0,0,2,2,1,0,1,0,3,1,1,0,2,0,1,0,0,0,0,0,0,2,0,1,0,0,0,5,0,0,1,1,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,0,1,0,4,0,0,0,0,2,0,3,0,1,3,3,0,1,1,1,4,2,0,0,0,0,0,2,1,0,0,1,0,3,0,2,0,2,0,2,2,2,1,0,2,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,4,0 9 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,5,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 . . . chr3 129092500 129092593 - RAB43, chr3 129092471 129092610 h38_mk_AluJ + 4 SRR1337412,SRR1341763,SRR1360563,SRR613627, 27 1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,1,2,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,2,1,0,0,0,0,1,0,1,4,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,2,2,0 36 0,0,0,0,0,1,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,4,3,0,2,0,0,1,1,0,2,1,2,2,0,2,1,0,0,1,0,0,0,1,0,1,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,1,1,0,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,4,0,1,1,1,0,0,0,2,0 118 0.036314 1 chr3 13332293 13332613 - NUP210, chr3 13332569 13332697 h38_mk_AluJb + 1 SRR818033, 114 5,1,14,28,10,11,11,2,10,9,14,7,8,12,20,11,16,11,5,11,15,8,37,9,9,5,14,7,13,9,22,7,3,6,7,6,5,7,2,12,12,16,12,10,10,13,15,8,10,12,3,9,2,13,8,3,15,3,15,12,4,6,3,7,15,14,6,8,10,10,9,1,17,0,5,10,15,8,4,17,9,9,8,6,18,8,12,3,5,7,10,2,9,15,14,18,16,11,18,17,0,31,11,0,26,12,8,8,27,46,24,13,2,21,12,24,6 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 . . . chr3 138327031 138327128 - NME9, chr3 138326850 138327186 h38_mk_AluSz + 2 SRR1340508,SRR1476571, 37 0,0,0,0,1,0,0,0,1,0,3,0,1,0,2,0,0,1,0,0,0,0,2,0,0,0,0,2,1,2,0,3,0,0,1,1,1,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,0,1,1,0,0,0,0,0,1,1,0,0,0,0,1,1,0,0,0,0,3,2,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,4,1,0,1,0,1,1 17 0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,2,2,0,0,1,0,0,0,1,0,0,0,0,0,2,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,2 109 0.091107 0 chr3 142184711 142184814 - GK5, chr3 142184561 142184857 h38_mk_AluSq2 + 1 SRR1361567, 111 6,2,2,14,2,16,10,5,7,5,13,3,8,6,12,7,3,11,0,1,6,4,11,7,10,2,8,6,12,0,10,5,3,2,2,3,0,1,2,9,8,14,6,15,1,4,6,1,9,3,13,19,4,7,13,8,14,8,8,2,1,2,1,3,6,2,0,2,7,10,8,2,13,6,1,12,15,6,1,15,9,11,5,5,4,17,2,3,1,3,4,2,6,14,8,7,12,1,1,13,0,5,10,11,7,12,4,4,9,19,15,20,0,18,4,21,5 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr3 155805597 155805723 - C3orf33, chr3 155805466 155805763 h38_mk_AluJ + 17 SRR1102055,SRR1314163,SRR1333741,SRR1341763,SRR1348159,SRR1368772,SRR1390601,SRR1439873,SRR1468514,SRR1487194,SRR1498550,SRR600361,SRR604262,SRR607337,SRR613627,SRR662534,SRR818033, 54 1,0,0,3,1,0,3,1,0,4,0,1,0,1,0,1,2,2,1,0,0,1,0,0,1,1,1,0,1,0,0,0,0,0,1,1,1,0,0,2,1,2,0,3,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,1,1,0,4,0,0,1,0,0,1,1,0,0,1,0,2,3,1,1,0,0,1,1,0,3,0,0,0,1,0,0,0,3,0,0,0,0,3,1,2,0,4,0,0,0,0,0,0,0,1,0,4,0,3,1,5,1 55 0,0,0,1,1,0,2,1,0,0,2,1,0,4,1,0,0,2,0,1,1,4,0,2,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,1,1,1,0,1,2,0,0,0,1,0,0,2,1,1,1,0,0,0,2,0,1,0,0,0,2,1,0,1,2,1,1,1,0,1,0,1,0,0,0,0,1,2,0,0,0,2,1,1,0,4,0,0,1,3,2,0,4,0,1,0,0,0,6,0,0,0,0,0,1,0,1,1,0,1 113 0.227548 0 chr3 158825178 158825259 + MFSD1, chr3 158825160 158825442 h38_mk_AluJ4 - 5 SRR1084842,SRR1337412,SRR1357478,SRR604262,SRR657635, 96 2,3,4,6,1,5,0,0,2,2,2,2,2,1,1,1,8,8,2,1,7,2,8,3,0,0,4,2,6,4,1,7,2,1,3,0,0,4,0,2,3,5,4,4,6,3,7,1,2,2,3,3,1,5,2,2,3,0,4,1,1,1,2,6,4,0,4,4,5,5,3,0,0,2,0,5,7,2,0,2,3,0,2,0,3,3,3,0,1,2,4,1,0,0,3,1,4,3,0,3,0,1,4,0,5,5,1,16,7,11,10,5,9,9,5,4,5 9 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,1,0,0,0 118 0.058283 1 chr3 158825178 158825301 + AC080013.1,GFM1,MFSD1, chr3 158825160 158825442 h38_mk_AluJ4 - 56 SRR1072367,SRR1315970,SRR1317344,SRR1331579,SRR1333741,SRR1337098,SRR1341365,SRR1348159,SRR1354446,SRR1356444,SRR1360563,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1432123,SRR1434526,SRR1437538,SRR1439873,SRR1440986,SRR1447693,SRR1453341,SRR1453851,SRR1464373,SRR1468955,SRR1487362,SRR1487685,SRR1500868,SRR602516,SRR602704,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR821602,SRR1421177,SRR1468514,SRR657777,SRR818210,SRR1471943, 96 2,3,4,6,1,5,0,0,2,2,2,2,2,1,1,1,8,8,2,1,7,2,8,3,0,0,4,2,6,4,1,7,2,1,3,0,0,4,0,2,3,5,4,4,6,3,7,1,2,2,3,3,1,5,2,2,3,0,4,1,1,1,2,6,4,0,4,4,5,5,3,0,0,2,0,5,7,2,0,2,3,0,2,0,3,3,3,0,1,2,4,1,0,0,3,1,4,3,0,3,0,1,4,0,5,5,1,16,7,11,10,5,9,9,5,4,5 95 3,2,0,0,1,7,5,1,2,1,2,1,3,0,6,3,3,2,0,0,2,0,6,2,1,1,2,1,2,4,4,0,0,3,3,1,1,2,2,8,5,2,5,1,2,2,1,1,3,1,0,2,1,2,1,4,4,0,1,0,0,1,6,3,3,1,1,0,2,6,2,1,0,1,0,5,7,1,1,2,2,1,1,4,0,4,6,0,2,2,1,1,0,0,0,2,5,2,1,3,0,1,4,0,2,13,7,23,2,12,7,3,5,2,3,4,9 118 0.096871 1 chr3 161089944 161090062 - B3GALNT1, chr3 161089777 161090095 h38_mk_AluSx + 100 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 109 7,1,6,53,12,18,44,1,14,4,20,12,13,5,29,31,3,29,2,2,33,4,76,12,16,11,15,3,23,5,19,9,3,14,11,20,18,23,0,12,28,10,28,35,6,9,19,2,3,12,3,22,1,2,8,9,26,2,16,19,14,7,3,22,14,2,0,6,17,8,21,4,40,14,2,31,19,7,0,31,18,15,0,20,15,14,10,0,2,2,24,0,10,26,10,22,44,1,4,4,3,13,11,0,32,29,2,12,31,29,48,39,4,52,11,49,0 112 3,1,3,72,16,14,43,2,11,5,31,15,7,6,29,25,4,24,2,2,24,2,81,19,22,10,28,4,38,2,14,7,2,13,9,29,27,18,2,14,21,13,27,36,10,7,28,4,5,13,0,18,4,6,8,6,17,1,13,20,11,6,3,16,15,2,2,6,9,13,21,3,64,15,1,32,38,10,0,51,11,20,0,14,27,13,6,1,2,4,33,2,7,30,10,33,55,0,3,9,2,13,11,0,20,24,6,12,56,68,32,54,5,48,26,61,1 118 0.503583 1 chr3 178277934 178278057 - AC109779.1, chr3 178278014 178278087 h38_mk_Alu + 2 SRR1340508,SRR818210, 10 0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,2,0 . . . chr3 179324950 179325322 + ZNF639, chr3 179325002 179325329 h38_mk_AluSp - 1 SRR1328895, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 18,6,7,24,17,22,18,13,17,29,12,16,14,8,25,17,21,21,10,14,12,12,46,25,28,8,26,10,24,8,17,17,17,17,10,17,30,20,8,9,18,21,20,13,11,18,13,15,12,9,14,20,11,8,17,14,16,5,19,19,24,14,7,20,14,10,6,14,11,11,19,10,52,13,9,20,24,10,13,22,20,22,9,18,24,17,15,1,18,12,27,5,9,22,16,18,19,13,13,24,1,16,10,33,43,27,15,20,30,49,30,26,20,34,32,42,4 118 0.958834 1 chr3 179325042 179325322 + ZNF639, chr3 179325002 179325329 h38_mk_AluSp - 83 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1331579,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1367943,SRR1368772,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 108 1,2,2,6,5,4,2,1,5,4,10,2,3,3,7,4,4,1,5,1,7,3,19,4,5,1,3,1,2,2,5,1,3,1,1,2,6,1,2,1,2,4,4,10,5,2,6,1,2,2,0,3,1,3,4,2,1,1,2,4,7,2,1,7,4,1,2,0,3,4,4,1,9,1,4,4,7,2,6,4,4,7,2,3,9,2,0,0,2,1,5,0,2,5,1,4,8,0,0,1,1,3,3,0,8,5,0,1,8,11,17,4,1,3,6,4,2 117 18,6,7,24,17,22,18,13,17,29,12,16,14,8,25,17,21,21,10,14,12,12,46,25,28,8,26,10,24,8,17,17,17,17,10,17,30,20,8,9,18,21,20,13,11,18,13,15,12,9,14,20,11,8,17,14,16,5,19,19,24,14,7,20,14,10,6,14,11,11,19,10,52,13,9,20,24,10,13,22,20,22,9,18,24,17,15,1,18,12,27,5,9,22,16,18,19,13,13,24,1,16,10,33,43,27,15,20,30,49,30,26,20,34,32,42,4 118 0.963965 1 chr3 179325067 179325322 + ZNF639, chr3 179325002 179325329 h38_mk_AluSp - 2 SRR1316940,SRR1415234, 2 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 18,6,7,24,17,22,18,13,17,29,12,16,14,8,25,17,21,21,10,14,12,12,46,25,28,8,26,10,24,8,17,17,17,17,10,17,30,20,8,9,18,21,20,13,11,18,13,15,12,9,14,20,11,8,17,14,16,5,19,19,24,14,7,20,14,10,6,14,11,11,19,10,52,13,9,20,24,10,13,22,20,22,9,18,24,17,15,1,18,12,27,5,9,22,16,18,19,13,13,24,1,16,10,33,43,27,15,20,30,49,30,26,20,34,32,42,4 . . . chr3 183452078 183452197 + LINC00888, chr3 183452050 183452364 h38_mk_AluSz6 - 1 SRR1333741, 117 28,8,22,76,60,44,63,18,31,27,64,21,26,21,62,37,34,56,12,14,57,11,132,39,62,38,52,28,57,17,27,26,27,41,15,51,60,39,12,27,44,21,19,63,23,39,60,12,12,33,11,40,14,16,24,28,40,7,45,42,32,28,15,77,47,23,13,18,24,28,35,32,73,29,13,44,50,18,18,51,32,32,6,49,55,50,15,7,15,13,59,4,19,42,23,92,55,18,29,28,6,32,25,20,49,27,11,8,46,59,88,59,4,70,43,77,13 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr3 183452078 183452351 + LINC00888, chr3 183452050 183452364 h38_mk_AluSz6 - 5 SRR1316940,SRR1320115,SRR1331579,SRR1356444,SRR1432123, 117 28,8,22,76,60,44,63,18,31,27,64,21,26,21,62,37,34,56,12,14,57,11,132,39,62,38,52,28,57,17,27,26,27,41,15,51,60,39,12,27,44,21,19,63,23,39,60,12,12,33,11,40,14,16,24,28,40,7,45,42,32,28,15,77,47,23,13,18,24,28,35,32,73,29,13,44,50,18,18,51,32,32,6,49,55,50,15,7,15,13,59,4,19,42,23,92,55,18,29,28,6,32,25,20,49,27,11,8,46,59,88,59,4,70,43,77,13 7 0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0 . . . chr3 194589021 194589142 + TMEM44-AS1, chr3 194588994 194589308 h38_mk_AluJo - 13 SRR1084842,SRR1085495,SRR1335446,SRR1357478,SRR1360563,SRR1386708,SRR1399779,SRR1413562,SRR1474777,SRR604262,SRR657754,SRR657777,SRR662233, 58 2,0,0,1,3,0,1,0,0,3,0,1,1,0,1,0,0,0,2,0,0,0,0,2,2,0,0,0,1,0,2,1,0,2,0,0,0,0,1,2,0,0,0,0,3,1,0,1,4,1,0,1,1,0,1,0,1,0,0,1,0,3,0,1,1,2,0,1,2,1,2,0,1,0,1,2,1,0,0,0,0,1,1,0,2,0,2,1,0,0,0,0,1,2,0,0,0,2,1,1,0,2,0,0,0,1,2,0,0,2,1,1,2,2,1,0,0 105 6,4,1,3,2,4,2,0,4,26,3,2,2,3,6,3,4,2,3,0,3,6,2,11,6,2,2,0,8,3,0,1,1,1,1,2,3,2,2,7,1,15,1,0,1,1,6,4,3,3,12,8,3,1,1,5,1,3,3,4,4,5,4,5,5,1,2,2,10,4,6,0,4,1,3,1,7,3,10,3,0,7,6,0,10,6,2,1,7,2,2,0,7,3,4,0,1,2,6,9,0,0,2,16,10,5,6,8,1,4,11,5,10,8,4,3,5 107 0.955070 0 chr3 194589025 194589142 + TMEM44-AS1, chr3 194588994 194589308 h38_mk_AluJo - 64 SRR1072367,SRR1077405,SRR1084649,SRR1099499,SRR1315970,SRR1316940,SRR1317344,SRR1331579,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1368772,SRR1381673,SRR1387809,SRR1402900,SRR1408208,SRR1414897,SRR1416477,SRR1416754,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1476571,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR607337,SRR614802,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 92 6,1,5,1,2,2,0,1,1,11,1,0,2,0,0,0,3,1,0,1,1,5,3,2,7,2,4,1,3,2,2,1,0,0,1,1,3,0,2,1,1,4,3,2,2,2,4,1,0,3,1,3,1,1,2,0,1,2,1,2,1,5,1,2,2,0,1,2,3,2,8,1,1,2,5,2,3,3,6,1,0,0,3,2,4,4,2,0,7,1,0,0,5,2,0,0,0,1,3,2,0,1,3,0,0,0,1,13,5,1,2,3,1,3,2,1,0 105 6,4,1,3,2,4,2,0,4,26,3,2,2,3,6,3,4,2,3,0,3,6,2,11,6,2,2,0,8,3,0,1,1,1,1,2,3,2,2,7,1,15,1,0,1,1,6,4,3,3,12,8,3,1,1,5,1,3,3,4,4,5,4,5,5,1,2,2,10,4,6,0,4,1,3,1,7,3,10,3,0,7,6,0,10,6,2,1,7,2,2,0,7,3,4,0,1,2,6,9,0,0,2,16,10,5,6,8,1,4,11,5,10,8,4,3,5 112 0.971382 0 chr3 194589025 194589322 + TMEM44-AS1, chr3 194588994 194589308 h38_mk_AluJo - 1 SRR1447693, 92 6,1,5,1,2,2,0,1,1,11,1,0,2,0,0,0,3,1,0,1,1,5,3,2,7,2,4,1,3,2,2,1,0,0,1,1,3,0,2,1,1,4,3,2,2,2,4,1,0,3,1,3,1,1,2,0,1,2,1,2,1,5,1,2,2,0,1,2,3,2,8,1,1,2,5,2,3,3,6,1,0,0,3,2,4,4,2,0,7,1,0,0,5,2,0,0,0,1,3,2,0,1,3,0,0,0,1,13,5,1,2,3,1,3,2,1,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr3 195928964 195929081 - AC124944.3, chr3 195928817 195929165 h38_mk_AluSx1 + 1 SRR607337, 42 0,0,2,2,0,0,0,1,0,0,0,0,2,1,0,0,4,0,0,0,0,2,2,1,3,3,1,0,2,1,1,0,0,0,0,0,0,0,1,1,0,0,1,4,0,0,2,1,0,0,0,0,0,0,2,0,1,3,1,0,0,0,0,0,3,1,0,0,0,0,0,1,0,0,0,0,3,2,0,0,0,0,1,2,4,0,0,0,4,0,0,0,0,1,0,2,1,1,0,2,0,0,0,0,0,0,0,1,0,0,0,2,0,0,2,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr3 196984745 196984884 - MELTF, chr3 196984757 196985048 h38_mk_AluSx1 + 3 SRR1416477,SRR1464373,SRR814967, 92 2,0,13,8,0,1,1,6,8,1,8,2,4,1,9,1,1,6,2,0,2,0,14,4,2,1,7,7,0,5,9,9,0,7,5,13,2,3,0,4,3,8,2,0,6,2,3,1,2,0,1,6,4,2,5,0,9,2,1,3,1,2,0,2,4,0,0,0,4,4,4,3,5,1,0,4,9,6,0,7,7,2,2,9,6,2,4,0,0,0,4,1,2,3,0,0,3,3,0,4,0,2,3,0,1,6,2,0,10,1,4,3,3,2,3,8,1 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0 98 0.886752 0 chr3 197579203 197579299 - AC132008.2,BDH1, chr3 197579036 197579365 h38_mk_AluSp + 46 SRR1077405,SRR1084842,SRR1315970,SRR1316940,SRR1317344,SRR1320115,SRR1326179,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1348360,SRR1356619,SRR1361567,SRR1367943,SRR1386708,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1413562,SRR1415234,SRR1433796,SRR1434526,SRR1435293,SRR1440986,SRR1447693,SRR1455925,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR601500,SRR602704,SRR604456,SRR614802,SRR657754,SRR661349,SRR662233,SRR662534,SRR814967,SRR818210,SRR1314163, 108 3,3,0,15,5,6,6,6,4,3,8,3,2,7,20,11,3,13,1,1,7,4,17,1,3,4,2,4,4,5,7,2,4,6,7,8,3,6,1,4,8,5,2,4,1,7,5,0,7,3,8,2,3,2,0,4,6,4,1,2,6,1,2,13,11,2,3,1,7,2,0,1,10,4,2,14,4,4,2,4,3,1,2,3,9,5,3,3,1,2,5,0,0,9,3,3,11,1,6,7,0,1,5,0,7,13,10,11,9,24,16,5,5,8,3,46,0 66 0,6,0,7,0,1,0,3,1,2,1,0,2,0,10,0,0,5,1,0,4,1,6,0,2,1,1,3,0,0,3,0,0,0,2,2,0,2,0,1,1,4,3,1,0,2,2,0,3,0,3,0,1,1,1,0,2,2,3,0,1,0,1,0,2,0,1,0,3,2,1,0,3,0,0,2,2,0,0,1,4,0,0,4,1,0,0,0,1,1,0,0,0,3,0,0,4,0,4,0,0,2,1,0,0,4,0,1,1,0,3,1,0,3,1,18,0 . . . chr3 23911329 23911450 - NKIRAS1, chr3 23911162 23911483 h38_mk_AluSx + 117 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 39,15,37,281,101,100,201,58,114,66,157,82,60,66,172,136,100,133,15,27,146,29,537,103,157,87,165,74,182,63,81,136,57,125,42,159,154,129,20,195,140,103,93,155,63,124,164,49,40,91,37,123,22,21,79,71,122,22,92,153,87,122,47,175,78,46,29,54,86,67,147,69,274,90,43,154,168,84,40,221,142,163,31,146,186,85,44,11,43,33,173,7,64,167,87,252,175,37,55,96,5,111,70,22,151,145,49,105,201,185,338,204,23,280,211,249,31 117 30,5,36,216,75,81,192,32,99,33,130,62,45,44,145,99,76,94,12,16,115,20,432,71,132,53,105,60,179,31,59,79,21,88,21,138,114,87,10,114,125,64,66,133,48,85,135,29,18,87,12,73,33,34,45,65,89,13,66,95,55,72,35,151,69,20,35,43,62,59,128,51,181,60,24,116,117,56,21,147,88,117,17,125,159,52,31,14,27,23,128,5,58,118,68,235,169,24,52,59,6,78,86,21,83,68,18,71,127,109,184,133,19,199,152,187,18 118 0.991772 1 chr3 44458244 44458364 - ZNF445, chr3 44458079 44458388 h38_mk_AluSc + 42 SRR1084842,SRR1099499,SRR1326179,SRR1328895,SRR1331579,SRR1337412,SRR1341365,SRR1354446,SRR1356619,SRR1357478,SRR1387264,SRR1387809,SRR1390601,SRR1402900,SRR1414897,SRR1415234,SRR1418127,SRR1418837,SRR1432123,SRR1434526,SRR1435293,SRR1444678,SRR1447693,SRR1453341,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR1500868,SRR601500,SRR602516,SRR602704,SRR604456,SRR614802,SRR657635,SRR662233,SRR814967,SRR818210, 106 4,1,4,14,0,7,1,2,0,6,10,1,3,2,12,7,9,8,4,2,7,9,17,7,5,4,6,0,5,2,10,8,2,4,3,5,1,5,2,4,7,7,2,7,4,6,2,2,2,7,6,5,1,4,3,2,4,1,9,4,3,0,0,14,7,3,3,2,9,3,3,3,7,2,6,7,8,7,2,9,3,3,0,7,8,2,5,0,8,1,2,2,6,14,4,9,11,0,4,11,1,6,4,0,6,14,0,0,6,6,11,4,2,8,5,7,7 81 3,1,0,4,1,4,1,0,1,3,0,0,0,1,4,1,6,2,1,2,1,2,3,3,2,0,1,0,2,0,5,2,0,0,3,0,0,1,0,1,2,4,0,2,1,4,0,1,0,1,3,1,2,5,4,1,4,0,4,0,4,0,0,1,1,1,0,1,2,1,1,1,1,1,3,3,6,1,2,5,0,0,0,3,4,0,2,0,2,2,0,0,4,4,2,3,5,1,3,2,0,0,3,0,4,0,0,0,0,2,4,1,0,5,1,4,1 112 0.909327 0 chr3 47041360 47041483 - SETD2, chr3 47041357 47041511 h38_mk_AluJ + 6 SRR1072367,SRR1356619,SRR1421177,SRR1432123,SRR599510,SRR662233, 13 3,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,3,2,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,2,0,0,0,0,0,0 75 2,2,3,0,1,2,1,0,4,7,1,0,1,1,0,0,2,0,3,0,0,0,6,1,1,3,3,0,4,0,3,0,1,0,2,0,1,2,0,0,4,5,1,0,2,1,1,0,0,1,3,2,0,1,1,2,5,0,1,1,0,0,2,1,1,3,1,0,3,2,1,1,3,0,1,2,1,0,0,4,0,1,0,2,0,1,1,2,0,0,0,2,1,0,1,0,5,2,1,0,0,0,0,0,4,4,0,2,2,7,2,4,9,1,4,0,2 118 0.034874 1 chr3 47238243 47238569 + KIF9-AS1, chr3 47238228 47238528 h38_mk_AluJ - 1 SRR1432123, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 61 3,0,0,1,2,1,0,0,0,0,2,0,0,2,0,6,0,0,0,1,2,0,0,1,0,0,4,0,0,2,1,2,0,2,0,1,1,1,1,0,0,4,0,4,1,0,1,0,1,1,1,0,1,0,1,0,1,0,1,1,1,0,2,0,1,1,0,0,1,1,1,0,0,1,0,0,5,0,0,1,0,3,0,3,0,2,1,0,1,0,1,1,1,1,0,6,0,0,7,6,0,1,0,0,3,0,0,4,2,0,0,2,0,3,2,2,0 . . . chr3 47238404 47238569 + KIF9-AS1, chr3 47238228 47238528 h38_mk_AluJ - 5 SRR1387809,SRR1474777,SRR602516,SRR657635,SRR818210, 39 0,0,3,1,1,0,1,0,1,0,0,0,0,0,1,0,0,1,0,0,2,0,0,0,2,1,0,1,1,0,0,0,0,1,0,1,0,0,0,1,0,1,0,1,0,1,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,1,2,1,0,0,2,2,2,0,0,0,1,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,1,0,0,1,2,0,0,0,1,0,1,0,0,0,1,0 61 3,0,0,1,2,1,0,0,0,0,2,0,0,2,0,6,0,0,0,1,2,0,0,1,0,0,4,0,0,2,1,2,0,2,0,1,1,1,1,0,0,4,0,4,1,0,1,0,1,1,1,0,1,0,1,0,1,0,1,1,1,0,2,0,1,1,0,0,1,1,1,0,0,1,0,0,5,0,0,1,0,3,0,3,0,2,1,0,1,0,1,1,1,1,0,6,0,0,7,6,0,1,0,0,3,0,0,4,2,0,0,2,0,3,2,2,0 . . . chr3 47239611 47239915 + KIF9, chr3 47239588 47239762 h38_mk_AluSz6 - 1 SRR661349, 15 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,6,1,0,0,0,0,2,0,0,0,1,0,0,0,0,0,1,2,0 18 0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,3,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,2,0,0,0 . . . chr3 48924718 48924839 + ARIH2, chr3 48924706 48925003 h38_mk_AluSc8 - 115 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 31,36,10,26,11,25,37,9,16,31,21,18,14,16,30,17,31,18,12,13,23,22,34,21,23,14,20,8,16,11,11,11,17,13,10,14,21,14,7,19,16,16,17,21,17,12,28,5,19,16,39,16,2,10,17,11,18,14,19,14,15,10,10,29,20,18,15,18,29,13,32,9,21,16,8,27,37,6,14,29,20,17,5,16,20,19,15,0,32,4,24,5,13,18,13,16,23,4,5,10,3,13,11,2,28,25,7,7,32,39,27,32,8,56,33,42,14 117 32,54,7,38,20,23,47,13,9,27,22,21,21,18,39,19,37,15,12,11,27,46,61,27,26,27,20,11,17,9,12,13,16,17,9,16,29,33,4,22,18,15,16,26,20,13,26,7,20,17,42,18,8,8,19,16,15,27,15,21,14,13,9,24,16,22,17,11,25,15,20,16,45,17,21,9,23,13,12,18,14,13,14,29,29,32,24,5,32,7,22,6,17,17,5,31,21,3,6,20,5,14,9,1,27,42,16,18,26,21,35,34,8,48,30,49,18 118 0.825888 1 chr3 49117947 49118120 - USP19, chr3 49117997 49118294 h38_mk_AluJ + 113 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 17,7,12,63,33,42,40,20,26,18,27,28,13,26,43,21,53,30,13,7,38,10,91,24,25,17,46,11,18,23,26,28,12,23,11,27,6,22,6,34,30,24,20,56,22,27,23,15,20,16,13,27,13,5,14,20,36,9,26,30,13,11,2,43,35,19,5,11,11,22,25,14,42,21,14,45,36,25,9,57,24,23,8,36,40,15,25,2,22,19,34,8,25,28,27,37,57,12,12,21,3,19,26,0,56,30,9,6,45,61,68,19,12,56,36,59,11 117 13,4,9,52,31,22,32,16,20,16,23,11,11,12,25,26,26,19,9,5,28,15,93,26,31,20,22,9,14,20,17,18,11,16,11,22,16,20,6,24,30,21,26,39,17,25,16,15,16,14,17,19,9,3,14,12,21,11,28,19,24,8,3,25,21,21,7,15,13,13,28,13,35,19,8,34,37,14,4,28,29,21,12,31,26,14,16,1,13,16,25,3,24,24,29,45,45,14,7,17,1,25,9,2,38,19,20,15,27,65,48,29,1,66,32,56,12 . . . chr3 49117985 49118120 - USP19, chr3 49117997 49118294 h38_mk_AluJ + 1 SRR612563, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 13,4,9,52,31,22,32,16,20,16,23,11,11,12,25,26,26,19,9,5,28,15,93,26,31,20,22,9,14,20,17,18,11,16,11,22,16,20,6,24,30,21,26,39,17,25,16,15,16,14,17,19,9,3,14,12,21,11,28,19,24,8,3,25,21,21,7,15,13,13,28,13,35,19,8,34,37,14,4,28,29,21,12,31,26,14,16,1,13,16,25,3,24,24,29,45,45,14,7,17,1,25,9,2,38,19,20,15,27,65,48,29,1,66,32,56,12 . . . chr3 49488626 49488745 + DAG1, chr3 49488591 49488884 h38_mk_AluSx3 - 17 SRR1084649,SRR1084842,SRR1085495,SRR1320115,SRR1331579,SRR1340508,SRR1348159,SRR1390601,SRR1418127,SRR1464373,SRR1468514,SRR602516,SRR602704,SRR604262,SRR607337,SRR613627,SRR818033, 61 0,0,3,2,2,1,0,2,1,0,0,0,3,2,2,0,2,0,0,0,2,0,5,0,0,1,1,1,0,0,2,1,0,0,0,2,0,1,0,0,0,3,1,2,1,0,1,0,1,0,0,0,0,3,2,0,1,0,1,4,1,0,0,1,0,3,2,2,1,0,1,0,1,2,3,6,1,0,0,0,0,0,0,1,3,1,4,0,0,1,2,0,1,0,0,2,1,1,3,1,0,5,0,0,0,2,0,0,0,0,1,2,1,0,6,1,0 69 0,0,4,3,1,2,2,4,0,0,2,1,3,2,1,1,6,2,0,2,0,2,4,0,1,1,3,1,0,0,1,0,0,0,1,1,1,0,1,0,2,0,1,2,0,2,0,1,0,1,1,0,0,1,1,0,1,1,1,0,1,0,0,3,0,0,0,2,2,0,4,0,0,3,5,4,2,2,0,0,1,0,3,2,2,0,1,1,2,1,1,0,1,0,4,6,5,2,3,2,0,4,0,0,3,0,0,0,0,3,0,0,0,1,3,0,0 81 0.955007 0 chr3 49488698 49488745 + DAG1, chr3 49488591 49488884 h38_mk_AluSx3 - 2 SRR1500868,SRR602314, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 69 0,0,4,3,1,2,2,4,0,0,2,1,3,2,1,1,6,2,0,2,0,2,4,0,1,1,3,1,0,0,1,0,0,0,1,1,1,0,1,0,2,0,1,2,0,2,0,1,0,1,1,0,0,1,1,0,1,1,1,0,1,0,0,3,0,0,0,2,2,0,4,0,0,3,5,4,2,2,0,0,1,0,3,2,2,0,1,1,2,1,1,0,1,0,4,6,5,2,3,2,0,4,0,0,3,0,0,0,0,3,0,0,0,1,3,0,0 . . . chr3 50309659 50309777 - HYAL1, chr3 50309679 50309795 h38_mk_AluSx + 1 SRR600361, 33 0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,1,2,0,1,0,1,0,1,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,2,1,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,1,2,1,0,0,1,0,0,0,1,0,1,0,0,0,0,1,0,0,1,0,3,0,0,1,0,1,0,1,4 30 0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,2,0,1,0,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,1,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,3,1,1,0,1,0,1,1,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0 . . . chr3 52749692 52749829 - NEK4, chr3 52749542 52749867 h38_mk_AluSz + 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 14,6,10,33,24,21,19,14,20,31,15,5,10,22,24,9,29,14,8,6,21,8,44,9,15,10,26,12,20,14,11,13,10,10,12,28,26,19,10,18,20,18,17,27,12,19,14,9,16,4,4,5,10,3,14,15,8,5,16,15,28,9,7,13,14,16,9,15,4,11,13,9,19,24,11,23,14,10,6,18,23,17,10,29,25,12,15,4,21,17,18,3,15,18,15,23,21,10,24,20,1,26,9,0,29,15,4,11,25,31,9,36,1,38,36,24,12 117 10,9,15,24,18,11,22,15,17,24,21,17,16,6,14,10,33,17,8,8,17,6,61,13,9,9,21,12,15,13,17,8,8,10,12,22,20,24,5,13,28,15,9,25,16,12,19,9,15,11,8,14,10,6,12,14,17,9,12,16,15,16,3,13,13,9,22,10,10,10,21,10,23,24,11,14,32,7,9,14,18,16,14,29,22,17,15,4,34,13,26,5,9,17,17,32,29,10,21,17,4,19,11,2,24,18,15,10,19,40,26,34,5,24,33,22,9 118 0.840477 1 chr3 53173493 53173608 + PRKCD, chr3 53173461 53173789 h38_mk_AluSx1 - 37 SRR1314163,SRR1316940,SRR1317344,SRR1337098,SRR1340508,SRR1341763,SRR1361567,SRR1367943,SRR1375571,SRR1399779,SRR1402900,SRR1408208,SRR1414897,SRR1416477,SRR1418127,SRR1432123,SRR1435020,SRR1440986,SRR1447693,SRR1453851,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1500868,SRR601500,SRR602516,SRR607337,SRR613627,SRR657635,SRR662534,SRR814967,SRR818033, 52 1,0,0,0,0,0,1,6,0,1,3,0,0,0,0,0,0,0,0,0,3,0,20,2,1,0,0,0,0,1,0,1,0,0,1,3,1,5,0,0,0,0,0,0,2,2,3,0,0,2,1,2,0,2,1,0,2,0,0,1,0,0,0,0,7,0,0,0,4,1,5,2,6,0,0,1,4,1,0,1,2,1,1,7,2,2,0,0,0,1,0,0,0,1,0,3,0,0,0,1,0,4,0,0,4,3,1,0,0,0,0,5,0,5,1,0,0 84 1,0,0,1,0,0,2,16,0,3,10,0,3,1,1,5,2,2,6,0,12,0,53,2,4,1,3,1,0,3,1,5,7,1,2,12,11,9,0,1,0,6,0,2,2,6,10,0,1,8,4,1,1,3,2,0,10,0,1,4,3,0,1,2,20,3,0,0,9,1,7,4,10,0,0,7,11,4,0,7,3,0,0,12,10,14,0,0,0,2,1,0,0,4,0,7,1,2,0,11,0,7,1,0,4,1,3,1,1,3,1,28,0,10,2,2,7 100 0.541690 0 chr3 56598190 56598300 + CCDC66, chr3 56598179 56598343 h38_mk_AluSz6 - 1 SRR613627, 18 0,0,0,0,2,2,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,5,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,2,0,0,1,0,3,0,0,0,0,0,3,0,1,0,0,0,0,0,0,3,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.018641 1 chr3 58315722 58315819 + HTD2,RPP14, chr3 58315656 58315985 h38_mk_AluSp - 4 SRR1317344,SRR1368772,SRR1402900,SRR1084842, 35 0,0,0,2,0,0,0,0,0,0,2,0,0,1,0,0,0,0,1,0,2,0,3,1,0,0,0,1,1,0,0,0,1,0,0,0,3,0,0,1,0,1,0,1,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,2,0,1,0,0,0,0,1,0,0,1,0,1,1,0,0,1,0,1,0,2,0,1,0,1,1,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0 77 1,1,5,6,1,6,0,2,0,1,3,1,0,3,3,0,3,1,0,0,0,2,9,1,0,3,0,2,1,0,0,2,2,0,0,1,6,2,1,2,2,4,3,2,0,2,1,1,2,1,1,0,0,1,0,2,1,1,0,1,1,0,0,3,2,0,2,0,0,1,0,0,4,1,1,1,2,2,0,1,2,1,0,0,1,4,2,0,2,2,0,0,3,1,1,1,5,2,0,1,0,2,1,0,3,4,5,0,4,0,0,5,0,4,0,6,0 118 0.067064 1 chr3 93996548 93996684 + ARL13B, chr3 93996543 93996687 h38_mk_AluJ - 12 SRR1326179,SRR1399779,SRR1413562,SRR1435020,SRR1474553,SRR1485459,SRR1487362,SRR1487685,SRR1500868,SRR602704,SRR657754,SRR814967, 42 1,1,0,0,2,0,0,0,0,2,0,0,1,1,1,0,0,0,0,0,1,0,2,0,3,1,0,0,0,0,1,0,1,1,0,0,1,0,0,0,1,0,1,0,2,1,0,0,2,0,0,2,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,1,1,0,0,0,1,0,0,3,0,2,1,0,1,1,2,0,0,1,0,0,1,1,0,0,0,0,0,0,0,1,0,0,2,1,0,0,0,2,0,0,3 71 0,0,2,2,0,1,1,2,1,1,3,0,1,1,6,1,4,0,1,0,1,1,2,5,0,0,0,0,1,0,0,0,1,1,0,0,0,1,0,0,0,4,0,2,1,0,1,2,1,1,4,0,2,1,3,1,0,0,0,1,2,1,0,1,0,1,1,0,1,0,1,0,2,1,0,1,3,0,0,1,1,0,2,2,1,1,2,0,3,2,2,1,0,1,0,1,2,0,0,1,0,1,1,0,1,6,0,5,1,4,0,2,0,3,1,0,0 107 0.449504 0 chr3 93996563 93996684 + ARL13B, chr3 93996543 93996687 h38_mk_AluJ - 23 SRR1326179,SRR1331579,SRR1341365,SRR1360128,SRR1387809,SRR1399779,SRR1408208,SRR1415234,SRR1418127,SRR1439873,SRR1455925,SRR1468514,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR602516,SRR602704,SRR614802,SRR657754,SRR662534,SRR814967, 51 0,0,0,1,0,0,1,1,1,0,0,1,1,0,1,0,1,0,2,0,0,0,0,1,0,1,0,0,0,1,1,1,3,0,0,1,0,0,1,0,2,2,2,0,1,1,1,0,0,2,1,0,0,3,1,2,0,0,1,0,0,0,0,2,1,0,0,1,1,0,0,0,2,0,0,0,2,0,0,0,2,0,0,1,2,4,2,0,1,0,0,1,0,0,0,1,2,0,0,1,0,0,2,0,0,2,0,0,0,0,0,4,0,2,1,2,0 71 0,0,2,2,0,1,1,2,1,1,3,0,1,1,6,1,4,0,1,0,1,1,2,5,0,0,0,0,1,0,0,0,1,1,0,0,0,1,0,0,0,4,0,2,1,0,1,2,1,1,4,0,2,1,3,1,0,0,0,1,2,1,0,1,0,1,1,0,1,0,1,0,2,1,0,1,3,0,0,1,1,0,2,2,1,1,2,0,3,2,2,1,0,1,0,1,2,0,0,1,0,1,1,0,1,6,0,5,1,4,0,2,0,3,1,0,0 107 0.467591 0 chr3 9818555 9818920 + ARPC4,TTLL3, chr3 9818362 9818677 h38_mk_AluY - 27 SRR1316940,SRR1381673,SRR1413562,SRR1415234,SRR1457482,SRR1487362,SRR599510,SRR1317344,SRR1318163,SRR1320963,SRR1331579,SRR1348159,SRR1375571,SRR1390601,SRR1408368,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1453341,SRR1454803,SRR1464373,SRR1474777,SRR600361,SRR602704,SRR663633,SRR818033, 95 0,0,1,5,5,5,5,0,3,6,2,3,1,4,2,0,2,3,0,0,0,0,8,0,1,1,8,1,1,1,1,5,0,1,0,2,0,1,2,1,1,5,1,2,3,3,4,2,4,1,5,1,1,2,0,3,3,0,4,1,1,3,3,0,1,2,5,1,3,4,1,4,1,8,1,2,1,1,1,3,1,8,3,0,2,2,4,1,4,2,0,2,2,4,0,2,5,0,0,4,0,1,3,14,2,3,1,4,0,1,4,5,4,4,3,3,2 117 29,12,24,42,16,33,46,36,29,50,21,23,19,32,47,26,21,39,8,20,35,40,71,23,27,18,48,10,19,40,28,55,6,24,24,19,37,34,19,62,35,49,31,54,39,27,44,26,38,43,28,37,27,19,38,38,42,19,28,29,23,15,22,46,50,27,21,15,27,37,44,23,36,49,16,25,52,32,10,29,23,30,14,27,41,33,29,20,20,28,42,11,23,33,37,32,39,14,17,36,7,21,19,11,60,70,22,51,26,60,46,45,37,61,43,47,21 118 0.937487 1 chr3 9948355 9948469 + CRELD1,IL17RC,PRRT3-AS1, chr3 9948320 9948517 h38_mk_AluJb - 31 SRR1326179,SRR1331579,SRR1348360,SRR1413562,SRR1434526,SRR1437538,SRR602516,SRR607337,SRR1314163,SRR1356444,SRR1432123,SRR1072367,SRR1084649,SRR1315970,SRR1316940,SRR1318163,SRR1333741,SRR1336548,SRR1337412,SRR1387264,SRR1408368,SRR1415234,SRR1433796,SRR1476571,SRR1498550,SRR602704,SRR604262,SRR604456,SRR657127,SRR818033,SRR821602, 104 8,6,6,1,4,1,4,8,4,3,3,2,6,2,5,1,10,4,2,2,2,4,7,5,1,4,3,4,3,3,3,6,5,5,0,1,0,1,3,1,4,1,1,6,4,3,2,4,6,0,7,1,5,2,1,0,5,4,3,3,2,0,10,4,4,0,3,0,5,2,2,7,1,4,3,1,2,1,3,2,1,4,1,11,3,7,3,1,7,2,5,3,2,3,2,4,3,7,6,6,0,4,0,4,0,2,1,0,2,10,0,0,2,5,2,3,4 91 6,2,5,1,0,0,0,7,3,4,0,3,2,0,3,0,8,3,0,3,0,7,1,1,2,2,2,4,1,3,2,2,1,2,0,2,1,1,4,2,4,2,0,2,0,1,2,4,5,0,7,0,2,1,0,0,3,4,3,2,1,1,6,2,0,1,2,1,1,1,2,2,2,2,1,2,2,0,2,1,0,2,4,1,7,1,2,2,8,2,2,2,2,2,1,6,3,15,7,4,2,2,2,17,0,1,0,2,0,0,0,0,0,0,4,2,3 . . . chr4 102912008 102912129 - SLC9B1, chr4 102911843 102912161 h38_mk_AluSz + 7 SRR1337412,SRR1421177,SRR1474777,SRR1487362,SRR1488651,SRR604262,SRR657777, 57 2,4,0,2,0,1,0,1,1,0,0,0,0,3,1,0,2,0,1,0,0,2,1,1,2,1,0,0,0,2,0,0,0,0,1,0,1,1,0,1,0,2,0,0,0,2,0,2,2,0,2,0,0,0,3,2,0,2,2,0,1,0,0,1,0,1,2,2,0,2,1,0,0,0,1,0,1,0,1,0,1,1,1,1,1,2,1,2,1,1,0,0,0,0,0,0,1,2,1,1,0,0,0,0,0,1,2,0,0,3,0,0,0,0,0,2,0 45 1,3,0,0,0,1,0,0,2,0,0,0,0,1,0,0,0,1,0,0,0,1,1,0,1,1,0,0,0,0,1,1,0,0,1,0,0,1,1,0,1,1,0,2,1,0,1,0,1,0,1,1,0,0,1,2,0,1,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,1,1,1,0,0,0,0,3,0,0,0,2,1,1,1,0,1,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,2,0,0,6,0,3,0,1,3,0,3 97 0.536402 0 chr4 108663233 108663306 + OSTC, chr4 108663200 108663512 h38_mk_AluY - 7 SRR1375571,SRR1399779,SRR1408208,SRR1454803,SRR1457482,SRR1498550,SRR600361, 35 1,0,1,0,0,0,0,0,1,0,1,0,1,0,0,0,2,0,0,0,0,2,1,0,1,0,1,0,0,0,0,1,0,0,1,0,0,1,1,0,1,0,0,1,1,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,2,0,0,0,2,0,0,0,1,0,0,2,0,0,1,0,0,0,0,0,0,0,0,1,1,1,1,0,0,1,0,0,0 91 1,0,3,3,0,1,2,6,4,1,0,1,3,3,4,3,4,2,2,2,2,1,4,1,2,4,2,3,0,0,1,2,1,2,2,0,1,3,1,1,0,1,2,1,2,4,2,1,1,0,3,2,0,0,0,1,1,0,1,0,2,2,1,1,4,4,0,1,0,1,4,4,3,3,1,2,2,2,0,2,0,1,4,3,2,2,3,0,8,0,3,0,4,3,1,4,5,2,5,2,0,5,1,0,3,3,0,1,0,9,2,3,0,2,7,3,0 118 0.028473 1 chr4 118673465 118673593 - AC110079.2, chr4 118673482 118673824 h38_mk_AluJb + 4 SRR1390601,SRR1440986,SRR1447693,SRR1455925, 24 0,0,0,1,1,0,1,0,0,0,0,0,0,2,1,1,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,2,0,3,0,0,0,2,0,0,0,1,0,1,0,2,0,0,0,2,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0 44 1,0,2,1,1,1,0,2,0,0,0,1,0,0,0,0,0,2,0,0,2,0,1,0,2,1,0,1,0,0,2,0,0,1,0,0,0,5,0,0,2,1,0,1,0,2,2,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,2,1,0,0,0,1,0,1,0,1,0,2,0,0,0,0,2,1,0,0,3,2,0,0,0,1,0,0,0,0,1,0,0,0,3,0,3,1,2,0,0,1,4,0,3,0,0,0,0,0,0,4,0,0 . . . chr4 118673499 118673593 - AC110079.2, chr4 118673482 118673824 h38_mk_AluJb + 10 SRR1333741,SRR1337098,SRR1348360,SRR1375571,SRR1387264,SRR1402900,SRR1408208,SRR1485459,SRR1487194,SRR658307, 23 1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,2,0,0,1,3,0,0,0,0,0,1,0,0,1,0,0,0,0,1,3,0,0,0,1,0,0,0,1,0,0,0,3,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,5,0,1,0,0,3,0,0,0,0,0,0 44 1,0,2,1,1,1,0,2,0,0,0,1,0,0,0,0,0,2,0,0,2,0,1,0,2,1,0,1,0,0,2,0,0,1,0,0,0,5,0,0,2,1,0,1,0,2,2,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,2,1,0,0,0,1,0,1,0,1,0,2,0,0,0,0,2,1,0,0,3,2,0,0,0,1,0,0,0,0,1,0,0,0,3,0,3,1,2,0,0,1,4,0,3,0,0,0,0,0,0,4,0,0 . . . chr4 118678044 118678138 - AC110079.2, chr4 118678012 118678347 h38_mk_AluJ4 + 20 SRR1084842,SRR1099499,SRR1337098,SRR1340508,SRR1360563,SRR1368772,SRR1386708,SRR1390601,SRR1414897,SRR1435020,SRR1439873,SRR1447693,SRR1453851,SRR1455925,SRR1471943,SRR1487194,SRR1498550,SRR602704,SRR661973,SRR818033, 60 0,0,1,6,1,2,1,0,1,0,1,3,1,0,3,2,0,0,0,0,3,0,3,1,2,1,1,0,0,0,3,1,0,2,0,0,2,1,0,2,0,1,2,2,0,0,0,1,0,2,0,0,1,1,1,2,1,0,1,1,1,1,0,3,0,0,0,0,2,0,2,0,2,0,2,0,1,0,0,1,1,1,0,1,2,0,0,0,3,1,0,0,1,0,2,3,3,0,0,3,0,0,0,0,0,0,0,1,1,11,0,0,0,0,4,2,0 73 2,2,0,2,2,1,0,0,2,0,1,1,1,0,1,0,1,3,0,0,2,1,3,1,0,0,1,3,5,0,0,0,0,1,2,0,1,1,0,1,2,3,0,2,0,1,2,2,3,1,0,1,0,2,1,0,0,0,0,4,3,1,0,2,3,0,1,0,1,0,3,0,4,0,2,1,1,1,2,1,3,0,1,3,1,1,1,0,2,1,0,0,0,2,1,0,3,1,1,2,0,0,2,0,6,2,0,7,0,4,3,0,0,1,6,3,0 75 0.954444 0 chr4 119235290 119235411 + USP53, chr4 119235254 119235587 h38_mk_AluJ - 2 SRR1341763,SRR1471817, 12 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 36 0,0,0,1,1,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,1,0,0,1,2,3,2,0,0,0,1,0,1,0,0,0,0,1,0,1,2,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,2,0,0,3,0,0,0,3,0,0,0,0,2,0,1,1,0,0,2,0,1,0,0,1,0,2,4,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,2,0,0,0 90 0.257381 0 chr4 119499561 119499871 + AC093752.1, chr4 119499526 119499866 h38_mk_AluSq - 6 SRR1414897,SRR602516,SRR602704,SRR657777,SRR662233,SRR821602, 113 0,0,10,13,7,3,16,9,8,5,13,6,5,12,8,8,2,6,2,0,11,9,20,5,13,8,10,6,16,7,10,20,1,11,4,8,11,4,1,11,7,7,5,11,14,4,10,3,6,5,4,4,4,5,7,9,13,4,3,13,6,7,9,7,10,8,5,8,4,6,9,4,16,4,3,14,6,6,4,4,7,20,8,10,6,8,4,1,6,7,11,3,7,9,7,7,14,7,8,11,0,10,1,39,11,20,5,8,10,13,14,9,2,16,14,16,9 11 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,1 116 0.645832 0 chr4 121816144 121816194 + EXOSC9, chr4 121815961 121816268 h38_mk_AluSx - 68 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1341365,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1399779,SRR1402900,SRR1408208,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1444678,SRR1453341,SRR1453851,SRR1457503,SRR1464373,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR602314,SRR602516,SRR604262,SRR607337,SRR661973,SRR662233,SRR663633,SRR814967, 107 6,3,12,8,0,2,8,3,3,2,1,2,7,2,5,1,3,2,3,0,5,1,8,3,6,3,5,0,6,7,2,5,1,1,4,4,6,1,0,11,6,4,1,0,5,2,6,1,3,7,7,2,7,6,1,1,4,6,2,1,1,3,3,12,3,1,2,4,0,2,6,2,3,1,3,3,3,2,2,7,5,6,2,5,4,9,4,4,2,1,4,2,1,1,2,2,3,4,0,7,0,2,2,0,3,1,0,18,1,7,4,3,1,8,3,2,1 109 4,1,10,2,0,5,5,3,4,5,4,1,4,6,3,1,8,6,4,0,3,2,8,4,2,7,7,2,4,6,3,6,5,2,4,2,1,2,3,7,3,7,4,1,6,4,5,1,3,3,5,3,6,5,3,1,8,4,2,7,7,8,3,10,5,0,2,3,3,3,11,2,1,1,3,3,5,3,1,4,4,9,2,3,4,11,3,3,3,0,6,0,4,1,5,4,1,3,3,9,0,3,1,27,1,6,0,1,3,3,3,2,3,4,4,0,2 118 0.098627 1 chr4 121816144 121816447 + EXOSC9, chr4 121815961 121816268 h38_mk_AluSx - 14 SRR1316940,SRR1328895,SRR1331579,SRR1337412,SRR1341763,SRR1367943,SRR1387809,SRR1408368,SRR1444622,SRR1468514,SRR1500868,SRR613627,SRR658307,SRR821602, 107 6,3,12,8,0,2,8,3,3,2,1,2,7,2,5,1,3,2,3,0,5,1,8,3,6,3,5,0,6,7,2,5,1,1,4,4,6,1,0,11,6,4,1,0,5,2,6,1,3,7,7,2,7,6,1,1,4,6,2,1,1,3,3,12,3,1,2,4,0,2,6,2,3,1,3,3,3,2,2,7,5,6,2,5,4,9,4,4,2,1,4,2,1,1,2,2,3,4,0,7,0,2,2,0,3,1,0,18,1,7,4,3,1,8,3,2,1 117 54,32,143,112,53,89,80,87,136,124,66,70,102,88,110,57,81,71,46,54,72,43,304,87,88,69,115,77,96,72,108,252,56,124,92,88,107,62,36,170,121,105,44,71,154,112,115,73,82,67,74,77,82,115,58,61,131,89,47,128,58,103,133,125,110,52,41,41,63,115,143,125,104,50,57,53,110,128,90,92,53,91,61,58,174,158,54,51,32,51,108,9,71,55,51,39,47,84,37,110,6,55,52,179,119,146,91,118,80,131,119,53,62,131,85,119,73 118 0.996314 1 chr4 146199939 146200078 + LSM6, chr4 146199908 146200061 h38_mk_AluJb - 1 SRR661973, 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,3,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,1,0,0,1 . . . chr4 152790759 152790875 + ARFIP1, chr4 152790713 152791047 h38_mk_AluJb - 4 SRR1439873,SRR1498550,SRR601500,SRR814967, 46 0,0,2,2,0,1,0,0,0,0,1,0,1,1,1,0,0,0,0,0,2,0,2,0,1,1,0,0,1,1,1,1,0,0,0,0,0,0,1,2,0,1,0,1,0,0,0,0,0,2,0,0,0,3,0,1,1,0,1,0,1,1,0,1,2,3,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,2,0,0,1,0,1,0,0,1,0,1,1,0,0,0,0,1,0,3,1,0,0,1,1,1,2,0,0,0,0,2,0,1,0 50 0,0,2,0,1,1,0,0,1,0,1,0,0,1,2,0,2,0,0,0,1,0,7,2,0,1,0,0,1,0,0,0,0,0,0,0,1,1,0,1,0,2,1,0,0,0,3,0,1,0,1,0,0,0,1,0,0,0,1,0,1,0,0,3,3,1,0,1,2,0,1,0,0,1,0,0,1,0,0,0,0,0,0,1,1,0,0,1,2,0,2,0,0,2,3,4,3,2,0,1,0,1,0,0,2,1,0,0,0,0,0,0,0,2,2,1,1 95 0.311842 0 chr4 16287711 16287854 + TAPT1-AS1, chr4 16287491 16287727 h38_mk_AluJb - 1 SRR1487194, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0 55 0,0,0,7,0,0,2,1,3,2,4,0,0,0,4,1,0,2,0,0,3,0,7,3,3,0,0,2,0,0,5,2,0,2,3,0,0,0,3,2,2,2,1,6,9,1,0,0,0,4,0,1,0,0,2,0,2,2,0,0,1,0,0,1,3,0,0,0,0,2,0,0,3,0,0,0,3,0,0,3,0,2,0,0,1,4,1,1,0,2,2,1,0,2,0,2,1,0,0,0,0,0,0,0,0,10,0,5,3,0,0,4,0,1,0,1,0 . . . chr4 173166124 173166299 - AC105285.1, chr4 173166178 173166505 h38_mk_AluJ + 25 SRR1072367,SRR1085495,SRR1316940,SRR1326179,SRR1340508,SRR1360563,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1408208,SRR1408368,SRR1415234,SRR1418127,SRR1433796,SRR1435020,SRR1455925,SRR1457482,SRR1498550,SRR1500868,SRR595926,SRR602516,SRR604262,SRR604456,SRR607337, 54 3,1,0,0,3,0,2,0,0,3,0,0,5,0,2,0,1,0,0,0,0,1,7,0,1,0,0,0,1,4,0,1,0,1,0,0,4,2,0,5,12,2,2,0,0,0,1,2,0,0,6,0,0,2,1,3,0,2,0,1,3,0,0,0,0,0,4,1,0,1,5,0,2,2,0,0,0,0,1,0,1,0,1,1,1,0,0,0,5,3,5,0,0,2,0,7,0,2,1,5,0,2,1,0,7,0,0,0,1,0,2,0,0,0,0,0,0 69 7,2,7,0,4,0,2,2,1,7,0,3,0,0,2,2,2,2,1,0,2,1,8,2,0,0,2,2,2,0,0,0,1,2,0,0,3,6,2,3,6,1,0,0,0,0,5,1,5,2,8,1,0,3,3,0,2,1,0,5,2,0,0,0,0,0,0,0,3,0,0,0,5,1,0,2,4,1,1,0,0,3,6,3,0,4,0,0,9,4,3,0,2,1,0,4,3,4,2,2,1,6,0,0,2,1,0,0,2,1,0,0,0,2,0,0,0 92 0.578968 0 chr4 173369434 173369593 - AC097534.2, chr4 173369460 173369641 h38_mk_AluSx + 1 SRR1356444, 117 87,16,22,46,25,42,49,27,40,135,29,27,33,39,69,30,40,53,16,7,31,45,89,44,41,53,46,29,17,61,66,50,21,42,31,24,30,13,26,55,69,74,23,35,33,67,34,56,36,29,69,36,19,43,39,57,71,50,26,58,47,14,21,52,57,27,39,18,52,78,41,45,22,39,30,26,83,36,39,28,34,32,42,44,51,105,54,17,29,20,28,12,32,23,42,12,18,14,16,55,4,46,25,15,70,68,54,14,29,74,39,60,49,37,51,25,16 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr4 173369434 173369610 - AC097534.2, chr4 173369460 173369641 h38_mk_AluSx + 8 SRR1084649,SRR1320963,SRR1340508,SRR1413562,SRR1418837,SRR1435020,SRR1435293,SRR1457482, 117 87,16,22,46,25,42,49,27,40,135,29,27,33,39,69,30,40,53,16,7,31,45,89,44,41,53,46,29,17,61,66,50,21,42,31,24,30,13,26,55,69,74,23,35,33,67,34,56,36,29,69,36,19,43,39,57,71,50,26,58,47,14,21,52,57,27,39,18,52,78,41,45,22,39,30,26,83,36,39,28,34,32,42,44,51,105,54,17,29,20,28,12,32,23,42,12,18,14,16,55,4,46,25,15,70,68,54,14,29,74,39,60,49,37,51,25,16 10 0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,2,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 . . . chr4 174095357 174095453 - LINC02268, chr4 174095182 174095506 h38_mk_AluJ + 1 SRR1464373, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 5 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr4 174095357 174095481 - LINC02268, chr4 174095182 174095506 h38_mk_AluJ + 1 SRR613627, 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 17 0.688725 0 chr4 174318835 174319087 + CEP44, chr4 174318794 174319117 h38_mk_AluSz - 6 SRR1318163,SRR1367943,SRR1434526,SRR1439873,SRR602516,SRR613627, 56 2,0,1,0,1,0,1,2,0,1,2,1,1,0,0,1,1,0,0,2,2,0,3,0,1,0,0,1,1,2,1,0,1,1,0,2,0,0,0,0,1,0,0,0,0,2,0,0,1,1,0,0,0,0,4,3,2,0,1,1,0,0,0,3,0,1,3,0,1,0,1,0,0,1,0,0,0,0,0,2,0,0,2,3,1,1,0,0,4,0,0,0,0,1,4,7,1,0,2,0,0,6,1,0,0,0,2,0,2,2,1,0,0,2,3,0,0 8 0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr4 183474764 183474881 - AC107214.1, chr4 183474484 183474918 h38_mk_AluJo + 1 SRR818033, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0 30 0,0,0,2,0,0,3,1,0,0,3,0,0,0,1,0,0,0,0,0,2,0,8,0,1,0,0,0,0,1,3,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,2,0,3,0,0,2,0,0,0,0,5,0,0,0,0,0,1,0,0,1,0,0,0,0,0,4,0,1,0,1,1,0,0,3,0,0,0,0,0,3,0,4,0,1,6,0,0,0,4,12,0,0 39 0.715290 0 chr4 1893730 1893909 + NSD2, chr4 1893530 1893854 h38_mk_AluJb - 3 SRR1084842,SRR1102055,SRR1340508, 19 0,0,0,3,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,1,0 82 4,2,1,8,0,3,9,3,0,3,3,3,2,1,1,1,1,1,0,2,1,1,7,1,3,4,1,0,3,0,5,1,2,1,0,3,3,3,0,0,4,3,2,0,0,1,2,0,1,4,1,0,1,2,2,1,4,0,1,0,0,0,0,4,3,2,1,2,0,1,2,1,8,2,0,2,3,0,0,2,0,5,0,5,8,0,0,0,3,0,3,0,2,5,1,1,6,1,3,1,0,4,1,0,1,6,0,0,3,1,0,5,0,0,3,9,1 . . . chr4 1954537 1954685 + NSD2, chr4 1954356 1954664 h38_mk_AluJb - 1 SRR1468514, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,0,1,0,3,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 114 0.019578 0 chr4 2337407 2337704 - ZFYVE28, chr4 2337594 2337886 h38_mk_AluJo + 1 SRR1454803, 117 15,7,10,71,31,35,60,41,46,18,47,19,21,20,51,24,44,32,12,4,42,14,133,29,24,21,52,26,48,9,35,41,11,43,13,41,26,31,13,52,40,22,36,45,40,50,49,13,16,32,6,40,14,16,35,37,67,18,43,25,13,26,17,52,41,27,6,9,11,33,32,37,78,28,12,49,78,28,10,32,31,38,9,33,50,45,31,9,16,13,53,4,24,55,43,79,57,4,30,39,2,34,23,35,50,50,24,21,56,74,69,58,6,86,46,82,16 23 1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,3,0,2,0,0,0,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,1,3,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,2,0,0 . . . chr4 2708146 2708268 + FAM193A, chr4 2708107 2708433 h38_mk_AluSq2 - 13 SRR1314163,SRR1328895,SRR1337412,SRR1402900,SRR1408368,SRR1421177,SRR1439873,SRR1444622,SRR1457482,SRR1468514,SRR1487362,SRR1487685,SRR818033, 59 0,4,0,0,2,0,0,1,1,0,1,2,0,1,0,1,1,1,1,0,0,1,2,1,0,0,0,1,0,0,1,1,0,0,0,0,0,1,1,1,2,1,2,1,0,2,0,2,0,0,1,2,0,0,0,1,0,0,0,0,0,1,0,2,0,1,1,0,0,0,0,1,0,3,0,0,4,0,0,0,0,4,1,0,1,1,3,0,1,0,1,0,1,0,3,2,1,0,2,2,0,1,1,0,1,1,0,3,0,0,0,2,2,3,2,1,0 93 6,0,2,5,0,1,2,1,1,1,1,0,0,4,1,1,1,1,0,0,2,1,3,3,3,2,3,0,2,0,6,3,5,3,0,0,3,2,2,5,2,6,0,2,7,3,0,1,4,1,3,3,4,4,4,2,1,2,3,1,2,0,2,2,4,2,5,0,3,6,1,0,3,2,1,3,6,6,2,4,1,1,3,2,3,11,3,1,3,3,1,1,4,2,3,0,2,1,2,3,0,2,0,0,2,2,0,0,4,0,0,3,4,6,3,4,0 118 0.074893 1 chr4 2719980 2720072 + FAM193A, chr4 2719799 2720103 h38_mk_AluJb - 6 SRR1316940,SRR1328895,SRR1360563,SRR1390601,SRR1468514,SRR602516, 32 0,0,0,2,0,1,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,1,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,1,2,0,1,1,0,0,0,0,0,1,0,1,0,0,3,1,0,0,0,1,0,2,0,0,1,0,0,0,1,0,3,1,0,1,0,1,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0 93 0,0,1,3,0,2,2,2,5,9,1,2,1,0,1,4,5,2,0,2,0,2,2,1,0,2,3,2,3,2,0,3,1,4,0,5,1,1,0,7,2,2,3,3,3,3,3,1,2,2,3,1,2,1,1,2,1,3,0,3,2,1,4,0,2,0,1,1,0,3,1,1,2,0,1,1,2,4,0,1,1,1,0,2,4,3,2,2,0,2,1,0,3,3,3,3,1,3,0,4,0,1,1,0,5,2,2,11,0,7,7,2,0,1,4,1,5 118 0.043515 1 chr4 2938693 2938792 + NOP14-AS1, chr4 2938506 2938802 h38_mk_AluJo - 99 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1099499,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818210,SRR821602, 113 8,9,3,10,0,7,2,9,8,17,8,5,7,7,7,2,8,5,6,0,4,9,13,5,5,6,3,2,5,3,4,9,3,5,3,2,5,3,2,9,9,12,6,4,12,4,7,5,7,4,5,6,8,9,10,4,4,4,3,9,1,7,4,7,8,6,6,8,6,5,13,1,11,3,7,3,12,4,7,3,6,5,5,2,19,3,6,3,11,2,8,1,4,1,2,0,2,6,3,7,1,3,3,0,12,8,6,8,4,4,6,7,6,8,2,10,6 114 13,3,2,6,6,4,1,7,1,13,7,10,6,4,9,4,5,6,3,3,8,4,14,10,6,4,3,5,2,1,6,8,5,3,5,6,6,4,1,9,3,12,2,5,9,13,5,0,8,3,5,1,5,7,5,5,2,3,5,3,3,2,8,6,7,10,5,2,14,4,10,4,5,6,0,4,9,3,13,6,1,7,12,4,10,8,10,4,4,4,9,1,4,6,6,6,4,2,8,10,1,5,2,0,8,7,9,2,9,7,8,7,8,11,1,5,10 115 0.717607 0 chr4 38610423 38610557 - KLF3-AS1, chr4 38610255 38610592 h38_mk_AluJb + 1 SRR1468955, 10 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,1,1,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0 . . . chr4 39531969 39532130 + UGDH-AS1, chr4 39531928 39532089 h38_mk_AluJb - 6 SRR1072367,SRR1415234,SRR1498550,SRR662233,SRR818033,SRR821602, 115 19,4,11,16,15,4,4,4,9,19,16,7,14,6,22,7,11,11,0,6,12,15,30,8,10,14,12,15,5,14,4,13,4,10,8,6,15,11,4,8,7,7,6,8,5,12,8,10,8,14,16,13,6,6,3,4,15,5,10,15,7,7,6,8,13,5,9,5,8,4,15,4,18,8,5,22,9,8,14,8,7,16,15,9,10,4,9,3,22,7,19,0,10,10,5,6,22,16,9,8,1,22,2,6,13,5,2,17,8,24,20,14,4,16,23,16,7 56 4,0,0,2,2,0,0,0,2,0,0,1,1,2,1,0,1,1,0,0,1,0,0,0,1,0,1,0,1,1,1,0,0,0,1,2,2,1,0,0,2,0,1,1,0,1,1,1,0,0,3,0,0,0,0,1,0,0,1,0,0,1,0,0,0,2,0,0,0,2,0,1,1,2,0,1,0,0,0,0,1,0,0,0,1,2,2,1,1,0,0,0,2,1,0,1,1,1,0,1,0,1,0,0,1,0,0,0,0,0,2,3,1,0,3,2,4 . . . chr4 46995547 46995664 + GABRB1, chr4 46995362 46995665 h38_mk_AluJ - 1 SRR1464373, 11 0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 58 0.083333 0 chr4 46995549 46995664 + GABRB1, chr4 46995362 46995665 h38_mk_AluJ - 1 SRR1333741, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr4 47136177 47136426 + GABRB1, chr4 47135982 47136283 h38_mk_AluJ - 1 SRR1498550, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr4 54240038 54240115 + PDGFRA, chr4 54239837 54240162 h38_mk_AluJb - 1 SRR1348159, 19 0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,2,0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 60 1,0,1,2,0,1,0,0,2,0,3,1,3,2,3,0,2,2,1,0,2,0,0,2,1,0,5,0,1,3,2,0,0,0,0,1,0,1,0,2,1,0,0,1,0,3,1,1,0,3,1,0,0,0,0,1,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,1,1,0,2,3,0,0,1,2,1,0,1,0,0,1,0,0,1,0,1,1,2,1,2,1,0,0,0,0,0,3,0,4,2,1,0,0,2,1,1,0,0,2,2,2 109 0.130271 0 chr4 83267090 83267208 - COQ2, chr4 83267083 83267414 h38_mk_AluJ + 34 SRR1084842,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1331579,SRR1340508,SRR1357478,SRR1360563,SRR1368772,SRR1387809,SRR1399779,SRR1414897,SRR1418837,SRR1435293,SRR1439873,SRR1440986,SRR1444622,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1471943,SRR1487362,SRR1498550,SRR602516,SRR604456,SRR614802,SRR657635,SRR657754,SRR658307,SRR662534,SRR818033, 73 1,0,0,1,0,0,0,2,4,2,1,2,4,1,1,0,1,1,0,0,1,0,4,4,3,3,2,0,1,0,0,4,0,3,1,1,4,1,0,1,1,2,2,0,3,0,3,0,0,2,1,0,0,0,1,1,0,0,0,3,3,1,0,2,2,1,3,0,0,0,1,0,2,1,3,2,2,0,2,1,0,2,0,0,3,2,2,0,1,1,3,0,3,0,3,2,1,0,4,0,0,1,1,0,2,1,2,2,0,0,2,3,0,2,4,2,0 77 4,0,1,3,0,1,1,3,0,2,3,1,4,1,2,0,1,0,2,0,0,0,2,0,1,0,0,0,1,0,1,2,0,3,1,1,2,4,1,0,1,3,1,1,2,2,0,0,0,1,0,1,1,0,1,2,1,2,1,0,2,1,0,4,2,0,1,2,1,1,1,0,2,3,1,0,5,1,1,1,0,1,0,1,0,2,0,1,1,1,1,0,0,2,0,1,3,1,2,3,0,2,2,0,2,1,0,6,0,0,0,1,0,4,4,1,0 118 0.178164 1 chr4 88316686 88316807 + AC107067.1, chr4 88316457 88316800 h38_mk_AluJo - 57 SRR1072367,SRR1084842,SRR1099499,SRR1314163,SRR1316940,SRR1320115,SRR1326179,SRR1335446,SRR1337098,SRR1340508,SRR1341763,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1375571,SRR1381673,SRR1387809,SRR1390601,SRR1408368,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1432123,SRR1434526,SRR1435293,SRR1435775,SRR1439873,SRR1444622,SRR1444678,SRR1447693,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1500868,SRR601500,SRR602314,SRR604456,SRR607337,SRR614802,SRR657635,SRR661973,SRR662534,SRR814967, 84 1,0,0,4,0,2,1,1,3,5,2,2,7,2,7,3,0,0,5,0,2,0,5,1,5,0,0,4,3,3,4,4,0,6,0,0,2,7,2,2,0,4,0,10,1,1,3,6,2,6,8,3,0,4,3,0,2,2,3,0,4,6,0,5,1,0,9,2,4,1,0,0,1,1,0,4,1,3,9,3,2,7,12,7,2,2,0,1,1,5,1,1,1,6,4,0,0,0,3,3,1,0,2,0,15,4,0,8,0,6,4,3,0,6,0,1,0 101 7,2,4,5,0,1,0,3,5,8,0,6,14,9,14,0,0,3,5,2,2,3,14,4,12,5,0,6,3,11,8,10,1,4,9,0,5,14,3,1,1,6,3,10,9,1,1,13,0,13,6,4,3,6,4,2,6,8,14,1,4,5,0,12,9,2,11,6,2,0,1,1,6,9,1,3,13,5,28,5,4,20,20,23,7,10,0,0,4,14,1,1,2,11,11,2,1,5,7,11,1,1,6,14,35,2,3,0,1,8,0,9,0,11,1,0,7 87 0.994804 0 chr4 98886454 98886546 - EIF4E, chr4 98886422 98886731 h38_mk_AluJ + 57 SRR1072367,SRR1084649,SRR1314163,SRR1315970,SRR1316940,SRR1320115,SRR1320963,SRR1331579,SRR1333741,SRR1337412,SRR1340508,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1402900,SRR1413562,SRR1414897,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1454803,SRR1457503,SRR1471817,SRR1474553,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR602314,SRR602704,SRR604262,SRR604456,SRR657635,SRR818033,SRR821602, 112 2,10,8,4,1,3,4,5,3,8,4,8,7,4,6,2,14,4,2,3,6,3,13,4,1,0,7,6,3,11,5,4,2,2,3,5,6,7,4,5,5,6,6,7,1,8,6,3,7,2,6,3,2,6,6,3,2,2,6,7,11,5,0,5,8,6,10,10,1,3,7,6,7,0,6,10,5,6,4,2,6,5,1,7,4,15,7,3,6,11,6,0,3,7,4,5,10,7,4,8,1,3,4,0,6,3,3,6,4,5,4,3,6,9,13,8,10 111 4,2,8,6,2,5,4,5,2,5,9,2,7,4,8,3,10,6,0,1,7,6,12,6,3,2,2,3,5,5,10,2,4,8,3,5,7,8,2,10,7,6,4,8,0,10,7,2,10,3,5,0,1,1,4,2,3,5,6,3,15,3,4,6,6,4,8,4,2,1,6,5,5,3,4,5,8,0,6,5,4,1,1,16,4,6,4,1,4,4,6,1,4,5,10,4,9,7,7,3,1,0,5,4,12,4,1,2,4,4,0,3,2,6,12,3,8 118 0.085012 1 chr5 110734903 110735015 - TMEM232, chr5 110734895 110735041 h38_mk_AluJo + 6 SRR1341763,SRR1408208,SRR1435293,SRR1455925,SRR1468514,SRR607337, 34 0,0,1,0,0,1,0,1,0,0,0,1,0,0,1,0,0,0,0,0,1,1,3,1,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,1,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,1,2,0,0,0,0,2,0,0,1,2,0,0,0,0,2,1,1,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,5,0,0,0,0,1,0,0,0,1,0,3,0,0,1,0,0,0 91 0,0,0,4,1,3,0,4,0,2,2,2,1,4,4,1,2,9,3,0,3,0,8,1,2,2,2,0,1,0,1,2,1,0,3,10,3,3,2,3,5,1,2,4,3,2,2,2,3,4,0,0,1,2,3,0,2,1,2,0,10,1,1,8,3,1,3,1,2,1,1,0,5,3,1,4,6,1,1,0,1,5,3,2,3,1,4,0,4,3,3,0,1,1,3,0,0,1,5,2,0,4,3,0,4,4,2,6,1,5,0,1,0,1,2,0,0 . . . chr5 119020077 119020240 - AC008629.1, chr5 119020085 119020267 h38_mk_AluJo + 1 SRR600361, 8 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0 4 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0 . . . chr5 132332189 132332310 - MIR3936HG, chr5 132332024 132332334 h38_mk_AluSx + 60 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1348159,SRR1356444,SRR1357478,SRR1360563,SRR1361567,SRR1381673,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1432123,SRR1435020,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1447693,SRR1455925,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR602314,SRR602516,SRR604262,SRR604456,SRR607337,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210, 103 1,1,4,3,4,4,3,2,6,1,1,4,0,5,3,3,1,3,2,0,4,2,9,3,1,1,5,5,3,3,0,4,0,3,5,0,0,1,2,13,2,7,0,6,3,7,4,1,1,4,0,6,4,6,2,2,6,0,0,4,1,1,1,4,4,2,3,1,8,2,2,0,3,3,1,0,1,2,4,3,1,4,4,1,4,1,5,3,3,1,4,2,2,1,3,5,1,5,3,5,0,3,1,5,2,8,4,1,6,5,4,1,0,5,6,3,1 105 2,2,3,3,2,5,6,2,10,3,4,4,3,8,3,9,3,8,4,5,4,4,14,4,1,3,12,0,1,3,2,9,0,6,11,1,1,4,3,7,2,4,2,7,4,7,3,0,4,2,4,6,3,7,4,1,3,0,1,1,1,5,1,3,5,4,5,2,4,5,7,2,6,1,0,2,0,3,3,6,3,3,4,2,1,1,4,1,2,6,4,0,4,2,5,3,4,5,2,5,0,1,1,0,2,6,3,1,2,10,8,0,0,7,10,5,0 . . . chr5 132827461 132827607 - SHROOM1, chr5 132827325 132827659 h38_mk_AluSc + 55 SRR1072367,SRR1084842,SRR1099499,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1331579,SRR1333741,SRR1335446,SRR1337412,SRR1340508,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1361567,SRR1367943,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1399779,SRR1408368,SRR1415234,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1455925,SRR1457482,SRR1468514,SRR1468955,SRR1474777,SRR1487194,SRR595926,SRR602314,SRR604262,SRR613627,SRR614802,SRR657635,SRR661349,SRR662534,SRR814967,SRR818210, 106 2,7,4,3,1,3,1,0,1,3,2,4,4,1,6,0,6,1,3,3,3,3,7,3,4,9,5,5,6,7,5,1,4,2,1,3,1,1,3,3,5,4,3,0,1,0,1,4,0,3,5,3,6,4,2,4,7,2,5,3,0,1,2,5,5,1,1,1,5,3,2,1,2,4,3,3,8,7,1,5,1,5,3,1,6,2,2,0,6,3,1,1,3,1,3,3,3,2,1,2,0,2,1,0,5,2,0,1,2,0,1,1,2,2,2,4,3 97 8,2,0,2,4,3,0,3,2,2,1,2,1,1,0,6,5,1,4,0,1,4,8,3,2,3,2,1,1,2,3,2,3,3,6,1,0,1,3,3,4,4,0,0,6,2,1,3,4,0,2,1,3,1,3,2,1,2,4,2,0,1,4,6,4,3,2,4,5,2,0,3,1,4,0,0,6,4,1,1,2,4,3,2,4,0,5,0,3,3,4,0,1,5,3,2,1,2,4,2,0,3,2,0,2,0,0,1,2,2,1,2,3,1,2,4,0 100 0.988333 0 chr5 134632077 134632195 - SAR1B, chr5 134631908 134632247 h38_mk_AluY + 92 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR662233,SRR662534,SRR818033,SRR818210, 113 7,2,11,13,4,3,2,9,4,7,10,1,8,1,5,0,16,2,4,2,7,0,9,9,8,1,5,1,4,6,6,4,3,5,4,4,2,4,2,7,7,2,7,3,6,12,3,4,6,7,8,3,2,7,5,3,2,13,6,9,10,0,2,8,8,1,5,3,6,6,6,5,1,10,7,12,12,2,15,3,8,8,12,8,10,6,13,3,9,3,5,1,6,1,9,6,4,9,12,10,3,12,3,5,7,9,1,7,12,5,2,4,0,4,18,5,2 107 10,3,8,5,4,1,1,5,1,7,12,3,4,6,3,6,10,2,4,3,4,6,12,2,6,4,3,0,5,6,9,0,2,2,3,5,6,7,0,0,10,7,4,9,1,4,1,2,1,7,5,4,2,6,1,2,0,3,10,3,5,1,1,8,7,1,5,4,7,2,3,6,4,2,2,11,19,4,8,1,3,7,6,8,5,10,9,2,10,6,5,0,3,5,9,4,3,3,8,8,2,14,1,0,3,4,2,0,11,6,1,4,2,0,8,2,0 118 0.333706 1 chr5 138116948 138117197 - NME5, chr5 138116925 138117244 h38_mk_AluJb + 1 SRR1416477, 26 1,0,0,4,0,0,0,0,7,0,0,0,1,2,4,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,1,0,0,0,3,0,0,0,0,0,1,0,0,0,0,3,0,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2,0,0,1,0,0,0,8,0,1,0,0,0,0,0,3,0,0,0,3,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 118 0.007643 1 chr5 138880214 138880288 + CTNNA1, chr5 138880152 138880446 h38_mk_AluJb - 36 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1318163,SRR1326179,SRR1333741,SRR1337098,SRR1340508,SRR1348159,SRR1354446,SRR1357478,SRR1361567,SRR1375571,SRR1390601,SRR1402900,SRR1408208,SRR1416477,SRR1435020,SRR1435775,SRR1439873,SRR1440986,SRR1447693,SRR1455925,SRR1468514,SRR1471943,SRR1474777,SRR595926,SRR601500,SRR602516,SRR613627,SRR661349,SRR662233,SRR814967,SRR818033,SRR818210, 77 0,0,0,14,4,3,9,1,0,0,2,6,0,2,9,1,4,5,0,0,5,1,17,1,4,1,6,0,8,1,0,3,2,1,2,3,3,3,1,2,2,2,0,6,3,7,6,0,0,0,0,5,0,0,2,1,3,0,1,7,3,2,0,13,4,1,0,1,7,2,2,1,10,0,2,2,9,0,0,10,8,8,0,0,6,0,0,0,1,0,9,0,3,12,0,5,2,0,2,0,0,5,0,0,9,1,0,0,8,8,7,5,0,6,9,11,0 76 0,0,0,11,5,4,14,0,2,2,7,9,0,2,4,10,0,8,0,0,10,0,34,7,12,9,8,1,17,2,3,9,1,3,2,8,10,7,0,8,2,0,3,11,0,10,18,0,0,0,0,3,2,0,0,2,5,0,3,10,0,5,0,16,10,0,0,2,9,4,11,0,16,8,1,11,12,4,0,17,0,13,0,6,2,7,0,0,0,1,8,0,5,10,4,12,21,0,5,0,0,5,5,0,0,0,0,0,13,14,21,12,0,42,17,25,0 85 0.939086 0 chr5 150198943 150199048 + SLC6A7, chr5 150198973 150199047 h38_mk_AluJ - 5 SRR1099499,SRR1314163,SRR1421177,SRR1434526,SRR662233, 62 1,0,0,17,3,8,3,2,4,0,14,2,0,1,3,3,2,2,0,1,0,0,4,0,0,0,4,2,0,0,4,7,2,2,2,1,0,0,0,4,0,0,2,6,2,2,0,1,0,2,0,0,0,2,4,4,2,0,1,0,0,0,0,0,0,0,0,0,0,1,4,2,6,1,1,0,3,1,0,3,2,0,0,0,0,0,0,0,0,0,3,0,2,10,0,4,3,0,0,1,0,0,2,0,6,0,0,2,3,3,4,0,1,10,0,4,2 10 0,0,1,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,4,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0 115 0.057438 0 chr5 154443362 154443480 - SAP30L-AS1, chr5 154443196 154443525 h38_mk_AluSp + 1 SRR661973, 17 0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0 53 4,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,1,0,1,0,0,3,0,0,0,1,0,4,0,1,2,1,1,0,3,0,2,0,1,0,0,1,2,0,1,1,0,0,1,0,1,0,0,0,1,1,0,0,0,1,0,0,1,0,1,1,0,0,1,0,0,0,0,2,0,0,0,1,0,1,0,5,1,4,1,1,0,1,1,0,0,1,2,1,1,0,0,0,0,3,0,0,2,0,3,3,1,0,2,1,1,1 . . . chr5 154959051 154959175 + MRPL22, chr5 154959026 154959318 h38_mk_AluJb - 22 SRR1333741,SRR1348159,SRR1348360,SRR1354446,SRR1368772,SRR1375571,SRR1387809,SRR1416477,SRR1433796,SRR1434526,SRR1435775,SRR1453341,SRR1454803,SRR1468514,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR604262,SRR613627,SRR662534, 50 0,0,0,4,0,1,0,0,0,0,0,0,0,0,1,0,3,4,0,0,0,2,1,0,0,0,5,2,2,1,0,0,2,0,0,2,2,1,0,0,0,4,0,1,0,0,3,5,1,0,0,3,0,0,1,0,1,2,2,0,2,1,0,1,1,0,0,0,0,1,2,2,3,0,3,0,2,0,1,0,2,2,0,0,3,12,3,0,2,3,2,0,0,0,0,0,2,3,0,0,0,4,0,0,0,0,0,0,0,0,2,6,0,0,1,0,0 67 3,0,2,1,5,0,8,1,0,0,2,0,2,1,8,0,1,2,0,2,0,0,4,2,0,0,3,4,1,0,0,5,0,1,0,2,3,1,2,2,5,7,1,0,1,3,0,0,0,0,0,1,2,1,0,3,2,1,1,0,1,4,0,0,2,2,2,1,1,4,0,8,0,0,0,1,4,0,0,0,2,0,2,3,0,8,4,0,4,2,5,0,3,0,1,4,0,6,2,6,0,3,0,0,8,0,0,0,0,6,0,6,0,0,0,5,0 118 0.028947 1 chr5 162102554 162102673 + GABRG2, chr5 162102539 162102756 h38_mk_AluJb - 14 SRR1099499,SRR1328895,SRR1340508,SRR1348159,SRR1354446,SRR1375571,SRR1387809,SRR1390601,SRR1408208,SRR1432123,SRR1468514,SRR661349,SRR661973,SRR814967, 66 0,0,0,12,2,2,3,0,1,0,7,1,0,0,5,3,3,0,0,0,2,0,11,2,0,1,5,2,7,0,1,2,0,4,1,2,3,2,0,1,0,4,0,6,0,2,5,0,0,1,0,1,0,0,0,0,4,0,0,1,0,0,1,1,1,1,0,0,0,1,1,0,12,2,0,4,4,0,0,8,0,3,0,4,1,2,0,0,0,0,1,0,1,2,1,5,2,0,0,1,0,1,3,0,2,5,1,0,6,12,11,4,0,7,0,6,0 74 0,0,1,10,1,4,1,1,4,0,4,1,0,0,3,2,1,2,0,0,1,0,10,4,0,2,3,0,5,0,1,1,0,1,4,5,1,7,0,3,2,7,0,4,0,6,9,0,2,2,0,0,0,0,2,0,6,0,1,1,0,1,0,3,1,0,1,0,2,0,0,0,16,1,0,9,10,1,0,6,2,3,0,0,1,3,1,0,0,1,6,0,1,3,3,5,5,0,1,0,1,2,0,0,2,5,1,0,5,7,5,2,0,13,4,3,0 118 0.027232 1 chr5 172958139 172958257 - AC008429.1, chr5 172957973 172958294 h38_mk_AluSp + 26 SRR1072367,SRR1084842,SRR1085495,SRR1326179,SRR1340508,SRR1342045,SRR1348159,SRR1356444,SRR1357478,SRR1375571,SRR1389979,SRR1390601,SRR1408208,SRR1413562,SRR1421177,SRR1435020,SRR1435293,SRR1442571,SRR1444678,SRR1464373,SRR1468514,SRR613627,SRR661349,SRR661973,SRR814967,SRR818033, 103 1,0,2,3,1,2,0,0,1,4,2,1,5,2,4,3,2,7,0,2,5,2,13,2,5,2,5,2,5,2,3,3,0,6,2,5,5,5,3,9,1,8,4,5,4,3,7,3,2,0,2,2,2,1,7,1,2,0,6,3,4,2,4,9,0,4,1,2,2,1,3,2,3,2,6,4,3,4,1,3,6,4,2,0,7,2,1,1,3,3,6,0,1,0,2,3,9,2,1,1,1,2,3,0,1,9,0,0,5,7,8,5,1,7,6,9,3 82 5,2,0,3,2,4,1,0,2,1,2,1,0,0,1,4,0,1,0,3,2,2,6,0,0,1,3,1,3,3,0,5,0,1,0,1,1,3,1,1,1,2,2,2,1,3,4,2,3,1,1,2,2,0,1,2,0,0,1,2,3,1,4,2,2,4,1,1,0,0,1,0,0,0,1,3,5,1,1,1,0,0,1,4,1,1,0,0,3,0,1,0,1,0,0,1,2,0,0,1,0,2,0,0,1,0,1,0,5,3,1,1,0,7,7,2,1 . . . chr5 176919170 176919251 - UIMC1, chr5 176919157 176919279 h38_mk_AluJb + 3 SRR1440986,SRR1474777,SRR1487685, 13 0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,2,0,0,1,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0 30 0,0,3,0,0,0,0,0,2,0,2,3,1,0,0,0,0,0,0,0,0,1,2,0,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,3,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,4,0,0,4,0,0,0,1,2,0,1,0,0,0,0,0,2,0,0,0,3,1,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,6,2,3,2,0,0,1,0,0,3,0,0,0 118 0.015913 1 chr5 177957609 177957925 + AC106795.2, chr5 177957761 177958090 h38_mk_AluJb - 2 SRR1418127,SRR1471943, 104 4,1,4,4,1,6,3,2,6,1,14,6,6,8,3,2,5,19,0,1,14,0,13,1,7,3,6,3,9,5,8,8,3,5,7,4,14,4,0,10,1,3,3,9,5,15,9,0,4,4,2,1,8,1,2,4,11,1,9,3,2,2,4,6,9,3,1,1,8,2,5,3,12,4,7,2,6,5,2,5,2,4,2,4,2,1,0,0,0,4,9,0,1,0,9,1,4,4,7,7,2,4,0,0,5,4,2,15,1,17,9,10,0,2,2,12,0 8 0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr5 178135173 178135312 + RMND5B, chr5 178135131 178135432 h38_mk_AluJb - 12 SRR1320963,SRR1341763,SRR1348159,SRR1356444,SRR1360128,SRR1375571,SRR1440986,SRR1464373,SRR1488651,SRR595926,SRR657635,SRR663633, 82 1,0,3,2,1,1,4,0,2,3,2,0,1,5,2,0,0,2,0,0,2,0,5,2,6,1,4,0,1,4,1,4,2,4,0,1,0,4,0,1,1,2,1,1,3,1,0,2,2,2,0,0,2,1,2,4,0,2,2,2,2,0,0,2,5,0,1,0,1,0,3,0,5,1,1,4,3,2,1,0,3,0,2,3,0,2,1,2,0,1,11,0,1,1,0,2,4,0,1,3,0,0,1,0,8,2,0,1,2,0,1,2,7,1,3,3,0 114 1,5,7,10,3,6,3,3,9,4,8,5,7,9,13,17,6,22,3,0,9,7,29,9,6,11,9,6,16,3,6,9,11,14,2,10,12,15,1,15,12,7,6,5,8,12,8,7,9,9,6,18,6,7,13,2,10,1,6,8,14,6,3,19,17,8,8,6,7,7,5,2,19,6,6,9,11,4,5,15,9,16,6,4,7,8,10,4,8,1,12,0,5,8,4,2,3,1,3,7,1,4,2,0,14,10,6,5,8,23,25,11,9,14,11,12,7 118 0.243188 1 chr5 180301727 180302118 - GFPT2, chr5 180301999 180302314 h38_mk_AluY + 1 SRR1487685, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.002004 1 chr5 181271573 181271689 + AC008443.1,TRIM52-AS1, chr5 181271537 181271853 h38_mk_AluSc8 - 90 SRR1317344,SRR1434526,SRR1453341,SRR1453851,SRR1485459,SRR662534,SRR1077405,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1341365,SRR1341763,SRR1342045,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1433796,SRR1435020,SRR1435775,SRR1437538,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1476571,SRR1487194,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR658307,SRR661973,SRR662233,SRR814967,SRR818033,SRR818210,SRR821602, 110 0,1,4,5,1,5,6,7,3,3,5,2,4,3,6,3,10,5,0,0,7,1,10,3,5,6,6,4,4,5,5,7,3,6,2,2,1,3,0,11,2,1,5,3,6,4,11,1,6,4,2,3,6,2,4,3,12,5,3,4,1,3,3,7,9,2,3,4,1,4,4,1,7,2,2,8,2,4,5,6,4,0,2,4,6,0,2,4,5,1,3,0,3,3,1,6,4,3,4,2,3,5,2,1,8,2,2,3,3,9,3,1,1,7,7,5,1 117 6,5,14,13,2,8,6,5,3,15,10,5,4,10,7,4,11,8,2,8,5,2,20,3,8,2,11,3,6,8,11,6,6,7,4,10,4,6,7,13,11,5,10,17,6,6,10,12,12,3,4,3,8,8,8,4,7,7,7,9,8,13,7,7,13,9,6,5,6,7,16,4,12,3,4,9,8,2,8,14,2,8,9,6,8,8,6,6,3,3,2,1,3,3,5,3,8,7,8,8,1,9,4,18,13,7,2,4,8,6,25,10,2,11,7,6,6 . . . chr5 313697 313850 + PDCD6, chr5 313667 313867 h38_mk_AluJb - 1 SRR661973, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0 89 0,0,5,3,0,4,3,0,3,1,10,5,0,3,8,4,3,0,3,0,7,2,16,2,5,4,11,4,7,3,3,7,5,6,2,8,14,8,1,2,1,9,6,7,10,5,0,4,0,2,2,14,3,2,3,0,8,3,0,2,11,4,4,5,3,3,0,2,4,7,5,0,11,0,0,5,10,5,1,1,9,8,0,0,3,9,2,1,0,4,4,0,0,6,0,0,6,0,0,3,0,2,0,0,9,27,0,2,8,30,5,6,4,13,3,12,2 118 0.013941 1 chr5 313701 313850 + PDCD6, chr5 313667 313867 h38_mk_AluJb - 19 SRR1315970,SRR1317344,SRR1320963,SRR1335446,SRR1354446,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1387809,SRR1389979,SRR1416477,SRR1453341,SRR1468955,SRR1487362,SRR602704,SRR657635,SRR657754,SRR662534, 64 0,0,0,3,0,3,0,0,4,0,4,0,0,2,0,1,0,3,3,0,5,0,7,3,3,1,3,0,4,2,2,3,0,3,2,8,6,5,0,0,0,3,6,2,7,4,0,0,1,3,0,4,0,1,0,3,3,0,2,0,0,0,2,1,3,1,0,1,0,6,2,3,4,0,2,0,4,6,0,5,0,3,2,1,3,9,1,0,0,0,1,0,0,0,3,1,5,0,0,0,0,0,0,0,4,16,0,0,0,0,4,10,0,4,4,0,0 89 0,0,5,3,0,4,3,0,3,1,10,5,0,3,8,4,3,0,3,0,7,2,16,2,5,4,11,4,7,3,3,7,5,6,2,8,14,8,1,2,1,9,6,7,10,5,0,4,0,2,2,14,3,2,3,0,8,3,0,2,11,4,4,5,3,3,0,2,4,7,5,0,11,0,0,5,10,5,1,1,9,8,0,0,3,9,2,1,0,4,4,0,0,6,0,0,6,0,0,3,0,2,0,0,9,27,0,2,8,30,5,6,4,13,3,12,2 118 0.019903 1 chr5 34051882 34052110 - AMACR,C1QTNF3, chr5 34051988 34052156 h38_mk_AluSx1 + 2 SRR1433796,SRR661973, 69 24,2,3,0,2,4,3,2,0,0,2,4,3,0,2,1,0,0,1,1,4,0,0,4,4,1,5,0,4,0,2,2,0,0,0,4,0,2,0,4,0,4,2,0,3,0,3,0,3,0,0,1,1,6,0,0,4,8,0,3,1,1,1,1,6,0,0,0,0,4,2,3,5,0,0,0,0,0,0,6,0,3,1,3,5,0,2,0,5,3,0,4,3,3,0,0,3,0,2,3,0,3,5,0,0,10,0,0,5,14,0,3,7,6,10,0,6 14 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,2,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,1 79 0.896011 0 chr5 38653077 38653160 + LIFR-AS1, chr5 38653069 38653329 h38_mk_AluJb - 1 SRR661973, 35 0,0,1,1,0,0,1,0,1,0,1,1,0,0,2,0,0,0,0,0,0,0,1,1,0,0,1,1,1,0,0,0,2,0,1,0,0,0,0,3,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,1,1,1,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,5,1,1,0,0,2,0,0,0,1,1,0,0 16 0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,2,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,3,0,0,0,0,0,0,4 45 0.951852 0 chr5 38813531 38813711 - OSMR-AS1, chr5 38813514 38813752 h38_mk_AluJb + 1 SRR1487362, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 5 0.700000 0 chr5 41905358 41905480 + C5orf51, chr5 41905379 41905579 h38_mk_AluJb - 1 SRR1455925, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 20 1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,1,1,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0 113 0.026638 0 chr5 43079900 43079954 + AC025171.1,ZNF131, chr5 43079865 43079940 h38_mk_AluSz6 - 5 SRR1102055,SRR1439873,SRR595926,SRR602516,SRR814967, 39 0,0,2,3,1,0,2,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,6,0,4,3,4,0,0,0,1,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,1,1,3,0,0,2,0,0,1,0,0,0,0,0,2,0,0,0,2,0,1,0,0,0,1,0,2,0,0,0,0,0,0,2,0,2,4,0,1,2,0,3,1,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,3,0,2,1,2,0 9 0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0 49 0.779592 0 chr5 43079900 43079990 + ZNF131, chr5 43079865 43079940 h38_mk_AluSz6 - 1 SRR1084842, 39 0,0,2,3,1,0,2,0,0,0,1,0,0,1,0,1,0,0,0,0,0,0,6,0,4,3,4,0,0,0,1,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2,0,0,1,1,3,0,0,2,0,0,1,0,0,0,0,0,2,0,0,0,2,0,1,0,0,0,1,0,2,0,0,0,0,0,0,2,0,2,4,0,1,2,0,3,1,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,3,0,2,1,2,0 2 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 93 0.237019 0 chr5 43383965 43384062 - CCL28, chr5 43383795 43384119 h38_mk_AluSq + 2 SRR595926,SRR662534, 28 1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,3,1,0,0,0,0,0,0,0,0,1,2,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,1,0,2,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,3,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,0,2,3,1,3,2,10,0,1,0,0,0,0,1 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0 104 0.103064 0 chr5 55404997 55405319 + SKIV2L2, chr5 55404783 55405106 h38_mk_AluSc - 1 SRR1476571, 13 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 30 0,0,0,0,0,1,0,0,0,1,0,0,0,1,4,1,0,0,0,0,0,1,5,0,0,0,0,0,0,3,0,0,0,0,1,0,1,0,0,0,0,1,0,1,1,0,0,1,3,1,1,0,0,0,0,0,0,3,0,0,2,0,0,0,0,0,4,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,3,0,0,0,0,3,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0 118 0.016786 1 chr5 69562673 69562770 + GTF2H2C, chr5 69562638 69562933 h38_mk_AluSz - 37 SRR1084842,SRR1317344,SRR1326179,SRR1328895,SRR1331579,SRR1340508,SRR1341763,SRR1342045,SRR1348360,SRR1356444,SRR1357478,SRR1360128,SRR1390601,SRR1408208,SRR1432123,SRR1435020,SRR1435293,SRR1439873,SRR1444622,SRR1447693,SRR1453851,SRR1455925,SRR1468514,SRR1474553,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR602704,SRR604262,SRR604456,SRR607337,SRR657635,SRR661973,SRR662233,SRR662534,SRR818033, 83 1,2,0,7,2,1,0,0,1,3,2,1,2,2,8,1,6,0,5,0,1,0,11,2,1,3,0,1,3,2,2,5,1,3,0,0,1,3,0,3,0,3,3,3,1,0,2,2,3,0,2,1,1,1,0,1,6,0,1,2,2,3,0,4,4,0,2,1,3,2,1,0,8,0,0,0,2,0,0,1,4,0,1,3,2,4,3,0,7,1,2,1,0,0,0,3,2,4,1,2,0,0,3,0,1,1,2,0,4,4,7,5,0,3,4,4,0 106 1,5,1,7,0,3,5,4,3,3,4,2,0,2,10,6,19,5,3,1,6,3,12,0,5,11,7,7,6,2,4,5,3,3,3,5,5,7,0,2,5,11,2,12,1,3,6,2,6,2,4,3,2,4,1,3,12,2,4,6,8,2,2,16,6,1,6,6,12,1,4,4,14,0,1,3,11,6,4,4,11,3,11,11,6,7,2,1,7,2,2,0,1,5,5,0,5,11,14,9,2,6,8,0,14,7,0,5,2,15,11,5,0,13,13,1,0 116 0.481207 0 chr5 74772313 74772421 + NSA2, chr5 74772115 74772428 h38_mk_AluY - 111 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 117 18,10,22,28,13,20,16,19,19,13,27,7,11,6,27,8,16,22,5,2,9,6,41,20,16,12,10,8,19,9,20,38,5,19,6,14,38,14,5,31,12,23,12,17,17,32,14,9,8,22,19,21,16,8,15,17,18,11,7,13,34,8,15,24,28,5,8,11,15,17,24,30,23,13,1,18,24,16,7,13,16,13,11,23,29,32,9,4,10,6,19,2,21,17,17,19,12,13,19,17,1,9,7,17,28,16,7,25,13,13,32,22,15,21,31,23,3 116 7,3,6,7,7,10,8,14,7,14,5,9,10,7,22,16,12,16,4,5,8,11,42,12,11,14,13,7,14,11,11,9,6,10,5,3,16,4,2,16,17,21,12,10,13,16,7,11,16,13,4,10,3,10,12,16,17,12,9,21,2,5,11,6,9,8,5,5,5,10,13,17,8,10,8,13,15,10,7,12,6,14,6,14,11,19,14,4,9,3,6,3,5,8,11,14,9,5,8,9,0,12,8,14,42,7,15,15,2,1,7,23,7,12,29,15,2 118 0.159388 1 chr5 79104164 79104278 - DMGDH, chr5 79104187 79104475 h38_mk_AluJ + 3 SRR1390601,SRR1468514,SRR818210, 34 0,0,0,4,0,0,0,0,0,0,1,0,1,0,1,0,1,1,0,0,1,0,3,0,2,0,2,0,0,0,0,0,0,0,1,1,1,1,0,0,0,0,0,2,0,2,0,1,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,3,3,2,0,1,0,1,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,2,0,0,0,0,0,0,4,0,0,0,0,0,3,0 22 0,1,0,0,0,0,0,0,2,0,0,2,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,1,2,0,0,0,1,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0 . . . chr5 80485878 80486220 - AC008771.1, chr5 80485932 80486247 h38_mk_AluSz + 2 SRR1333741,SRR1455925, 43 0,0,0,5,4,3,0,0,1,3,7,0,1,0,0,0,0,12,3,0,0,0,14,0,0,7,2,0,8,1,3,0,1,0,0,3,0,1,0,3,0,6,2,5,0,0,8,0,0,0,1,0,0,0,2,0,3,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,12,2,0,5,4,0,0,3,2,0,0,4,0,0,0,0,0,2,8,0,0,0,0,4,6,0,0,2,0,4,0,0,0,4,0,0,0,0,0,0,0,10,0,6,0 18 0,0,0,0,4,0,7,0,0,0,0,0,0,0,1,0,0,10,0,0,0,0,0,0,9,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,3,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,4,0,4,5,0,0,0,0,0 93 0.300846 0 chr5 80485891 80486220 - AC008771.1, chr5 80485932 80486247 h38_mk_AluSz + 1 SRR1455925, 22 0,0,0,0,0,0,1,0,0,0,4,0,0,0,0,0,1,0,0,0,3,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,4,0,0,0,4,0,0,0,2,0,0,0,0,4,0,0,0,0,0,0,1,0,4,0,5,0,0,0,0,0,0,3,0,0,0,0,3,2,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,6,3,0,0 18 0,0,0,0,4,0,7,0,0,0,0,0,0,0,1,0,0,10,0,0,0,0,0,0,9,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,0,0,0,3,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,4,0,4,5,0,0,0,0,0 94 0.211541 0 chr5 81976193 81976327 + ATG10, chr5 81975981 81976318 h38_mk_AluYf1 - 9 SRR1335446,SRR1342045,SRR1389979,SRR1416477,SRR1437538,SRR1455925,SRR1487194,SRR1498550,SRR657754, 95 2,4,1,3,3,3,0,0,1,3,6,4,0,1,1,9,3,7,7,0,3,2,8,0,6,6,5,4,2,1,2,0,1,4,1,3,4,0,0,4,0,2,5,2,5,1,6,1,4,2,2,3,0,1,2,1,1,4,3,1,4,5,5,3,3,2,2,0,1,0,4,2,12,4,1,4,3,3,2,5,2,5,2,10,3,0,3,1,1,0,2,0,1,1,0,1,0,0,1,1,0,0,3,0,4,2,1,4,8,5,5,6,1,6,5,1,0 109 4,10,5,2,5,7,7,3,1,4,6,5,4,4,5,3,7,8,2,0,2,3,12,5,5,5,4,3,3,5,2,1,2,6,0,7,7,6,2,7,7,7,7,11,2,5,2,6,6,5,1,2,3,2,2,4,5,10,2,8,5,9,4,14,3,2,12,3,8,5,6,4,16,4,3,9,10,2,4,15,2,7,2,6,5,4,4,0,2,1,7,0,3,3,0,0,6,2,2,4,1,4,4,5,7,7,1,0,9,7,14,10,0,16,5,18,2 118 0.520613 1 chr5 90490593 90490762 + POLR3G, chr5 90490373 90490717 h38_mk_AluJ - 1 SRR1408208, 35 0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,2,0,0,0,0,4,0,3,0,0,0,1,2,1,0,0,0,0,1,0,2,1,3,0,3,0,0,1,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,1,0,0,1,2,0,3,0,0,0,0,2,1,0,2,0,0,0,0,0,0,0,0,2,1,1,0,0,1,0,1,2,0,1,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 115 0.101451 0 chr5 91313638 91313777 - AC123595.2, chr5 91313492 91313817 h38_mk_AluY + 3 SRR1102055,SRR1331579,SRR1498550, 74 0,0,2,1,1,0,1,1,1,0,1,2,2,2,0,1,7,1,0,0,3,2,0,0,1,1,2,0,0,1,1,3,1,1,1,2,2,0,0,3,0,3,1,2,1,0,1,1,1,0,2,0,0,1,0,1,0,1,1,2,1,1,0,1,1,0,0,0,2,2,0,1,2,1,1,3,2,0,4,0,0,1,0,2,0,1,2,0,3,0,0,0,1,1,0,1,1,0,1,1,2,0,0,0,1,4,0,1,2,2,1,0,0,4,0,2,4 22 0,0,0,0,0,1,2,1,0,1,0,0,0,0,0,0,9,0,0,0,2,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,2,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0 . . . chr5 93544795 93544915 - NR2F1-AS1, chr5 93544632 93544949 h38_mk_AluSc + 115 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 12,7,11,25,16,28,21,13,16,18,20,13,15,9,21,19,11,21,12,5,19,9,62,11,22,15,28,9,20,15,12,20,4,18,13,27,27,14,10,24,23,32,19,22,19,19,19,14,11,18,6,19,9,11,9,11,19,2,16,24,15,18,14,22,29,15,5,9,10,9,26,16,29,18,12,19,24,13,3,15,17,20,10,26,21,15,8,3,14,10,27,5,11,24,15,27,26,13,19,24,5,18,4,33,24,46,2,15,16,37,48,19,4,29,42,38,6 117 14,12,15,58,29,39,49,13,31,27,46,16,21,30,58,31,10,54,14,12,23,14,117,13,41,23,30,15,40,26,25,40,16,33,24,29,46,31,4,43,39,22,29,36,26,34,36,20,16,40,7,32,10,12,19,19,35,13,39,39,39,26,20,53,43,8,9,27,16,19,33,16,49,26,17,27,38,29,7,39,36,45,15,28,41,30,14,11,20,16,47,1,15,35,33,43,47,13,24,17,4,27,22,5,65,65,21,30,32,57,94,33,5,56,39,55,7 118 0.993563 1 chr5 96898447 96898563 - ERAP1, chr5 96898450 96898777 h38_mk_AluSx1 + 1 SRR1386708, 14 0,0,0,0,0,0,5,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,2,0,0,3,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,4,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 9 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,4,0 79 0.114574 0 chr6 10672547 10672636 - C6orf52, chr6 10672515 10672663 h38_mk_AluJ + 30 SRR1099499,SRR1102055,SRR1320115,SRR1320963,SRR1333741,SRR1337412,SRR1340508,SRR1341763,SRR1342045,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1368772,SRR1386708,SRR1387809,SRR1416477,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR602314,SRR604262,SRR662233, 67 0,5,0,0,1,1,2,0,4,0,1,0,2,2,1,0,1,4,0,1,0,2,1,1,3,1,0,0,2,0,1,3,2,1,0,0,4,0,1,4,0,3,1,0,0,1,0,0,0,2,1,3,1,1,0,1,1,3,2,4,1,2,5,3,2,1,0,0,3,0,1,0,1,1,0,0,4,1,0,1,3,1,1,0,2,1,2,0,0,0,0,0,0,1,3,0,0,2,0,0,0,1,0,0,2,0,3,0,0,0,4,1,0,0,0,1,3 68 1,0,0,1,0,2,2,0,0,2,1,0,5,1,0,0,0,1,0,3,0,4,3,0,3,1,4,1,0,0,2,4,1,4,0,0,1,1,0,3,0,3,0,0,2,1,0,0,1,0,0,1,1,2,1,1,3,1,0,2,4,1,6,2,4,0,1,1,0,0,1,1,1,5,2,1,2,1,0,1,2,3,2,2,1,1,0,0,3,2,3,0,1,0,1,0,0,3,0,0,0,1,0,0,4,0,3,0,2,0,4,0,0,0,0,0,0 115 0.283455 0 chr6 107682138 107682261 + SOBP, chr6 107682107 107682365 h38_mk_AluJ4 - 1 SRR1432123, 27 3,0,0,0,0,1,0,0,3,0,0,0,1,2,1,1,0,0,0,0,0,0,3,0,1,0,0,0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,2,0,1,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,1,0,1,0,0,0,4,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 7 0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 . . . chr6 109404929 109405048 - PPIL6, chr6 109404770 109405080 h38_mk_AluSx3 + 33 SRR1084649,SRR1084842,SRR1102055,SRR1315970,SRR1340508,SRR1348159,SRR1354446,SRR1356619,SRR1360563,SRR1368772,SRR1387264,SRR1387809,SRR1389979,SRR1399779,SRR1413562,SRR1415234,SRR1433796,SRR1435293,SRR1444678,SRR1457503,SRR1468514,SRR1468955,SRR1474553,SRR1485459,SRR1498550,SRR1500868,SRR601500,SRR602314,SRR602516,SRR604456,SRR607337,SRR814967,SRR818033, 64 0,0,2,2,0,0,2,1,2,0,2,0,1,0,2,0,0,1,1,0,0,0,2,0,2,0,3,1,2,0,1,1,0,2,1,0,2,0,0,0,1,2,1,0,3,0,1,0,1,0,4,0,0,2,0,1,2,2,3,0,1,0,1,1,0,0,0,2,0,1,1,2,0,0,3,0,3,1,0,1,1,0,1,3,0,0,2,0,4,2,0,0,0,3,2,2,1,1,2,6,0,2,0,15,0,1,1,2,0,0,0,0,0,2,3,1,0 79 1,0,1,2,3,1,2,1,2,0,1,0,0,0,2,0,3,2,0,0,1,1,6,0,1,2,5,0,2,2,3,2,1,1,0,0,3,0,0,5,2,2,2,2,1,0,0,0,2,1,3,0,1,0,2,1,0,1,1,2,2,0,0,0,1,1,0,5,1,1,0,3,1,2,2,1,3,2,0,1,2,1,0,3,2,3,0,0,2,2,1,0,0,3,2,3,4,1,2,1,0,4,0,0,3,1,0,2,3,0,5,1,0,3,3,7,0 117 0.148344 0 chr6 111740981 111741093 - FYN, chr6 111740853 111741133 h38_mk_AluJb + 4 SRR1084842,SRR1335446,SRR1367943,SRR1387264, 49 0,0,1,6,3,0,2,3,2,6,0,1,0,3,0,0,2,0,3,0,2,1,11,0,0,3,0,0,0,3,0,0,0,0,0,6,4,0,0,0,7,0,3,2,2,2,0,0,0,4,0,0,0,3,0,5,3,0,0,3,3,0,0,4,4,0,5,0,0,4,0,0,3,2,2,5,3,0,0,2,0,3,0,0,4,5,0,0,0,0,0,0,0,6,2,0,5,0,10,0,0,0,0,0,2,0,0,0,0,0,0,0,0,3,0,5,0 37 0,0,0,6,0,0,0,4,0,0,2,0,2,1,6,0,0,0,3,2,0,0,12,0,0,0,4,0,3,0,0,0,0,0,0,6,0,1,0,0,7,4,0,0,2,2,0,0,0,0,0,0,0,0,1,0,2,0,0,0,4,0,0,0,5,0,3,0,0,1,0,2,4,0,1,0,0,0,0,0,0,0,0,2,0,1,2,0,0,0,0,0,0,3,0,0,0,1,4,0,0,1,0,0,0,0,1,0,3,2,6,0,0,0,0,0,0 118 0.012578 1 chr6 125796680 125796797 + NCOA7, chr6 125796634 125796905 h38_mk_AluSz - 2 SRR1435020,SRR818210, 7 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0 72 2,2,0,3,1,2,8,0,3,0,3,1,1,1,2,3,0,1,0,0,2,0,4,0,2,0,4,0,0,0,1,2,0,0,0,2,1,1,0,1,2,2,0,3,1,0,2,1,0,1,0,0,0,0,2,1,1,0,0,1,0,1,0,3,1,0,0,1,1,0,5,0,7,2,0,4,2,1,0,7,4,7,1,1,2,1,0,0,0,0,0,1,1,2,2,3,6,2,1,0,0,5,0,0,3,4,0,3,5,1,6,2,0,1,1,12,0 . . . chr6 127807216 127807332 - THEMIS, chr6 127807071 127807379 h38_mk_AluS7 + 21 SRR1084842,SRR1314163,SRR1326179,SRR1328895,SRR1337098,SRR1341365,SRR1386708,SRR1387264,SRR1390601,SRR1421177,SRR1453341,SRR1455925,SRR1471943,SRR1485459,SRR1487194,SRR602516,SRR613627,SRR614802,SRR661349,SRR814967,SRR818033, 60 4,0,0,5,1,1,5,1,1,0,0,1,0,0,4,4,0,1,0,0,2,0,3,2,3,0,2,0,0,0,2,0,0,2,0,0,0,0,0,3,10,3,0,3,0,1,0,1,0,0,0,3,0,0,0,3,4,2,5,4,0,0,0,0,1,0,0,1,1,2,3,2,10,1,0,0,7,0,0,3,0,0,0,3,10,1,0,0,1,0,0,0,6,1,1,6,1,0,0,3,0,5,4,0,4,0,0,6,3,0,2,1,0,10,6,3,0 47 0,0,0,4,0,1,0,2,1,1,0,1,0,0,4,2,1,1,0,0,2,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,2,1,1,0,1,0,0,0,0,0,0,1,0,1,0,0,3,0,0,1,1,0,2,0,0,1,0,0,0,0,2,1,0,1,2,0,1,0,0,0,3,1,1,0,2,2,1,0,0,0,0,0,0,1,0,0,6,0,0,0,3,0,5,1,0,0,0,0,0,1,1,0,1,0,7,4,0,0 102 0.199972 0 chr6 13281429 13281553 - AL008729.1, chr6 13281262 13281592 h38_mk_AluSz + 2 SRR1498550,SRR662534, 51 0,1,0,1,1,0,0,1,1,1,2,0,0,0,1,2,0,2,0,0,1,0,0,0,0,1,0,0,0,2,1,0,0,0,0,1,1,0,0,1,0,0,0,1,0,1,0,0,2,0,1,2,0,1,1,0,2,2,1,3,0,0,0,0,0,1,0,0,4,0,1,0,1,2,0,1,4,0,0,1,0,0,0,2,0,1,3,0,4,0,0,0,1,0,0,1,0,2,1,1,0,1,0,0,0,0,0,2,0,4,0,2,0,0,1,0,2 46 0,0,0,2,0,1,1,0,1,0,0,0,0,0,1,0,1,0,0,0,2,1,0,0,1,0,0,0,0,0,2,2,0,1,0,0,0,2,2,0,0,1,0,1,1,1,0,0,1,1,4,0,0,1,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,1,2,0,0,1,0,0,0,2,1,1,0,0,1,2,0,0,0,0,1,1,0,0,0,2,0,0,6,1,0,0,0,2,0,0,3,3,0,0,0,1,0,4,0,2,3,0,1 . . . chr6 134464741 134464849 + LINC01010, chr6 134464687 134464779 h38_mk_Alu - 7 SRR1072367,SRR1316940,SRR1326179,SRR1337412,SRR1341365,SRR1433796,SRR661973, 36 7,1,0,0,1,0,0,3,0,1,0,0,1,1,4,0,1,0,1,1,1,2,0,3,1,0,4,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,1,6,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,0,0,2,0,1,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,2,0,0,0,1,1,0,0,0,0,0,0,0,3,0,0,0,1,0,0,0 51 15,2,1,2,2,0,0,0,0,8,0,1,3,0,4,1,1,1,4,0,0,6,1,6,2,0,2,2,0,0,0,0,1,1,0,2,0,0,0,0,3,5,0,0,1,1,0,3,1,0,2,1,0,0,0,0,0,12,1,0,0,0,0,1,0,0,0,1,0,2,0,1,0,0,0,2,0,0,0,0,0,1,0,0,4,2,0,0,4,0,0,1,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,12,1,0,0,0,1,1,4 . . . chr6 134470909 134471026 + LINC01010, chr6 134470874 134471192 h38_mk_AluJ - 4 SRR1072367,SRR1316940,SRR1341365,SRR1433796, 22 9,1,1,0,0,0,0,0,0,4,0,0,3,0,2,0,0,0,3,0,0,1,1,2,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,2 15 2,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 49 0.391777 0 chr6 158873528 158873621 + C6orf99, chr6 158873310 158873647 h38_mk_AluJ4 - 2 SRR602516,SRR604262, 29 0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,1,0,0,0,0,1,0,0,1,0,1,1,0,0,1,0,0,1,0,0,0,0,0,1,1,2,1,0,0,0,0,1,2,0,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,3,0,2,0,0,0,0,0,0,0,0,0,0,0,2,1,4,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0 42 0,0,0,1,0,1,0,0,0,2,0,0,1,2,1,0,1,1,1,2,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,2,1,1,0,0,0,0,0,3,0,1,2,0,0,0,1,1,0,1,0,0,0,0,0,1,1,0,0,0,1,0,0,1,0,0,0,1,1,0,0,1,1,0,0,0,3,0,0,1,0,1,0,2,0,0,1,1,0,0,2,0,2,0,2,0,4,0,0,0,0,0,0,0,1,0,0,0,3,1,0,0 . . . chr6 163312779 163312895 + PACRG, chr6 163312735 163313064 h38_mk_AluJ - 30 SRR1085495,SRR1326179,SRR1333741,SRR1337412,SRR1341763,SRR1357478,SRR1360563,SRR1361567,SRR1368772,SRR1381673,SRR1408208,SRR1432123,SRR1435293,SRR1435775,SRR1437538,SRR1447693,SRR1453851,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR600361,SRR607337,SRR613627,SRR661349,SRR662233,SRR662534,SRR814967,SRR818210, 61 0,0,1,1,1,0,0,0,0,0,4,0,1,0,3,0,0,1,0,1,0,3,2,0,2,2,3,1,0,0,0,2,0,1,1,3,3,0,3,1,0,0,0,2,2,0,3,0,0,2,0,0,2,0,0,0,2,0,2,3,2,1,2,0,0,0,1,1,1,1,2,1,0,1,0,1,1,2,1,1,1,0,2,1,0,0,0,0,0,0,1,0,1,0,0,0,0,2,0,1,0,1,0,0,1,0,0,1,1,1,4,2,0,1,0,4,1 96 2,0,0,1,1,4,3,3,7,5,3,0,0,4,3,3,3,9,0,1,4,4,15,0,2,2,3,0,6,4,1,8,3,5,5,3,4,2,1,1,5,3,0,5,2,0,1,2,1,2,4,0,2,3,2,2,3,1,3,4,1,7,4,2,2,1,0,1,4,1,3,6,3,2,2,4,4,2,2,2,1,3,0,1,2,0,1,4,2,1,2,0,3,2,2,0,4,2,1,4,0,4,0,6,5,7,0,0,2,0,3,3,4,11,1,2,0 117 0.113424 0 chr6 169572419 169572540 - WDR27, chr6 169572249 169572579 h38_mk_AluSc + 21 SRR1315970,SRR1317344,SRR1320963,SRR1326179,SRR1337098,SRR1340508,SRR1357478,SRR1386708,SRR1390601,SRR1415234,SRR1437538,SRR1440986,SRR1455925,SRR1485459,SRR601500,SRR607337,SRR657635,SRR662233,SRR814967,SRR818033,SRR818210, 86 2,1,2,3,1,0,5,2,5,1,4,1,1,4,3,2,1,0,1,0,4,1,2,1,1,1,0,3,1,0,0,2,0,2,0,1,2,0,0,4,0,1,0,3,0,2,0,1,3,8,3,0,1,2,0,2,3,1,0,0,1,3,2,3,9,3,2,1,2,1,1,0,3,2,2,0,1,3,2,3,1,1,1,4,0,4,1,0,0,1,3,0,3,2,0,2,0,3,0,2,0,2,0,0,1,2,0,4,3,1,7,1,2,1,3,4,3 68 1,0,0,1,0,1,0,0,3,0,6,0,1,6,2,0,0,0,0,0,2,1,3,0,0,0,1,0,1,2,2,2,1,2,0,0,0,1,1,1,2,0,0,2,1,0,3,1,0,0,2,0,0,1,0,1,1,0,0,1,0,3,2,2,4,2,1,0,1,1,1,2,5,0,1,2,3,0,3,0,2,1,1,2,0,2,4,0,1,1,1,0,1,1,1,1,0,0,0,1,0,0,1,0,1,0,0,5,0,0,2,0,0,2,2,2,1 116 0.281950 0 chr6 17651834 17651926 - NUP153, chr6 17651802 17652076 h38_mk_AluJo + 2 SRR1085495,SRR814967, 73 1,0,1,3,4,1,2,0,2,0,3,2,1,0,1,2,0,1,2,0,1,0,5,3,1,1,2,0,0,1,0,0,0,0,0,1,1,1,0,2,1,0,0,0,2,3,2,3,0,0,0,2,0,1,2,1,0,1,4,2,1,1,0,1,1,0,0,1,1,0,1,1,1,0,0,1,3,0,0,2,2,0,1,4,0,1,1,0,1,1,2,2,0,0,2,1,1,2,0,3,0,4,2,0,9,2,0,0,1,0,2,4,0,5,7,6,0 14 0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,2,0,0,0 117 0.111464 0 chr6 29747148 29747425 - HLA-F-AS1, chr6 29747140 29747466 h38_mk_AluY + 3 SRR1387264,SRR1487685,SRR663633, 28 1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,2,0,1,1,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,3,0,2,3,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,4,0,0,0,2,0,1,2,2,0,2,1 29 1,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,2,0,0,0,0,0,1,1,1,0,1,0,0,0,0,1,1,0,2,0,0,1,0,0,0,1,0,0,2,0,0,0,0,1,0,0,2,1,1,0,1,0,0,0,0,0,0,2,0,7,0,0,0,0,4,2,1,0,0 . . . chr6 2993931 2994053 + NQO2, chr6 2993891 2994084 h38_mk_AluJ - 5 SRR1367943,SRR1386708,SRR657777,SRR662534,SRR818033, 115 3,2,20,27,19,13,20,13,23,30,33,13,20,23,18,16,13,28,5,4,12,7,84,10,24,10,17,17,19,12,21,38,8,14,14,23,38,16,5,25,17,15,19,14,13,19,21,15,1,18,4,14,20,19,10,8,36,8,15,27,20,10,13,42,42,16,4,14,11,24,16,21,25,17,9,19,24,25,13,19,16,23,4,12,25,27,17,8,11,6,23,0,16,18,17,22,18,12,6,25,0,8,10,6,17,20,15,2,30,7,28,22,33,28,27,31,3 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,8,0,0,8,0,0 . . . chr6 3138041 3138179 + BPHL, chr6 3138016 3138327 h38_mk_AluSc - 10 SRR1072367,SRR1326179,SRR1340508,SRR1381673,SRR1408368,SRR1439873,SRR1440986,SRR1488651,SRR613627,SRR614802, 104 1,0,0,6,0,5,0,2,9,4,0,4,1,6,10,1,1,9,1,0,6,3,20,9,1,5,4,1,2,5,2,6,4,7,4,5,3,4,3,4,2,3,4,4,2,5,8,4,7,5,4,4,8,2,3,1,7,1,1,8,2,5,5,10,13,4,1,3,2,5,3,7,3,5,4,4,14,5,3,11,0,5,4,1,4,4,9,2,5,6,7,0,3,7,10,0,6,3,1,3,0,3,5,0,6,4,1,5,9,9,13,9,0,11,5,5,0 113 3,3,3,9,0,5,5,2,6,6,3,4,4,5,11,3,5,5,2,0,7,0,13,9,9,6,4,8,4,3,6,14,6,8,5,3,5,4,4,6,2,5,3,6,4,6,10,9,9,14,2,5,7,3,6,4,6,2,5,8,7,6,7,13,16,7,5,3,2,5,2,4,3,6,12,2,9,6,1,3,5,14,11,8,2,2,8,3,11,11,9,1,4,1,3,3,3,3,5,12,1,11,4,0,24,9,4,3,7,13,3,4,8,2,4,5,2 . . . chr6 3138041 3138359 + BPHL, chr6 3138016 3138327 h38_mk_AluSc - 1 SRR614802, 104 1,0,0,6,0,5,0,2,9,4,0,4,1,6,10,1,1,9,1,0,6,3,20,9,1,5,4,1,2,5,2,6,4,7,4,5,3,4,3,4,2,3,4,4,2,5,8,4,7,5,4,4,8,2,3,1,7,1,1,8,2,5,5,10,13,4,1,3,2,5,3,7,3,5,4,4,14,5,3,11,0,5,4,1,4,4,9,2,5,6,7,0,3,7,10,0,6,3,1,3,0,3,5,0,6,4,1,5,9,9,13,9,0,11,5,5,0 17 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,1,0,0,0,1,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,0 . . . chr6 31836295 31836517 + C6orf48, chr6 31836263 31836545 h38_mk_AluJb - 2 SRR1413562,SRR602704, 37 0,0,0,2,1,0,0,0,0,0,0,0,1,3,2,0,5,0,0,0,0,0,0,0,0,0,2,3,0,1,0,2,1,0,1,0,0,0,1,0,1,3,1,1,3,0,0,0,5,0,3,1,2,0,0,0,2,0,3,5,4,0,0,3,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,1,2,0,0,0,2,1,6,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0 117 164,300,239,111,102,96,145,148,110,105,83,79,76,92,164,80,172,170,107,78,84,194,228,94,136,89,105,91,103,103,112,211,111,120,82,90,157,86,84,147,168,214,95,131,88,181,136,112,102,163,328,80,79,100,90,72,167,343,78,194,218,91,102,135,131,81,113,114,112,63,123,194,97,171,53,81,213,102,197,79,68,142,135,151,176,358,148,64,332,107,102,26,110,99,140,174,69,146,113,142,11,205,49,149,178,105,85,114,75,154,154,118,117,169,170,109,97 118 0.276160 1 chr6 31836299 31836517 + C6orf48, chr6 31836263 31836545 h38_mk_AluJb - 46 SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1348360,SRR1356619,SRR1360563,SRR1361567,SRR1368772,SRR1387809,SRR1390601,SRR1402900,SRR1408368,SRR1418127,SRR1433796,SRR1435293,SRR1435775,SRR1440986,SRR1444622,SRR1454803,SRR1457482,SRR1468514,SRR1471943,SRR1474777,SRR1485459,SRR1487194,SRR1498550,SRR1500868,SRR602314,SRR602516,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR658307,SRR661349,SRR814967,SRR818210, 94 4,9,6,1,2,1,6,4,6,0,8,0,4,2,7,4,7,6,0,4,6,4,20,3,5,0,3,12,0,3,4,5,2,5,4,0,9,0,0,2,4,10,0,7,0,7,3,6,0,6,8,0,6,5,5,3,2,11,0,4,10,9,4,4,7,2,6,3,4,0,5,13,3,5,3,2,10,0,2,5,0,5,4,7,11,7,0,1,19,4,2,0,4,1,5,15,4,7,11,7,0,8,2,0,9,1,0,6,5,3,5,2,0,11,5,6,0 117 164,300,239,111,102,96,145,148,110,105,83,79,76,92,164,80,172,170,107,78,84,194,228,94,136,89,105,91,103,103,112,211,111,120,82,90,157,86,84,147,168,214,95,131,88,181,136,112,102,163,328,80,79,100,90,72,167,343,78,194,218,91,102,135,131,81,113,114,112,63,123,194,97,171,53,81,213,102,197,79,68,142,135,151,176,358,148,64,332,107,102,26,110,99,140,174,69,146,113,142,11,205,49,149,178,105,85,114,75,154,154,118,117,169,170,109,97 118 0.281599 1 chr6 31836413 31836517 + C6orf48, chr6 31836263 31836545 h38_mk_AluJb - 4 SRR1402900,SRR600361,SRR612563,SRR663633, 88 2,9,3,1,1,2,1,1,0,1,1,2,0,1,2,3,10,1,2,0,1,3,2,0,1,0,3,0,0,1,2,0,3,1,0,0,1,1,1,4,2,3,1,2,4,8,1,0,2,3,2,6,0,1,1,2,3,5,0,2,0,0,0,4,2,2,1,2,1,1,1,6,1,4,1,3,5,0,0,0,1,1,0,3,3,2,3,0,2,1,3,0,5,0,2,2,1,3,1,4,1,1,0,0,0,0,3,0,3,4,1,0,6,2,5,4,2 117 164,300,239,111,102,96,145,148,110,105,83,79,76,92,164,80,172,170,107,78,84,194,228,94,136,89,105,91,103,103,112,211,111,120,82,90,157,86,84,147,168,214,95,131,88,181,136,112,102,163,328,80,79,100,90,72,167,343,78,194,218,91,102,135,131,81,113,114,112,63,123,194,97,171,53,81,213,102,197,79,68,142,135,151,176,358,148,64,332,107,102,26,110,99,140,174,69,146,113,142,11,205,49,149,178,105,85,114,75,154,154,118,117,169,170,109,97 118 0.277875 1 chr6 31836424 31836517 + C6orf48, chr6 31836263 31836545 h38_mk_AluJb - 116 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 117,246,157,77,84,65,89,116,87,81,60,76,68,69,142,67,124,139,74,59,57,157,185,78,97,78,100,61,71,63,78,127,79,108,89,78,135,80,59,97,127,166,77,117,60,137,107,80,94,101,237,71,57,68,79,61,125,238,64,151,156,70,76,110,140,71,85,100,91,61,111,148,83,138,55,59,179,74,148,66,62,103,87,113,107,275,138,65,230,78,109,33,89,66,104,130,65,87,64,109,15,122,58,107,129,68,39,79,57,108,90,86,68,105,113,75,81 117 164,300,239,111,102,96,145,148,110,105,83,79,76,92,164,80,172,170,107,78,84,194,228,94,136,89,105,91,103,103,112,211,111,120,82,90,157,86,84,147,168,214,95,131,88,181,136,112,102,163,328,80,79,100,90,72,167,343,78,194,218,91,102,135,131,81,113,114,112,63,123,194,97,171,53,81,213,102,197,79,68,142,135,151,176,358,148,64,332,107,102,26,110,99,140,174,69,146,113,142,11,205,49,149,178,105,85,114,75,154,154,118,117,169,170,109,97 118 0.399442 1 chr6 34688841 34688933 - C6orf106, chr6 34688843 34688987 h38_mk_AluSq2 + 1 SRR1453851, 46 2,0,0,3,2,0,0,0,0,0,2,0,1,1,0,4,0,3,0,0,0,0,9,0,2,3,2,0,0,0,2,1,0,2,0,0,0,3,1,0,3,0,0,0,2,0,2,0,0,0,0,0,0,0,2,0,1,0,0,2,3,0,0,3,1,0,0,0,0,1,4,0,14,1,1,0,1,2,0,0,0,6,0,0,0,2,0,0,0,0,2,0,0,2,0,2,1,0,3,2,0,0,0,0,0,1,0,0,0,0,0,2,0,3,5,8,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,2,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.007279 1 chr6 36103578 36103811 + MAPK14, chr6 36103352 36103645 h38_mk_AluJo - 2 SRR1331579,SRR1498550, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 10 0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2 118 0.007774 1 chr6 36116359 36116421 + MAPK14, chr6 36116328 36116395 h38_mk_AluJo - 5 SRR1314163,SRR1315970,SRR1485459,SRR602704,SRR657635, 19 0,0,0,0,0,0,0,1,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,3,0,0,0,0,0,0,2,4,0,0,0,0,0,0,0,0,0,3,0,0,2,0,0,0,0,2,0,0,11,0,0,0,0,0,2,0,0,0,5,1,0 41 1,0,0,1,4,0,2,3,2,0,0,0,0,1,1,0,0,1,0,0,1,0,3,0,0,0,0,0,0,0,1,3,0,0,0,1,0,1,0,1,0,2,0,1,0,0,6,1,0,2,0,0,0,0,1,0,0,0,0,0,2,0,0,0,2,0,0,1,1,0,0,1,4,0,0,1,0,0,0,0,4,4,0,2,2,0,0,0,0,0,0,0,0,0,0,2,1,0,0,1,0,0,0,0,8,0,0,0,1,0,4,2,0,0,0,3,0 . . . chr6 43447124 43447408 + ABCC10, chr6 43446833 43447155 h38_mk_AluS - 1 SRR661349, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 117 30,4,37,62,41,34,45,43,58,37,43,18,27,32,27,36,36,26,12,13,25,20,106,20,30,11,48,48,49,28,30,79,19,41,23,20,16,26,4,69,20,45,18,49,54,38,42,20,33,36,22,33,22,46,39,30,68,21,39,41,9,25,35,49,63,29,6,15,34,47,53,49,73,23,14,27,56,50,8,36,40,30,16,46,45,49,19,16,17,21,30,3,53,30,17,62,27,23,17,48,1,45,12,36,55,37,14,20,34,46,68,50,9,47,56,45,9 . . . chr6 43633194 43633315 + MAD2L1BP, chr6 43633163 43633481 h38_mk_AluSp - 2 SRR1387809,SRR1447693, 37 0,0,1,0,0,0,0,0,1,0,0,2,1,0,0,1,0,0,0,0,1,1,0,2,0,0,2,0,0,0,1,0,0,0,0,0,1,0,0,1,0,2,0,2,0,0,0,0,1,0,2,0,0,0,0,2,2,0,1,0,0,0,0,0,0,0,1,0,1,0,0,0,2,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,2,0,1,0,0,2,4,0,1,1,0,0,1,0,0,0,0,0,2,1,1,0,0,2,0,1,0 38 2,0,0,0,0,1,0,0,0,0,0,1,3,0,1,0,0,0,0,0,2,1,2,1,1,0,1,0,0,0,0,2,0,0,0,1,0,0,0,2,1,4,0,0,2,0,1,0,0,0,2,1,0,2,0,0,0,1,0,1,0,0,0,0,0,0,1,0,2,0,0,0,0,1,1,0,0,0,1,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,3,2,4,3,0,0,0,1,0,2 . . . chr6 52481546 52481662 + EFHC1, chr6 52481531 52481820 h38_mk_AluJo - 6 SRR1084649,SRR1318163,SRR1341763,SRR1414897,SRR1453341,SRR661349, 47 0,0,5,0,0,2,0,0,4,0,0,1,2,0,0,2,1,0,0,0,1,2,2,1,1,0,0,0,0,6,2,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,2,1,1,3,0,0,0,0,2,0,3,1,0,2,1,1,0,3,4,0,0,0,3,1,1,0,1,0,0,0,0,0,2,2,0,0,0,0,0,1,3,0,2,0,0,0,0,0,0,0,0,0,1,4,0,2,0,0,0,9,1,0,1,6,1,0,0,0,0,3,0 15 0,0,3,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,1,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0 118 0.034349 1 chr6 52578269 52578594 + TRAM2-AS1, chr6 52578460 52578709 h38_mk_AluSz - 5 SRR1320963,SRR1341763,SRR1360563,SRR1464373,SRR595926, 10 0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0 90 6,0,2,3,0,1,2,5,0,8,5,0,3,4,0,4,7,3,1,0,3,3,3,2,3,4,1,5,2,3,5,0,2,1,4,5,0,3,3,2,2,4,0,4,1,8,4,1,4,1,6,4,2,0,0,2,2,0,3,4,4,3,2,11,6,1,4,1,3,0,5,0,0,0,3,4,3,0,6,0,4,5,3,3,4,4,0,1,8,2,2,0,3,2,3,0,1,4,9,2,2,1,0,0,9,5,7,0,8,7,0,4,5,4,0,5,0 . . . chr6 52578286 52578594 + TRAM2-AS1, chr6 52578460 52578709 h38_mk_AluSz - 13 SRR1072367,SRR1316940,SRR1328895,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1361567,SRR1387264,SRR1408368,SRR1440986,SRR604456, 45 1,0,0,0,1,3,0,0,0,1,0,0,0,2,3,1,0,0,3,0,0,2,3,0,0,0,1,2,1,1,2,2,2,1,1,0,0,0,1,0,1,3,0,0,0,0,0,2,0,0,0,0,1,1,2,0,2,0,0,1,2,1,0,1,3,0,0,0,0,1,0,0,2,1,0,1,2,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,3,0,0,0,0,0,0,1,0,0,0,0 90 6,0,2,3,0,1,2,5,0,8,5,0,3,4,0,4,7,3,1,0,3,3,3,2,3,4,1,5,2,3,5,0,2,1,4,5,0,3,3,2,2,4,0,4,1,8,4,1,4,1,6,4,2,0,0,2,2,0,3,4,4,3,2,11,6,1,4,1,3,0,5,0,0,0,3,4,3,0,6,0,4,5,3,3,4,4,0,1,8,2,2,0,3,2,3,0,1,4,9,2,2,1,0,0,9,5,7,0,8,7,0,4,5,4,0,5,0 101 0.956575 0 chr6 52578312 52578594 + TRAM2-AS1, chr6 52578460 52578709 h38_mk_AluSz - 1 SRR1444622, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 90 6,0,2,3,0,1,2,5,0,8,5,0,3,4,0,4,7,3,1,0,3,3,3,2,3,4,1,5,2,3,5,0,2,1,4,5,0,3,3,2,2,4,0,4,1,8,4,1,4,1,6,4,2,0,0,2,2,0,3,4,4,3,2,11,6,1,4,1,3,0,5,0,0,0,3,4,3,0,6,0,4,5,3,3,4,4,0,1,8,2,2,0,3,2,3,0,1,4,9,2,2,1,0,0,9,5,7,0,8,7,0,4,5,4,0,5,0 . . . chr6 52578502 52578594 + TRAM2-AS1, chr6 52578460 52578709 h38_mk_AluSz - 3 SRR1337412,SRR1342045,SRR661349, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0 90 6,0,2,3,0,1,2,5,0,8,5,0,3,4,0,4,7,3,1,0,3,3,3,2,3,4,1,5,2,3,5,0,2,1,4,5,0,3,3,2,2,4,0,4,1,8,4,1,4,1,6,4,2,0,0,2,2,0,3,4,4,3,2,11,6,1,4,1,3,0,5,0,0,0,3,4,3,0,6,0,4,5,3,3,4,4,0,1,8,2,2,0,3,2,3,0,1,4,9,2,2,1,0,0,9,5,7,0,8,7,0,4,5,4,0,5,0 117 0.269636 0 chr6 52578506 52578594 + TRAM2-AS1, chr6 52578460 52578709 h38_mk_AluSz - 3 SRR1435293,SRR1500868,SRR662534, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0 90 6,0,2,3,0,1,2,5,0,8,5,0,3,4,0,4,7,3,1,0,3,3,3,2,3,4,1,5,2,3,5,0,2,1,4,5,0,3,3,2,2,4,0,4,1,8,4,1,4,1,6,4,2,0,0,2,2,0,3,4,4,3,2,11,6,1,4,1,3,0,5,0,0,0,3,4,3,0,6,0,4,5,3,3,4,4,0,1,8,2,2,0,3,2,3,0,1,4,9,2,2,1,0,0,9,5,7,0,8,7,0,4,5,4,0,5,0 117 0.269571 0 chr6 73480039 73480367 + MTO1, chr6 73480253 73480579 h38_mk_AluSp - 1 SRR1317344, 4 0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 114 4,2,17,13,7,6,10,7,8,13,6,7,2,7,8,3,12,9,1,7,5,1,17,4,8,1,5,7,4,6,7,8,2,7,3,9,5,4,1,17,5,12,4,5,4,5,8,12,3,6,3,2,2,5,5,6,7,7,6,10,7,3,0,11,7,4,3,5,3,4,9,7,5,6,1,9,6,4,2,4,3,3,2,19,9,7,6,3,9,4,11,1,4,6,17,9,14,19,12,15,3,11,6,0,24,5,0,9,5,20,8,7,3,14,12,7,9 . . . chr6 73480293 73480367 + MTO1, chr6 73480253 73480579 h38_mk_AluSp - 20 SRR1084842,SRR1333741,SRR1348159,SRR1354446,SRR1356619,SRR1357478,SRR1387264,SRR1408368,SRR1433796,SRR1434526,SRR1439873,SRR1454803,SRR1464373,SRR1468955,SRR1471943,SRR1498550,SRR602314,SRR602516,SRR661349,SRR818033, 44 0,0,1,1,2,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,1,1,1,0,1,0,2,0,2,0,1,4,0,1,0,0,0,1,0,1,1,1,0,0,0,1,0,2,0,0,1,0,0,1,0,0,0,1,1,0,0,0,1,3,0,1,0,1,0,0,0,2,0,0,0,1,0,4,0,1,0,2,0,1,0,0,0,0,3,0,0,0,1,0,1,1,0,0,1,1,0,0,0,0,0,0,0,0,3,0,0,0,0,1,2,0,0 114 4,2,17,13,7,6,10,7,8,13,6,7,2,7,8,3,12,9,1,7,5,1,17,4,8,1,5,7,4,6,7,8,2,7,3,9,5,4,1,17,5,12,4,5,4,5,8,12,3,6,3,2,2,5,5,6,7,7,6,10,7,3,0,11,7,4,3,5,3,4,9,7,5,6,1,9,6,4,2,4,3,3,2,19,9,7,6,3,9,4,11,1,4,6,17,9,14,19,12,15,3,11,6,0,24,5,0,9,5,20,8,7,3,14,12,7,9 118 0.238544 1 chr6 73480997 73481116 + MTO1, chr6 73480960 73481263 h38_mk_AluSx - 7 SRR1328895,SRR1356619,SRR1357478,SRR1487194,SRR1498550,SRR599510,SRR602516, 34 0,0,0,0,0,1,1,0,0,0,1,0,1,0,0,2,0,0,0,1,0,0,0,0,0,1,0,0,2,0,2,3,0,1,0,0,2,0,0,0,1,0,0,1,0,0,2,0,0,0,0,0,0,1,1,0,2,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,2,0,1,0,0,1,0,1,1,0,0,0,1,0,2,1,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,0,0,0,7,1,0,0,0,0,0 64 0,4,2,1,1,0,0,2,3,1,2,0,0,0,1,1,0,1,0,0,0,0,3,1,1,4,0,2,1,0,2,9,0,1,1,0,0,1,0,0,2,0,1,0,1,0,1,0,1,1,0,0,0,0,1,0,2,2,1,2,0,1,2,1,2,0,0,0,0,4,0,1,0,1,3,1,3,0,0,0,1,0,1,2,2,5,0,0,6,2,0,1,1,3,1,4,0,2,2,5,0,1,1,0,3,0,0,0,1,2,0,0,0,0,1,0,0 118 0.051010 1 chr6 73481001 73481116 + MTO1, chr6 73480960 73481263 h38_mk_AluSx - 1 SRR1361567, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0 64 0,4,2,1,1,0,0,2,3,1,2,0,0,0,1,1,0,1,0,0,0,0,3,1,1,4,0,2,1,0,2,9,0,1,1,0,0,1,0,0,2,0,1,0,1,0,1,0,1,1,0,0,0,0,1,0,2,2,1,2,0,1,2,1,2,0,0,0,0,4,0,1,0,1,3,1,3,0,0,0,1,0,1,2,2,5,0,0,6,2,0,1,1,3,1,4,0,2,2,5,0,1,1,0,3,0,0,0,1,2,0,0,0,0,1,0,0 118 0.038487 1 chr6 82175904 82176026 - IBTK, chr6 82175738 82176052 h38_mk_AluSp + 89 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 117 8,3,13,10,12,5,4,4,9,5,10,7,4,2,14,4,11,11,1,1,7,4,17,9,7,6,15,5,7,6,11,9,2,5,3,8,3,4,5,12,8,7,4,4,6,2,9,4,6,2,11,8,6,4,4,3,16,2,7,8,6,2,4,11,11,2,3,10,7,11,7,1,8,6,1,11,12,4,2,7,11,17,3,13,11,15,6,2,5,4,10,1,5,12,11,8,17,3,3,7,2,4,5,1,22,11,8,3,15,11,15,15,1,5,11,14,1 108 4,0,5,9,6,4,5,5,5,2,6,2,2,3,6,11,12,4,4,0,12,2,11,5,4,0,4,4,4,4,7,4,2,7,1,1,3,3,2,10,5,6,5,3,2,4,2,2,1,1,6,6,2,1,4,2,7,9,8,5,7,4,0,11,7,1,1,5,4,1,6,0,8,8,2,1,8,4,0,5,4,3,1,6,6,5,4,1,3,2,7,3,1,6,9,2,9,6,6,4,0,2,3,1,3,9,4,6,8,14,11,4,0,9,8,7,0 118 0.222692 1 chr6 83521535 83521639 + PRSS35, chr6 83521520 83521811 h38_mk_AluJo - 5 SRR1331579,SRR1387264,SRR1416754,SRR1464373,SRR1468514, 27 0,0,1,0,0,2,0,0,0,0,0,0,0,0,3,0,3,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,1,2,1,1,0,0,0,0,1,0,0,0,1,0,0,1,1,0,0,0,1,0,0,0,0,1,1,1,0,0,0,0,0,0,1,1,6,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 43 0,0,2,0,0,1,0,0,1,0,1,0,1,0,1,0,3,0,0,0,1,0,2,0,0,0,0,1,0,0,0,0,1,0,0,1,0,1,0,0,2,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,1,1,1,0,2,1,0,2,0,0,2,1,2,5,0,1,0,0,0,1,1,0,0,3,0,1,0,0,0,0,0,0,0,2,2,0,1,0,1,0,0,3,1,0,1,2,9,0,0,0,0,0,0,0 94 0.187401 0 chr6 99383008 99383130 - COQ3, chr6 99382974 99383163 h38_mk_AluSq2 + 68 SRR1072367,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1348159,SRR1354446,SRR1356619,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1381673,SRR1386708,SRR1387264,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1421177,SRR1432123,SRR1433796,SRR1435020,SRR1439873,SRR1440986,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487362,SRR1487685,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657635,SRR658307,SRR661349,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 112 3,0,5,7,6,7,6,3,3,2,2,5,5,3,2,7,4,7,2,1,4,2,17,4,7,1,7,1,4,4,7,4,0,11,6,10,12,2,1,5,4,6,6,1,1,10,5,2,5,2,1,4,3,6,8,5,7,4,1,6,1,3,3,6,8,6,2,2,2,3,3,1,8,3,4,7,4,9,0,4,4,3,3,3,4,5,3,3,5,2,11,0,3,4,3,3,7,3,2,16,3,5,4,8,9,6,0,5,14,10,18,5,1,6,5,5,4 99 2,2,1,3,0,1,3,1,0,0,2,2,1,1,1,3,2,3,1,0,2,1,12,3,1,0,2,4,4,0,4,0,0,3,2,3,3,1,2,6,2,0,3,2,2,3,9,2,2,0,2,0,0,1,1,3,4,2,1,4,0,3,1,4,1,1,1,1,2,0,5,3,4,2,1,3,2,2,4,2,4,3,1,1,1,5,1,0,0,1,2,0,1,5,4,5,3,1,2,3,0,2,3,2,3,4,2,4,5,1,1,2,5,4,3,3,2 118 0.292126 1 chr7 100051478 100051610 + ZSCAN21, chr7 100051268 100051604 h38_mk_AluY - 72 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1316940,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1408208,SRR1408368,SRR1413562,SRR1415234,SRR1416754,SRR1418837,SRR1434526,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR601500,SRR602704,SRR604262,SRR604456,SRR614802,SRR657754,SRR658307,SRR661349,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 92 3,0,1,5,5,4,5,1,2,7,1,0,2,0,3,5,4,4,0,3,6,0,9,2,4,3,4,1,1,2,2,1,6,3,4,1,1,2,0,1,1,2,2,2,1,0,4,2,2,1,2,0,2,0,1,0,0,0,2,1,5,3,0,5,2,0,2,0,2,0,2,1,3,4,0,4,1,1,2,3,3,5,0,1,6,3,5,2,2,2,3,1,0,4,0,3,3,2,2,1,0,3,2,0,2,2,1,4,1,0,0,2,4,6,5,3,0 109 8,1,0,9,14,3,18,4,7,10,4,3,4,0,11,5,15,5,1,2,5,5,13,9,4,5,9,1,4,8,6,2,7,10,2,2,3,7,3,10,2,6,3,6,6,2,4,4,6,5,6,6,2,2,3,5,1,0,2,8,6,3,0,6,3,3,2,0,2,3,4,2,5,1,2,4,4,3,5,4,7,6,3,5,6,3,5,2,8,3,10,0,2,8,4,9,8,7,4,9,3,6,4,0,9,3,6,6,3,3,6,12,3,9,8,7,0 118 0.602038 1 chr7 100051478 100051646 + ZSCAN21, chr7 100051268 100051604 h38_mk_AluY - 16 SRR1084649,SRR1315970,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1356619,SRR1375571,SRR1387264,SRR1453851,SRR1455925,SRR1468955,SRR1474777,SRR604262,SRR614802,SRR814967, 92 3,0,1,5,5,4,5,1,2,7,1,0,2,0,3,5,4,4,0,3,6,0,9,2,4,3,4,1,1,2,2,1,6,3,4,1,1,2,0,1,1,2,2,2,1,0,4,2,2,1,2,0,2,0,1,0,0,0,2,1,5,3,0,5,2,0,2,0,2,0,2,1,3,4,0,4,1,1,2,3,3,5,0,1,6,3,5,2,2,2,3,1,0,4,0,3,3,2,2,1,0,3,2,0,2,2,1,4,1,0,0,2,4,6,5,3,0 54 0,0,2,1,1,1,0,0,3,0,1,0,1,0,0,2,1,0,0,0,1,0,7,0,0,0,1,0,1,0,1,1,1,0,0,0,1,1,1,1,2,1,0,1,1,0,0,0,0,0,0,0,1,1,0,0,1,0,1,0,1,2,0,1,0,0,0,0,0,0,2,1,3,1,0,0,0,1,0,0,1,3,1,1,0,0,0,0,0,1,0,0,1,0,2,1,1,2,0,1,0,1,2,0,0,0,0,0,0,6,2,1,0,3,0,0,2 115 0.403440 0 chr7 100051481 100051610 + ZSCAN21, chr7 100051268 100051604 h38_mk_AluY - 21 SRR1314163,SRR1317344,SRR1320115,SRR1368772,SRR1386708,SRR1399779,SRR1402900,SRR1414897,SRR1416477,SRR1421177,SRR1432123,SRR1435020,SRR1453341,SRR1454803,SRR1500868,SRR602314,SRR602516,SRR607337,SRR613627,SRR657635,SRR661973, 48 1,0,0,1,3,1,2,2,0,2,1,0,3,0,0,0,1,3,0,1,0,0,0,0,1,0,1,0,0,1,1,0,3,0,0,0,4,0,0,1,0,0,1,0,1,2,0,0,0,1,0,2,0,0,0,1,1,0,0,2,0,2,0,1,1,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,2,0,0,0,1,0,1,0,1,2,1,0,0,0,2,4,0,0,0,1,0,3,0,0,2,0,0,1,0,2,0,0,0,1,1,0,0 109 8,1,0,9,14,3,18,4,7,10,4,3,4,0,11,5,15,5,1,2,5,5,13,9,4,5,9,1,4,8,6,2,7,10,2,2,3,7,3,10,2,6,3,6,6,2,4,4,6,5,6,6,2,2,3,5,1,0,2,8,6,3,0,6,3,3,2,0,2,3,4,2,5,1,2,4,4,3,5,4,7,6,3,5,6,3,5,2,8,3,10,0,2,8,4,9,8,7,4,9,3,6,4,0,9,3,6,6,3,3,6,12,3,9,8,7,0 118 0.551926 1 chr7 100051481 100051646 + ZSCAN21, chr7 100051268 100051604 h38_mk_AluY - 4 SRR1317344,SRR1500868,SRR602314,SRR661973, 48 1,0,0,1,3,1,2,2,0,2,1,0,3,0,0,0,1,3,0,1,0,0,0,0,1,0,1,0,0,1,1,0,3,0,0,0,4,0,0,1,0,0,1,0,1,2,0,0,0,1,0,2,0,0,0,1,1,0,0,2,0,2,0,1,1,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,2,0,0,0,1,0,1,0,1,2,1,0,0,0,2,4,0,0,0,1,0,3,0,0,2,0,0,1,0,2,0,0,0,1,1,0,0 54 0,0,2,1,1,1,0,0,3,0,1,0,1,0,0,2,1,0,0,0,1,0,7,0,0,0,1,0,1,0,1,1,1,0,0,0,1,1,1,1,2,1,0,1,1,0,0,0,0,0,0,0,1,1,0,0,1,0,1,0,1,2,0,1,0,0,0,0,0,0,2,1,3,1,0,0,0,1,0,0,1,3,1,1,0,0,0,0,0,1,0,0,1,0,2,1,1,2,0,1,0,1,2,0,0,0,0,0,0,6,2,1,0,3,0,0,2 113 0.244939 0 chr7 100118396 100118649 - TAF6, chr7 100118376 100118686 h38_mk_AluJ + 1 SRR814967, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0 114 2,0,6,21,6,7,12,9,11,4,12,11,9,11,21,11,11,20,5,3,13,6,37,8,10,15,9,11,17,6,8,8,0,8,4,7,12,9,5,4,12,10,8,18,8,9,12,5,5,4,3,8,10,3,13,4,8,4,12,21,15,6,1,17,18,5,3,8,7,6,18,7,20,12,3,12,26,3,2,10,3,10,7,12,17,5,6,2,2,8,21,1,14,14,16,15,13,5,18,17,1,17,8,0,12,16,4,4,15,19,18,15,1,13,16,22,1 118 0.328590 1 chr7 100118518 100118649 - TAF6, chr7 100118376 100118686 h38_mk_AluJ + 106 SRR1072367,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 114 8,1,1,27,18,17,13,16,14,5,19,15,10,20,34,9,9,28,3,7,22,9,73,12,14,19,23,7,18,11,7,22,7,14,11,9,22,27,17,17,21,19,18,30,11,24,23,10,10,14,9,20,7,7,16,10,20,9,17,28,29,7,6,27,36,14,4,18,9,8,18,6,26,22,10,17,29,12,4,30,12,18,5,25,18,12,10,2,10,8,31,2,9,21,28,25,22,9,23,33,0,29,7,0,35,24,10,19,16,22,22,24,0,42,30,34,3 114 2,0,6,21,6,7,12,9,11,4,12,11,9,11,21,11,11,20,5,3,13,6,37,8,10,15,9,11,17,6,8,8,0,8,4,7,12,9,5,4,12,10,8,18,8,9,12,5,5,4,3,8,10,3,13,4,8,4,12,21,15,6,1,17,18,5,3,8,7,6,18,7,20,12,3,12,26,3,2,10,3,10,7,12,17,5,6,2,2,8,21,1,14,14,16,15,13,5,18,17,1,17,8,0,12,16,4,4,15,19,18,15,1,13,16,22,1 118 0.559430 1 chr7 100354564 100354617 + STAG3L5P-PVRIG2P-PILRB, chr7 100354383 100354691 h38_mk_AluSx - 2 SRR1487685,SRR602314, 37 0,0,0,0,2,1,2,0,3,0,0,0,0,0,0,0,1,0,0,0,0,2,1,0,2,0,0,0,3,0,0,6,0,0,0,0,1,0,0,2,0,0,0,0,3,3,4,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,1,0,0,1,0,2,3,0,0,2,0,2,3,0,0,0,0,5,0,1,0,0,4,1,0,0,1,0,0,1,6,1,0,0,1,0,0,2,0,0,0,1,0,0,0,0,0,2,0,3,0,0,0 27 0,0,0,0,0,0,0,0,0,3,0,0,0,3,1,0,0,0,0,0,0,1,4,0,0,0,2,0,0,2,2,0,0,0,2,1,0,0,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,0,0,0,7,0,0,4,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,0,4,0,0,0,2,1,1,5,0,0,4,0,0,0,0,0,0,0,6,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,2,0 118 0.011049 1 chr7 100880696 100880769 + SRRT, chr7 100880667 100880780 h38_mk_AluJb - 9 SRR1317344,SRR1341763,SRR1356444,SRR1402900,SRR1468955,SRR1471943,SRR1474777,SRR600361,SRR814967, 33 1,0,0,0,3,0,0,1,1,0,3,0,0,3,0,0,0,0,0,1,0,0,0,0,2,1,3,0,0,4,0,1,2,0,0,0,0,0,0,0,0,2,0,0,0,3,0,0,0,0,3,0,0,0,0,0,2,0,1,2,1,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,3,0,2,0,3,0,0,0,2,0,0,0,0,0,0,7,0,0,2,2,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,3,3,0,0 87 2,3,4,4,2,2,2,1,4,2,5,1,0,0,3,6,11,0,0,0,3,4,5,8,4,3,2,0,2,6,3,2,0,5,2,1,0,0,1,3,0,5,3,2,0,2,3,0,6,3,5,4,0,0,2,4,0,2,5,3,0,0,2,6,5,3,4,1,3,2,2,0,0,2,4,3,3,3,3,4,0,4,0,5,1,0,4,1,3,0,3,0,5,4,0,1,5,6,0,4,0,7,2,0,8,10,0,4,6,11,7,4,0,8,4,3,3 118 0.084635 1 chr7 1162352 1162728 + AC091729.3, chr7 1162567 1162881 h38_mk_AluSq2 - 2 SRR1320963,SRR1337412, 86 3,4,4,1,0,10,0,2,11,8,26,6,0,1,4,8,9,12,0,2,7,6,7,9,11,0,8,14,11,34,12,0,7,15,5,0,22,0,0,9,7,5,2,15,9,2,0,0,8,0,0,1,1,0,10,1,1,7,0,14,0,6,0,9,12,2,7,2,1,0,5,1,11,3,0,13,0,10,2,13,1,2,1,0,5,11,2,5,21,7,4,0,0,0,9,8,6,0,2,13,0,0,4,0,7,1,0,6,8,11,0,1,7,6,8,12,0 6 0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 114 0.431300 0 chr7 1162635 1162891 + AC091729.3, chr7 1162567 1162881 h38_mk_AluSq2 - 3 SRR1341763,SRR1356444,SRR1439873, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 58 0,0,0,1,0,1,1,0,0,2,5,0,0,1,3,3,1,1,0,0,2,0,0,4,1,0,2,0,2,1,0,0,0,5,0,0,0,1,0,2,3,2,1,3,4,0,1,0,0,0,0,0,1,1,0,1,0,0,1,5,0,9,0,5,2,0,0,1,0,0,0,0,5,3,0,1,1,1,0,3,3,0,0,0,2,2,0,0,0,2,0,0,1,0,0,1,3,0,1,1,1,0,1,0,6,0,0,0,2,0,2,1,2,2,0,5,0 69 0.769807 0 chr7 1162769 1162891 + AC091729.3, chr7 1162567 1162881 h38_mk_AluSq2 - 19 SRR1317344,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1354446,SRR1387264,SRR1390601,SRR1435020,SRR1435775,SRR1455925,SRR1464373,SRR1471943,SRR602704,SRR657635,SRR661349,SRR663633,SRR814967,SRR818210, 62 0,0,1,0,0,0,0,1,2,2,4,0,1,1,4,2,3,1,0,0,1,1,2,3,2,0,2,0,2,3,2,0,1,3,0,0,4,0,0,2,2,2,1,2,1,0,0,0,2,0,0,0,0,0,1,1,0,0,0,2,0,1,0,4,3,0,3,0,0,1,1,0,3,0,0,3,2,0,0,4,0,0,0,0,0,1,1,1,1,2,3,0,0,0,0,2,2,1,3,1,0,0,0,0,3,0,0,4,5,10,0,0,2,4,3,8,0 58 0,0,0,1,0,1,1,0,0,2,5,0,0,1,3,3,1,1,0,0,2,0,0,4,1,0,2,0,2,1,0,0,0,5,0,0,0,1,0,2,3,2,1,3,4,0,1,0,0,0,0,0,1,1,0,1,0,0,1,5,0,9,0,5,2,0,0,1,0,0,0,0,5,3,0,1,1,1,0,3,3,0,0,0,2,2,0,0,0,2,0,0,1,0,0,1,3,0,1,1,1,0,1,0,6,0,0,0,2,0,2,1,2,2,0,5,0 86 0.880754 0 chr7 124026401 124026721 + AC004690.2, chr7 124026366 124026676 h38_mk_AluJ - 1 SRR1415234, 7 2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0 17 0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0 . . . chr7 124028570 124028722 + AC004690.2, chr7 124028383 124028693 h38_mk_AluJ4 - 2 SRR1415234,SRR1447693, 17 0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0 10 3,0,0,1,0,2,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0 . . . chr7 124848540 124848659 - POT1, chr7 124848373 124848695 h38_mk_AluSx1 + 12 SRR1084842,SRR1387809,SRR1416477,SRR1416754,SRR1432123,SRR1435020,SRR1468514,SRR1487362,SRR1487685,SRR1500868,SRR657635,SRR657754, 57 0,0,1,2,0,1,0,0,1,0,0,2,0,0,1,0,1,2,0,0,1,0,3,2,1,1,1,0,3,1,1,0,0,1,0,0,1,0,0,0,0,2,0,3,0,0,3,1,1,2,0,2,1,0,0,0,5,0,1,2,0,1,0,1,0,0,0,0,1,0,1,0,1,0,0,3,2,0,0,1,0,0,0,1,1,2,1,0,0,4,0,0,0,1,1,1,0,1,0,0,2,2,1,0,3,4,0,0,1,3,3,0,0,1,1,0,0 51 0,1,0,2,1,0,1,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,2,0,0,0,0,1,0,0,1,1,0,2,0,1,0,0,0,4,0,0,1,0,0,0,2,1,0,2,1,0,2,0,1,0,0,2,1,0,1,0,0,1,0,1,0,0,0,0,2,1,1,1,1,0,0,1,0,0,1,1,2,1,3,0,1,1,3,0,0,2,0,0,1,0,0,1,0,1,0,0,4,1,0,1,0,1,0,0,0,4,2,0,2 115 0.100495 0 chr7 128622979 128623132 + AC090114.3, chr7 128622947 128623266 h38_mk_AluSc8 - 3 SRR1440986,SRR1476571,SRR657754, 12 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0 81 1,2,6,1,0,1,0,7,2,2,0,4,1,3,5,5,4,0,2,5,0,2,4,1,2,2,7,6,4,2,5,1,0,6,1,0,0,0,0,5,2,11,1,1,4,1,0,0,1,1,7,1,0,0,0,4,13,0,0,0,0,2,0,1,1,0,0,1,2,0,2,5,1,2,1,0,4,0,0,1,9,1,1,6,3,1,1,0,2,1,0,0,0,6,1,1,0,0,1,8,1,3,0,0,1,10,1,0,6,7,20,4,0,20,4,12,3 117 0.160828 0 chr7 130914962 130915102 + LINC00513, chr7 130914881 130915086 h38_mk_AluJb - 1 SRR1331579, 4 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 12 0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,1,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr7 131510236 131510331 - PODXL, chr7 131510204 131510521 h38_mk_AluSx3 + 99 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1434526,SRR1435020,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 110 18,7,7,14,4,10,20,9,0,15,9,14,5,6,10,3,10,6,23,3,13,4,15,3,15,17,23,4,6,12,8,2,9,0,9,2,4,2,4,8,17,21,0,5,3,8,6,1,4,14,2,8,14,8,10,0,10,2,7,7,1,3,1,12,4,5,3,1,3,3,14,3,5,7,2,7,33,3,3,6,6,5,6,11,17,14,15,0,24,6,15,14,8,4,12,10,17,5,7,15,4,11,11,0,20,18,3,16,8,25,5,43,0,2,9,24,16 112 18,6,8,8,11,11,16,8,1,11,7,7,3,0,11,2,6,3,12,10,9,1,10,5,9,23,19,1,4,2,12,2,3,2,2,2,3,2,3,8,22,12,3,7,7,3,2,1,3,1,1,1,10,5,7,2,10,0,9,4,0,0,1,6,4,3,3,2,5,3,10,2,1,16,2,6,24,4,4,2,3,1,0,10,16,15,7,1,23,6,17,9,4,4,7,4,10,7,8,16,4,15,8,1,1,36,5,3,8,12,5,40,1,3,10,14,12 118 0.339019 1 chr7 140360221 140360336 - SLC37A3, chr7 140360055 140360355 h38_mk_AluJ + 1 SRR1498550, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.007879 0 chr7 149128823 149128944 + ZNF398, chr7 149128803 149129109 h38_mk_AluS - 3 SRR1399779,SRR1418127,SRR1468514, 34 0,1,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,1,0,0,1,1,2,1,0,1,1,0,3,0,0,2,2,0,0,0,1,1,1,0,0,1,1,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,1,1,0,0,2,0,0,0 27 0,0,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,1,0,0,2,0,1,1,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,2,1,0,1,1,0,0,1,1,0,1,0,0,0,1,0,0,1,0,0,0,0,0,0,1,1,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0 . . . chr7 149552141 149552234 - ZNF767P, chr7 149552109 149552359 h38_mk_AluJ4 + 1 SRR1433796, 9 0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr7 151051669 151051901 + ABCB8, chr7 151051580 151051714 h38_mk_AluJ - 1 SRR1389979, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 77,18,47,88,35,71,92,60,107,244,56,60,38,64,95,62,24,86,36,34,57,73,167,91,60,22,82,56,52,63,65,181,18,73,50,67,33,27,45,129,72,112,38,73,94,99,61,65,67,58,75,80,37,51,72,58,120,87,72,60,26,49,76,73,134,55,15,24,88,104,73,101,77,65,27,34,112,92,11,70,40,91,58,81,77,68,40,54,26,41,65,10,74,52,62,49,44,38,41,86,11,61,32,172,97,112,52,60,51,56,97,49,88,73,115,70,36 . . . chr7 156438833 156438995 - AC073133.2, chr7 156438874 156439213 h38_mk_AluJb + 1 SRR1432123, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 96 2,9,2,3,0,3,5,3,4,1,0,2,2,1,2,3,0,3,3,4,2,3,19,4,2,2,6,0,4,2,3,4,0,0,2,1,3,4,1,3,1,4,1,3,2,2,0,1,2,1,2,1,3,4,1,1,3,1,1,0,0,1,0,4,1,1,2,1,3,2,6,0,5,2,2,2,4,5,1,1,1,4,3,3,0,3,0,3,7,2,2,0,1,3,1,2,1,0,0,4,1,1,0,4,2,0,0,0,2,6,3,1,2,4,1,4,0 . . . chr7 156834478 156834575 - LMBR1, chr7 156834309 156834622 h38_mk_AluJo + 5 SRR1434526,SRR601500,SRR661349,SRR814967,SRR818033, 22 0,0,0,7,0,2,3,0,0,0,3,0,0,0,0,3,0,0,0,0,0,0,8,0,0,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,1,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,9,1,1,0,3,3,0,0,0,3,4,0,0 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,1,4,0 116 0.024466 0 chr7 156834478 156834595 - LMBR1, chr7 156834309 156834622 h38_mk_AluJo + 2 SRR1099499,SRR1368772, 22 0,0,0,7,0,2,3,0,0,0,3,0,0,0,0,3,0,0,0,0,0,0,8,0,0,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,1,0,1,0,0,3,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,9,1,1,0,3,3,0,0,0,3,4,0,0 15 0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,1,2,0,0,0,1,0 116 0.023266 0 chr7 158641431 158641554 - NCAPG2, chr7 158641421 158641599 h38_mk_AluJo + 9 SRR1337098,SRR1368772,SRR1390601,SRR1402900,SRR1432123,SRR1447693,SRR1464373,SRR1487685,SRR658307, 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12,0,0,0,0,0,0,0,0,0 108 4,0,0,6,2,3,3,2,4,3,6,2,2,5,3,3,2,11,2,0,6,3,16,2,3,2,7,1,6,4,6,6,1,6,4,3,7,3,0,8,7,6,1,6,4,6,1,1,1,0,2,4,4,2,3,3,7,3,3,4,7,6,5,11,5,0,2,2,6,3,6,3,6,2,2,4,5,3,1,4,5,5,2,3,5,3,4,2,2,2,7,0,6,2,5,2,4,0,1,6,0,5,2,23,8,9,2,13,2,6,9,7,1,8,8,4,2 118 0.230937 1 chr7 159021673 159021797 + LINC00689, chr7 159021639 159021961 h38_mk_AluSx - 1 SRR658307, 33 0,1,1,1,0,0,0,1,0,1,1,0,0,1,0,0,3,0,0,0,1,0,1,0,0,0,1,1,1,0,2,0,3,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,1,0,0,0,0,0,0,0,1,1,2,0,0,0,0,1,0,2,1,0,0,1,4,0,0,0,0,0,0,0,1,0,0,3,0,1,0,0,0,0,0,3,0,0,0,2,0,0,0,0,0 12 0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0 . . . chr7 1688058 1688150 + ELFN1, chr7 1687875 1688182 h38_mk_AluJ - 1 SRR1487194, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 74 0,0,1,2,1,1,1,2,1,0,4,3,0,1,1,1,3,2,1,0,1,1,7,0,2,3,0,2,3,0,1,0,3,2,0,1,3,3,0,0,0,0,0,6,0,2,1,0,0,0,0,0,2,1,3,2,1,0,1,0,2,0,2,3,1,2,0,0,1,0,1,0,2,1,1,5,2,1,0,1,2,2,1,2,1,0,2,0,1,2,2,0,1,6,1,6,2,0,0,0,0,0,0,3,3,0,0,0,1,0,2,2,0,2,4,2,4 . . . chr7 23199143 23199542 + NUPL2, chr7 23199106 23199361 h38_mk_AluJo - 10 SRR1099499,SRR1315970,SRR1390601,SRR1447693,SRR1474553,SRR1474777,SRR657754,SRR658307,SRR661349,SRR814967, 11 0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,2,0,1,1,0,0,0,0,1,0,0,0 117 35,11,53,97,61,57,65,48,57,38,46,36,60,47,47,44,75,72,38,24,61,37,221,41,69,36,63,49,52,76,64,57,28,64,27,56,56,47,23,90,65,73,53,56,41,68,73,31,47,61,54,53,35,55,42,45,97,37,42,54,42,49,36,69,91,40,38,35,68,47,65,33,63,51,32,59,58,64,41,49,58,80,50,67,50,81,31,27,28,19,79,14,55,70,61,64,69,55,56,59,5,67,38,34,97,106,32,45,86,201,99,81,54,99,114,130,50 . . . chr7 2548438 2548496 - BRAT1, chr7 2548407 2548690 h38_mk_AluJ + 3 SRR1320115,SRR1434526,SRR604456, 49 0,0,0,0,1,1,0,0,1,2,0,2,2,0,2,1,0,1,0,0,1,1,2,0,0,0,0,1,2,2,0,0,0,4,0,0,0,1,0,0,1,2,0,0,0,1,1,1,1,0,1,0,0,1,0,1,0,0,1,1,1,0,0,0,1,0,1,0,0,2,1,0,0,0,0,1,0,1,0,0,0,0,0,0,2,5,1,0,2,0,0,0,1,1,1,1,1,1,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,2,0 19 0,0,0,0,0,1,0,0,1,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,2,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0 118 0.033239 1 chr7 28185670 28185752 + JAZF1-AS1, chr7 28185448 28185776 h38_mk_AluJb - 96 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 113 1,2,6,13,15,11,11,6,8,3,9,6,2,4,16,12,7,10,4,2,8,1,41,7,12,2,16,6,16,6,12,6,3,13,2,5,12,6,1,11,7,6,4,13,10,3,19,3,1,12,3,10,5,7,2,10,12,3,9,8,4,15,5,26,6,2,0,1,4,3,9,12,24,1,2,5,13,3,3,9,11,11,2,10,9,8,4,1,1,10,16,0,9,12,9,16,18,8,4,11,0,3,7,3,4,15,1,1,9,10,18,19,3,19,16,18,0 103 2,5,1,6,6,3,7,3,7,2,7,8,1,2,2,5,1,5,0,1,2,4,17,3,5,3,4,4,8,1,2,10,3,9,5,3,7,4,0,7,10,0,1,1,5,7,8,2,2,9,3,6,3,7,0,3,2,0,0,2,2,8,5,10,8,2,1,1,3,0,5,0,13,5,0,2,5,3,0,3,6,5,2,8,2,5,3,1,5,5,8,0,7,11,7,23,9,5,3,3,0,5,4,0,3,3,1,2,6,8,8,15,1,3,3,11,0 114 0.990076 0 chr7 39779271 39779385 + LINC00265, chr7 39779248 39779552 h38_mk_AluJ - 101 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 116 6,1,12,21,3,19,16,2,16,8,12,7,4,6,10,6,17,5,11,2,10,9,15,11,6,7,13,4,6,7,6,6,3,5,6,4,3,10,5,9,4,11,7,11,19,14,7,6,4,6,8,5,4,5,8,5,15,4,11,6,2,2,4,15,15,8,6,3,9,13,7,2,16,11,6,6,25,2,2,8,11,8,4,11,15,5,11,6,5,4,11,4,10,18,11,8,20,9,2,7,1,8,11,0,16,15,10,13,22,26,37,9,2,18,8,26,9 112 4,0,9,18,7,8,14,6,3,5,13,4,5,3,9,12,6,5,3,1,11,0,19,4,1,5,13,5,8,4,7,5,2,5,3,3,3,8,4,8,5,1,4,8,15,6,11,2,4,9,3,6,2,5,5,5,16,2,3,5,1,4,4,10,14,10,2,1,11,8,5,2,15,7,1,6,17,6,0,10,5,14,5,4,13,3,5,1,3,3,11,2,10,14,4,5,16,1,2,6,0,7,2,15,13,18,1,6,20,14,15,13,0,17,5,9,3 . . . chr7 39780503 39780624 + LINC00265, chr7 39780470 39780797 h38_mk_AluJb - 90 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 112 4,0,9,18,7,8,14,6,3,5,13,4,5,3,9,12,6,5,3,1,11,0,19,4,1,5,13,5,8,4,7,5,2,5,3,3,3,8,4,8,5,1,4,8,15,6,11,2,4,9,3,6,2,5,5,5,16,2,3,5,1,4,4,10,14,10,2,1,11,8,5,2,15,7,1,6,17,6,0,10,5,14,5,4,13,3,5,1,3,3,11,2,10,14,4,5,16,1,2,6,0,7,2,15,13,18,1,6,20,14,15,13,0,17,5,9,3 102 1,0,2,8,1,3,3,6,2,1,2,3,4,2,3,4,9,3,4,0,3,4,10,0,1,1,6,2,1,4,2,6,0,3,6,3,2,3,0,6,6,2,3,6,7,2,2,2,3,2,1,7,3,3,5,3,4,1,2,5,0,1,3,3,6,6,2,0,2,0,3,0,10,5,2,3,7,0,1,9,6,2,2,3,3,1,7,0,4,2,4,0,1,7,2,3,5,2,2,4,0,4,2,0,5,8,3,0,2,7,8,8,1,10,4,8,1 . . . chr7 39781235 39781351 + LINC00265, chr7 39781203 39781509 h38_mk_AluJb - 84 SRR1072367,SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1408208,SRR1408368,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 102 1,0,2,8,1,3,3,6,2,1,2,3,4,2,3,4,9,3,4,0,3,4,10,0,1,1,6,2,1,4,2,6,0,3,6,3,2,3,0,6,6,2,3,6,7,2,2,2,3,2,1,7,3,3,5,3,4,1,2,5,0,1,3,3,6,6,2,0,2,0,3,0,10,5,2,3,7,0,1,9,6,2,2,3,3,1,7,0,4,2,4,0,1,7,2,3,5,2,2,4,0,4,2,0,5,8,3,0,2,7,8,8,1,10,4,8,1 105 2,3,0,11,0,2,4,6,4,5,6,4,0,1,5,3,5,6,5,1,3,5,13,2,6,0,10,11,2,5,2,10,2,4,0,5,1,6,2,9,4,4,3,5,4,0,6,1,2,1,1,2,2,4,2,1,8,3,1,8,0,0,2,6,6,2,2,3,1,2,3,1,4,6,2,1,9,2,0,8,6,5,2,7,6,1,5,1,5,4,7,1,2,7,4,6,12,3,3,10,0,5,0,0,13,2,1,2,6,12,13,7,2,14,9,8,2 . . . chr7 39788482 39788604 + LINC00265, chr7 39788446 39788733 h38_mk_AluJ - 104 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 112 10,0,7,12,18,14,6,5,8,10,13,8,4,11,16,12,13,4,6,0,12,7,13,15,10,6,13,3,4,7,12,10,1,9,11,5,0,6,0,15,3,14,8,17,8,16,12,5,11,12,12,10,6,12,11,8,16,8,10,8,5,7,10,13,14,13,3,7,16,18,7,2,12,7,4,7,26,14,1,13,7,16,8,13,12,7,9,1,6,7,23,5,11,16,14,5,26,8,11,13,2,9,3,0,16,22,6,4,15,50,22,15,9,35,12,15,10 115 4,0,8,11,7,15,13,7,5,7,10,4,4,4,9,8,4,8,7,4,10,12,15,15,7,4,13,6,5,7,7,16,4,8,2,5,1,4,2,11,4,13,8,7,5,11,8,4,7,8,5,4,7,6,11,3,24,7,11,9,1,1,9,6,12,15,5,4,8,8,6,4,12,5,3,6,16,9,1,11,9,13,3,8,7,15,5,6,5,4,18,1,6,11,7,5,18,4,2,5,0,11,5,8,12,22,6,27,7,19,14,16,3,27,9,16,2 . . . chr7 39789354 39789544 + LINC00265, chr7 39789311 39789519 h38_mk_AluJb - 108 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 115 4,0,8,11,7,15,13,7,5,7,10,4,4,4,9,8,4,8,7,4,10,12,15,15,7,4,13,6,5,7,7,16,4,8,2,5,1,4,2,11,4,13,8,7,5,11,8,4,7,8,5,4,7,6,11,3,24,7,11,9,1,1,9,6,12,15,5,4,8,8,6,4,12,5,3,6,16,9,1,11,9,13,3,8,7,15,5,6,5,4,18,1,6,11,7,5,18,4,2,5,0,11,5,8,12,22,6,27,7,19,14,16,3,27,9,16,2 115 8,0,16,35,9,18,18,20,14,15,14,11,9,13,19,8,11,10,16,3,13,12,12,18,17,4,27,8,10,7,18,10,3,22,11,8,5,13,6,22,10,17,13,17,27,21,27,5,10,15,10,14,8,18,14,12,36,5,15,11,5,5,6,17,35,20,8,4,20,15,13,6,26,18,7,21,42,26,2,24,12,29,7,7,14,14,22,1,10,9,25,9,23,17,23,7,23,7,14,24,2,17,9,30,26,26,14,20,20,59,35,25,0,39,12,19,24 . . . chr7 43760017 43760110 + BLVRA, chr7 43759979 43760208 h38_mk_AluSc - 93 SRR1072367,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1333741,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1361567,SRR1367943,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416754,SRR1418127,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 103 4,0,0,4,4,2,6,2,4,2,6,4,4,2,5,2,0,4,1,0,6,2,9,4,8,3,3,5,10,4,5,4,2,1,4,6,11,0,1,6,6,7,4,2,7,5,3,3,1,4,1,2,2,2,0,4,7,1,4,13,2,2,2,10,5,1,4,1,2,1,4,3,6,4,4,3,10,4,0,6,3,3,2,5,7,7,5,0,0,2,13,0,3,8,6,3,5,4,1,4,0,2,5,0,7,8,0,0,7,6,9,6,4,10,5,4,4 115 3,0,3,9,4,2,3,4,9,5,11,6,4,7,11,1,6,12,4,2,8,4,34,5,12,6,8,5,16,4,14,13,4,9,5,11,14,2,1,17,7,7,5,11,6,12,18,7,2,5,4,3,4,5,2,7,10,3,7,11,4,4,5,17,16,4,3,3,4,1,7,3,13,7,1,6,9,7,3,8,5,5,3,5,21,13,6,1,3,2,16,0,5,14,11,9,12,3,5,5,1,9,6,6,4,9,2,3,6,6,18,11,3,12,5,13,3 118 0.171063 1 chr7 45728832 45729026 - SEPT7P2, chr7 45728901 45729220 h38_mk_AluY + 1 SRR1439873, 113 7,15,7,14,4,12,26,3,9,10,13,14,4,8,13,7,7,5,5,11,14,14,33,15,15,7,20,10,12,4,12,17,3,0,5,7,3,6,0,12,10,13,10,15,17,9,17,7,20,19,23,7,6,7,11,9,14,11,7,13,7,8,3,18,5,7,5,7,7,12,10,8,8,10,3,4,16,13,10,11,5,20,2,12,16,22,6,0,15,6,14,3,7,9,6,24,19,5,3,11,0,8,2,28,10,19,7,5,12,44,13,6,8,21,16,8,3 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.227345 1 chr7 48018499 48018596 - SUN3, chr7 48018371 48018647 h38_mk_AluSc + 2 SRR1340508,SRR657754, 23 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,3,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,3,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,3,0,0,0,0,1,2,0,2,0,0,0 21 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,1,0,1,0,1,0,0,0,0,0,1,0,0,2,1,1,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,2 . . . chr7 5070027 5070193 + RBAK, chr7 5069827 5070145 h38_mk_AluJo - 1 SRR1399779, 12 0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,2,0,0,0,0,0,0,0,0,1,0,0,2,0,0,2,1,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 27 0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,3,1,0,0,2,1,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,2,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,3,3,4,0,0,0,0,0,0,5,0,0,0,0,2,0,0,0,2,1,2,2,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0 . . . chr7 56033381 56033494 - PSPH, chr7 56033201 56033537 h38_mk_AluSx1 + 110 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 114 8,4,2,14,18,13,12,4,10,5,12,6,9,7,8,14,10,11,4,8,11,8,24,11,10,7,12,11,8,15,13,4,3,10,8,8,16,11,6,17,9,13,14,11,7,3,17,8,11,4,9,13,6,2,10,10,11,8,5,14,21,8,2,24,15,6,8,8,14,4,20,10,11,17,6,13,13,4,11,14,14,9,11,18,19,6,17,1,15,6,13,0,10,15,12,19,16,16,13,14,0,15,5,0,20,7,2,4,13,12,14,13,13,18,23,20,3 111 5,0,6,18,4,8,12,4,7,5,5,7,6,6,11,8,8,9,0,4,13,2,30,11,14,5,5,6,11,9,5,6,1,11,1,10,6,15,3,7,7,7,14,5,7,5,14,6,3,4,2,8,5,9,3,7,7,7,9,12,14,7,2,14,12,7,6,5,2,3,10,10,6,9,4,11,12,2,7,13,6,10,5,15,7,3,8,1,23,5,8,0,13,5,3,15,11,5,10,4,0,11,4,0,11,8,0,2,10,8,9,6,3,7,19,15,3 117 0.593774 0 chr7 56043148 56043261 - PSPH, chr7 56042976 56043289 h38_mk_AluSx + 82 SRR1072367,SRR1084842,SRR1085495,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1318163,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1337098,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418127,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657754,SRR661349,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 102 6,0,0,7,2,3,4,5,4,3,1,2,1,3,6,6,3,0,0,2,5,1,11,1,5,2,2,5,3,3,4,4,3,6,2,6,2,5,0,2,4,6,2,2,3,3,3,2,2,3,4,1,0,4,1,0,5,2,2,1,9,5,0,9,3,0,3,2,3,0,4,3,6,3,2,4,4,1,4,7,5,5,2,5,10,3,2,0,3,2,3,1,2,1,3,6,6,4,6,7,0,4,0,0,2,8,2,2,4,3,5,6,0,3,7,6,4 108 6,2,3,5,6,1,3,2,3,5,4,2,1,5,7,3,3,3,3,2,4,0,17,5,6,0,2,5,6,5,2,0,1,6,2,8,3,6,1,3,4,8,2,6,3,5,5,1,3,4,11,1,2,3,4,2,2,3,2,3,5,6,0,4,5,2,2,4,5,1,7,6,6,5,1,7,5,2,7,1,3,2,3,9,2,2,1,0,8,3,6,0,2,5,4,3,7,1,5,9,0,3,1,0,7,6,0,1,1,1,8,3,2,6,6,8,2 112 0.634214 0 chr7 65088805 65088941 + GTF2IP14, chr7 65088782 65089086 h38_mk_AluSc - 16 SRR1084842,SRR1085495,SRR1099499,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1348159,SRR1387809,SRR1408208,SRR1435020,SRR1439873,SRR1468514,SRR595926,SRR602516,SRR661349, 53 1,0,3,1,2,1,0,0,1,0,1,0,0,1,3,2,2,0,2,0,0,1,2,0,3,0,2,0,0,0,1,0,0,1,0,2,0,0,0,0,0,1,0,0,2,0,4,0,0,0,2,3,1,2,1,2,0,0,0,1,0,0,0,2,0,1,0,0,0,0,2,1,0,0,0,1,4,1,0,1,2,0,0,0,2,0,0,2,0,0,3,0,0,1,0,9,0,1,0,1,1,0,0,0,10,0,0,2,3,3,1,0,0,0,1,0,3 61 2,0,2,4,2,2,0,0,2,0,2,0,1,3,4,2,4,0,1,1,0,0,0,0,1,1,3,0,0,0,0,0,0,1,1,1,0,0,1,0,2,1,0,0,0,1,3,0,0,0,1,1,1,0,0,1,5,0,0,4,0,1,0,2,2,1,0,0,2,0,1,3,0,0,0,2,1,2,0,0,3,1,1,1,1,1,0,1,0,0,1,0,0,0,1,2,5,2,1,0,0,0,0,0,4,0,0,0,3,4,3,1,0,3,3,0,0 73 0.997717 0 chr7 65726771 65726944 - AC073107.1, chr7 65726856 65726973 h38_mk_AluSx + 1 SRR1316940, 106 6,0,2,6,3,3,4,2,4,1,3,2,3,3,1,2,17,5,1,2,1,2,11,1,4,5,3,2,0,2,3,2,2,1,4,1,1,4,0,0,3,6,1,2,3,3,10,2,5,1,6,2,3,3,2,1,3,4,6,5,3,1,2,6,11,3,2,2,6,1,2,1,13,1,0,5,3,1,5,1,3,1,4,6,3,2,5,1,11,3,11,0,0,1,2,10,7,5,3,4,0,4,2,16,1,8,1,8,2,0,0,2,0,1,3,4,7 115 9,17,8,12,3,6,4,6,6,3,10,4,3,0,13,5,8,8,1,4,8,8,21,8,4,2,6,5,5,7,4,5,4,8,7,3,3,8,2,4,6,6,4,7,5,6,3,3,4,6,12,7,3,4,3,1,9,12,6,4,7,5,3,7,5,6,4,6,7,2,5,3,10,1,3,4,9,3,5,9,5,5,5,2,5,6,5,5,10,2,7,1,8,6,3,11,10,9,4,9,1,12,3,5,9,7,8,0,16,10,3,7,1,10,16,9,5 118 0.986170 1 chr7 65967731 65968076 - GUSB, chr7 65967997 65968104 h38_mk_AluJo + 1 SRR1399779, 117 97,21,140,66,45,62,66,92,72,130,35,52,50,68,70,35,85,69,87,37,38,75,134,69,54,42,86,40,34,112,76,119,37,52,49,37,59,35,43,109,76,78,41,55,67,71,64,66,86,67,87,55,54,67,59,48,106,115,57,59,37,40,97,65,113,73,52,21,63,92,66,77,65,51,42,36,94,101,42,54,39,95,93,53,49,104,52,63,73,53,52,30,80,49,67,48,50,69,61,85,9,60,40,248,162,133,85,129,87,138,78,54,106,89,85,56,110 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr7 66130127 66130248 + ASL,CRCP, chr7 66130088 66130411 h38_mk_AluSc8 - 25 SRR1072367,SRR1084842,SRR1333741,SRR1340508,SRR1348159,SRR1356619,SRR1408208,SRR1414897,SRR1416754,SRR1442571,SRR600361,SRR607337,SRR613627,SRR614802,SRR1099499,SRR1341763,SRR1348360,SRR1381673,SRR1389979,SRR1418127,SRR1421177,SRR1464373,SRR1476571,SRR1487194,SRR1498550, 92 4,0,0,5,1,4,1,2,2,0,4,5,0,2,0,0,6,1,0,1,1,1,11,1,4,2,4,1,1,3,5,6,1,0,1,3,0,1,2,2,0,3,3,1,2,7,3,2,2,2,0,2,2,3,0,4,5,1,2,6,4,1,0,0,6,1,2,2,5,2,4,3,3,0,2,5,1,0,2,3,2,2,1,4,7,1,1,0,5,1,1,0,3,0,1,1,4,1,4,6,0,3,1,0,5,1,3,0,3,4,0,4,0,5,4,3,0 106 5,5,3,7,3,7,3,2,4,3,6,0,3,1,3,3,3,4,1,0,5,0,8,1,4,5,4,3,3,3,5,1,0,2,2,1,0,4,4,3,1,2,6,4,0,5,3,1,1,5,2,2,3,2,3,4,3,2,1,4,2,0,0,10,3,5,1,4,5,1,2,1,5,0,2,2,3,1,1,1,4,2,1,2,7,5,2,3,9,2,5,1,4,5,1,4,11,3,2,2,0,5,3,15,2,7,2,2,2,0,7,6,2,8,9,6,5 118 0.197389 1 chr7 66382237 66382431 - LINC00174, chr7 66382275 66382471 h38_mk_AluJb + 3 SRR1331579,SRR607337,SRR658307, 95 3,0,1,2,0,2,4,3,1,8,1,2,1,3,4,3,3,0,1,2,4,6,6,1,2,1,1,2,0,3,5,0,0,1,4,2,0,0,1,2,1,6,2,1,3,1,0,4,3,0,3,0,3,3,3,2,0,3,4,1,0,1,0,0,2,4,1,4,7,5,3,0,3,1,3,7,9,2,0,7,2,1,4,0,6,1,5,1,2,5,1,2,2,5,4,1,5,3,4,2,1,5,2,0,2,2,0,3,10,8,0,0,1,1,2,6,2 21 0,0,0,0,0,1,0,0,0,0,2,0,0,0,2,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,4,0,0,3,0,3,0,0,0,1,2,0,0 . . . chr7 66531791 66531871 - AC006001.3, chr7 66531815 66531878 h38_mk_AluSx3 + 30 SRR1084842,SRR1085495,SRR1099499,SRR1316940,SRR1317344,SRR1326179,SRR1333741,SRR1348159,SRR1348360,SRR1356619,SRR1387264,SRR1387809,SRR1408368,SRR1416754,SRR1418127,SRR1432123,SRR1435775,SRR1440986,SRR1455925,SRR1474777,SRR1500868,SRR595926,SRR600361,SRR602314,SRR607337,SRR613627,SRR661973,SRR662233,SRR818210,SRR821602, 78 2,0,0,3,2,3,0,1,0,1,1,1,0,1,2,1,1,2,2,0,2,0,7,0,0,2,2,2,0,1,3,0,2,0,5,0,2,1,0,0,3,1,3,4,0,1,2,3,0,0,4,1,1,2,0,0,4,0,1,4,1,1,0,0,3,1,0,0,1,0,1,3,1,0,1,3,1,0,0,1,0,2,1,2,1,1,2,2,0,2,1,0,2,0,2,2,4,0,0,2,0,2,1,0,4,6,0,3,5,5,1,4,2,0,1,3,1 40 0,0,2,1,1,2,0,0,0,2,1,0,0,1,2,0,0,2,0,0,0,0,0,0,0,1,3,1,0,0,4,0,3,0,0,1,0,0,0,0,4,2,0,0,0,0,0,1,1,0,0,0,1,3,1,0,6,0,0,0,0,5,0,0,4,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,1,2,0,1,2,3,0,0,0,0,1,0,1,0,0,0,0,0,0,0,9,1,0,0,0,0,1,2 . . . chr7 66551520 66551849 - AC006001.3, chr7 66551804 66552039 h38_mk_AluJb + 1 SRR1415234, 5 1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 21 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,3,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,1,0,2,0,0,1,0,0,0,0,0,0,0,2,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,2,0,1,0,0,1,0,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0 105 0.078106 0 chr7 66551525 66551849 - AC006001.3, chr7 66551804 66552039 h38_mk_AluJb + 1 SRR1413562, 12 0,0,1,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 21 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,3,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,1,0,2,0,0,1,0,0,0,0,0,0,0,2,0,2,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,2,0,1,0,0,1,0,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0 106 0.091229 0 chr7 66713325 66713468 + RABGEF1, chr7 66713120 66713437 h38_mk_AluYc - 1 SRR1399779, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 28 0,0,2,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,3,2,0,0,0,2,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,2,0,1,0,0,0,0,2,0,0,0,0,0,0,1,1,0,0,0,1,0,0,1,2,2,0,6,1,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,4,0 . . . chr7 66713328 66713468 + RABGEF1, chr7 66713120 66713437 h38_mk_AluYc - 2 SRR1471943,SRR602704, 9 0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,4,0,0,1,0,2,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 28 0,0,2,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,3,2,0,0,0,2,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,2,0,1,0,0,0,0,2,0,0,0,0,0,0,1,1,0,0,0,1,0,0,1,2,2,0,6,1,0,0,2,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,4,0 46 0.497723 0 chr7 67339450 67339573 + LINC01372,STAG3L4, chr7 67339421 67339604 h38_mk_AluJ4 - 48 SRR1084649,SRR1316940,SRR1320115,SRR1337412,SRR1341365,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1367943,SRR1386708,SRR1402900,SRR1413562,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1435775,SRR1440986,SRR1444622,SRR1447693,SRR1453851,SRR1457482,SRR1464373,SRR1468955,SRR1471943,SRR1487362,SRR1487685,SRR1500868,SRR602704,SRR604262,SRR607337,SRR613627,SRR657754,SRR658307,SRR661349,SRR662233,SRR662534,SRR1328895,SRR1356444,SRR1368772,SRR1415234,SRR1455925,SRR1468514,SRR1474777,SRR1498550,SRR818210, 91 1,0,5,2,1,2,0,1,2,2,2,1,3,4,1,1,1,4,0,0,0,2,1,2,1,1,2,0,2,6,3,5,0,1,3,2,1,4,2,3,0,2,1,1,0,3,4,0,6,0,2,3,2,2,1,1,10,0,3,2,1,2,0,2,3,1,2,4,3,1,6,0,6,1,1,4,2,5,0,2,1,1,1,0,2,3,1,0,4,5,4,0,0,0,1,0,2,7,2,2,0,6,0,0,1,4,0,6,4,3,2,1,2,4,1,3,0 88 0,4,3,0,1,1,0,1,2,1,3,2,2,1,0,1,0,0,4,0,3,1,1,1,0,1,2,0,0,2,4,7,1,1,3,1,5,0,0,5,0,4,2,2,1,4,1,0,5,1,4,1,2,1,3,2,0,2,2,1,3,5,0,3,8,1,5,0,9,0,3,1,4,4,1,4,2,3,1,1,0,3,5,1,0,3,4,2,4,3,0,1,1,2,3,1,3,4,3,4,0,2,0,0,0,2,2,10,1,0,1,3,0,0,0,2,2 . . . chr7 72901031 72901128 + POM121, chr7 72900981 72901159 h38_mk_AluJ - 1 SRR1386708, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 40 0,0,0,1,1,0,0,0,2,0,1,0,0,0,1,0,0,3,0,0,1,0,0,1,0,3,0,0,2,0,0,0,1,0,0,1,0,0,0,2,1,0,1,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,2,0,1,0,0,0,0,0,2,1,0,0,0,2,0,0,1,0,0,0,3,1,0,0,0,0,1,1,0,1,0,2,0,0,1,0,2,4,0,1,0,0,1,1,0,0,0,0,0,0,0,0,1,0,1,2,1,0 116 0.021871 0 chr7 72952152 72952295 - NSUN5P2, chr7 72952187 72952353 h38_mk_AluSp + 66 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1415234,SRR1416477,SRR1435020,SRR1435775,SRR1439873,SRR1440986,SRR1444678,SRR1453851,SRR1455925,SRR1457482,SRR1457503,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1487194,SRR1488651,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR607337,SRR614802,SRR657635,SRR657754,SRR661973,SRR662233,SRR663633,SRR814967,SRR818210, 115 11,6,15,11,3,16,19,6,19,9,15,9,4,12,12,10,10,13,3,1,8,17,19,8,26,11,9,12,4,14,6,12,11,10,8,7,14,8,3,34,9,9,11,2,26,7,21,5,7,5,10,16,7,12,7,6,19,12,8,7,5,8,7,8,29,16,0,7,12,12,12,12,8,14,3,9,24,15,4,11,8,19,2,13,11,6,5,15,17,11,29,2,20,6,10,15,12,7,1,15,0,18,2,4,12,31,6,18,14,25,14,17,8,23,30,7,7 111 20,0,8,29,18,22,42,14,12,20,28,17,9,19,21,13,15,14,8,11,15,7,33,16,18,18,21,10,18,11,15,18,6,16,1,8,7,15,5,21,7,33,0,17,26,9,21,10,21,21,10,19,10,0,17,12,29,11,23,12,2,9,8,9,29,15,3,2,21,21,20,14,19,15,8,14,19,17,3,18,23,20,15,29,18,14,18,6,19,7,26,2,25,15,6,22,12,2,7,20,0,20,12,2,35,15,0,13,26,25,34,19,5,41,29,26,0 118 0.642655 1 chr7 73553548 73553669 - BCL7B, chr7 73553382 73553702 h38_mk_AluSc8 + 106 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 1,1,15,20,16,6,7,11,19,7,17,10,5,10,14,11,21,18,6,6,19,9,56,7,18,19,24,6,27,9,6,9,6,15,9,16,13,21,2,15,23,9,9,18,9,16,18,7,8,8,2,10,7,8,11,8,12,7,19,26,21,14,13,33,22,6,8,10,10,5,13,8,20,7,6,14,10,14,5,17,8,9,11,17,16,14,8,2,7,9,15,1,9,11,13,12,14,4,13,19,3,5,6,5,23,9,5,6,23,9,20,16,6,13,12,22,2 114 1,2,8,12,6,9,1,4,7,5,9,5,7,6,8,4,6,10,2,1,6,3,41,6,12,9,16,4,11,8,4,13,1,14,4,7,13,10,0,10,8,2,4,12,7,4,12,6,5,10,3,9,6,2,2,1,13,2,8,12,13,9,6,13,12,2,7,8,6,5,8,2,12,11,7,9,5,3,3,6,9,5,6,7,12,7,1,2,9,4,12,4,4,6,1,8,4,5,5,9,0,3,2,0,4,13,4,6,16,2,7,8,2,13,10,21,5 118 0.204431 1 chr7 74214822 74214940 + LAT2, chr7 74214792 74214947 h38_mk_AluJb - 28 SRR1072367,SRR1084649,SRR1102055,SRR1314163,SRR1316940,SRR1326179,SRR1331579,SRR1335446,SRR1360128,SRR1386708,SRR1387264,SRR1415234,SRR1416477,SRR1434526,SRR1435293,SRR1444622,SRR1457482,SRR1471943,SRR1487194,SRR1487362,SRR1487685,SRR602314,SRR604456,SRR607337,SRR614802,SRR657635,SRR818033,SRR821602, 87 10,0,5,1,2,2,11,5,1,2,1,3,0,0,2,5,29,2,7,1,0,3,2,1,4,3,2,0,1,1,0,1,9,0,4,1,2,0,0,2,8,1,2,3,2,2,2,0,0,1,4,4,2,2,0,1,1,1,1,0,5,0,0,4,1,2,5,0,0,0,2,0,1,2,2,0,1,2,0,1,1,0,0,0,1,20,8,1,5,2,4,1,2,3,2,2,2,0,26,1,0,0,5,0,2,4,1,9,0,0,2,9,4,3,9,4,8 55 3,0,1,1,1,0,3,2,0,2,0,0,0,0,5,0,8,0,1,1,2,0,1,0,3,0,0,0,2,0,0,1,2,0,0,0,0,0,0,1,1,2,0,1,1,1,0,0,0,2,2,1,0,1,0,0,1,0,1,0,3,0,1,0,0,0,1,1,1,0,0,0,0,3,1,0,1,0,0,1,0,0,0,0,1,5,3,0,1,0,0,1,0,0,2,2,0,0,9,1,0,1,1,0,11,0,0,0,0,3,0,1,3,0,7,0,2 105 0.660194 0 chr7 74214822 74215010 + LAT2, chr7 74214792 74214947 h38_mk_AluJb - 33 SRR1072367,SRR1084649,SRR1102055,SRR1314163,SRR1316940,SRR1318163,SRR1326179,SRR1331579,SRR1335446,SRR1337412,SRR1341763,SRR1342045,SRR1348159,SRR1360128,SRR1368772,SRR1387264,SRR1415234,SRR1416477,SRR1434526,SRR1444622,SRR1453851,SRR1487362,SRR1487685,SRR600361,SRR602704,SRR604456,SRR614802,SRR657635,SRR657754,SRR658307,SRR662534,SRR818033,SRR821602, 87 10,0,5,1,2,2,11,5,1,2,1,3,0,0,2,5,29,2,7,1,0,3,2,1,4,3,2,0,1,1,0,1,9,0,4,1,2,0,0,2,8,1,2,3,2,2,2,0,0,1,4,4,2,2,0,1,1,1,1,0,5,0,0,4,1,2,5,0,0,0,2,0,1,2,2,0,1,2,0,1,1,0,0,0,1,20,8,1,5,2,4,1,2,3,2,2,2,0,26,1,0,0,5,0,2,4,1,9,0,0,2,9,4,3,9,4,8 87 5,0,6,1,1,3,14,1,0,6,1,2,0,1,2,0,19,1,11,0,5,5,0,1,1,7,4,0,1,1,2,6,7,0,2,2,2,0,0,4,2,3,0,0,1,1,2,0,2,2,1,2,3,0,0,2,3,2,2,1,2,2,1,3,3,1,4,1,3,1,4,2,2,0,1,2,1,0,0,4,1,0,0,3,0,13,5,0,0,1,0,1,3,0,0,1,3,1,9,1,0,2,3,0,4,4,1,12,1,2,0,6,0,3,8,3,8 109 0.739369 0 chr7 75412789 75412932 + NSUN5P1, chr7 75412731 75412897 h38_mk_AluSp - 86 SRR1084649,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320963,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1418837,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR607337,SRR613627,SRR614802,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 111 16,0,9,31,21,21,45,14,15,22,35,18,8,21,22,14,1,14,9,10,18,9,34,13,17,18,22,10,19,12,16,20,5,15,1,9,8,19,5,22,7,34,0,19,29,10,16,10,19,17,10,20,10,0,18,10,31,11,24,12,2,8,8,10,30,17,3,1,20,21,21,14,17,15,8,13,20,17,3,20,22,16,16,29,22,13,18,4,17,8,19,2,26,20,8,20,12,2,8,20,0,23,15,2,34,11,0,13,25,24,34,22,4,36,30,35,0 115 1,2,12,2,11,3,10,6,15,10,7,10,1,10,12,1,18,13,4,2,3,11,14,7,12,10,7,15,8,10,9,6,5,7,6,7,2,9,6,11,10,14,8,16,12,2,9,10,4,14,4,3,1,5,5,2,8,6,8,6,11,6,6,15,14,11,6,7,22,7,15,10,14,10,1,8,6,8,1,7,5,8,5,14,4,11,10,6,12,2,21,3,5,8,3,16,7,7,1,10,0,9,2,0,9,11,2,9,11,17,10,7,5,12,9,9,5 116 0.617934 0 chr7 75412789 75413042 + NSUN5P1, chr7 75412731 75412897 h38_mk_AluSp - 1 SRR1399779, 111 16,0,9,31,21,21,45,14,15,22,35,18,8,21,22,14,1,14,9,10,18,9,34,13,17,18,22,10,19,12,16,20,5,15,1,9,8,19,5,22,7,34,0,19,29,10,16,10,19,17,10,20,10,0,18,10,31,11,24,12,2,8,8,10,30,17,3,1,20,21,21,14,17,15,8,13,20,17,3,20,22,16,16,29,22,13,18,4,17,8,19,2,26,20,8,20,12,2,8,20,0,23,15,2,34,11,0,13,25,24,34,22,4,36,30,35,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 110 0.134098 0 chr7 76108435 76108762 - GTF2IP7, chr7 76108465 76108557 h38_mk_AluYj4 + 1 SRR661973, 20 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,4,0,1,0,1,0,0,0,0,0,0,0,0,0,0,1,0,1,1,2,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,2,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,1,0,0,0,1,0,3,0 32 1,0,0,0,1,1,0,1,0,1,0,0,0,0,1,2,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,2,1,0,1,0,0,1,0,0,0,1,0,2,2,0,1,2,1,1,0,0,0,1,1,0 . . . chr7 76618497 76618615 - POMZP3, chr7 76618330 76618644 h38_mk_AluSz + 3 SRR1340508,SRR1418127,SRR1487685, 6 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 32 3,0,0,0,5,0,1,0,0,0,0,0,0,0,0,0,0,5,0,0,4,0,8,0,0,0,0,0,0,0,0,4,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,0,0,0,0,1,2,0,0,0,1,0,0,0,0,1,1,0,2,1,0,0,0,0,0,4,0,3,0,0,4,1,2,0,3,0,0,0,0,2,0,0,1,0,0,0,0,2,0,0,0,1,1,0,0,0,0,1,8,2,0,0,0 118 0.013353 1 chr7 77662646 77662897 - APTR, chr7 77662673 77662953 h38_mk_AluSx + 1 SRR1468514, 21 0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,2,3,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,2,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,3,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr7 817280 817499 + SUN1, chr7 817124 817386 h38_mk_AluJo - 1 SRR1317344, 9 0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,2,0 84 0,2,1,3,0,1,3,2,0,0,5,0,0,0,1,0,1,1,2,0,2,4,3,1,0,4,2,1,2,3,1,1,2,1,2,3,3,0,0,1,2,3,1,2,0,1,1,2,1,1,2,0,1,0,1,1,2,1,0,0,3,1,0,0,1,1,1,0,2,1,0,2,2,0,0,3,2,1,0,1,0,0,1,3,1,2,0,4,1,1,2,0,1,1,4,1,0,3,0,1,0,5,1,9,7,1,1,0,1,4,1,1,0,2,1,1,5 . . . chr7 87860072 87860169 - SLC25A40, chr7 87859904 87860233 h38_mk_AluSx3 + 90 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1315970,SRR1317344,SRR1318163,SRR1326179,SRR1328895,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1354446,SRR1356444,SRR1356619,SRR1360128,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1414897,SRR1416477,SRR1416754,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1435020,SRR1435293,SRR1439873,SRR1440986,SRR1442571,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 104 1,0,2,14,6,6,9,1,2,0,3,8,1,0,9,12,0,6,1,1,11,1,15,3,5,6,5,4,2,2,1,1,6,2,3,5,7,5,0,9,3,6,4,7,7,6,8,1,4,4,1,6,3,0,4,4,5,0,3,4,9,3,2,15,9,4,2,4,4,4,10,1,5,2,6,5,16,3,1,14,7,4,3,9,7,6,4,0,2,2,12,0,4,8,8,11,13,4,1,9,0,5,5,0,4,3,0,16,8,12,29,15,0,12,5,21,1 107 4,0,2,22,6,12,12,0,4,2,6,6,3,8,12,15,5,7,0,3,15,1,24,6,13,10,12,2,9,2,5,2,4,3,0,13,13,3,2,8,12,12,4,9,4,8,9,2,1,3,0,7,4,5,7,5,6,3,3,5,9,4,0,9,7,6,0,3,1,2,8,1,12,6,6,6,12,1,0,17,9,5,1,11,10,9,5,1,6,5,12,2,7,13,15,11,14,5,3,5,1,3,11,0,4,6,2,3,14,13,16,23,0,24,11,19,2 116 0.609837 0 chr7 90305968 90306085 + CFAP69, chr7 90305922 90306210 h38_mk_AluJb - 3 SRR1386708,SRR657754,SRR661973, 47 0,0,0,1,2,3,1,0,0,0,5,1,0,3,1,2,0,0,0,0,4,1,0,3,2,0,0,0,0,0,0,3,0,1,0,0,0,0,0,2,1,2,0,4,0,3,3,0,0,0,0,0,0,4,2,0,6,1,0,0,0,2,2,0,1,0,0,0,2,0,0,0,4,3,0,0,4,2,1,0,0,1,0,0,0,4,4,1,0,0,0,0,0,0,5,1,2,0,0,2,0,0,0,0,7,6,0,7,0,8,0,0,0,3,0,0,0 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,4,11,0,0,0,0,0,0,0 110 0.185072 0 chr7 92492172 92492286 + GATAD1, chr7 92492142 92492476 h38_mk_AluJb - 1 SRR814967, 7 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,3,0,0,0 17 0,0,0,0,0,0,0,3,0,0,0,1,0,0,1,0,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,3,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,3,0,0,0 . . . chr7 94597930 94598004 - SGCE, chr7 94597717 94598037 h38_mk_AluSq2 + 13 SRR1077405,SRR1335446,SRR1402900,SRR1408368,SRR1415234,SRR1418837,SRR1442571,SRR1468514,SRR1474553,SRR1476571,SRR1500868,SRR661349,SRR663633, 79 0,3,0,2,2,1,0,2,1,3,1,0,1,0,1,0,2,0,3,0,0,1,5,0,5,1,2,0,1,0,3,5,0,1,1,0,4,4,1,1,1,1,1,0,2,3,1,4,2,2,2,0,1,3,3,1,3,0,0,0,2,2,1,1,1,3,3,0,1,1,0,0,1,0,2,1,4,1,1,0,6,2,4,1,3,1,2,1,0,2,2,0,0,2,1,1,0,2,0,0,0,3,0,0,3,0,0,1,3,8,0,1,2,2,2,0,0 81 0,3,0,3,3,4,0,2,1,4,5,1,2,2,0,0,4,1,3,0,0,0,6,3,2,2,3,1,1,0,1,3,0,0,1,0,4,1,1,0,1,3,0,1,2,4,1,4,3,0,4,0,1,2,4,1,5,0,1,0,2,1,3,4,2,5,3,0,4,2,2,0,0,2,1,2,3,0,2,0,6,0,8,3,0,1,0,0,3,4,2,0,0,0,0,1,2,3,0,1,0,3,0,4,4,1,0,2,5,4,0,2,4,4,1,1,2 118 0.018122 1 chr7 99030885 99031000 + AC004893.2,TRRAP, chr7 99030865 99030993 h38_mk_AluJ - 47 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1316940,SRR1320115,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1360563,SRR1361567,SRR1375571,SRR1387264,SRR1402900,SRR1408208,SRR1413562,SRR1415234,SRR1433796,SRR1435020,SRR1435775,SRR1439873,SRR1444678,SRR1457503,SRR1468514,SRR1474777,SRR1487194,SRR1487685,SRR1498550,SRR595926,SRR601500,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR657635,SRR657777,SRR661349,SRR662233,SRR818033,SRR818210,SRR821602,SRR1318163,SRR1476571, 66 3,0,2,4,3,4,1,0,1,3,0,1,3,0,1,0,1,0,0,2,0,0,5,0,2,1,2,0,0,0,2,0,0,2,1,0,0,2,0,1,1,0,0,0,0,3,1,0,2,1,1,0,2,0,0,0,1,3,0,3,2,2,0,3,1,1,0,2,0,0,0,0,0,0,2,1,1,0,0,1,0,1,2,0,1,0,1,0,1,0,3,0,1,1,1,2,3,1,3,3,0,2,0,0,2,0,2,0,1,4,2,0,0,1,4,1,1 115 8,1,6,7,6,1,6,7,2,7,1,3,5,1,1,8,5,5,2,4,2,3,14,4,4,2,7,2,2,2,4,5,2,4,4,4,1,2,1,3,8,1,3,5,4,2,6,2,3,3,4,3,1,4,2,5,1,4,5,4,1,4,8,2,4,3,4,4,0,3,3,6,1,6,3,6,3,2,2,4,1,7,2,3,7,3,6,2,3,2,2,2,1,2,4,5,4,7,7,4,1,4,1,0,3,1,1,6,3,4,3,2,1,3,4,4,8 . . . chr7 99377358 99377439 + ARPC1B, chr7 99377298 99377621 h38_mk_AluSx - 1 SRR1414897, 40 1,0,0,1,0,0,1,0,1,1,2,0,0,0,1,1,3,0,2,0,0,0,0,0,0,1,2,0,0,0,0,0,2,0,0,0,0,0,0,0,2,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,2,1,0,0,0,0,0,0,0,2,0,0,0,2,0,0,1,0,1,0,0,0,0,1,0,0,1,2,2,0,3,0,1,1,1,0,0,0,1,0,2,0,0,2,4,0,3,1,0,0,0,0,1,0,0,1,0,0,0 69 2,0,1,1,1,0,3,4,1,1,0,0,0,0,2,0,6,0,1,1,1,2,1,1,1,1,0,0,1,0,1,1,3,0,1,0,1,0,1,0,3,2,1,1,0,1,1,0,1,1,0,0,1,1,0,1,0,2,0,3,1,4,0,0,2,1,0,0,0,0,0,3,0,2,2,1,1,0,0,0,0,0,0,2,2,5,3,0,3,0,1,3,2,0,2,0,1,1,2,1,0,3,0,0,3,1,0,0,2,1,0,5,0,3,0,1,4 118 0.058485 1 chr7 99377358 99377455 + ARPC1B, chr7 99377298 99377621 h38_mk_AluSx - 5 SRR1331579,SRR1414897,SRR1454803,SRR599510,SRR614802, 40 1,0,0,1,0,0,1,0,1,1,2,0,0,0,1,1,3,0,2,0,0,0,0,0,0,1,2,0,0,0,0,0,2,0,0,0,0,0,0,0,2,1,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,2,1,0,0,0,0,0,0,0,2,0,0,0,2,0,0,1,0,1,0,0,0,0,1,0,0,1,2,2,0,3,0,1,1,1,0,0,0,1,0,2,0,0,2,4,0,3,1,0,0,0,0,1,0,0,1,0,0,0 93 7,0,4,3,1,2,22,4,3,8,3,6,2,1,5,1,15,3,5,0,3,1,6,3,2,3,2,0,0,2,1,5,3,1,1,4,0,0,1,2,5,3,0,2,0,4,2,1,3,4,4,2,2,1,1,1,1,0,1,2,0,1,0,1,1,0,3,2,0,0,0,4,2,2,1,3,0,0,1,1,2,0,4,4,3,3,7,0,9,2,4,3,1,3,14,2,4,4,7,5,0,11,3,0,6,2,1,4,0,0,6,5,0,1,6,5,5 118 0.117061 1 chr7 99447773 99448040 + CPSF4, chr7 99447580 99447919 h38_mk_AluY - 3 SRR1415234,SRR1432123,SRR1434526, 74 0,0,6,0,0,2,1,0,1,1,0,0,2,1,1,0,0,7,0,1,0,5,3,0,4,0,3,0,4,6,0,2,2,2,3,0,6,2,2,0,0,4,4,3,2,1,1,1,3,2,4,3,3,3,2,3,3,3,1,3,10,0,6,0,4,2,0,6,1,1,0,4,4,0,4,0,5,2,4,0,2,7,4,0,2,3,0,2,3,4,4,0,0,0,0,0,2,3,4,1,0,2,0,0,5,0,0,0,0,0,0,1,4,0,2,2,0 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.050252 1 chr7 99470201 99470324 - ATP5J2, chr7 99470158 99470356 h38_mk_AluJo + 2 SRR1084842,SRR602314, 57 3,2,0,5,0,1,3,0,5,9,0,0,4,0,6,0,1,0,0,0,3,0,14,0,0,3,2,4,0,2,10,3,0,9,0,0,0,0,0,0,0,2,1,2,2,3,0,1,0,0,1,0,0,0,1,0,3,0,2,0,5,2,3,7,2,1,0,4,0,0,1,3,7,0,8,0,11,5,0,0,0,3,3,4,0,2,0,0,0,0,2,0,4,0,7,0,0,3,0,3,0,3,0,5,0,0,0,0,0,0,8,5,0,7,3,0,0 5 0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr8 100300528 100300651 - RNF19A, chr8 100300367 100300694 h38_mk_AluJ + 28 SRR1072367,SRR1085495,SRR1318163,SRR1331579,SRR1335446,SRR1337412,SRR1340508,SRR1360563,SRR1375571,SRR1387264,SRR1416754,SRR1418837,SRR1421177,SRR1435293,SRR1439873,SRR1444678,SRR1447693,SRR1457503,SRR1468514,SRR1485459,SRR1487362,SRR1487685,SRR602516,SRR607337,SRR613627,SRR614802,SRR658307,SRR661973, 102 11,0,0,6,5,1,7,1,1,3,5,6,3,2,3,6,2,3,6,4,5,8,6,0,3,7,4,0,5,5,5,2,2,4,2,3,3,8,1,2,9,6,3,5,0,1,5,3,3,5,2,1,1,1,3,11,4,0,3,3,8,4,0,6,5,4,5,3,9,5,4,4,4,3,4,3,3,2,0,7,5,0,4,7,1,10,5,0,1,3,3,3,5,8,9,4,6,2,2,4,0,3,10,0,3,9,0,3,3,6,4,4,0,4,5,6,0 59 4,0,1,0,1,0,0,0,0,0,4,1,0,2,1,0,1,0,2,2,2,2,1,0,1,0,1,1,0,0,1,0,1,2,0,0,0,3,0,0,4,0,0,1,0,2,1,0,2,0,1,0,1,0,2,6,1,0,0,1,2,0,0,2,1,0,0,1,2,1,0,0,0,0,3,1,3,0,0,0,0,1,1,6,0,3,7,1,1,1,1,0,1,0,1,3,0,0,0,1,0,2,3,0,0,0,0,5,1,2,0,0,0,0,1,0,0 108 0.911587 0 chr8 100532356 100532460 - ANKRD46, chr8 100532174 100532484 h38_mk_AluJ + 85 SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1402900,SRR1408208,SRR1408368,SRR1416477,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 104 0,1,3,15,8,8,9,5,3,3,13,6,5,3,8,4,4,7,4,0,11,4,17,7,7,3,7,3,7,0,6,1,0,3,2,3,10,7,1,9,12,4,4,14,2,5,11,3,1,6,2,6,1,3,5,6,8,3,6,4,6,5,0,11,3,0,0,2,5,3,12,1,17,4,2,10,13,1,2,8,5,13,0,17,9,4,3,2,2,7,10,0,4,14,12,17,16,2,3,8,0,9,6,0,14,5,1,2,6,9,21,11,0,22,16,15,0 96 3,0,0,13,7,5,12,4,1,4,11,5,2,1,13,9,4,11,0,2,8,0,26,6,7,2,2,1,2,3,6,0,0,9,0,7,10,11,0,3,7,3,4,19,0,13,8,4,0,1,1,5,0,1,5,2,10,1,7,3,6,6,1,14,3,0,2,2,5,3,7,2,12,2,0,9,17,4,2,13,5,4,1,12,7,3,3,2,0,1,11,0,3,17,7,20,18,0,2,8,0,5,4,0,2,7,0,5,9,7,18,10,0,16,9,9,0 118 0.143086 1 chr8 101202333 101202447 - ZNF706, chr8 101202149 101202495 h38_mk_AluS7 + 114 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 51,15,111,93,66,77,78,100,117,58,80,43,51,90,86,72,52,98,29,36,67,34,159,59,47,32,98,60,76,79,118,111,15,92,58,69,52,79,21,107,85,86,56,106,98,105,91,33,82,43,69,49,58,46,40,38,92,74,58,104,44,33,53,71,99,51,30,36,78,52,71,97,77,51,31,62,93,66,30,68,62,72,50,87,85,103,50,44,21,49,61,8,57,56,59,65,76,57,34,90,3,91,31,84,83,134,40,64,59,102,73,87,47,82,86,86,21 117 11,5,19,38,21,18,16,13,31,16,22,10,21,27,39,20,17,39,11,3,19,18,61,13,22,12,34,21,25,17,30,32,7,26,14,14,38,10,9,35,26,15,13,32,28,23,35,7,10,10,24,13,13,17,12,13,33,20,10,36,23,13,19,35,32,15,9,6,24,15,36,11,40,19,10,24,36,29,9,30,12,34,7,25,37,35,16,8,13,14,27,1,16,19,35,35,26,14,17,23,1,25,9,7,27,32,7,22,18,44,32,63,10,29,27,34,21 118 0.465050 1 chr8 103489697 103489849 - AC012213.1, chr8 103489758 103490071 h38_mk_AluJ4 + 22 SRR1084842,SRR1099499,SRR1102055,SRR1314163,SRR1317344,SRR1337098,SRR1341763,SRR1348159,SRR1348360,SRR1354446,SRR1387809,SRR1399779,SRR1408208,SRR1413562,SRR1416477,SRR1432123,SRR1440986,SRR1464373,SRR602704,SRR662233,SRR814967,SRR818210, 55 0,0,2,5,1,3,3,4,2,0,5,2,1,1,0,2,0,3,1,0,2,0,0,0,4,0,8,1,3,2,3,3,0,0,0,0,0,0,0,0,0,5,0,1,3,4,2,0,3,1,0,2,0,0,0,1,2,0,0,0,0,0,0,2,2,1,0,1,3,0,0,0,4,0,0,1,0,0,0,0,4,3,0,1,11,0,0,0,0,0,5,0,2,0,0,0,2,0,3,3,0,2,0,0,9,0,0,0,0,19,7,8,0,5,0,7,0 52 0,0,0,4,0,9,6,6,0,0,4,0,0,0,1,0,3,0,0,0,3,0,6,2,4,0,10,2,7,0,1,0,0,3,1,0,2,0,0,0,0,4,0,7,4,0,5,0,1,1,0,3,0,0,0,2,11,0,1,1,1,0,3,0,5,0,0,0,0,3,1,1,1,2,0,1,4,0,0,9,0,0,1,0,0,4,4,0,0,0,0,0,3,3,5,0,5,0,0,0,0,0,3,0,0,0,0,0,0,0,10,0,0,6,10,4,0 87 0.828195 0 chr8 11864376 11864463 - CTSB, chr8 11864187 11864515 h38_mk_AluJb + 113 SRR1077405,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 116 25,5,19,97,22,52,158,31,36,20,67,19,28,25,64,52,106,48,13,4,72,15,348,24,28,51,56,25,64,16,30,27,32,31,15,27,53,30,7,30,40,35,25,48,20,44,54,13,15,14,6,24,14,13,21,31,40,11,33,61,33,28,10,44,29,18,13,11,35,18,43,31,106,18,15,62,91,31,9,64,32,83,18,45,58,54,46,9,57,21,50,6,37,54,35,41,93,11,35,29,3,34,18,0,39,27,15,7,49,73,49,71,8,74,62,75,19 117 22,9,24,87,30,60,167,39,34,19,71,27,27,22,78,64,146,35,40,14,47,24,327,25,35,41,60,30,61,21,33,29,55,50,16,27,40,54,9,32,43,53,46,48,21,51,43,17,21,20,5,31,9,12,28,42,33,20,39,48,31,30,15,86,37,22,20,8,37,18,33,35,105,31,25,70,87,32,10,83,50,67,17,57,60,60,52,8,81,18,43,10,27,43,25,32,57,20,26,31,2,34,20,13,55,33,11,32,59,60,76,62,9,56,58,79,32 118 0.306080 1 chr8 12202482 12202570 + AC145124.1, chr8 12202454 12202530 h38_mk_AluJb - 1 SRR1326179, 115 5,23,7,9,4,13,12,5,8,15,11,14,5,2,2,12,1,5,3,6,5,9,20,0,12,3,5,2,7,17,9,3,4,7,6,10,5,10,4,21,10,12,5,13,20,3,5,7,1,5,11,4,2,5,5,4,11,13,8,5,14,1,8,12,6,8,6,7,5,3,10,9,8,3,6,7,11,7,9,6,4,7,3,7,12,3,5,2,10,4,15,1,4,4,15,10,6,14,6,12,3,11,4,3,7,28,5,1,5,7,8,13,0,18,15,6,8 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr8 12202482 12202620 + AC145124.1, chr8 12202454 12202530 h38_mk_AluJb - 2 SRR1341763,SRR613627, 115 5,23,7,9,4,13,12,5,8,15,11,14,5,2,2,12,1,5,3,6,5,9,20,0,12,3,5,2,7,17,9,3,4,7,6,10,5,10,4,21,10,12,5,13,20,3,5,7,1,5,11,4,2,5,5,4,11,13,8,5,14,1,8,12,6,8,6,7,5,3,10,9,8,3,6,7,11,7,9,6,4,7,3,7,12,3,5,2,10,4,15,1,4,4,15,10,6,14,6,12,3,11,4,3,7,28,5,1,5,7,8,13,0,18,15,6,8 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr8 12444756 12444894 + AC145124.1,FAM66A,FAM66D, chr8 12444728 12444804 h38_mk_AluJb - 17 SRR1326179,SRR1341763,SRR1367943,SRR1471943,SRR613627,SRR821602,SRR1340508,SRR1418837,SRR1320115,SRR1333741,SRR1399779,SRR1435775,SRR1453851,SRR1455925,SRR1464373,SRR602516,SRR657754, 117 21,104,17,46,52,62,23,41,16,73,35,56,44,25,52,40,16,53,25,12,39,62,270,15,83,26,50,30,49,55,36,62,21,50,26,51,43,39,34,165,33,65,38,58,70,35,115,25,18,19,86,44,11,33,26,34,60,59,63,38,51,33,31,127,86,46,47,42,17,31,58,16,70,33,34,36,76,37,29,69,46,59,25,29,53,22,35,20,56,13,68,4,61,31,60,52,67,44,38,53,6,50,10,21,60,88,19,51,24,109,115,54,29,142,96,138,17 117 14,101,17,28,23,20,30,27,9,73,25,55,32,18,31,16,21,28,12,14,22,61,158,20,86,24,21,23,34,34,33,33,16,25,15,35,61,28,14,77,21,54,30,38,60,33,22,25,16,25,80,33,11,30,19,19,44,41,34,26,39,18,23,58,58,33,33,38,16,29,18,20,42,25,12,22,59,23,20,37,24,68,22,16,42,27,29,12,64,16,53,1,47,17,29,54,36,32,24,40,4,33,11,32,52,62,15,27,24,91,54,42,21,90,53,61,10 . . . chr8 12444782 12444894 + FAM66D, chr8 12444728 12444804 h38_mk_AluJb - 2 SRR1453851,SRR1464373, 54 0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,1,1,1,0,1,0,1,10,0,1,0,0,1,1,0,1,2,0,1,2,2,1,0,0,5,1,1,1,4,0,0,3,1,0,0,1,1,0,0,0,0,0,0,1,0,0,2,0,1,4,1,0,4,1,0,4,0,2,0,0,1,0,1,0,0,1,2,0,3,1,2,0,0,0,0,2,0,0,0,0,4,0,1,0,1,0,0,0,6,0,0,0,10,0,1,2,4,0,3,2,1,0 117 14,101,17,28,23,20,30,27,9,73,25,55,32,18,31,16,21,28,12,14,22,61,158,20,86,24,21,23,34,34,33,33,16,25,15,35,61,28,14,77,21,54,30,38,60,33,22,25,16,25,80,33,11,30,19,19,44,41,34,26,39,18,23,58,58,33,33,38,16,29,18,20,42,25,12,22,59,23,20,37,24,68,22,16,42,27,29,12,64,16,53,1,47,17,29,54,36,32,24,40,4,33,11,32,52,62,15,27,24,91,54,42,21,90,53,61,10 . . . chr8 143288253 143288596 + ZNF696, chr8 143288243 143288536 h38_mk_AluSx - 1 SRR1340508, 4 0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr8 143303366 143303467 - TOP1MT, chr8 143303377 143303495 h38_mk_AluJb + 1 SRR1487194, 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 18 0,0,0,2,1,0,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,0,0,0,2,0,3,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0 38 0.166667 0 chr8 143590608 143590738 - EEF1D, chr8 143590613 143590924 h38_mk_AluY + 8 SRR1387264,SRR1413562,SRR1418837,SRR1434526,SRR1457503,SRR601500,SRR602704,SRR662534, 113 16,3,9,2,2,5,0,15,1,14,1,11,1,6,11,5,9,4,5,2,4,13,17,4,5,5,11,7,7,18,8,2,4,2,5,1,6,5,8,8,14,4,2,8,7,2,4,6,10,2,13,4,2,6,12,3,12,16,10,4,7,2,4,6,12,9,10,2,11,1,9,7,7,8,6,3,4,0,6,1,4,6,11,6,5,11,7,6,11,9,2,0,10,4,1,0,5,3,7,9,1,11,2,8,7,4,1,2,4,15,3,4,3,6,7,3,1 104 7,7,6,0,1,2,4,6,1,5,1,5,2,1,7,1,3,2,0,4,2,7,9,6,7,3,4,6,3,3,2,3,2,1,2,2,2,3,4,7,8,7,6,4,1,2,2,3,7,1,1,2,2,4,8,0,1,3,5,4,7,0,0,2,6,4,4,1,6,2,3,4,1,6,8,1,4,3,3,1,2,3,5,4,2,5,1,5,11,3,2,0,5,4,3,0,6,1,1,3,0,3,1,0,8,0,0,5,4,3,2,5,0,1,3,3,0 118 0.157789 1 chr8 143590645 143590738 - EEF1D, chr8 143590613 143590924 h38_mk_AluY + 2 SRR661349,SRR662534, 92 7,1,2,1,5,1,3,1,1,5,0,1,1,1,6,2,4,6,0,3,2,6,6,1,1,2,6,0,1,2,6,1,3,3,3,0,2,0,4,5,5,6,2,2,1,3,2,2,5,2,4,1,1,2,0,2,1,3,0,3,2,2,1,3,3,0,4,2,0,0,1,3,0,0,0,2,1,1,3,2,2,4,4,6,4,3,0,3,14,2,3,0,4,2,3,0,1,3,2,7,0,3,0,0,2,0,0,1,7,0,0,8,0,1,1,2,0 104 7,7,6,0,1,2,4,6,1,5,1,5,2,1,7,1,3,2,0,4,2,7,9,6,7,3,4,6,3,3,2,3,2,1,2,2,2,3,4,7,8,7,6,4,1,2,2,3,7,1,1,2,2,4,8,0,1,3,5,4,7,0,0,2,6,4,4,1,6,2,3,4,1,6,8,1,4,3,3,1,2,3,5,4,2,5,1,5,11,3,2,0,5,4,3,0,6,1,1,3,0,3,1,0,8,0,0,5,4,3,2,5,0,1,3,3,0 . . . chr8 143686917 143687014 + ZNF707, chr8 143686864 143687180 h38_mk_AluSp - 2 SRR1099499,SRR1468514, 16 0,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 32 0,0,0,1,2,1,0,0,1,0,0,0,0,1,4,0,1,0,0,0,0,0,1,0,0,2,0,1,0,0,0,0,1,0,0,0,0,1,0,1,0,2,0,0,1,1,0,1,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,2,3,0,0,1,0,0,0 114 0.049626 0 chr8 143687994 143688067 + ZNF707, chr8 143687956 143688198 h38_mk_AluY - 5 SRR1326179,SRR1331579,SRR1402900,SRR661349,SRR662233, 48 1,0,0,0,2,3,0,0,0,0,1,0,0,2,2,0,5,0,0,0,0,0,0,2,0,2,1,1,0,0,0,0,1,0,1,0,0,0,0,1,0,3,0,1,2,1,1,1,0,1,1,0,0,0,0,0,1,0,1,2,2,0,1,1,1,1,0,1,0,0,0,1,0,0,0,0,2,4,0,0,0,3,1,0,0,1,0,0,0,0,0,0,2,1,0,0,2,0,0,0,0,1,0,0,2,1,0,3,2,0,4,0,0,1,2,0,0 49 0,1,0,0,0,1,1,0,0,2,1,0,0,0,1,3,4,0,0,0,1,0,0,3,0,2,2,0,3,2,0,0,0,0,1,1,0,0,0,1,0,1,0,1,0,2,1,1,0,2,0,2,0,1,0,0,0,0,1,0,0,1,0,0,1,1,0,0,0,0,1,0,1,0,1,0,0,0,0,0,1,2,1,1,0,0,1,0,1,0,0,2,1,0,0,0,3,0,0,1,0,2,1,0,0,0,0,1,1,0,2,1,0,3,0,0,0 . . . chr8 144437649 144437746 + TONSL-AS1, chr8 144437593 144437915 h38_mk_AluSx - 1 SRR1348159, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 55 1,0,0,0,0,0,1,0,0,1,1,2,0,0,2,1,3,2,0,0,1,0,3,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,3,2,0,1,1,0,0,0,0,1,0,1,0,1,0,1,4,0,0,2,2,0,1,3,0,1,1,0,1,0,1,2,1,0,2,1,2,1,1,2,0,0,0,0,1,1,1,1,0,0,0,0,0,2,2,0,0,0,0,1,1,0,0,1,3,3,1,0,5,1,1,0 . . . chr8 144437699 144437746 + TONSL-AS1, chr8 144437593 144437915 h38_mk_AluSx - 1 SRR1333741, 22 0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,1,0,0,0,0,1,0,1,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,1,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0 55 1,0,0,0,0,0,1,0,0,1,1,2,0,0,2,1,3,2,0,0,1,0,3,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,3,2,0,1,1,0,0,0,0,1,0,1,0,1,0,1,4,0,0,2,2,0,1,3,0,1,1,0,1,0,1,2,1,0,2,1,2,1,1,2,0,0,0,0,1,1,1,1,0,0,0,0,0,2,2,0,0,0,0,1,1,0,0,1,3,3,1,0,5,1,1,0 . . . chr8 144438228 144438333 + TONSL-AS1, chr8 144438196 144438366 h38_mk_AluJb - 15 SRR1331579,SRR1333741,SRR1340508,SRR1348159,SRR1387264,SRR1402900,SRR1413562,SRR1432123,SRR1435775,SRR1440986,SRR1468514,SRR1471943,SRR657754,SRR661973,SRR814967, 55 1,0,0,0,0,0,1,0,0,1,1,2,0,0,2,1,3,2,0,0,1,0,3,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,2,0,0,0,0,3,2,0,1,1,0,0,0,0,1,0,1,0,1,0,1,4,0,0,2,2,0,1,3,0,1,1,0,1,0,1,2,1,0,2,1,2,1,1,2,0,0,0,0,1,1,1,1,0,0,0,0,0,2,2,0,0,0,0,1,1,0,0,1,3,3,1,0,5,1,1,0 95 1,1,1,6,3,0,0,3,2,3,8,1,1,2,3,2,3,9,1,0,1,0,11,3,5,2,4,2,2,1,2,2,0,3,2,4,1,1,0,4,6,2,2,3,3,5,4,3,4,2,3,0,3,2,1,1,4,2,1,0,1,3,1,2,3,1,1,2,2,2,0,2,10,0,1,4,4,3,0,5,1,5,0,2,2,5,1,0,0,2,4,0,3,0,1,2,2,0,1,1,0,2,2,1,8,4,1,0,9,11,3,5,0,2,2,0,0 . . . chr8 19457530 19457816 - CSGALNACT1, chr8 19457321 19457642 h38_mk_AluSx1 + 63 SRR1084649,SRR1084842,SRR1099499,SRR1314163,SRR1316940,SRR1317344,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1337098,SRR1340508,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1356619,SRR1361567,SRR1368772,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1416477,SRR1416754,SRR1418837,SRR1432123,SRR1434526,SRR1435293,SRR1437538,SRR1440986,SRR1442571,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1455925,SRR1468955,SRR1476571,SRR1485459,SRR1487194,SRR1487685,SRR1488651,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR604262,SRR604456,SRR607337,SRR613627,SRR657777,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210, 108 10,0,11,30,4,16,2,14,2,11,7,1,0,20,34,11,29,16,6,3,11,3,47,0,18,11,27,9,7,1,29,1,3,1,23,17,5,2,0,23,15,32,4,19,4,70,11,38,4,1,6,4,5,9,29,0,15,0,17,1,13,0,6,1,27,17,45,14,14,8,12,3,17,2,4,8,11,8,0,3,1,2,31,10,24,5,59,2,3,2,14,7,16,19,18,10,2,7,11,44,1,12,5,0,5,5,13,3,4,98,17,13,2,18,18,9,4 91 3,0,7,8,5,14,0,7,0,8,2,0,0,9,30,7,16,5,1,0,4,0,26,1,6,7,7,3,0,1,12,1,0,0,6,3,3,1,1,5,5,20,1,8,2,35,2,23,0,0,4,3,5,5,13,0,6,0,6,0,4,0,3,1,8,13,18,3,6,6,6,0,14,0,1,0,1,6,0,1,0,0,15,3,16,0,39,7,1,0,9,3,5,11,9,1,2,5,7,16,1,9,3,0,1,2,13,0,1,42,9,8,4,5,8,3,1 118 0.276547 1 chr8 19587876 19588023 - CSGALNACT1, chr8 19587909 19588236 h38_mk_AluSq2 + 2 SRR1341763,SRR1360128, 25 0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,1,0,0,0,0,0,0,0,1,1,0,0,0,0,1,1,0,0,0,0,1,0,3,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,1,0,1,0 36 1,1,0,0,0,0,0,1,0,0,0,0,0,0,1,2,1,0,1,0,1,0,2,0,1,0,0,1,0,0,2,0,3,0,1,0,0,0,1,0,0,1,0,0,1,0,0,0,1,0,0,0,0,2,0,1,0,0,1,0,0,0,1,4,0,0,0,0,0,0,0,1,1,0,1,0,1,0,0,0,0,0,0,1,0,0,5,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,2,0,4,1,0,0,0,0,0,0,0,2,0,0,0 101 0.267426 0 chr8 22390730 22390847 + SLC39A14, chr8 22390696 22390876 h38_mk_AluJ - 1 SRR1084649, 2 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 30 1,0,1,1,0,0,0,0,0,0,0,0,0,1,0,1,16,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,1,0,6,3,0,7,0,0,0,0,3,9,1,2,2,0,2,0,0,0,0,1,0,0,0,2,0,0,1,0,0,7,0,0 . . . chr8 23247987 23248197 + CHMP7, chr8 23248002 23248122 h38_mk_AluJo - 1 SRR1442571, 4 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 8 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.004625 1 chr8 37473078 37473210 - AC091182.2,LINC01605, chr8 37473170 37473421 h38_mk_AluJ + 31 SRR1368772,SRR1432123,SRR1468514,SRR1487362,SRR814967,SRR818210,SRR1084649,SRR1102055,SRR1314163,SRR1340508,SRR1342045,SRR1348159,SRR1354446,SRR1367943,SRR1390601,SRR1421177,SRR1440986,SRR1444678,SRR1454803,SRR1455925,SRR1457482,SRR1464373,SRR1474553,SRR1485459,SRR1487194,SRR595926,SRR602516,SRR657635,SRR658307,SRR661973,SRR662534, 89 0,0,8,12,5,4,1,22,1,3,1,1,0,2,0,2,8,1,1,0,5,0,15,2,0,3,3,3,10,1,0,0,0,7,1,3,4,2,0,1,2,7,1,4,4,1,4,0,1,0,1,0,0,3,1,3,7,1,2,5,2,1,0,8,3,0,0,3,7,5,4,5,5,3,2,3,7,1,3,3,5,2,0,2,4,6,3,0,0,0,2,2,2,2,1,4,2,2,3,1,0,0,2,0,6,0,2,1,2,2,1,4,0,4,3,8,0 47 3,0,1,0,0,0,3,10,3,0,0,1,0,1,0,1,0,0,2,0,0,0,11,0,2,2,2,0,4,0,0,1,0,0,0,2,6,0,0,0,1,0,0,2,0,0,0,0,0,2,0,0,0,0,0,1,1,0,0,0,0,0,0,3,2,0,1,1,0,0,0,7,3,2,0,5,2,0,0,0,2,0,0,1,2,2,1,0,0,0,2,0,0,0,0,10,0,0,0,0,0,1,0,0,3,1,0,1,0,3,0,2,0,4,0,3,3 91 0.990110 0 chr8 38544084 38544150 - AC069120.1, chr8 38544052 38544382 h38_mk_AluJ + 1 SRR1340508, 17 0,0,0,2,0,0,0,0,0,0,9,0,0,2,0,0,0,0,0,0,0,0,2,0,1,0,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,1,3,0,0,0,0,0,4,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,6,0,0,2,0,0,0 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,2,0,3,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 . . . chr8 42329124 42329499 + IKBKB, chr8 42329308 42329504 h38_mk_AluSz6 - 1 SRR1341763, 117 34,41,50,27,14,31,22,25,27,78,31,24,24,28,39,17,42,19,50,7,35,41,102,22,41,67,51,14,20,32,28,37,12,21,25,23,19,19,21,26,50,40,16,27,27,46,45,31,29,25,32,21,36,26,27,24,42,8,30,33,18,19,17,29,48,29,18,25,41,30,31,19,26,23,23,21,46,24,22,35,15,33,25,27,33,40,36,20,29,30,35,21,31,21,50,27,35,24,44,43,6,30,22,14,39,54,46,35,23,38,33,28,28,36,24,31,47 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.928793 1 chr8 6624896 6625037 + MCPH1, chr8 6624865 6625184 h38_mk_AluSx1 - 3 SRR1340508,SRR1348360,SRR1454803, 66 0,0,0,4,2,0,2,2,1,1,1,0,2,1,2,2,0,3,0,1,1,2,10,0,2,0,0,2,0,0,2,2,0,0,0,0,0,1,1,0,0,3,0,0,1,0,3,1,0,0,4,1,2,2,1,0,0,0,2,1,1,1,4,4,1,0,0,1,0,0,0,3,0,3,0,0,3,2,1,0,1,1,0,0,2,4,1,1,0,0,2,0,1,1,1,2,3,0,0,4,0,2,5,0,0,1,0,0,1,0,6,2,1,0,1,1,0 7 0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 117 0.082368 0 chr8 73795791 73795914 - UBE2W, chr8 73795801 73796094 h38_mk_AluJb + 1 SRR607337, 15 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,2,0,0,0,0,2,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,1,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0 30 0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,1,0,1,0,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,1,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,1,3,1,0,3,0,0,0,0,1,0,0,2,0,0,0,1,0,2,4,2,0 118 0.010963 1 chr8 73955647 73955765 - ELOC, chr8 73955613 73955795 h38_mk_AluSx + 1 SRR595926, 50 0,0,0,14,0,0,0,0,0,4,11,0,0,7,0,0,0,11,0,9,0,0,0,0,3,3,14,0,16,0,9,24,0,11,0,0,15,0,0,11,16,0,5,19,7,0,23,10,4,0,0,8,0,8,0,13,0,0,0,0,4,0,0,0,23,8,0,0,0,10,0,0,0,0,0,0,0,11,0,0,4,19,0,17,0,14,0,0,0,0,16,1,9,0,6,15,8,10,0,20,0,18,0,0,0,0,0,11,15,12,8,0,0,0,9,21,11 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,4,0,0,0,0,0,0,0,0,0,8,0,9,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,0 118 0.009892 1 chr8 73979079 73979171 + TMEM70, chr8 73979033 73979338 h38_mk_AluSz - 116 SRR1072367,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1389979,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1444678,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1468955,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR607337,SRR612563,SRR613627,SRR614802,SRR657127,SRR657635,SRR657754,SRR657777,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210,SRR821602, 117 30,11,72,100,82,47,111,143,86,16,91,35,37,11,67,55,98,64,21,9,74,13,272,36,75,40,78,63,109,31,49,64,43,98,33,74,93,33,4,82,80,70,41,70,73,32,105,24,11,58,10,59,24,32,37,71,78,27,43,64,69,88,41,91,60,28,13,35,50,40,98,67,110,39,9,70,91,37,13,69,64,52,8,105,111,116,22,2,61,14,70,3,44,68,59,132,87,29,43,74,6,74,31,53,87,57,19,50,42,77,135,101,15,112,149,107,10 116 31,0,97,109,82,48,117,145,76,20,72,47,41,22,60,56,111,66,10,10,69,23,265,52,53,44,81,56,95,46,61,68,25,88,44,64,99,34,8,84,76,59,38,54,61,36,116,26,19,70,11,52,24,25,28,68,85,36,50,65,62,73,31,91,66,27,10,34,50,49,80,85,105,32,12,58,77,49,23,82,63,69,12,96,86,90,17,5,48,14,70,5,61,85,76,144,99,48,54,108,3,73,32,59,60,82,16,51,49,120,142,111,28,119,141,112,24 118 0.586450 1 chr8 8242316 8242432 + FAM86B3P, chr8 8242271 8242598 h38_mk_AluSz6 - 2 SRR1414897,SRR1416754, 11 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,2,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0 18 0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,3,0,0,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,3,3,1,0,0,2,0,0,0,4,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0 62 0.198541 0 chr8 88873693 88873817 + AC090568.2, chr8 88873666 88873856 h38_mk_AluJb - 3 SRR1333741,SRR1487194,SRR661349, 52 0,0,0,9,0,3,4,0,3,0,1,0,1,0,3,2,0,3,1,0,0,0,0,1,1,0,3,0,0,1,0,3,0,4,0,0,0,0,0,0,3,0,1,10,2,3,0,0,0,3,1,0,0,0,0,2,0,0,0,2,0,1,0,2,0,2,0,0,0,0,1,0,7,3,0,0,0,0,0,6,0,4,0,1,4,1,0,0,0,1,1,0,1,1,2,4,2,0,0,0,0,1,4,0,3,0,1,0,3,9,0,0,0,6,2,2,0 50 0,0,0,5,1,1,8,0,0,1,2,0,1,1,2,0,0,3,0,0,1,0,7,4,4,0,0,1,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,3,0,2,2,0,0,3,0,1,0,0,0,2,1,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,4,2,0,0,2,0,0,4,0,0,1,0,7,1,0,0,0,1,1,0,3,0,1,2,2,0,1,1,0,2,0,0,0,2,2,0,3,0,0,1,0,2,0,2,0 . . . chr8 93724510 93724595 + FAM92A, chr8 93724326 93724601 h38_mk_AluJb - 41 SRR1085495,SRR1328895,SRR1331579,SRR1337098,SRR1341365,SRR1348159,SRR1348360,SRR1354446,SRR1356619,SRR1357478,SRR1360563,SRR1381673,SRR1387264,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1416477,SRR1416754,SRR1421177,SRR1432123,SRR1437538,SRR1439873,SRR1440986,SRR1442571,SRR1444622,SRR1453851,SRR1464373,SRR1476571,SRR1487362,SRR1487685,SRR1498550,SRR600361,SRR601500,SRR602704,SRR613627,SRR661349,SRR662233,SRR662534,SRR814967,SRR818210, 93 0,0,2,1,3,3,0,0,3,4,1,3,0,0,3,4,2,3,2,0,2,0,4,2,1,1,2,2,3,0,3,4,1,4,1,1,2,0,4,1,2,4,0,0,2,3,2,3,0,1,1,2,1,0,0,5,4,1,1,4,1,1,7,5,2,3,1,2,3,1,2,2,2,1,1,4,3,2,3,4,0,4,5,2,1,5,5,0,2,1,1,1,2,7,0,1,7,1,1,0,0,2,1,0,4,2,0,2,2,3,9,4,0,6,1,5,0 108 1,0,2,4,7,3,1,5,0,4,5,2,2,1,2,5,2,7,0,1,5,3,6,4,4,3,2,3,6,2,6,4,3,7,1,1,3,5,3,3,8,1,2,3,5,6,3,1,5,2,0,2,2,5,1,3,3,0,1,3,4,4,4,8,5,2,4,1,3,6,5,3,6,3,2,3,1,2,1,6,1,3,4,3,4,8,3,0,1,2,5,0,2,4,3,5,4,7,2,3,0,3,4,0,2,8,4,1,2,11,5,5,2,11,9,5,3 118 0.060595 1 chr8 93759860 93759993 + TMEM67, chr8 93759632 93759957 h38_mk_AluSp - 2 SRR1390601,SRR613627, 27 0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,1,0,0,0,1,1,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,1,0,1,0,0,0,2,1,0,1,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,2,0,0,0,0,0,0,0,1,0,0,0,4,0,0,0 16 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,1,0,0,0,1,0,0,0,1,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0 94 0.177787 0 chr8 94866158 94866353 + INTS8, chr8 94866278 94866594 h38_mk_AluJo - 1 SRR1453851, 117 41,11,25,35,34,20,25,33,39,36,15,15,31,23,32,17,40,24,15,16,22,18,73,22,20,23,32,29,25,18,21,22,13,34,13,11,29,28,7,31,24,26,20,17,32,13,27,20,24,21,18,9,19,20,14,21,35,15,19,26,23,26,28,28,25,18,14,11,15,20,36,16,29,14,14,24,29,19,6,35,19,17,20,37,34,27,17,2,21,16,23,5,19,25,27,45,22,25,28,31,1,36,16,9,53,47,11,40,24,104,47,19,28,39,34,41,27 31 0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,2,0,2,0,1,0,0,1,1,1,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,2,0,1,1,1,1,1,0,0,0,0,2,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,1,1,0,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,2,1,0,0 . . . chr8 94866158 94866441 + INTS8, chr8 94866278 94866594 h38_mk_AluJo - 1 SRR1476571, 117 41,11,25,35,34,20,25,33,39,36,15,15,31,23,32,17,40,24,15,16,22,18,73,22,20,23,32,29,25,18,21,22,13,34,13,11,29,28,7,31,24,26,20,17,32,13,27,20,24,21,18,9,19,20,14,21,35,15,19,26,23,26,28,28,25,18,14,11,15,20,36,16,29,14,14,24,29,19,6,35,19,17,20,37,34,27,17,2,21,16,23,5,19,25,27,45,22,25,28,31,1,36,16,9,53,47,11,40,24,104,47,19,28,39,34,41,27 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr8 94866312 94866353 + INTS8, chr8 94866278 94866594 h38_mk_AluJo - 4 SRR1336548,SRR1416754,SRR1457503,SRR1485459, 25 0,0,1,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,1,1,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,3,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,2,0,1,1,0,0,2,0,0,0,0,0,2,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0 31 0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,2,0,2,0,1,0,0,1,1,1,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,2,0,1,1,1,1,1,0,0,0,0,2,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,1,1,0,0,0,1,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,2,1,0,0 118 0.031182 1 chr8 94868692 94868813 + INTS8, chr8 94868690 94868977 h38_mk_AluSz - 72 SRR1084649,SRR1085495,SRR1102055,SRR1315970,SRR1317344,SRR1320115,SRR1326179,SRR1333741,SRR1336548,SRR1340508,SRR1341763,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1357478,SRR1360563,SRR1361567,SRR1375571,SRR1386708,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408368,SRR1414897,SRR1416477,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1434526,SRR1437538,SRR1439873,SRR1440986,SRR1444622,SRR1447693,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1468955,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1488651,SRR1498550,SRR1500868,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR607337,SRR657635,SRR658307,SRR661349,SRR661973,SRR662534,SRR663633,SRR814967,SRR818033,SRR818210, 102 3,0,6,4,2,3,2,2,8,4,2,2,3,1,3,0,3,2,0,1,4,1,5,4,6,0,3,6,1,5,8,7,0,4,1,1,3,2,0,2,0,6,2,4,6,4,2,2,1,5,2,3,2,3,2,5,6,1,2,2,1,0,3,6,7,3,6,0,3,3,1,5,4,4,2,1,3,7,0,3,4,1,3,6,6,9,5,5,6,8,3,2,4,2,2,6,5,5,2,4,0,0,1,0,9,0,5,8,9,10,6,7,3,9,3,3,0 105 0,0,2,2,8,1,3,4,2,1,1,2,1,4,7,5,2,5,1,1,0,0,3,0,1,1,6,2,1,4,6,4,1,4,1,3,1,3,2,3,1,3,0,5,2,2,1,4,0,4,3,6,2,3,4,4,4,4,2,5,2,4,2,2,8,2,3,0,2,4,1,2,3,2,1,7,6,2,1,3,2,2,2,5,9,5,3,2,2,2,1,0,4,4,5,5,7,11,2,4,0,8,0,4,2,2,0,4,3,5,1,2,2,3,8,7,2 118 0.144076 1 chr9 101407239 101407532 + ZNF189, chr9 101407367 101407704 h38_mk_AluJb - 3 SRR1085495,SRR1331579,SRR661349, 11 0,0,0,0,1,0,0,0,0,0,1,1,0,0,0,0,4,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,3,0 90 4,8,3,4,7,3,3,2,1,2,2,1,1,0,1,5,8,2,0,0,1,2,7,6,0,2,1,2,1,1,2,0,1,2,1,3,1,6,0,1,2,1,2,3,0,4,6,2,1,0,12,4,0,1,3,0,0,1,1,1,0,0,0,1,2,2,0,2,1,3,3,2,4,0,0,2,1,2,0,1,0,1,1,7,3,3,0,0,3,1,0,1,2,4,2,3,2,2,1,10,0,5,2,0,0,4,0,9,4,4,6,4,0,3,5,4,3 117 0.139864 0 chr9 101407412 101407532 + ZNF189, chr9 101407367 101407704 h38_mk_AluJb - 46 SRR1084842,SRR1085495,SRR1099499,SRR1316940,SRR1328895,SRR1331579,SRR1333741,SRR1337412,SRR1340508,SRR1342045,SRR1348360,SRR1367943,SRR1375571,SRR1387264,SRR1387809,SRR1390601,SRR1402900,SRR1415234,SRR1418837,SRR1444678,SRR1453851,SRR1454803,SRR1455925,SRR1464373,SRR1468514,SRR1485459,SRR1487194,SRR1498550,SRR599510,SRR600361,SRR601500,SRR602516,SRR602704,SRR604456,SRR607337,SRR614802,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 80 1,2,0,3,2,2,2,1,0,1,1,0,0,0,0,2,4,1,0,0,1,4,2,1,0,5,5,1,2,1,0,0,1,0,0,2,0,1,0,3,3,3,0,1,1,1,0,0,1,0,10,0,0,1,1,2,1,0,2,1,0,2,0,1,0,1,1,2,9,2,1,1,3,0,1,1,2,0,1,0,1,1,0,3,3,0,1,0,2,0,1,2,2,1,2,2,2,0,2,2,0,0,2,0,0,3,9,4,1,7,4,2,5,3,4,1,3 90 4,8,3,4,7,3,3,2,1,2,2,1,1,0,1,5,8,2,0,0,1,2,7,6,0,2,1,2,1,1,2,0,1,2,1,3,1,6,0,1,2,1,2,3,0,4,6,2,1,0,12,4,0,1,3,0,0,1,1,1,0,0,0,1,2,2,0,2,1,3,3,2,4,0,0,2,1,2,0,1,0,1,1,7,3,3,0,0,3,1,0,1,2,4,2,3,2,2,1,10,0,5,2,0,0,4,0,9,4,4,6,4,0,3,5,4,3 117 0.205517 0 chr9 101407431 101407532 + ZNF189, chr9 101407367 101407704 h38_mk_AluJb - 1 SRR1453341, 4 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 90 4,8,3,4,7,3,3,2,1,2,2,1,1,0,1,5,8,2,0,0,1,2,7,6,0,2,1,2,1,1,2,0,1,2,1,3,1,6,0,1,2,1,2,3,0,4,6,2,1,0,12,4,0,1,3,0,0,1,1,1,0,0,0,1,2,2,0,2,1,3,3,2,4,0,0,2,1,2,0,1,0,1,1,7,3,3,0,0,3,1,0,1,2,4,2,3,2,2,1,10,0,5,2,0,0,4,0,9,4,4,6,4,0,3,5,4,3 117 0.135773 0 chr9 112697439 112697556 - INIP, chr9 112697400 112697609 h38_mk_AluJb + 1 SRR1387809, 72 0,1,0,2,0,2,2,1,0,3,0,3,3,0,2,0,1,4,1,1,1,1,3,1,2,1,2,2,1,0,2,0,0,0,0,1,3,0,0,2,2,2,0,0,1,1,1,5,1,0,3,1,0,1,1,0,0,1,1,0,0,1,1,1,1,3,0,0,2,2,3,1,2,1,1,4,3,0,0,1,2,0,0,2,3,2,0,0,1,0,2,0,1,0,0,0,2,3,0,1,0,0,1,0,0,4,0,0,4,3,2,0,0,1,4,5,0 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 112697439 112697582 - INIP, chr9 112697400 112697609 h38_mk_AluJb + 1 SRR1368772, 72 0,1,0,2,0,2,2,1,0,3,0,3,3,0,2,0,1,4,1,1,1,1,3,1,2,1,2,2,1,0,2,0,0,0,0,1,3,0,0,2,2,2,0,0,1,1,1,5,1,0,3,1,0,1,1,0,0,1,1,0,0,1,1,1,1,3,0,0,2,2,3,1,2,1,1,4,3,0,0,1,2,0,0,2,3,2,0,0,1,0,2,0,1,0,0,0,2,3,0,1,0,0,1,0,0,4,0,0,4,3,2,0,0,1,4,5,0 11 0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 118 0.051721 1 chr9 113273329 113273676 - CDC26, chr9 113273637 113273856 h38_mk_AluJ + 1 SRR1381673, 117 118,67,76,86,58,55,79,81,94,158,64,59,53,60,90,60,129,113,74,48,67,79,247,74,114,89,72,55,84,89,47,122,48,105,47,65,104,73,50,102,98,87,63,79,79,82,114,62,86,102,86,51,71,51,53,64,103,87,52,122,85,63,55,101,102,46,62,53,73,61,89,88,91,107,64,68,83,56,73,73,50,125,64,107,101,109,58,55,137,65,128,32,73,66,75,86,70,107,100,109,7,99,54,167,119,108,49,67,60,76,151,89,59,105,114,130,95 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 121283319 121283392 + GSN, chr9 121283276 121283607 h38_mk_AluSz - 9 SRR1336548,SRR1356619,SRR1418127,SRR1435020,SRR1457482,SRR1468514,SRR1476571,SRR1500868,SRR613627, 107 8,1,3,5,6,9,2,13,3,3,0,1,4,8,7,4,15,1,1,4,4,6,17,3,3,3,6,1,1,3,6,0,1,1,5,2,5,3,1,4,14,5,3,3,5,8,9,6,13,0,4,4,1,6,2,2,6,7,8,14,6,3,4,3,10,3,5,5,0,2,3,7,0,13,9,7,20,2,6,3,2,4,16,8,6,3,11,5,11,12,6,1,6,4,12,3,10,8,20,9,1,14,3,0,7,3,0,0,1,9,1,4,2,2,2,0,0 115 11,0,8,3,4,9,5,7,6,13,2,4,9,8,7,3,12,3,4,10,6,9,20,6,4,11,8,2,2,7,10,1,2,2,5,4,8,1,4,7,26,9,2,5,6,10,6,9,8,9,7,2,3,9,15,5,10,4,5,12,7,5,5,3,12,4,12,11,8,8,5,13,1,11,7,7,21,3,3,4,4,6,19,16,6,7,10,3,15,14,9,2,4,5,9,2,10,12,8,9,1,13,1,2,17,3,0,3,2,3,2,5,5,5,13,4,4 118 0.136365 1 chr9 123236830 123236966 - STRBP, chr9 123236842 123237164 h38_mk_AluSz + 12 SRR1072367,SRR1316940,SRR1326179,SRR1336548,SRR1356444,SRR1356619,SRR1375571,SRR1390601,SRR1439873,SRR1447693,SRR1476571,SRR661349, 107 2,2,3,9,3,2,13,3,7,1,6,1,2,1,3,2,6,2,0,1,8,2,24,4,1,0,8,1,5,4,5,1,1,3,2,2,3,3,1,4,5,0,1,3,2,3,10,6,4,4,1,2,2,2,2,4,3,0,5,7,1,4,1,5,4,1,2,1,3,3,3,3,5,3,0,6,7,3,0,7,7,6,1,7,8,3,7,0,0,1,8,0,1,7,3,8,6,2,5,2,2,6,3,1,8,3,3,4,5,9,15,6,0,4,6,4,4 33 1,1,0,0,0,0,0,1,0,2,1,0,0,0,2,0,0,0,0,2,0,0,2,0,1,0,1,0,1,1,2,0,0,0,0,0,0,1,0,0,0,0,0,1,1,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,1,0,0,0,1,0,2,0,0,0,0,1,0,1,1,1,0,0,1,0,0,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,0 116 0.376780 0 chr9 125052446 125052595 - SCAI, chr9 125052287 125052659 h38_mk_AluSq10 + 1 SRR1340508, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 19 0,0,0,0,0,0,0,0,2,1,0,0,0,0,2,0,0,0,0,0,0,0,4,0,0,2,0,0,0,0,0,4,0,2,0,0,1,0,0,0,3,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,3,0,0,0,0,0,0,0,0,3,0,0,3,1,0,0,0,0,0,0,2,3,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 82 0.133740 0 chr9 125295458 125295574 + GAPVD1, chr9 125295420 125295741 h38_mk_AluSz - 9 SRR1314163,SRR1317344,SRR1331579,SRR1356444,SRR1375571,SRR1498550,SRR604456,SRR657635,SRR818033, 18 0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,1,0,0,1,2,0,1,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,1,0,0 65 4,2,0,1,3,2,2,3,1,0,2,1,0,1,3,1,3,0,0,0,0,1,3,0,2,0,2,0,0,2,1,1,2,0,0,0,2,3,1,0,3,0,1,1,0,0,2,1,1,1,1,0,0,1,1,0,1,0,1,1,1,0,0,1,3,0,1,0,4,0,2,0,3,2,0,2,0,0,0,6,1,0,0,3,1,0,0,0,3,1,2,0,1,2,4,1,5,0,1,0,0,0,0,0,4,0,0,0,0,0,0,0,0,5,2,2,1 86 0.627372 0 chr9 128543379 128543684 - AL356481.1, chr9 128543396 128543720 h38_mk_AluS + 1 SRR1485459, 109 5,4,8,7,5,1,1,4,2,4,3,1,5,2,2,0,3,1,0,2,1,2,9,4,3,4,3,1,4,1,1,1,1,2,1,4,7,5,1,2,2,1,0,5,2,1,4,1,6,4,2,1,1,5,1,1,4,2,0,4,6,4,2,1,8,6,3,1,3,0,2,2,3,7,2,2,1,2,5,1,3,3,7,4,5,1,1,1,5,2,3,0,2,2,2,3,2,4,4,4,1,5,1,0,6,0,3,3,4,8,1,4,2,2,3,2,2 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 135464750 135464850 - PPP1R26-AS1, chr9 135464583 135464847 h38_mk_AluSz + 1 SRR1331579, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 87 0,0,1,8,5,3,8,0,4,2,7,0,2,1,1,3,9,3,0,3,3,0,9,2,1,2,1,5,4,1,4,3,0,3,2,0,6,7,0,4,4,3,2,1,4,4,7,1,0,0,1,1,1,0,3,0,1,0,0,1,0,0,3,5,3,1,2,3,1,0,0,3,10,2,0,1,1,1,1,2,4,0,1,8,0,1,1,1,3,0,7,0,5,2,1,17,2,3,2,3,0,5,1,0,0,4,4,0,7,4,4,2,0,8,12,9,0 . . . chr9 136405905 136406202 - SDCCAG3, chr9 136406178 136406491 h38_mk_AluS + 1 SRR1320963, 117 12,4,24,27,10,17,13,24,13,32,24,11,16,16,21,13,42,20,20,6,17,14,53,9,16,17,7,5,15,28,10,23,29,13,10,11,14,14,14,28,18,29,10,24,21,19,11,12,17,13,19,12,7,10,13,9,12,14,18,10,15,20,17,29,17,17,12,7,26,16,20,8,24,20,11,16,22,14,13,17,16,24,14,9,14,17,20,7,25,12,27,9,14,18,14,9,18,9,19,24,2,14,10,17,34,16,16,18,20,27,35,20,7,19,18,23,25 1 0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 136478709 136478830 - SEC16A, chr9 136478544 136478868 h38_mk_AluJo + 2 SRR1331579,SRR1498550, 32 0,0,0,2,2,0,2,0,1,0,0,0,1,0,0,0,5,0,0,0,0,0,0,0,0,0,1,0,1,1,0,1,0,0,0,0,1,0,0,1,1,2,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,2,1,0,0,0,0,0,0,0,1,0,1,0,1,0,1,0,0,0,1,2,0,0,0,3,0,0,0,0,0,0,0,3,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0 22 0,0,0,0,0,0,1,1,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,1,2,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1,2,1,1,0,0,0,1,0,0,0,1,0,1,0,0,1,0,0,0,0,0 113 0.095016 0 chr9 137377074 137377281 - EXD3, chr9 137377159 137377478 h38_mk_AluSx3 + 15 SRR1072367,SRR1328895,SRR1335446,SRR1337098,SRR1387809,SRR1399779,SRR1402900,SRR1408208,SRR1418127,SRR1454803,SRR1457482,SRR604262,SRR657635,SRR661349,SRR818210, 110 3,1,5,7,1,12,3,1,8,12,10,3,0,10,5,7,6,4,2,0,7,4,4,3,3,5,3,10,4,2,2,5,1,3,3,2,0,4,1,17,1,19,7,5,8,18,7,2,4,4,5,6,3,5,2,2,4,7,0,4,3,4,1,9,7,9,4,0,15,3,3,2,8,14,2,3,9,7,0,5,6,5,3,2,3,1,5,7,3,4,4,1,2,2,3,2,14,5,2,4,2,8,3,11,7,17,3,1,12,8,9,6,0,13,3,15,2 25 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,3,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,1,2,4,1,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,2,0,0,1,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0 110 0.972857 0 chr9 137381193 137381246 - EXD3, chr9 137381121 137381451 h38_mk_AluSx + 1 SRR1387809, 11 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,0,2,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 18 0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,3,0,0,0,0,0,0,1,1,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,2,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,0,3 . . . chr9 137558176 137558369 - DPH7, chr9 137558239 137558426 h38_mk_AluJb + 1 SRR1356619, 9 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 11 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0 89 0.080150 0 chr9 137577996 137578131 - DPH7, chr9 137578012 137578176 h38_mk_AluJ + 2 SRR1326179,SRR1416477, 23 0,0,0,3,0,0,0,0,0,0,0,3,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,2,1,0,0,0,2,0,0,0,0,0,3,1,0,1,0,0,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,1,0,0,0,4,0,0,0 11 1,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 116 0.029215 0 chr9 137616062 137616199 - ARRDC1-AS1, chr9 137616077 137616402 h38_mk_AluSz + 2 SRR1314163,SRR1368772, 19 0,0,1,0,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,1,0,2,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,2,1,0,0,1,1,0,2,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0 117 33,16,42,54,41,33,37,62,37,74,31,38,35,38,63,27,47,64,21,18,34,37,141,30,50,26,44,46,41,49,43,58,23,41,23,55,58,40,29,54,51,56,23,44,44,52,60,29,44,48,25,49,19,53,34,35,56,53,41,60,62,29,31,61,68,26,31,33,43,48,54,56,48,49,26,34,74,46,42,40,29,65,52,56,69,40,39,27,78,34,60,11,50,31,31,48,38,52,31,46,7,43,27,64,48,75,28,63,37,66,97,46,26,77,71,61,24 . . . chr9 15888983 15889101 + CCDC171, chr9 15888929 15889248 h38_mk_AluSz - 8 SRR1326179,SRR1331579,SRR1354446,SRR1390601,SRR1432123,SRR595926,SRR661349,SRR818210, 87 0,0,6,5,2,1,3,2,2,0,2,0,3,4,2,2,3,4,1,0,1,0,2,1,0,0,1,0,5,6,7,6,0,5,3,3,0,3,1,2,2,3,3,2,1,3,6,0,2,3,6,3,0,1,1,4,9,2,2,2,0,0,0,4,2,5,4,0,1,2,0,0,5,0,0,5,5,3,1,0,2,3,1,3,1,2,1,0,1,2,7,0,2,5,2,0,4,3,1,3,0,0,0,10,7,4,3,0,6,2,6,5,4,3,2,2,0 10 0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,4,0 98 0.781266 0 chr9 19127919 19128048 - PLIN2, chr9 19127958 19128206 h38_mk_AluJb + 1 SRR1316940, 3 0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 5 0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 22056252 22056387 + CDKN2B-AS1, chr9 22056030 22056376 h38_mk_AluSx3 - 5 SRR1316940,SRR1331579,SRR1433796,SRR1474777,SRR821602, 39 1,0,0,1,0,2,0,0,0,2,0,2,0,0,0,1,2,1,1,0,0,0,0,1,1,0,0,0,0,0,0,0,1,0,1,0,2,0,0,1,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,1,4,1,1,1,2,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,1,0,0,3,0,0,2,1,0,0,0,0,0,3,2,0,1,1,1,0,0,2,0,0,0,0,0,0,0,3,0,0,1,0,0,1,2,0,9 50 0,0,0,1,0,0,2,0,0,6,1,2,1,1,0,1,2,0,0,1,0,0,3,0,2,1,1,0,0,0,1,1,0,0,0,0,1,0,0,1,1,0,0,0,1,1,2,1,1,2,3,1,0,1,1,0,2,3,0,0,0,0,1,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,4,1,0,0,1,0,1,1,0,2,1,1,1,0,0,0,0,0,0,0,0,0,0,3,2,0,0,0,2,1,0,1,0,0,1,4 43 0.947674 0 chr9 2494180 2494302 - VLDLR-AS1, chr9 2494013 2494330 h38_mk_AluSp + 17 SRR1084842,SRR1102055,SRR1331579,SRR1340508,SRR1354446,SRR1356619,SRR1375571,SRR1387264,SRR1399779,SRR1432123,SRR1434526,SRR1439873,SRR1447693,SRR1455925,SRR595926,SRR602516,SRR602704, 82 1,0,0,4,3,2,2,0,2,0,0,0,0,2,6,1,1,1,0,0,3,0,12,1,1,3,3,1,7,0,2,1,1,2,0,2,0,2,0,1,2,3,1,1,1,1,2,0,1,1,0,1,2,1,3,1,6,5,3,0,0,1,0,6,3,1,0,0,5,2,4,1,6,0,1,5,0,1,0,1,2,3,0,2,0,1,0,0,0,1,1,0,0,1,1,1,2,0,0,1,2,1,2,6,7,5,2,0,7,0,5,2,1,4,1,6,1 62 1,0,0,1,1,0,3,1,2,0,1,2,0,0,2,1,1,0,2,0,2,1,2,0,0,0,2,2,1,0,3,2,0,1,0,1,0,1,0,0,1,1,0,1,1,0,1,0,0,0,1,0,1,0,1,0,2,0,3,0,0,1,0,4,0,4,0,0,1,1,0,0,2,0,2,3,3,0,0,1,1,2,0,1,1,0,0,1,0,0,4,0,0,3,0,2,2,0,0,1,0,2,0,20,2,4,1,2,0,0,0,2,0,1,0,0,1 . . . chr9 33540078 33540212 + ANKRD18B, chr9 33540043 33540357 h38_mk_AluSc - 1 SRR604262, 43 1,1,0,0,0,0,0,1,0,2,0,0,2,0,3,0,0,2,0,0,0,0,0,3,0,0,0,0,0,0,0,2,0,0,1,0,0,0,0,0,0,3,0,0,0,0,0,0,1,1,2,2,0,0,3,7,1,0,0,3,0,0,3,0,1,3,1,0,2,0,0,0,0,0,0,0,1,1,0,2,0,0,4,1,0,0,0,3,0,0,0,0,0,2,5,3,0,8,0,3,0,5,3,1,0,0,0,0,4,0,2,0,3,1,0,0,1 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 . . . chr9 34196336 34196458 + UBAP1, chr9 34196307 34196619 h38_mk_AluSq2 - 4 SRR1072367,SRR1390601,SRR1418127,SRR1498550, 62 2,0,3,1,0,0,4,0,1,1,0,0,0,1,3,0,1,1,0,0,0,1,3,0,2,3,3,0,2,0,0,1,0,1,0,2,0,0,0,1,2,0,1,2,0,1,0,1,1,1,1,2,0,3,0,0,3,1,1,1,1,0,0,0,4,0,0,0,1,1,1,1,0,0,1,2,0,1,0,2,0,0,2,2,0,0,0,1,7,2,0,0,2,1,2,1,2,0,1,1,0,1,0,0,1,0,0,0,0,0,0,1,0,2,2,2,0 111 3,0,3,10,5,2,3,5,4,3,6,0,2,4,7,6,7,4,14,3,3,5,7,2,3,1,3,4,0,2,2,7,1,1,5,1,1,1,3,4,2,1,4,8,5,4,2,2,3,3,1,1,3,4,4,4,3,3,3,0,3,3,2,2,3,1,3,0,3,3,7,2,7,3,1,3,5,4,4,1,2,6,2,2,1,5,1,3,6,4,8,0,2,9,6,7,8,3,2,5,1,4,1,7,8,5,1,6,6,1,8,5,2,11,2,6,3 118 0.117536 1 chr9 34216674 34216789 + UBAP1, chr9 34216665 34216894 h38_mk_AluJb - 71 SRR1084649,SRR1084842,SRR1085495,SRR1102055,SRR1315970,SRR1320115,SRR1326179,SRR1328895,SRR1331579,SRR1333741,SRR1336548,SRR1337098,SRR1340508,SRR1342045,SRR1348159,SRR1348360,SRR1356444,SRR1356619,SRR1360563,SRR1367943,SRR1368772,SRR1375571,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1413562,SRR1415234,SRR1416754,SRR1418127,SRR1418837,SRR1421177,SRR1433796,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1447693,SRR1453851,SRR1454803,SRR1455925,SRR1457503,SRR1464373,SRR1468955,SRR1474553,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1498550,SRR1500868,SRR595926,SRR601500,SRR602314,SRR602516,SRR602704,SRR604262,SRR604456,SRR613627,SRR614802,SRR657635,SRR661349,SRR662233,SRR814967,SRR818033,SRR818210, 96 0,0,3,5,6,0,9,2,6,2,0,0,3,1,6,2,4,2,0,3,10,0,15,3,2,3,3,5,3,4,5,1,0,4,0,2,4,8,0,0,6,2,0,3,6,5,2,3,3,2,3,0,3,4,4,5,0,2,2,4,8,4,0,6,3,1,3,2,2,3,4,10,5,2,6,5,2,2,2,5,2,8,2,5,8,4,1,2,2,1,6,0,3,15,2,6,17,3,4,1,0,16,6,0,5,0,1,1,5,1,20,5,0,5,11,8,0 106 6,4,3,10,6,0,9,7,5,3,0,2,4,1,3,5,5,6,0,3,10,1,16,4,4,3,6,4,3,4,6,3,3,8,3,4,4,7,1,4,9,3,7,8,6,6,5,1,4,1,2,2,2,3,5,3,5,2,1,3,16,8,0,13,10,0,4,2,7,1,6,8,4,4,8,4,11,4,1,2,6,2,4,12,6,6,3,0,13,4,3,0,1,10,3,7,14,6,5,4,0,18,4,1,17,0,1,2,12,15,12,3,0,10,19,7,0 118 0.174434 1 chr9 35789358 35789748 + RGP1, chr9 35789321 35789497 h38_mk_AluJ - 3 SRR1317344,SRR1453341,SRR818210, 54 0,0,1,2,0,0,0,3,1,0,1,0,0,2,1,1,2,3,0,0,0,0,9,0,0,0,1,1,2,1,0,2,1,1,0,1,2,1,0,0,0,0,1,0,0,0,2,1,0,1,0,0,1,0,0,2,1,0,0,2,0,5,2,3,1,0,0,0,0,1,2,4,0,0,0,0,3,0,0,0,0,0,0,2,0,5,1,0,0,0,0,2,0,0,1,4,2,0,0,0,0,2,0,0,5,2,3,1,1,0,9,0,0,4,0,1,2 21 0,0,0,0,0,0,0,1,0,0,2,0,0,0,0,0,0,0,0,0,0,0,8,0,1,0,0,1,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,1,0,0,0,0,0,4,2,1,0,0,0,1,0,1,0,4,0,0,0,0,0,0,0,0,1,0,0,0,3,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,1,0,0,0,0,3,0 47 0.704368 0 chr9 3690837 3690959 + RFX3-AS1, chr9 3690819 3690986 h38_mk_AluJo - 1 SRR657777, 106 8,11,5,1,1,3,1,3,2,8,2,0,4,3,3,2,2,2,5,0,3,7,15,3,6,1,1,2,4,3,5,1,1,1,4,1,3,2,2,4,1,10,0,6,2,1,0,3,3,1,11,2,1,3,1,4,6,2,3,3,3,1,2,1,4,2,4,0,9,4,3,1,3,0,4,3,5,0,3,2,4,2,3,2,6,2,4,5,6,2,6,5,2,1,3,0,1,2,2,3,0,0,3,0,4,5,7,5,1,12,6,4,5,6,8,1,2 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0 . . . chr9 37773154 37773469 + TRMT10B, chr9 37773108 37773430 h38_mk_AluJ - 1 SRR1468514, 1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 54 4,0,2,1,1,3,0,2,1,0,0,3,0,1,0,1,0,0,0,1,4,0,3,0,3,1,1,0,0,5,5,0,3,0,0,0,1,0,0,2,0,0,0,1,0,0,4,0,0,4,4,0,0,0,0,3,2,3,2,0,1,0,1,0,5,1,1,0,0,4,0,1,0,0,0,3,2,0,0,4,0,0,2,2,7,3,1,0,2,2,0,0,0,0,0,0,0,0,1,5,0,4,0,0,5,0,1,0,4,0,0,2,0,9,0,0,0 118 0.063841 1 chr9 37773306 37773469 + TRMT10B, chr9 37773108 37773430 h38_mk_AluJ - 13 SRR1084842,SRR1099499,SRR1318163,SRR1342045,SRR1356619,SRR1360128,SRR1435293,SRR1440986,SRR1453341,SRR1471943,SRR1487362,SRR1498550,SRR1500868, 22 0,0,0,1,0,2,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,1,0,0,0,1,0,0,1,0,2,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,3,0,0,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,2,0,0,0,0,0,0,0 54 4,0,2,1,1,3,0,2,1,0,0,3,0,1,0,1,0,0,0,1,4,0,3,0,3,1,1,0,0,5,5,0,3,0,0,0,1,0,0,2,0,0,0,1,0,0,4,0,0,4,4,0,0,0,0,3,2,3,2,0,1,0,1,0,5,1,1,0,0,4,0,1,0,0,0,3,2,0,0,4,0,0,2,2,7,3,1,0,2,2,0,0,0,0,0,0,0,0,1,5,0,4,0,0,5,0,1,0,4,0,0,2,0,9,0,0,0 118 0.074638 1 chr9 37880386 37880748 - SLC25A51, chr9 37880464 37880789 h38_mk_AluSp + 1 SRR1474777, 2 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 112 8,9,13,5,4,5,6,6,3,21,7,5,6,4,9,1,22,5,7,4,4,3,9,3,1,5,10,1,3,7,5,3,4,5,6,4,5,5,5,6,6,22,0,4,3,9,14,6,7,4,5,0,0,3,7,11,7,8,5,4,14,5,1,17,10,2,4,5,2,5,9,4,8,2,8,9,9,0,5,3,2,5,1,11,4,4,8,1,18,14,3,4,2,5,13,12,7,1,14,10,0,6,6,4,7,3,1,2,9,8,3,7,4,5,8,6,7 . . . chr9 37881518 37881631 - SLC25A51, chr9 37881364 37881663 h38_mk_AluJb + 103 SRR1072367,SRR1077405,SRR1084649,SRR1084842,SRR1085495,SRR1099499,SRR1102055,SRR1314163,SRR1315970,SRR1316940,SRR1317344,SRR1318163,SRR1320115,SRR1320963,SRR1326179,SRR1331579,SRR1333741,SRR1335446,SRR1336548,SRR1337098,SRR1337412,SRR1340508,SRR1341365,SRR1341763,SRR1342045,SRR1348159,SRR1348360,SRR1354446,SRR1356444,SRR1356619,SRR1357478,SRR1360128,SRR1360563,SRR1361567,SRR1367943,SRR1368772,SRR1375571,SRR1381673,SRR1386708,SRR1387264,SRR1387809,SRR1390601,SRR1399779,SRR1402900,SRR1408208,SRR1408368,SRR1413562,SRR1414897,SRR1415234,SRR1418127,SRR1418837,SRR1421177,SRR1432123,SRR1433796,SRR1434526,SRR1435020,SRR1435293,SRR1435775,SRR1439873,SRR1440986,SRR1444622,SRR1444678,SRR1453341,SRR1453851,SRR1454803,SRR1455925,SRR1457482,SRR1457503,SRR1464373,SRR1468514,SRR1471817,SRR1471943,SRR1474553,SRR1474777,SRR1476571,SRR1485459,SRR1487194,SRR1487362,SRR1487685,SRR1498550,SRR1500868,SRR595926,SRR599510,SRR600361,SRR601500,SRR602314,SRR602516,SRR602704,SRR604456,SRR607337,SRR613627,SRR614802,SRR657635,SRR657754,SRR658307,SRR661349,SRR661973,SRR662233,SRR662534,SRR814967,SRR818033,SRR818210,SRR821602, 112 8,9,13,5,4,5,6,6,3,21,7,5,6,4,9,1,22,5,7,4,4,3,9,3,1,5,10,1,3,7,5,3,4,5,6,4,5,5,5,6,6,22,0,4,3,9,14,6,7,4,5,0,0,3,7,11,7,8,5,4,14,5,1,17,10,2,4,5,2,5,9,4,8,2,8,9,9,0,5,3,2,5,1,11,4,4,8,1,18,14,3,4,2,5,13,12,7,1,14,9,0,6,6,4,6,3,1,2,9,8,3,7,4,5,8,6,6 116 19,15,14,13,7,14,10,13,5,32,13,4,8,8,17,5,22,17,8,4,12,8,32,4,8,18,10,6,14,6,10,9,4,10,4,12,13,14,9,10,14,22,10,9,11,15,19,13,10,16,20,2,7,9,5,9,9,4,8,3,17,2,4,12,15,3,5,14,10,11,12,9,14,5,4,14,13,7,8,9,8,12,9,22,21,6,11,2,31,14,18,5,6,5,11,15,16,11,19,9,3,10,13,0,11,8,5,11,13,4,14,15,1,11,21,21,7 118 0.998478 1 chr9 38394477 38394565 + ALDH1B1, chr9 38394280 38394591 h38_mk_AluJ - 1 SRR661973, 5 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,1,0 3 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0 111 0.014396 0 chr9 38604153 38604287 - ANKRD18A, chr9 38604008 38604321 h38_mk_AluSc + 1 SRR1415234, 3 0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 39 4,1,0,0,0,0,0,1,0,2,0,0,1,0,2,0,0,2,0,0,0,0,0,3,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,1,1,0,3,2,0,0,3,3,1,0,0,2,0,0,2,0,2,3,1,0,2,0,0,0,0,0,0,0,1,1,0,2,0,0,4,0,0,0,0,5,0,0,0,0,0,0,4,1,0,8,0,3,0,4,3,0,0,0,0,0,4,0,2,0,0,1,0,0,1 . . . chr9 41037649 41037838 + FRG1HP, chr9 41037581 41037783 h38_mk_AluSp - 4 SRR1316940,SRR1387264,SRR1447693,SRR814967, 27 1,0,0,7,0,4,0,0,0,3,7,2,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,2,1,0,0,0,0,2,2,2,0,0,0,0,0,0,0,0,1,0,0,0,4,6,0,2,0,0,0,0,0,1,0,0,0,4,0,2,0,7,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,5,0,0,0,5,0,0,2 18 0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,3,0,0,0,0,0,1,0,0,1,0,0,0,0,0,1,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0 . . . chr9 539516 539633 + KANK1, chr9 539484 539796 h38_mk_AluJo - 8 SRR1317344,SRR1320115,SRR1340508,SRR1408368,SRR1487685,SRR604262,SRR607337,SRR818210, 23 0,0,1,0,0,0,0,0,0,1,2,0,1,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,2,0,0,0,0,0,0,2,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,3,1,0,0,1,0,0,0,0,1,1,2,0,3,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,2,0 86 5,2,1,3,2,0,0,1,1,9,3,2,3,2,2,0,8,0,2,1,0,3,3,0,3,1,1,0,0,2,2,1,3,1,0,0,2,0,0,0,0,1,2,2,1,4,1,4,4,1,11,3,0,2,4,2,2,5,0,1,2,0,2,2,0,1,0,3,1,3,4,1,0,5,0,5,1,1,2,0,1,1,4,5,2,0,8,0,7,2,1,1,0,2,1,0,3,4,2,2,1,3,1,0,1,3,1,0,0,1,0,5,1,0,2,2,2 . . . chr9 65707013 65707152 + CBWD5, chr9 65707016 65707284 h38_mk_AluSz6 - 2 SRR1328895,SRR602704, 38 0,0,0,7,2,2,3,0,0,0,0,0,0,0,0,4,2,0,0,1,2,0,4,0,1,0,1,0,0,0,3,0,0,2,1,5,0,0,0,5,0,0,0,2,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,2,0,0,1,0,3,0,0,0,0,0,0,0,2,0,0,0,3,4,0,4,0,0,0,0,2,4,0,0,0,0,0,0,0,0,0,0,6,0,0,5,0,0,3,0,16,0,0,5,5,4,0,6,0,5,0,3,0 69 0,0,6,7,0,8,11,3,4,0,5,5,0,6,8,6,0,9,0,0,3,0,12,6,0,0,10,0,5,5,12,13,0,9,0,14,0,0,0,10,7,21,0,12,0,11,9,0,3,0,0,7,0,7,0,12,17,0,6,9,1,0,8,7,7,4,0,0,0,16,4,0,0,0,0,5,12,5,0,11,6,0,5,0,8,8,3,0,0,2,15,0,2,4,9,0,10,0,0,0,0,0,4,0,17,16,0,23,10,26,18,6,15,21,6,7,0 . . . chr9 68272992 68273131 + CBWD3, chr9 68272995 68273263 h38_mk_AluSz6 - 9 SRR1356619,SRR1360563,SRR1367943,SRR1387809,SRR1468514,SRR1487362,SRR595926,SRR602704,SRR814967, 57 0,0,0,7,7,3,4,1,5,0,0,0,1,0,5,0,1,0,0,1,1,1,6,0,1,0,4,0,0,2,7,0,0,7,0,7,0,1,0,2,0,4,0,4,0,0,3,0,0,0,0,0,0,4,0,2,7,0,0,1,1,2,0,0,1,1,0,0,0,2,0,2,0,0,0,0,3,6,0,3,0,0,0,2,3,9,0,0,0,3,5,0,0,4,0,3,9,3,0,11,0,4,6,0,11,0,0,4,5,9,1,7,0,3,0,1,0 69 0,0,6,7,0,7,6,3,4,0,3,5,0,5,8,4,0,9,0,0,4,0,11,3,0,0,9,0,3,6,9,12,0,6,0,12,0,0,0,10,5,19,0,10,0,11,8,0,2,0,0,6,0,4,0,9,14,0,5,7,1,0,7,6,7,2,0,0,0,12,3,0,0,0,0,5,8,4,0,6,5,0,4,0,7,9,2,0,0,1,14,0,1,3,8,0,10,0,0,0,0,0,4,0,12,16,0,22,9,26,14,6,12,18,4,7,0 118 0.140441 1 chr9 83920106 83920212 - KIF27, chr9 83919940 83920246 h38_mk_AluJb + 14 SRR1084842,SRR1102055,SRR1316940,SRR1340508,SRR1356619,SRR1387809,SRR1439873,SRR1487362,SRR1498550,SRR602704,SRR613627,SRR662233,SRR814967,SRR818033, 55 2,1,0,1,0,0,2,1,0,2,0,0,2,3,0,0,0,2,0,0,0,0,3,0,2,2,0,0,0,1,1,1,2,0,0,1,2,0,0,2,0,1,1,0,0,1,0,0,0,1,0,0,3,0,1,2,0,0,0,0,1,0,0,1,4,1,2,1,1,0,2,0,2,0,0,1,2,0,0,1,0,1,0,1,0,4,0,2,1,1,0,0,0,0,0,2,1,0,0,2,0,4,0,0,0,0,0,0,1,1,6,0,1,1,1,4,0 109 5,3,7,7,3,3,5,3,6,3,3,6,5,6,11,1,0,8,12,2,3,5,18,6,6,5,1,2,2,10,4,5,2,4,2,5,10,4,3,4,5,15,2,16,4,12,7,2,5,4,0,0,4,1,3,2,9,8,5,2,6,4,5,7,1,3,4,3,2,9,4,3,6,5,7,3,6,6,6,6,4,8,0,4,4,5,8,10,9,7,4,0,3,4,1,1,5,0,0,3,0,4,3,9,10,6,2,4,3,4,7,5,10,15,7,2,7 112 0.956343 0 chr9 83988329 83988404 + RMI1, chr9 83988292 83988613 h38_mk_AluJo - 13 SRR1084842,SRR1102055,SRR1337098,SRR1340508,SRR1356444,SRR1464373,SRR1487194,SRR1487362,SRR602516,SRR607337,SRR657754,SRR662233,SRR662534, 39 1,2,0,2,0,0,6,0,0,2,1,1,0,0,1,0,0,0,0,1,1,0,4,0,0,0,0,0,2,1,0,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,0,1,1,0,1,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,1,0,0,0,0,0,1,0,1,2,1,0,0,0,0,0,0,0,0,0,1,0,0,1,1,0,1,0,0,0,1,0,0,0,8,2,1,0,3,1,1,0 47 3,2,1,2,0,0,2,0,0,1,0,1,1,0,0,1,0,0,0,1,2,0,4,0,1,0,1,1,0,2,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,1,0,0,1,0,0,1,0,0,0,1,0,1,0,0,2,0,0,0,3,0,0,0,1,4,1,0,0,2,0,0,0,2,2,1,5,1,0,1,1,0,0,2,4,0,1,0,1,2,0,5,3,0,0,1,0,0 90 0.469293 0 chr9 88421332 88421556 + SPIN1, chr9 88421304 88421588 h38_mk_AluJb - 1 SRR607337, 9 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,2,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 29 0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,3,1,0,0,0,0,6,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,1,0,2,0,3,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,3,1,0,0,0,0,0,2,0,1,0,2,0,0,0,3,0,0,0,4,1,0,2,0,6,0,0,1,0,1,0,0,0,0,0,2,1,0,0,2,0,0,5,0,4,0,0,0,0,0,0,1,0,0,0,0,0,0,2,0 . . . chr9 97188465 97188599 - ANKRD18CP, chr9 97188320 97188635 h38_mk_AluSc + 3 SRR1084842,SRR1348159,SRR1418837, 20 0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,2,0,1,2,0,0,1,0,0,0,0,0,0,3,1,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,1,0,1,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,1,0,0,0,0,0,9,0,0,0,0,0,0,0,0,0,0,0 26 0,0,1,2,1,0,0,0,1,0,0,0,3,3,0,0,1,3,0,0,0,0,0,0,0,0,4,0,0,1,0,0,0,0,0,0,3,0,0,0,0,0,0,0,1,0,0,0,0,3,2,0,0,3,1,0,3,0,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,3,2,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,4,0,0,0,0,0,0,0,0,0,0 . . .